HEADER HORMONE 29-JUN-17 5WBT TITLE SOLUTION STRUCTURE AND DYNAMICS OF AN ULTRA-STABLE SINGLE-CHAIN TITLE 2 INSULIN ANALOG STUDIES OF AN ENGINEERED MONOMER AND IMPLICATIONS FOR TITLE 3 RECEPTOR BINDING COMPND MOL_ID: 1; COMPND 2 MOLECULE: INSULIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 25-110; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: INS; SOURCE 6 EXPRESSION_SYSTEM: PICHIA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4919 KEYWDS HEAT-STABLE, HORMONE EXPDTA SOLUTION NMR NUMMDL 19 AUTHOR M.D.GLIDDEN,Y.YANG,N.P.WICKRAMASINGHE,M.A.WEISS REVDAT 5 14-JUN-23 5WBT 1 REMARK REVDAT 4 25-DEC-19 5WBT 1 REMARK REVDAT 3 17-JAN-18 5WBT 1 JRNL REVDAT 2 22-NOV-17 5WBT 1 JRNL REVDAT 1 15-NOV-17 5WBT 0 JRNL AUTH M.D.GLIDDEN,Y.YANG,N.A.SMITH,N.B.PHILLIPS,K.CARR, JRNL AUTH 2 N.P.WICKRAMASINGHE,F.ISMAIL-BEIGI,M.C.LAWRENCE,B.J.SMITH, JRNL AUTH 3 M.A.WEISS JRNL TITL SOLUTION STRUCTURE OF AN ULTRA-STABLE SINGLE-CHAIN INSULIN JRNL TITL 2 ANALOG CONNECTS PROTEIN DYNAMICS TO A NOVEL MECHANISM OF JRNL TITL 3 RECEPTOR BINDING. JRNL REF J. BIOL. CHEM. V. 293 69 2018 JRNL REFN ESSN 1083-351X JRNL PMID 29114034 JRNL DOI 10.1074/JBC.M117.808667 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TIME AVERAGED NOE RESTRAINED MOLECULAR REMARK 3 DYNAMICS; TIME AVERAGING FOR RESIDUES 1-5 AND 28-36 ONLY REMARK 4 REMARK 4 5WBT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1000228730. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-13C; U-15N] SINGLE CHAIN REMARK 210 INSULIN SCI-B, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 4D TIME-SHARED NOESY; 3D HNCA; REMARK 210 3D CBCA(CO)NH; 3D HNCO; 3D REMARK 210 HNCACB; 3D HN(CO)CA; 3D HCC- REMARK 210 TOCSY; 3D H(CCO)NH; 3D 1H-15N REMARK 210 TOCSY; 3D (H)CC(CO)NH; 2D 1H-15N REMARK 210 HSQC; 2D 1H-13C HSQC; 2D 1H-13C REMARK 210 HSQC AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, TOPSPIN, X-PLOR REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 98 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 19 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 34 N ARG A 36 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 22 -13.27 -45.56 REMARK 500 1 TYR A 26 -11.55 -161.48 REMARK 500 1 THR A 27 -140.43 58.03 REMARK 500 1 THR A 30 -128.92 -111.19 REMARK 500 1 GLU A 31 -80.76 60.35 REMARK 500 1 PRO A 34 -176.41 -50.35 REMARK 500 1 ARG A 35 -31.87 -19.07 REMARK 500 1 ARG A 36 31.72 72.17 REMARK 500 2 ASN A 3 -90.13 56.68 REMARK 500 2 GLN A 4 -160.55 35.43 REMARK 500 2 GLU A 31 10.19 -62.28 REMARK 500 2 GLU A 32 123.45 106.99 REMARK 500 2 PRO A 34 -147.27 -94.73 REMARK 500 2 ARG A 35 84.06 -63.07 REMARK 500 3 VAL A 2 -96.69 39.65 REMARK 500 3 ASN A 3 -43.63 -139.06 REMARK 500 3 GLN A 4 143.55 -18.28 REMARK 500 3 ARG A 22 -15.07 -43.12 REMARK 500 3 TYR A 26 -22.89 -173.16 REMARK 500 3 THR A 27 168.54 55.72 REMARK 500 3 PRO A 29 -134.91 -48.24 REMARK 500 3 THR A 30 -119.79 9.95 REMARK 500 3 GLU A 31 90.11 3.07 REMARK 500 3 GLU A 32 -129.61 46.58 REMARK 500 3 PRO A 34 -126.06 -67.84 REMARK 500 3 ARG A 36 110.32 45.37 REMARK 500 3 GLN A 41 -61.21 -93.96 REMARK 500 4 ASN A 3 98.70 -49.04 REMARK 500 4 ARG A 22 0.10 -54.66 REMARK 500 4 TYR A 26 -22.74 -173.14 REMARK 500 4 THR A 27 -176.14 49.29 REMARK 500 4 ASP A 28 -171.91 -50.60 REMARK 500 4 THR A 30 -92.75 -66.60 REMARK 500 4 GLU A 31 5.39 57.76 REMARK 500 4 PRO A 34 -117.22 -87.38 REMARK 500 4 ARG A 36 70.22 34.66 REMARK 500 5 VAL A 2 -153.55 32.23 REMARK 500 5 ARG A 22 -17.86 -42.58 REMARK 500 5 TYR A 26 -48.80 -163.14 REMARK 500 5 THR A 27 172.36 53.60 REMARK 500 5 PRO A 29 -83.38 -52.12 REMARK 500 5 THR A 30 4.09 -43.65 REMARK 500 5 GLU A 32 -140.93 13.03 REMARK 500 5 PRO A 34 30.06 -62.98 REMARK 500 5 ARG A 35 123.39 62.14 REMARK 500 6 ASN A 3 70.25 41.29 REMARK 500 6 ARG A 22 -0.96 -58.79 REMARK 500 6 THR A 27 -156.16 -154.73 REMARK 500 6 PRO A 29 -145.03 -68.66 REMARK 500 6 THR A 30 -107.66 14.14 REMARK 500 REMARK 500 THIS ENTRY HAS 176 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30314 RELATED DB: BMRB DBREF 5WBT A 1 30 UNP P01308 INS_HUMAN 25 54 DBREF 5WBT A 37 57 UNP P01308 INS_HUMAN 90 110 SEQADV 5WBT ASP A 28 UNP P01308 PRO 52 CONFLICT SEQADV 5WBT PRO A 29 UNP P01308 LYS 53 CONFLICT SEQADV 5WBT GLU A 31 UNP P01308 INSERTION SEQADV 5WBT GLU A 32 UNP P01308 INSERTION SEQADV 5WBT GLY A 33 UNP P01308 INSERTION SEQADV 5WBT PRO A 34 UNP P01308 INSERTION SEQADV 5WBT ARG A 35 UNP P01308 INSERTION SEQADV 5WBT ARG A 36 UNP P01308 INSERTION SEQADV 5WBT HIS A 44 UNP P01308 THR 97 CONFLICT SEQADV 5WBT GLU A 50 UNP P01308 TYR 103 CONFLICT SEQRES 1 A 57 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 A 57 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 A 57 THR ASP PRO THR GLU GLU GLY PRO ARG ARG GLY ILE VAL SEQRES 4 A 57 GLU GLN CYS CYS HIS SER ILE CYS SER LEU GLU GLN LEU SEQRES 5 A 57 GLU ASN TYR CYS ASN HELIX 1 AA1 CYS A 7 GLY A 20 1 14 HELIX 2 AA2 GLU A 21 GLY A 23 5 3 HELIX 3 AA3 GLY A 37 CYS A 43 1 7 HELIX 4 AA4 LEU A 49 ASN A 54 1 6 SSBOND 1 CYS A 7 CYS A 43 1555 1555 2.02 SSBOND 2 CYS A 19 CYS A 56 1555 1555 2.02 SSBOND 3 CYS A 42 CYS A 47 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1