HEADER VIRAL PROTEIN 12-JUL-17 5WFI TITLE X-RAY STRUCTURE OF MHV PLP2 (CYS1716SER) CATALYTIC MUTANT IN COMPLEX TITLE 2 WITH FREE UBIQUITIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PAPAIN-LIKE PROTEASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1609-1911; COMPND 5 SYNONYM: PP1AB,ORF1AB POLYPROTEIN; COMPND 6 EC: 3.4.22.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: UBIQUITIN; COMPND 11 CHAIN: C, D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MURINE CORONAVIRUS (STRAIN A59); SOURCE 3 ORGANISM_COMMON: MHV-A59; SOURCE 4 ORGANISM_TAXID: 11142; SOURCE 5 STRAIN: A59; SOURCE 6 GENE: REP, 1A-1B; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: UBB; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS UBIQUITIN SPECIFIC PROTEASE, USP, PAPAIN-LIKE PROTEASE, MHV, MOUSE KEYWDS 2 HEPATITIS VIRUS, CORONAVIRUS, PLP, PLP2, DUB, DEUBIQUITINASE, VIRAL KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.D.MESECAR,Y.CHEN REVDAT 4 04-OCT-23 5WFI 1 REMARK REVDAT 3 11-DEC-19 5WFI 1 REMARK REVDAT 2 25-SEP-19 5WFI 1 REMARK REVDAT 1 01-AUG-18 5WFI 0 JRNL AUTH A.D.MESECAR,Y.CHEN JRNL TITL X-RAY STRUCTURE OF MHV PLP2 (CYS1716SER) CATALYTIC MUTANT IN JRNL TITL 2 COMPLEX WITH FREE UBIQUITIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 73602 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.720 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.5841 - 4.4588 0.99 5289 147 0.1413 0.1558 REMARK 3 2 4.4588 - 3.5399 1.00 5198 145 0.1243 0.1459 REMARK 3 3 3.5399 - 3.0927 1.00 5139 144 0.1538 0.2157 REMARK 3 4 3.0927 - 2.8100 1.00 5136 143 0.1702 0.2095 REMARK 3 5 2.8100 - 2.6087 1.00 5133 143 0.1769 0.2311 REMARK 3 6 2.6087 - 2.4549 1.00 5101 143 0.1699 0.2180 REMARK 3 7 2.4549 - 2.3320 1.00 5101 142 0.1692 0.2438 REMARK 3 8 2.3320 - 2.2305 1.00 5098 143 0.1623 0.2272 REMARK 3 9 2.2305 - 2.1446 1.00 5083 142 0.1674 0.2088 REMARK 3 10 2.1446 - 2.0706 1.00 5062 141 0.1720 0.2210 REMARK 3 11 2.0706 - 2.0059 1.00 5084 142 0.1825 0.2439 REMARK 3 12 2.0059 - 1.9486 1.00 5090 143 0.1888 0.2410 REMARK 3 13 1.9486 - 1.8973 1.00 5034 140 0.2057 0.2786 REMARK 3 14 1.8973 - 1.8510 0.99 5055 141 0.2252 0.2827 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 6182 REMARK 3 ANGLE : 0.738 8350 REMARK 3 CHIRALITY : 0.051 927 REMARK 3 PLANARITY : 0.005 1065 REMARK 3 DIHEDRAL : 10.493 3733 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 26 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1609 THROUGH 1668 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7320 31.4824 9.1752 REMARK 3 T TENSOR REMARK 3 T11: 0.3271 T22: 0.3144 REMARK 3 T33: 0.2616 T12: -0.0280 REMARK 3 T13: 0.0170 T23: 0.0430 REMARK 3 L TENSOR REMARK 3 L11: 2.5310 L22: 2.0370 REMARK 3 L33: 2.3664 L12: 1.4748 REMARK 3 L13: -1.1637 L23: -1.6234 REMARK 3 S TENSOR REMARK 3 S11: -0.2654 S12: 0.3227 S13: 0.1423 REMARK 3 S21: -0.5508 S22: 0.2636 S23: -0.1587 REMARK 3 S31: 0.3309 S32: 0.0646 S33: 0.0099 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1669 THROUGH 1780 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9782 23.9361 30.9192 REMARK 3 T TENSOR REMARK 3 T11: 0.2034 T22: 0.2126 REMARK 3 T33: 0.1495 T12: 0.0198 REMARK 3 T13: 0.0079 T23: -0.0314 REMARK 3 L TENSOR REMARK 3 L11: 1.9453 L22: 1.4174 REMARK 3 L33: 3.4093 L12: -0.0798 REMARK 3 L13: 1.2208 L23: -0.8617 REMARK 3 S TENSOR REMARK 3 S11: -0.0051 S12: 0.1721 S13: 0.0253 REMARK 3 S21: -0.1155 S22: -0.0394 S23: -0.0720 REMARK 3 S31: -0.0899 S32: 0.2513 S33: 0.0353 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1781 THROUGH 1909 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1912 14.6172 51.2815 REMARK 3 T TENSOR REMARK 3 T11: 0.3255 T22: 0.2180 REMARK 3 T33: 0.2228 T12: 0.0132 REMARK 3 T13: -0.0724 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.6878 L22: 1.7400 REMARK 3 L33: 3.3389 L12: 0.3261 REMARK 3 L13: -0.3419 L23: -0.0542 REMARK 3 S TENSOR REMARK 3 S11: -0.0074 S12: -0.0995 S13: -0.0677 REMARK 3 S21: 0.2556 S22: -0.0229 S23: -0.1300 REMARK 3 S31: 0.4918 S32: 0.1649 S33: 0.0296 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1609 THROUGH 1695 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0167 11.3686 -7.1721 REMARK 3 T TENSOR REMARK 3 T11: 0.2015 T22: 0.2115 REMARK 3 T33: 0.2675 T12: -0.0307 REMARK 3 T13: 0.0051 T23: -0.0643 REMARK 3 L TENSOR REMARK 3 L11: 1.5965 L22: 3.6413 REMARK 3 L33: 2.7648 L12: -0.0644 REMARK 3 L13: -0.0332 L23: 0.2600 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: 0.1053 S13: -0.2647 REMARK 3 S21: -0.3213 S22: -0.1295 S23: 0.3409 REMARK 3 S31: 0.1445 S32: -0.1746 S33: 0.1126 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1696 THROUGH 1780 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5537 15.4151 14.8839 REMARK 3 T TENSOR REMARK 3 T11: 0.1501 T22: 0.2136 REMARK 3 T33: 0.2280 T12: 0.0222 REMARK 3 T13: 0.0076 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 1.8022 L22: 2.0926 REMARK 3 L33: 2.5203 L12: 0.6242 REMARK 3 L13: 0.2058 L23: -0.3297 REMARK 3 S TENSOR REMARK 3 S11: -0.0687 S12: -0.0994 S13: -0.0272 REMARK 3 S21: 0.0049 S22: 0.1119 S23: 0.2062 REMARK 3 S31: 0.0157 S32: -0.3578 S33: -0.0333 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1781 THROUGH 1878 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.3135 25.2323 26.3747 REMARK 3 T TENSOR REMARK 3 T11: 0.2177 T22: 0.1905 REMARK 3 T33: 0.1887 T12: 0.0461 REMARK 3 T13: 0.0130 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 2.0453 L22: 1.1515 REMARK 3 L33: 0.9726 L12: 1.0280 REMARK 3 L13: 0.4716 L23: 0.3398 REMARK 3 S TENSOR REMARK 3 S11: -0.0171 S12: -0.2294 S13: 0.1087 REMARK 3 S21: 0.0199 S22: -0.0254 S23: 0.0267 REMARK 3 S31: -0.1389 S32: 0.0371 S33: 0.0372 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1879 THROUGH 1911 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7663 17.8109 32.9857 REMARK 3 T TENSOR REMARK 3 T11: 0.2701 T22: 0.4309 REMARK 3 T33: 0.2563 T12: 0.0531 REMARK 3 T13: 0.0628 T23: 0.0216 REMARK 3 L TENSOR REMARK 3 L11: 2.4526 L22: 0.9081 REMARK 3 L33: 2.1644 L12: 0.6793 REMARK 3 L13: 0.0278 L23: 0.0147 REMARK 3 S TENSOR REMARK 3 S11: 0.0290 S12: -0.6824 S13: 0.0332 REMARK 3 S21: 0.3471 S22: 0.0026 S23: 0.2733 REMARK 3 S31: -0.0854 S32: -0.3327 S33: -0.0157 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3190 33.5106 63.6911 REMARK 3 T TENSOR REMARK 3 T11: 0.3243 T22: 0.4300 REMARK 3 T33: 0.2728 T12: 0.0733 REMARK 3 T13: -0.0464 T23: -0.1471 REMARK 3 L TENSOR REMARK 3 L11: 5.9809 L22: 2.6607 REMARK 3 L33: 1.3360 L12: -0.6377 REMARK 3 L13: -1.8071 L23: -0.3859 REMARK 3 S TENSOR REMARK 3 S11: -0.3661 S12: -0.3952 S13: 0.1786 REMARK 3 S21: 0.2474 S22: 0.0581 S23: -0.1643 REMARK 3 S31: -0.4364 S32: -0.3057 S33: 0.2644 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 12 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.6541 37.8162 64.4114 REMARK 3 T TENSOR REMARK 3 T11: 0.4050 T22: 0.3576 REMARK 3 T33: 0.3310 T12: 0.1042 REMARK 3 T13: -0.0568 T23: -0.1407 REMARK 3 L TENSOR REMARK 3 L11: 5.0819 L22: 6.9288 REMARK 3 L33: 7.5766 L12: -1.6346 REMARK 3 L13: 4.7620 L23: -2.9992 REMARK 3 S TENSOR REMARK 3 S11: -0.1853 S12: -0.2310 S13: 0.2479 REMARK 3 S21: 0.0459 S22: -0.0137 S23: 0.5451 REMARK 3 S31: -0.7229 S32: -0.1996 S33: 0.1758 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 17 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.9053 37.3777 56.9207 REMARK 3 T TENSOR REMARK 3 T11: 0.1273 T22: 0.6917 REMARK 3 T33: 0.6463 T12: 0.5393 REMARK 3 T13: -0.4239 T23: -0.3365 REMARK 3 L TENSOR REMARK 3 L11: 2.1428 L22: 0.4752 REMARK 3 L33: 1.1002 L12: -0.1015 REMARK 3 L13: 1.2337 L23: -0.4122 REMARK 3 S TENSOR REMARK 3 S11: 0.0803 S12: -0.1886 S13: 0.1039 REMARK 3 S21: -0.1405 S22: -0.0919 S23: 0.2549 REMARK 3 S31: -0.1106 S32: -0.2484 S33: 0.1140 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 23 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.9955 40.3126 54.8865 REMARK 3 T TENSOR REMARK 3 T11: 0.5917 T22: 0.3643 REMARK 3 T33: 0.4338 T12: 0.1305 REMARK 3 T13: -0.1561 T23: -0.1599 REMARK 3 L TENSOR REMARK 3 L11: 4.7291 L22: 5.1644 REMARK 3 L33: 2.1151 L12: 1.2884 REMARK 3 L13: -1.1500 L23: 0.4436 REMARK 3 S TENSOR REMARK 3 S11: -0.0129 S12: -0.2977 S13: 0.9339 REMARK 3 S21: -0.3519 S22: -0.0891 S23: 0.1255 REMARK 3 S31: -0.6880 S32: -0.1183 S33: -0.0104 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 35 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6538 35.2211 51.0046 REMARK 3 T TENSOR REMARK 3 T11: 0.4983 T22: 0.2918 REMARK 3 T33: 0.3291 T12: -0.0380 REMARK 3 T13: -0.0496 T23: -0.0710 REMARK 3 L TENSOR REMARK 3 L11: 1.8139 L22: 4.5256 REMARK 3 L33: 1.7348 L12: 0.2964 REMARK 3 L13: 0.4617 L23: 1.5862 REMARK 3 S TENSOR REMARK 3 S11: -0.3962 S12: -0.0423 S13: 0.4545 REMARK 3 S21: -0.4393 S22: 0.2669 S23: -0.4276 REMARK 3 S31: -0.7846 S32: 0.2494 S33: 0.1576 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 45 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7951 27.9116 51.8286 REMARK 3 T TENSOR REMARK 3 T11: 0.3607 T22: 0.4056 REMARK 3 T33: 0.3050 T12: 0.0364 REMARK 3 T13: -0.1373 T23: -0.1003 REMARK 3 L TENSOR REMARK 3 L11: 4.8004 L22: 4.7900 REMARK 3 L33: 2.6149 L12: -2.3909 REMARK 3 L13: -0.9036 L23: -1.2996 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: 0.0952 S13: 0.1433 REMARK 3 S21: -0.6060 S22: -0.4760 S23: 0.7252 REMARK 3 S31: -0.5212 S32: -0.5266 S33: 0.3819 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 57 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.8174 28.6487 60.2195 REMARK 3 T TENSOR REMARK 3 T11: 0.2739 T22: 0.7746 REMARK 3 T33: 0.3964 T12: -0.0084 REMARK 3 T13: -0.0730 T23: -0.2409 REMARK 3 L TENSOR REMARK 3 L11: 0.9048 L22: 3.6145 REMARK 3 L33: 4.1429 L12: 0.3440 REMARK 3 L13: 0.2494 L23: 1.1824 REMARK 3 S TENSOR REMARK 3 S11: -0.1788 S12: -0.2014 S13: -0.2016 REMARK 3 S21: 0.0524 S22: -0.4030 S23: 0.9540 REMARK 3 S31: -0.0102 S32: -0.8388 S33: 0.4049 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 66 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3806 30.3028 51.7721 REMARK 3 T TENSOR REMARK 3 T11: 0.3234 T22: 0.3338 REMARK 3 T33: 0.2503 T12: -0.0527 REMARK 3 T13: -0.0435 T23: -0.0654 REMARK 3 L TENSOR REMARK 3 L11: 2.8405 L22: 0.9067 REMARK 3 L33: 5.2360 L12: -1.0318 REMARK 3 L13: -2.8384 L23: 0.9748 REMARK 3 S TENSOR REMARK 3 S11: -0.0327 S12: -0.0684 S13: 0.2560 REMARK 3 S21: -0.0996 S22: 0.0209 S23: -0.0669 REMARK 3 S31: -0.5142 S32: 0.2802 S33: 0.0481 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.9682 15.3152 21.5412 REMARK 3 T TENSOR REMARK 3 T11: 0.2153 T22: 0.2414 REMARK 3 T33: 0.2329 T12: 0.0487 REMARK 3 T13: 0.0282 T23: 0.0957 REMARK 3 L TENSOR REMARK 3 L11: 2.4653 L22: 2.7970 REMARK 3 L33: 4.7876 L12: 1.6958 REMARK 3 L13: -2.3527 L23: -2.6463 REMARK 3 S TENSOR REMARK 3 S11: 0.0276 S12: -0.1999 S13: -0.1268 REMARK 3 S21: -0.0379 S22: -0.1592 S23: -0.1963 REMARK 3 S31: 0.2491 S32: 0.3187 S33: 0.0834 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 12 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 66.4257 14.4370 17.1793 REMARK 3 T TENSOR REMARK 3 T11: 0.2041 T22: 0.2486 REMARK 3 T33: 0.2541 T12: 0.0651 REMARK 3 T13: 0.0406 T23: 0.0717 REMARK 3 L TENSOR REMARK 3 L11: 3.0997 L22: 4.4896 REMARK 3 L33: 1.9798 L12: -1.4857 REMARK 3 L13: 0.4956 L23: 0.4451 REMARK 3 S TENSOR REMARK 3 S11: 0.1767 S12: 0.1707 S13: -0.2258 REMARK 3 S21: 0.2157 S22: -0.1757 S23: -0.5310 REMARK 3 S31: 0.1263 S32: 0.4160 S33: -0.1320 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 17 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.9788 20.5229 6.4842 REMARK 3 T TENSOR REMARK 3 T11: 0.2760 T22: 0.2847 REMARK 3 T33: 0.2713 T12: 0.0680 REMARK 3 T13: 0.0718 T23: 0.0833 REMARK 3 L TENSOR REMARK 3 L11: 3.6230 L22: 0.6947 REMARK 3 L33: 1.0272 L12: -0.3009 REMARK 3 L13: 1.1247 L23: -0.5560 REMARK 3 S TENSOR REMARK 3 S11: 0.4524 S12: 0.7553 S13: 0.1264 REMARK 3 S21: -0.5535 S22: -0.2848 S23: -0.4307 REMARK 3 S31: 0.1208 S32: 0.2046 S33: -0.1019 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 23 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.5022 10.6164 11.3820 REMARK 3 T TENSOR REMARK 3 T11: 0.2321 T22: 0.1624 REMARK 3 T33: 0.2164 T12: 0.0639 REMARK 3 T13: 0.0342 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 3.5421 L22: 7.0941 REMARK 3 L33: 2.4138 L12: -1.2237 REMARK 3 L13: -1.3025 L23: -1.1768 REMARK 3 S TENSOR REMARK 3 S11: 0.1397 S12: 0.2799 S13: -0.4529 REMARK 3 S21: -0.2187 S22: -0.1148 S23: 0.0507 REMARK 3 S31: 0.1531 S32: 0.0636 S33: -0.0186 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 35 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.3498 10.0753 15.5508 REMARK 3 T TENSOR REMARK 3 T11: 0.2162 T22: 0.1690 REMARK 3 T33: 0.2667 T12: 0.0516 REMARK 3 T13: 0.0265 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 2.6310 L22: 2.8698 REMARK 3 L33: 2.2102 L12: -1.1376 REMARK 3 L13: -0.8260 L23: 0.2615 REMARK 3 S TENSOR REMARK 3 S11: 0.0016 S12: 0.0096 S13: -0.5908 REMARK 3 S21: -0.0429 S22: -0.1210 S23: 0.6119 REMARK 3 S31: 0.2778 S32: 0.0523 S33: 0.1592 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 45 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.0763 23.8675 18.7866 REMARK 3 T TENSOR REMARK 3 T11: 0.2042 T22: 0.1677 REMARK 3 T33: 0.2024 T12: 0.0122 REMARK 3 T13: 0.0147 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 5.1091 L22: 2.8034 REMARK 3 L33: 6.5626 L12: -2.3098 REMARK 3 L13: 1.7717 L23: 1.0488 REMARK 3 S TENSOR REMARK 3 S11: 0.0980 S12: -0.0477 S13: -0.2010 REMARK 3 S21: -0.1138 S22: 0.0039 S23: 0.0939 REMARK 3 S31: -0.2997 S32: 0.0203 S33: -0.1232 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 50 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.0877 20.5190 9.0933 REMARK 3 T TENSOR REMARK 3 T11: 0.2040 T22: 0.2048 REMARK 3 T33: 0.2269 T12: 0.0210 REMARK 3 T13: -0.0375 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 7.9237 L22: 5.4868 REMARK 3 L33: 2.3304 L12: 0.6436 REMARK 3 L13: -1.9755 L23: 2.6936 REMARK 3 S TENSOR REMARK 3 S11: -0.1050 S12: 0.7419 S13: 0.2918 REMARK 3 S21: -0.1227 S22: -0.3325 S23: 0.1578 REMARK 3 S31: -0.0581 S32: -0.3463 S33: 0.4535 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 55 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.7138 25.4137 9.0037 REMARK 3 T TENSOR REMARK 3 T11: 0.2649 T22: 0.1884 REMARK 3 T33: 0.3159 T12: 0.0618 REMARK 3 T13: 0.0296 T23: 0.0785 REMARK 3 L TENSOR REMARK 3 L11: 3.2579 L22: 2.0537 REMARK 3 L33: 1.6098 L12: -0.9001 REMARK 3 L13: -0.3519 L23: 0.2619 REMARK 3 S TENSOR REMARK 3 S11: 0.0730 S12: 0.2771 S13: 0.9384 REMARK 3 S21: -0.4376 S22: 0.0112 S23: -0.4829 REMARK 3 S31: -0.2256 S32: 0.2343 S33: -0.0143 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 60 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.4166 26.4720 15.5764 REMARK 3 T TENSOR REMARK 3 T11: 0.2058 T22: 0.2046 REMARK 3 T33: 0.2805 T12: 0.0083 REMARK 3 T13: 0.0251 T23: 0.0309 REMARK 3 L TENSOR REMARK 3 L11: 6.3453 L22: 2.0259 REMARK 3 L33: 8.2012 L12: 0.3782 REMARK 3 L13: -1.5837 L23: -1.3406 REMARK 3 S TENSOR REMARK 3 S11: 0.2678 S12: -0.0460 S13: 0.2984 REMARK 3 S21: -0.1498 S22: -0.1149 S23: 0.3116 REMARK 3 S31: -0.2314 S32: 0.5929 S33: -0.0372 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 66 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.7559 15.7728 21.2193 REMARK 3 T TENSOR REMARK 3 T11: 0.1841 T22: 0.1749 REMARK 3 T33: 0.1818 T12: 0.0051 REMARK 3 T13: 0.0123 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 4.3581 L22: 2.1759 REMARK 3 L33: 2.8728 L12: 0.9125 REMARK 3 L13: -0.2583 L23: 0.0267 REMARK 3 S TENSOR REMARK 3 S11: 0.2426 S12: -0.0371 S13: -0.1295 REMARK 3 S21: 0.1026 S22: -0.2769 S23: 0.0723 REMARK 3 S31: -0.0549 S32: 0.2211 S33: 0.0134 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 72 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.3415 6.8889 19.6272 REMARK 3 T TENSOR REMARK 3 T11: 0.2482 T22: 0.2032 REMARK 3 T33: 0.3189 T12: 0.0201 REMARK 3 T13: 0.0048 T23: 0.0468 REMARK 3 L TENSOR REMARK 3 L11: 4.8929 L22: 7.0962 REMARK 3 L33: 4.0131 L12: 5.3844 REMARK 3 L13: -4.0092 L23: -3.5225 REMARK 3 S TENSOR REMARK 3 S11: -0.0912 S12: 0.6287 S13: -0.2844 REMARK 3 S21: -0.5235 S22: 0.1387 S23: 0.3443 REMARK 3 S31: 0.5071 S32: -0.2355 S33: -0.0608 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WFI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1000228952. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73615 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 4YPT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM TRIS, PH 7.5, 100 MM SODIUM REMARK 280 CHLORIDE, 5 MM DTT, 0.2 M POTASSIUM FORMATE, 20% PEG3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 99.75750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.69400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 99.75750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.69400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 1910 REMARK 465 LYS A 1911 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 203 O HOH D 281 1.90 REMARK 500 O HOH A 2250 O HOH A 2302 1.95 REMARK 500 O HOH B 2299 O HOH B 2332 1.97 REMARK 500 O HOH A 2260 O HOH A 2284 1.99 REMARK 500 O HOH B 2276 O HOH B 2303 1.99 REMARK 500 O HOH B 2285 O HOH B 2323 2.02 REMARK 500 O HOH B 2129 O HOH B 2294 2.03 REMARK 500 O HOH B 2243 O HOH B 2354 2.04 REMARK 500 O HOH B 2145 O HOH B 2210 2.06 REMARK 500 O HOH A 2225 O HOH A 2308 2.07 REMARK 500 O HOH D 269 O HOH D 284 2.08 REMARK 500 O HOH A 2136 O HOH A 2276 2.11 REMARK 500 O HOH D 224 O HOH D 272 2.13 REMARK 500 O HOH D 235 O HOH D 296 2.13 REMARK 500 O HOH D 230 O HOH D 251 2.13 REMARK 500 O HOH D 275 O HOH D 289 2.14 REMARK 500 OE1 GLU B 1780 O HOH B 2101 2.16 REMARK 500 O HOH B 2218 O HOH B 2273 2.17 REMARK 500 N GLY D 53 O HOH D 201 2.17 REMARK 500 O HOH D 242 O HOH D 292 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2125 O HOH B 2349 2565 1.91 REMARK 500 O HOH B 2296 O HOH C 236 4546 1.94 REMARK 500 NH2 ARG A 1623 O1 FMT B 2004 2565 2.14 REMARK 500 O HOH A 2279 O HOH C 225 1545 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A1664 18.96 -148.33 REMARK 500 SER A1712 138.85 -170.87 REMARK 500 LYS A1880 91.92 -162.13 REMARK 500 ALA A1888 -126.33 56.31 REMARK 500 TYR B1664 27.88 -148.56 REMARK 500 GLN B1839 118.58 -163.65 REMARK 500 ASN B1841 59.22 -146.60 REMARK 500 ALA B1888 -121.51 51.17 REMARK 500 THR B1902 -31.38 -130.23 REMARK 500 ASN B1909 30.81 73.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2322 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A2323 DISTANCE = 6.06 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A2005 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1794 SG REMARK 620 2 CYS A1796 SG 100.6 REMARK 620 3 CYS A1828 SG 120.1 103.8 REMARK 620 4 CYS A1830 SG 108.2 113.9 110.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B2005 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1794 SG REMARK 620 2 CYS B1796 SG 105.8 REMARK 620 3 CYS B1828 SG 114.5 106.1 REMARK 620 4 CYS B1830 SG 108.7 110.8 110.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 102 DBREF 5WFI A 1609 1911 UNP P0C6X9 R1AB_CVMA5 1609 1911 DBREF 5WFI B 1609 1911 UNP P0C6X9 R1AB_CVMA5 1609 1911 DBREF 5WFI C 1 76 UNP P0CG47 UBB_HUMAN 1 76 DBREF 5WFI D 1 76 UNP P0CG47 UBB_HUMAN 1 76 SEQADV 5WFI SER A 1716 UNP P0C6X9 CYS 1716 ENGINEERED MUTATION SEQADV 5WFI SER B 1716 UNP P0C6X9 CYS 1716 ENGINEERED MUTATION SEQRES 1 A 303 ASN LYS VAL ASP VAL LEU CYS THR VAL ASP GLY VAL ASN SEQRES 2 A 303 PHE ARG SER CYS CYS VAL ALA GLU GLY GLU VAL PHE GLY SEQRES 3 A 303 LYS THR LEU GLY SER VAL PHE CYS ASP GLY ILE ASN VAL SEQRES 4 A 303 THR LYS VAL ARG CYS SER ALA ILE TYR LYS GLY LYS VAL SEQRES 5 A 303 PHE PHE GLN TYR SER ASP LEU SER GLU ALA ASP LEU VAL SEQRES 6 A 303 ALA VAL LYS ASP ALA PHE GLY PHE ASP GLU PRO GLN LEU SEQRES 7 A 303 LEU LYS TYR TYR THR MET LEU GLY MET CYS LYS TRP PRO SEQRES 8 A 303 VAL VAL VAL CYS GLY ASN TYR PHE ALA PHE LYS GLN SER SEQRES 9 A 303 ASN ASN ASN SER TYR ILE ASN VAL ALA CYS LEU MET LEU SEQRES 10 A 303 GLN HIS LEU SER LEU LYS PHE PRO LYS TRP GLN TRP GLN SEQRES 11 A 303 GLU ALA TRP ASN GLU PHE ARG SER GLY LYS PRO LEU ARG SEQRES 12 A 303 PHE VAL SER LEU VAL LEU ALA LYS GLY SER PHE LYS PHE SEQRES 13 A 303 ASN GLU PRO SER ASP SER ILE ASP PHE MET ARG VAL VAL SEQRES 14 A 303 LEU ARG GLU ALA ASP LEU SER GLY ALA THR CYS ASN LEU SEQRES 15 A 303 GLU PHE VAL CYS LYS CYS GLY VAL LYS GLN GLU GLN ARG SEQRES 16 A 303 LYS GLY VAL ASP ALA VAL MET HIS PHE GLY THR LEU ASP SEQRES 17 A 303 LYS GLY ASP LEU VAL ARG GLY TYR ASN ILE ALA CYS THR SEQRES 18 A 303 CYS GLY SER LYS LEU VAL HIS CYS THR GLN PHE ASN VAL SEQRES 19 A 303 PRO PHE LEU ILE CYS SER ASN THR PRO GLU GLY ARG LYS SEQRES 20 A 303 LEU PRO ASP ASP VAL VAL ALA ALA ASN ILE PHE THR GLY SEQRES 21 A 303 GLY SER VAL GLY HIS TYR THR HIS VAL LYS CYS LYS PRO SEQRES 22 A 303 LYS TYR GLN LEU TYR ASP ALA CYS ASN VAL ASN LYS VAL SEQRES 23 A 303 SER GLU ALA LYS GLY ASN PHE THR ASP CYS LEU TYR LEU SEQRES 24 A 303 LYS ASN LEU LYS SEQRES 1 B 303 ASN LYS VAL ASP VAL LEU CYS THR VAL ASP GLY VAL ASN SEQRES 2 B 303 PHE ARG SER CYS CYS VAL ALA GLU GLY GLU VAL PHE GLY SEQRES 3 B 303 LYS THR LEU GLY SER VAL PHE CYS ASP GLY ILE ASN VAL SEQRES 4 B 303 THR LYS VAL ARG CYS SER ALA ILE TYR LYS GLY LYS VAL SEQRES 5 B 303 PHE PHE GLN TYR SER ASP LEU SER GLU ALA ASP LEU VAL SEQRES 6 B 303 ALA VAL LYS ASP ALA PHE GLY PHE ASP GLU PRO GLN LEU SEQRES 7 B 303 LEU LYS TYR TYR THR MET LEU GLY MET CYS LYS TRP PRO SEQRES 8 B 303 VAL VAL VAL CYS GLY ASN TYR PHE ALA PHE LYS GLN SER SEQRES 9 B 303 ASN ASN ASN SER TYR ILE ASN VAL ALA CYS LEU MET LEU SEQRES 10 B 303 GLN HIS LEU SER LEU LYS PHE PRO LYS TRP GLN TRP GLN SEQRES 11 B 303 GLU ALA TRP ASN GLU PHE ARG SER GLY LYS PRO LEU ARG SEQRES 12 B 303 PHE VAL SER LEU VAL LEU ALA LYS GLY SER PHE LYS PHE SEQRES 13 B 303 ASN GLU PRO SER ASP SER ILE ASP PHE MET ARG VAL VAL SEQRES 14 B 303 LEU ARG GLU ALA ASP LEU SER GLY ALA THR CYS ASN LEU SEQRES 15 B 303 GLU PHE VAL CYS LYS CYS GLY VAL LYS GLN GLU GLN ARG SEQRES 16 B 303 LYS GLY VAL ASP ALA VAL MET HIS PHE GLY THR LEU ASP SEQRES 17 B 303 LYS GLY ASP LEU VAL ARG GLY TYR ASN ILE ALA CYS THR SEQRES 18 B 303 CYS GLY SER LYS LEU VAL HIS CYS THR GLN PHE ASN VAL SEQRES 19 B 303 PRO PHE LEU ILE CYS SER ASN THR PRO GLU GLY ARG LYS SEQRES 20 B 303 LEU PRO ASP ASP VAL VAL ALA ALA ASN ILE PHE THR GLY SEQRES 21 B 303 GLY SER VAL GLY HIS TYR THR HIS VAL LYS CYS LYS PRO SEQRES 22 B 303 LYS TYR GLN LEU TYR ASP ALA CYS ASN VAL ASN LYS VAL SEQRES 23 B 303 SER GLU ALA LYS GLY ASN PHE THR ASP CYS LEU TYR LEU SEQRES 24 B 303 LYS ASN LEU LYS SEQRES 1 C 76 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 C 76 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 C 76 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 C 76 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 C 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 C 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY SEQRES 1 D 76 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 D 76 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 D 76 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 D 76 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 D 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 D 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY HET GOL A2001 6 HET GOL A2002 6 HET GOL A2003 14 HET FMT A2004 5 HET ZN A2005 1 HET GOL B2001 6 HET GOL B2002 6 HET GOL B2003 6 HET FMT B2004 5 HET ZN B2005 1 HET GOL C 101 6 HET GOL C 102 14 HET GOL D 101 6 HET GOL D 102 6 HETNAM GOL GLYCEROL HETNAM FMT FORMIC ACID HETNAM ZN ZINC ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL 10(C3 H8 O3) FORMUL 8 FMT 2(C H2 O2) FORMUL 9 ZN 2(ZN 2+) FORMUL 19 HOH *638(H2 O) HELIX 1 AA1 VAL A 1632 GLY A 1638 1 7 HELIX 2 AA2 SER A 1653 LYS A 1657 5 5 HELIX 3 AA3 SER A 1668 GLY A 1680 1 13 HELIX 4 AA4 ASP A 1682 CYS A 1696 1 15 HELIX 5 AA5 ASN A 1715 GLN A 1726 1 12 HELIX 6 AA6 LYS A 1734 SER A 1746 1 13 HELIX 7 AA7 PRO A 1749 GLY A 1760 1 12 HELIX 8 AA8 ASP A 1769 ALA A 1781 1 13 HELIX 9 AA9 GLY A 1805 VAL A 1809 1 5 HELIX 10 AB1 ASP A 1816 GLY A 1823 1 8 HELIX 11 AB2 PHE B 1633 GLY B 1638 1 6 HELIX 12 AB3 SER B 1653 LYS B 1657 5 5 HELIX 13 AB4 SER B 1668 GLY B 1680 1 13 HELIX 14 AB5 ASP B 1682 CYS B 1696 1 15 HELIX 15 AB6 ASN B 1715 GLN B 1726 1 12 HELIX 16 AB7 LYS B 1734 SER B 1746 1 13 HELIX 17 AB8 PRO B 1749 GLY B 1760 1 12 HELIX 18 AB9 ASP B 1769 ALA B 1781 1 13 HELIX 19 AC1 GLY B 1805 VAL B 1809 1 5 HELIX 20 AC2 ASP B 1816 GLY B 1823 1 8 HELIX 21 AC3 THR C 22 GLY C 35 1 14 HELIX 22 AC4 PRO C 37 ASP C 39 5 3 HELIX 23 AC5 LEU C 56 ASN C 60 5 5 HELIX 24 AC6 THR D 22 GLY D 35 1 14 HELIX 25 AC7 PRO D 37 ASP D 39 5 3 SHEET 1 AA1 5 ARG A1623 ALA A1628 0 SHEET 2 AA1 5 LYS A1610 THR A1616 -1 N VAL A1613 O CYS A1625 SHEET 3 AA1 5 VAL A1660 GLN A1663 1 O PHE A1661 N LEU A1614 SHEET 4 AA1 5 VAL A1640 CYS A1642 -1 N PHE A1641 O PHE A1662 SHEET 5 AA1 5 ILE A1645 ASN A1646 -1 O ILE A1645 N CYS A1642 SHEET 1 AA2 2 VAL A1700 CYS A1703 0 SHEET 2 AA2 2 TYR A1706 PHE A1709 -1 O TYR A1706 N CYS A1703 SHEET 1 AA3 4 GLY A1797 LYS A1804 0 SHEET 2 AA3 4 THR A1787 CYS A1794 -1 N LEU A1790 O GLU A1801 SHEET 3 AA3 4 GLY A1831 ASN A1841 -1 O LEU A1834 N VAL A1793 SHEET 4 AA3 4 TYR A1824 CYS A1828 -1 N TYR A1824 O VAL A1835 SHEET 1 AA4 7 MET A1810 PHE A1812 0 SHEET 2 AA4 7 PHE A1844 GLU A1852 1 O SER A1848 N HIS A1811 SHEET 3 AA4 7 PHE A1901 LEU A1907 -1 O TYR A1906 N LEU A1845 SHEET 4 AA4 7 ALA A1862 GLY A1868 -1 N ASN A1864 O THR A1902 SHEET 5 AA4 7 GLY A1872 LYS A1878 -1 O THR A1875 N ILE A1865 SHEET 6 AA4 7 GLN A1884 ASP A1887 -1 O TYR A1886 N HIS A1876 SHEET 7 AA4 7 ASN A1890 LYS A1893 -1 O ASN A1892 N LEU A1885 SHEET 1 AA5 5 PHE B1622 ALA B1628 0 SHEET 2 AA5 5 LYS B1610 THR B1616 -1 N VAL B1613 O CYS B1625 SHEET 3 AA5 5 VAL B1660 GLN B1663 1 O PHE B1661 N LEU B1614 SHEET 4 AA5 5 VAL B1640 CYS B1642 -1 N PHE B1641 O PHE B1662 SHEET 5 AA5 5 ILE B1645 ASN B1646 -1 O ILE B1645 N CYS B1642 SHEET 1 AA6 2 VAL B1700 CYS B1703 0 SHEET 2 AA6 2 TYR B1706 PHE B1709 -1 O TYR B1706 N CYS B1703 SHEET 1 AA7 4 GLY B1797 LYS B1804 0 SHEET 2 AA7 4 THR B1787 CYS B1794 -1 N LEU B1790 O GLU B1801 SHEET 3 AA7 4 GLY B1831 ASN B1841 -1 O LEU B1834 N VAL B1793 SHEET 4 AA7 4 TYR B1824 CYS B1828 -1 N TYR B1824 O VAL B1835 SHEET 1 AA8 7 MET B1810 PHE B1812 0 SHEET 2 AA8 7 LEU B1845 GLU B1852 1 O SER B1848 N HIS B1811 SHEET 3 AA8 7 PHE B1901 TYR B1906 -1 O TYR B1906 N LEU B1845 SHEET 4 AA8 7 ALA B1862 GLY B1868 -1 N ALA B1862 O LEU B1905 SHEET 5 AA8 7 GLY B1872 LYS B1878 -1 O THR B1875 N ILE B1865 SHEET 6 AA8 7 GLN B1884 ASP B1887 -1 O TYR B1886 N HIS B1876 SHEET 7 AA8 7 ASN B1890 LYS B1893 -1 O ASN B1892 N LEU B1885 SHEET 1 AA9 5 THR C 12 GLU C 16 0 SHEET 2 AA9 5 GLN C 2 LYS C 6 -1 N VAL C 5 O ILE C 13 SHEET 3 AA9 5 THR C 66 LEU C 71 1 O LEU C 67 N PHE C 4 SHEET 4 AA9 5 GLN C 41 PHE C 45 -1 N ARG C 42 O VAL C 70 SHEET 5 AA9 5 LYS C 48 GLN C 49 -1 O LYS C 48 N PHE C 45 SHEET 1 AB1 5 THR D 12 GLU D 16 0 SHEET 2 AB1 5 GLN D 2 LYS D 6 -1 N ILE D 3 O LEU D 15 SHEET 3 AB1 5 THR D 66 LEU D 71 1 O LEU D 67 N LYS D 6 SHEET 4 AB1 5 GLN D 41 PHE D 45 -1 N ILE D 44 O HIS D 68 SHEET 5 AB1 5 LYS D 48 GLN D 49 -1 O LYS D 48 N PHE D 45 SSBOND 1 CYS A 1615 CYS A 1625 1555 1555 2.07 SSBOND 2 CYS B 1615 CYS B 1625 1555 1555 2.06 LINK SG CYS A1794 ZN ZN A2005 1555 1555 2.39 LINK SG CYS A1796 ZN ZN A2005 1555 1555 2.40 LINK SG CYS A1828 ZN ZN A2005 1555 1555 2.35 LINK SG CYS A1830 ZN ZN A2005 1555 1555 2.29 LINK SG CYS B1794 ZN ZN B2005 1555 1555 2.32 LINK SG CYS B1796 ZN ZN B2005 1555 1555 2.35 LINK SG CYS B1828 ZN ZN B2005 1555 1555 2.28 LINK SG CYS B1830 ZN ZN B2005 1555 1555 2.39 CISPEP 1 LYS A 1880 PRO A 1881 0 2.69 CISPEP 2 LYS A 1882 TYR A 1883 0 -4.11 CISPEP 3 LYS B 1880 PRO B 1881 0 1.60 CISPEP 4 LYS B 1882 TYR B 1883 0 -8.74 SITE 1 AC1 5 PHE A1641 ASP A1643 GLY A1644 PHE A1662 SITE 2 AC1 5 TYR A1689 SITE 1 AC2 5 ARG A1623 SER A1665 ASP A1666 ASP A1671 SITE 2 AC2 5 ARG B1651 SITE 1 AC3 8 ARG A1822 HIS A1836 VAL B1793 CYS B1794 SITE 2 AC3 8 ASN B1825 SER B1832 LYS B1833 LEU B1834 SITE 1 AC4 6 ARG A1779 GLU A1780 ALA A1781 HOH A2136 SITE 2 AC4 6 HOH A2165 HOH A2206 SITE 1 AC5 4 CYS A1794 CYS A1796 CYS A1828 CYS A1830 SITE 1 AC6 7 ARG B1623 SER B1665 ASP B1666 LEU B1667 SITE 2 AC6 7 SER B1668 ASP B1671 HOH B2144 SITE 1 AC7 5 PHE B1662 TYR B1689 TYR B1690 GLN B1736 SITE 2 AC7 5 HOH B2134 SITE 1 AC8 4 GLY A1658 HOH A2101 HOH B2122 HOH B2196 SITE 1 AC9 4 ARG A1623 THR A1636 GLN A1663 ARG B1651 SITE 1 AD1 4 CYS B1794 CYS B1796 CYS B1828 CYS B1830 SITE 1 AD2 9 ASP A1772 LYS C 27 ARG C 42 LEU C 43 SITE 2 AD2 9 GLN C 49 LEU C 50 ARG C 72 HOH C 202 SITE 3 AD2 9 HOH C 207 SITE 1 AD3 6 THR C 7 LEU C 8 THR C 9 ILE C 36 SITE 2 AD3 6 LEU C 69 HOH C 227 SITE 1 AD4 7 THR D 7 LEU D 8 ILE D 36 LEU D 69 SITE 2 AD4 7 HOH D 214 HOH D 229 HOH D 244 SITE 1 AD5 10 ASP B1772 LYS D 27 ARG D 42 LEU D 43 SITE 2 AD5 10 GLN D 49 LEU D 50 GLU D 51 ARG D 72 SITE 3 AD5 10 HOH D 213 HOH D 269 CRYST1 199.515 43.388 110.159 90.00 114.85 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005012 0.000000 0.002321 0.00000 SCALE2 0.000000 0.023048 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010004 0.00000