HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 14-JUL-17 5WGS TITLE CRYSTAL STRUCTURE OF MALA' H253F, PREMALBRANCHEAMIDE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVIN-DEPENDENT HALOGENASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MALBRANCHEA AURANTIACA; SOURCE 3 ORGANISM_TAXID: 78605; SOURCE 4 GENE: MALA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS FLAVIN-DEPENDENT HALOGENASE, MALBRANCHEAMIDE, ZINC, ZN, KEYWDS 2 OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.E.FRALEY,J.L.SMITH REVDAT 5 04-OCT-23 5WGS 1 LINK REVDAT 4 27-NOV-19 5WGS 1 REMARK REVDAT 3 20-SEP-17 5WGS 1 REMARK REVDAT 2 06-SEP-17 5WGS 1 JRNL REVDAT 1 16-AUG-17 5WGS 0 JRNL AUTH A.E.FRALEY,M.GARCIA-BORRAS,A.TRIPATHI,D.KHARE, JRNL AUTH 2 E.V.MERCADO-MARIN,H.TRAN,Q.DAN,G.P.WEBB,K.R.WATTS,P.CREWS, JRNL AUTH 3 R.SARPONG,R.M.WILLIAMS,J.L.SMITH,K.N.HOUK,D.H.SHERMAN JRNL TITL FUNCTION AND STRUCTURE OF MALA/MALA', ITERATIVE HALOGENASES JRNL TITL 2 FOR LATE-STAGE C-H FUNCTIONALIZATION OF INDOLE ALKALOIDS. JRNL REF J. AM. CHEM. SOC. V. 139 12060 2017 JRNL REFN ESSN 1520-5126 JRNL PMID 28777910 JRNL DOI 10.1021/JACS.7B06773 REMARK 2 REMARK 2 RESOLUTION. 2.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.340 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 34994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 1702 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 12 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.34 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2718 REMARK 3 BIN R VALUE (WORKING SET) : 0.2893 REMARK 3 BIN FREE R VALUE : 0.4192 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 139 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5249 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 128 REMARK 3 SOLVENT ATOMS : 337 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.21 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WGS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1000228967. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS, AIMLESS 0.5.26 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35017 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.340 REMARK 200 RESOLUTION RANGE LOW (A) : 46.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.15920 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.5900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 1.68100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.11.1_2575, AUTOSOL REMARK 200 STARTING MODEL: 5WGR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, 0.2 M LITHIUM REMARK 280 SULFATE, 0.1 M BIS-TRIS PH 5.5, 5 MM CADMIUM CHLORIDE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.76350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.57450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 85.05900 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.76350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.57450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 85.05900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 39.76350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.57450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 85.05900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 39.76350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 60.57450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 85.05900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -156.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 159.05400 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 170.11800 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CD CD A 702 LIES ON A SPECIAL POSITION. REMARK 375 CD CD A 703 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 667 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 981 O HOH A 1019 2.17 REMARK 500 O HOH A 811 O HOH A 950 2.18 REMARK 500 OD2 ASP A 454 O HOH A 801 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 45 48.83 -98.61 REMARK 500 VAL A 136 -74.16 -110.70 REMARK 500 GLN A 180 69.36 -117.93 REMARK 500 ASN A 227 -168.87 -113.00 REMARK 500 THR A 381 70.70 62.43 REMARK 500 PRO A 392 109.41 -59.00 REMARK 500 THR A 404 -69.93 -125.39 REMARK 500 VAL A 483 -71.72 -121.64 REMARK 500 TRP A 512 -77.79 -85.22 REMARK 500 ASP A 578 -151.99 -90.00 REMARK 500 LEU A 581 45.89 -102.20 REMARK 500 THR A 625 41.43 -78.67 REMARK 500 PRO A 653 2.19 -67.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 702 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 11 OE1 REMARK 620 2 HOH A1063 O 102.1 REMARK 620 3 HOH A1063 O 110.0 105.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 703 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 531 NE2 REMARK 620 2 HIS A 531 NE2 0.0 REMARK 620 3 GLU A 548 OE1 89.3 89.3 REMARK 620 4 GLU A 548 OE2 104.7 104.7 52.1 REMARK 620 5 GLU A 548 OE1 89.3 89.3 0.0 52.1 REMARK 620 6 GLU A 548 OE2 104.7 104.7 52.1 0.0 52.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 705 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 597 SG REMARK 620 2 CYS A 600 SG 110.0 REMARK 620 3 CYS A 613 SG 104.8 106.3 REMARK 620 4 CYS A 616 SG 110.1 111.5 114.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 709 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 710 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PM7 A 711 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PM7 A 712 DBREF 5WGS A 1 667 UNP L0E155 L0E155_9EURO 1 667 SEQADV 5WGS PHE A 253 UNP L0E155 HIS 253 ENGINEERED MUTATION SEQADV 5WGS PRO A 276 UNP L0E155 LEU 276 ENGINEERED MUTATION SEQADV 5WGS PRO A 428 UNP L0E155 ARG 428 ENGINEERED MUTATION SEQRES 1 A 667 MET ALA PRO THR PRO LYS TYR THR PHE THR GLU ARG ALA SEQRES 2 A 667 ALA ALA GLY ASN LEU SER ASP ALA GLU ILE LEU ASN SER SEQRES 3 A 667 ASN ASN PRO THR GLY SER GLU LEU PRO ASP GLU SER ASP SEQRES 4 A 667 VAL VAL VAL GLY GLY ALA GLY ILE HIS GLY LEU ILE TYR SEQRES 5 A 667 ALA LEU HIS ALA SER LYS TYR LYS PRO ASN ASN LEU LYS SEQRES 6 A 667 ILE SER VAL ILE GLU LYS ASN THR ARG PRO GLY TYR LYS SEQRES 7 A 667 ILE GLY GLU SER THR LEU PRO ILE PHE TYR THR TRP CYS SEQRES 8 A 667 LYS LEU HIS GLY ILE SER ALA ALA TYR LEU LEU ARG LEU SEQRES 9 A 667 PHE GLY LEU LYS ASP GLY LEU CYS PHE TYR PHE LEU ASP SEQRES 10 A 667 ARG GLU ASN GLN GLY GLN TYR THR ASP PHE CYS SER VAL SEQRES 11 A 667 GLY ALA PRO GLY LEU VAL LEU ALA SER LEU GLN ILE GLU SEQRES 12 A 667 ARG PRO MET SER GLU LEU LEU PHE THR ILE LEU ALA GLN SEQRES 13 A 667 ARG ASN GLY VAL ASN VAL TYR HIS GLY ARG GLU VAL ASP SEQRES 14 A 667 PHE LYS SER THR VAL VAL GLN GLY GLY GLY GLN GLY ASN SEQRES 15 A 667 LYS ILE ALA VAL SER ARG GLY LYS TYR ASP SER THR PRO SEQRES 16 A 667 LYS THR ILE ASP SER ALA LEU PHE VAL ASP ALA THR GLY SEQRES 17 A 667 ARG PHE ARG GLN PHE CYS SER LYS LYS ALA PRO ARG HIS SEQRES 18 A 667 ARG PHE ASP GLY TRP ASN CYS ASN ALA PHE TRP GLY TYR SEQRES 19 A 667 PHE THR ALA PRO LYS ASP GLU SER LYS ILE PRO PHE ASP SEQRES 20 A 667 LEU TYR GLU GLY ASP PHE THR ASN HIS LEU CYS PHE PRO SEQRES 21 A 667 GLU GLY TRP VAL TRP VAL ILE ARG LEU PRO SER TRP GLU SEQRES 22 A 667 GLY SER PRO ILE ALA ASN LEU MET ASP MET VAL THR TYR SEQRES 23 A 667 ILE LEU GLU CYS ALA ASP ALA GLY VAL PRO GLY ASP GLU SEQRES 24 A 667 LEU PRO SER SER GLU GLU LEU ALA ARG MET PHE GLY LEU SEQRES 25 A 667 LYS PHE GLN TRP VAL THR SER ILE GLY PHE ALA VAL ARG SEQRES 26 A 667 ASN ASP VAL LYS TYR PRO GLU ASP LEU SER ALA TYR GLY SEQRES 27 A 667 THR ARG GLU ALA GLU GLN LYS PHE ASN TYR PHE VAL GLN SEQRES 28 A 667 LYS TYR GLU LEU LEU GLN GLN PHE MET SER ASN PHE GLU SEQRES 29 A 667 LEU ILE GLU ASN LEU TYR GLY PRO GLY THR THR TRP PHE SEQRES 30 A 667 ILE ARG LYS THR LEU ALA TYR GLN SER PRO VAL VAL SER SEQRES 31 A 667 GLY PRO GLY TRP LEU ALA ILE GLY ASP ALA CYS GLY PHE SEQRES 32 A 667 THR ASN PRO LEU TYR SER PRO GLY ILE ASN VAL GLY MET SEQRES 33 A 667 SER THR SER THR TRP ALA ALA GLN LEU SER HIS PRO ILE SEQRES 34 A 667 VAL GLU ILE GLY LYS SER ALA PRO ALA ASP ALA ALA GLU SEQRES 35 A 667 SER SER ILE ARG LYS LEU LEU VAL PRO TYR ASP ASP TYR SEQRES 36 A 667 CYS LYS SER LEU VAL PRO ALA LEU GLU GLN MET ASN ARG SEQRES 37 A 667 PHE ASN TYR VAL CYS TYR ARG ASP THR ARG LEU GLY PRO SEQRES 38 A 667 GLN VAL ALA CYS LEU TRP GLN PHE PHE ALA GLY ILE GLU SEQRES 39 A 667 ARG TYR LEU SER ASP VAL ASN ILE GLU THR PHE ALA HIS SEQRES 40 A 667 TYR ALA ILE LYS TRP VAL TRP GLY ALA MET VAL PRO GLU SEQRES 41 A 667 TYR GLN GLN VAL ALA GLN LYS CYS ILE GLU HIS ILE GLU SEQRES 42 A 667 THR VAL PRO LEU ASP GLU ARG LEU PRO ASP ALA MET VAL SEQRES 43 A 667 ASP GLU LEU LEU ALA PHE SER ASN ARG ILE LYS SER ALA SEQRES 44 A 667 ALA VAL ALA ALA ASP ASP PHE SER LEU ARG TRP ASP ALA SEQRES 45 A 667 ILE LEU ARG SER PHE ASP ARG SER LEU ASN PHE VAL GLU SEQRES 46 A 667 GLY LYS THR SER ARG ASP ILE TYR THR ARG GLN CYS SER SEQRES 47 A 667 GLY CYS GLY ALA TRP LEU GLN LEU ARG PRO ASP TRP LYS SEQRES 48 A 667 LYS CYS HIS SER CYS GLY LEU LEU GLY THR GLU PRO GLN SEQRES 49 A 667 THR ALA VAL THR PHE ASP PRO PRO LEU THR ALA GLU GLU SEQRES 50 A 667 GLU ALA LEU LEU TYR ALA ALA TRP ASN THR ALA PRO LYS SEQRES 51 A 667 TYR ASP PRO SER LYS GLU LEU LYS LEU PRO THR PRO THR SEQRES 52 A 667 ARG PRO ALA ALA HET FAD A 701 53 HET CD A 702 1 HET CD A 703 1 HET CD A 704 1 HET ZN A 705 1 HET SO4 A 706 5 HET SO4 A 707 5 HET SO4 A 708 5 HET SO4 A 709 5 HET CL A 710 1 HET PM7 A 711 25 HET PM7 A 712 25 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM CD CADMIUM ION HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM PM7 (5AS,12AS,13AS)-12,12-DIMETHYL-2,3,11,12,12A,13- HETNAM 2 PM7 HEXAHYDRO-1H,5H,6H-5A,13A-(EPIMINOMETHANO) HETNAM 3 PM7 INDOLIZINO[7,6-B]CARBAZOL-14-ONE HETSYN PM7 PREMALBRANCHEAMIDE E FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 CD 3(CD 2+) FORMUL 6 ZN ZN 2+ FORMUL 7 SO4 4(O4 S 2-) FORMUL 11 CL CL 1- FORMUL 12 PM7 2(C21 H25 N3 O) FORMUL 14 HOH *337(H2 O) HELIX 1 AA1 TYR A 7 ASN A 17 1 11 HELIX 2 AA2 SER A 19 SER A 26 1 8 HELIX 3 AA3 GLY A 46 LYS A 60 1 15 HELIX 4 AA4 LEU A 84 HIS A 94 1 11 HELIX 5 AA5 SER A 97 PHE A 105 1 9 HELIX 6 AA6 GLU A 143 ARG A 157 1 15 HELIX 7 AA7 THR A 207 ARG A 211 5 5 HELIX 8 AA8 PHE A 213 LYS A 217 5 5 HELIX 9 AA9 PRO A 276 GLY A 294 1 19 HELIX 10 AB1 PRO A 296 LEU A 300 5 5 HELIX 11 AB2 SER A 302 PHE A 310 1 9 HELIX 12 AB3 LEU A 334 GLY A 338 5 5 HELIX 13 AB4 ARG A 340 TYR A 353 1 14 HELIX 14 AB5 TYR A 353 SER A 361 1 9 HELIX 15 AB6 GLY A 398 ALA A 400 5 3 HELIX 16 AB7 SER A 409 VAL A 414 1 6 HELIX 17 AB8 GLY A 415 LYS A 434 1 20 HELIX 18 AB9 PRO A 437 LEU A 449 1 13 HELIX 19 AC1 LEU A 449 TYR A 474 1 26 HELIX 20 AC2 ARG A 478 VAL A 483 1 6 HELIX 21 AC3 VAL A 483 ILE A 493 1 11 HELIX 22 AC4 TYR A 496 VAL A 500 5 5 HELIX 23 AC5 THR A 504 LYS A 511 1 8 HELIX 24 AC6 TRP A 512 ALA A 516 5 5 HELIX 25 AC7 VAL A 518 GLU A 533 1 16 HELIX 26 AC8 PRO A 542 ALA A 563 1 22 HELIX 27 AC9 ARG A 569 LEU A 574 1 6 HELIX 28 AD1 THR A 621 ALA A 626 5 6 HELIX 29 AD2 THR A 634 TRP A 645 1 12 SHEET 1 AA1 6 ASN A 161 TYR A 163 0 SHEET 2 AA1 6 ILE A 66 ILE A 69 1 N VAL A 68 O TYR A 163 SHEET 3 AA1 6 VAL A 40 GLY A 43 1 N VAL A 42 O SER A 67 SHEET 4 AA1 6 LEU A 202 ASP A 205 1 O VAL A 204 N GLY A 43 SHEET 5 AA1 6 TRP A 394 ALA A 396 1 O LEU A 395 N ASP A 205 SHEET 6 AA1 6 SER A 390 GLY A 391 -1 N GLY A 391 O TRP A 394 SHEET 1 AA2 2 GLY A 106 LYS A 108 0 SHEET 2 AA2 2 SER A 139 GLN A 141 -1 O SER A 139 N LYS A 108 SHEET 1 AA3 7 TYR A 124 VAL A 130 0 SHEET 2 AA3 7 GLY A 110 LEU A 116 -1 N PHE A 115 O THR A 125 SHEET 3 AA3 7 THR A 254 PHE A 259 1 O CYS A 258 N TYR A 114 SHEET 4 AA3 7 GLY A 262 SER A 271 -1 O GLY A 262 N PHE A 259 SHEET 5 AA3 7 GLN A 315 ARG A 325 -1 O GLN A 315 N SER A 271 SHEET 6 AA3 7 CYS A 228 THR A 236 -1 N PHE A 235 O THR A 318 SHEET 7 AA3 7 TRP A 376 LYS A 380 -1 O ARG A 379 N ALA A 230 SHEET 1 AA4 3 GLU A 167 VAL A 168 0 SHEET 2 AA4 3 ASN A 182 SER A 187 -1 O SER A 187 N GLU A 167 SHEET 3 AA4 3 LYS A 196 SER A 200 -1 O LYS A 196 N VAL A 186 SHEET 1 AA5 2 TYR A 384 GLN A 385 0 SHEET 2 AA5 2 GLY A 402 PHE A 403 -1 O PHE A 403 N TYR A 384 SHEET 1 AA6 2 THR A 594 GLN A 596 0 SHEET 2 AA6 2 TRP A 603 GLN A 605 -1 O LEU A 604 N ARG A 595 LINK OE1 GLU A 11 CD CD A 702 1555 1555 2.70 LINK NE2 HIS A 531 CD CD A 703 1555 1555 2.56 LINK NE2 HIS A 531 CD CD A 703 1555 2655 2.56 LINK OD2 ASP A 547 CD CD A 704 1555 1555 2.68 LINK OE1 GLU A 548 CD CD A 703 1555 1555 2.52 LINK OE2 GLU A 548 CD CD A 703 1555 1555 2.51 LINK OE1 GLU A 548 CD CD A 703 1555 2655 2.52 LINK OE2 GLU A 548 CD CD A 703 1555 2655 2.51 LINK SG CYS A 597 ZN ZN A 705 1555 1555 2.49 LINK SG CYS A 600 ZN ZN A 705 1555 1555 2.29 LINK SG CYS A 613 ZN ZN A 705 1555 1555 2.38 LINK SG CYS A 616 ZN ZN A 705 1555 1555 2.25 LINK CD CD A 702 O HOH A1063 1555 1555 2.65 LINK CD CD A 702 O HOH A1063 1555 2765 2.68 CISPEP 1 ASP A 630 PRO A 631 0 4.96 SITE 1 AC1 38 GLY A 44 GLY A 46 ILE A 47 HIS A 48 SITE 2 AC1 38 ILE A 69 GLU A 70 LYS A 71 ASN A 72 SITE 3 AC1 38 LYS A 78 ILE A 79 GLY A 80 GLU A 81 SITE 4 AC1 38 SER A 82 ARG A 144 GLU A 167 VAL A 168 SITE 5 AC1 38 PHE A 170 ALA A 206 THR A 207 GLY A 208 SITE 6 AC1 38 GLN A 212 ALA A 230 TRP A 265 ARG A 379 SITE 7 AC1 38 ASP A 399 PHE A 403 PRO A 406 SER A 409 SITE 8 AC1 38 GLY A 411 ILE A 412 HOH A 808 HOH A 845 SITE 9 AC1 38 HOH A 884 HOH A 964 HOH A 968 HOH A 969 SITE 10 AC1 38 HOH A1021 HOH A1027 SITE 1 AC2 2 GLU A 11 HOH A1063 SITE 1 AC3 2 HIS A 531 GLU A 548 SITE 1 AC4 2 ASP A 543 ASP A 547 SITE 1 AC5 4 CYS A 597 CYS A 600 CYS A 613 CYS A 616 SITE 1 AC6 4 ASN A 229 TYR A 330 LYS A 380 HOH A 834 SITE 1 AC7 4 PRO A 238 LYS A 239 ASP A 240 HOH A 932 SITE 1 AC8 2 ARG A 220 ARG A 222 SITE 1 AC9 6 PRO A 301 SER A 302 GLU A 305 LYS A 612 SITE 2 AC9 6 GLY A 617 HOH A 947 SITE 1 AD1 3 LYS A 108 LEU A 111 SER A 409 SITE 1 AD2 11 PRO A 85 VAL A 130 GLY A 131 ALA A 132 SITE 2 AD2 11 PRO A 133 LEU A 137 PHE A 489 GLU A 494 SITE 3 AD2 11 TRP A 645 HOH A1088 HOH A1118 SITE 1 AD3 9 GLN A 180 GLY A 433 SER A 435 ALA A 436 SITE 2 AD3 9 PRO A 437 ALA A 438 HIS A 507 ILE A 510 SITE 3 AD3 9 LYS A 655 CRYST1 79.527 121.149 170.118 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012574 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008254 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005878 0.00000