HEADER HYDROLASE 16-JUL-17 5WH9 TITLE STRUCTURE OF BH1999 GENTISYL-COENZYME A THIOESTERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-HYDROXYBENZOYL-COA THIOESTERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS HALODURANS (STRAIN ATCC BAA-125 / DSM SOURCE 3 18197 / FERM 7344 / JCM 9153 / C-125); SOURCE 4 ORGANISM_TAXID: 272558; SOURCE 5 STRAIN: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125; SOURCE 6 GENE: BH1999; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GENTISYL COA THIOESTERASE, HOTDOG FOLD, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.I.FINCI,K.N.ALLEN REVDAT 2 04-OCT-23 5WH9 1 COMPND REVDAT 1 10-OCT-18 5WH9 0 JRNL AUTH L.I.FINCI,K.N.ALLEN JRNL TITL STRUCTURE OF BH1999 GENTISYL-COENZYME A THIOESTERASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.7 REMARK 3 NUMBER OF REFLECTIONS : 21469 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1090 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.2849 - 4.5977 0.96 2901 143 0.2065 0.2478 REMARK 3 2 4.5977 - 3.6503 0.98 2814 154 0.1812 0.2171 REMARK 3 3 3.6503 - 3.1891 0.98 2765 174 0.1996 0.2449 REMARK 3 4 3.1891 - 2.8976 0.97 2731 149 0.2426 0.2798 REMARK 3 5 2.8976 - 2.6900 0.92 2560 122 0.2530 0.3203 REMARK 3 6 2.6900 - 2.5314 0.84 2341 137 0.2636 0.3194 REMARK 3 7 2.5314 - 2.4047 0.79 2209 111 0.2825 0.3145 REMARK 3 8 2.4047 - 2.3000 0.73 2058 100 0.3001 0.3706 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 4132 REMARK 3 ANGLE : 1.965 5582 REMARK 3 CHIRALITY : 0.107 595 REMARK 3 PLANARITY : 0.011 699 REMARK 3 DIHEDRAL : 14.995 1468 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WH9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1000229019. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT REMARK 200 DATA SCALING SOFTWARE : PROTEUM PLUS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21470 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 38.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 200 DATA REDUNDANCY : 2.460 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1BVQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MOPS BUFFER WITH 200 MM NACL REMARK 280 AND AN EQUAL VOLUME OF 0.24 M MALONATE PH 5.8, 18% PEG 3350, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.14100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.14100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 53.65600 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 60.14100 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 161.51600 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 120.28200 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 GLY A 3 REMARK 465 ASN A 112 REMARK 465 PHE A 113 REMARK 465 SER A 114 REMARK 465 ASN A 115 REMARK 465 GLY A 116 REMARK 465 LYS A 117 REMARK 465 LEU A 118 REMARK 465 ALA A 119 REMARK 465 VAL A 120 REMARK 465 ILE A 134 REMARK 465 GLY A 135 REMARK 465 THR A 136 REMARK 465 CYS A 137 REMARK 465 GLU A 138 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 GLY B 3 REMARK 465 LYS B 4 REMARK 465 PHE B 113 REMARK 465 SER B 114 REMARK 465 ASN B 115 REMARK 465 GLY B 116 REMARK 465 LYS B 117 REMARK 465 LEU B 118 REMARK 465 ILE B 134 REMARK 465 GLY B 135 REMARK 465 THR B 136 REMARK 465 CYS B 137 REMARK 465 GLU B 138 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 GLY C 3 REMARK 465 SER C 114 REMARK 465 ASN C 115 REMARK 465 GLY C 116 REMARK 465 ALA C 130 REMARK 465 PHE C 131 REMARK 465 ALA C 132 REMARK 465 ASN C 133 REMARK 465 ILE C 134 REMARK 465 GLY C 135 REMARK 465 THR C 136 REMARK 465 CYS C 137 REMARK 465 GLU C 138 REMARK 465 MET D 1 REMARK 465 GLU D 2 REMARK 465 GLY D 3 REMARK 465 SER D 114 REMARK 465 ASN D 115 REMARK 465 GLY D 116 REMARK 465 LYS D 117 REMARK 465 LEU D 118 REMARK 465 ASN D 133 REMARK 465 ILE D 134 REMARK 465 GLY D 135 REMARK 465 THR D 136 REMARK 465 CYS D 137 REMARK 465 GLU D 138 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN B 133 CG OD1 ND2 REMARK 470 PHE D 113 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 81 CD GLU A 91 1.10 REMARK 500 OE2 GLU B 82 O HOH B 201 1.60 REMARK 500 CD ARG A 81 CG GLU A 91 1.68 REMARK 500 NH2 ARG A 81 OE2 GLU A 91 1.71 REMARK 500 CB SER D 125 NH2 ARG D 128 1.82 REMARK 500 CZ ARG A 81 CD GLU A 91 1.84 REMARK 500 O LYS D 52 N PHE D 113 1.85 REMARK 500 CZ ARG A 81 CG GLU A 91 1.89 REMARK 500 CG2 ILE D 53 OD1 ASN D 112 1.91 REMARK 500 CZ ARG A 81 OE1 GLU A 91 1.96 REMARK 500 CD1 ILE C 53 OD1 ASN C 112 2.13 REMARK 500 NH2 ARG A 81 CG GLU A 91 2.15 REMARK 500 N GLU B 82 O HOH B 202 2.15 REMARK 500 NE ARG A 81 CB GLU A 91 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO C 24 CD PRO C 24 N 0.123 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 68 CA - C - N ANGL. DEV. = -17.4 DEGREES REMARK 500 LEU B 68 O - C - N ANGL. DEV. = 16.7 DEGREES REMARK 500 GLN C 63 CA - C - N ANGL. DEV. = 18.0 DEGREES REMARK 500 GLN C 63 O - C - N ANGL. DEV. = -19.7 DEGREES REMARK 500 PHE C 64 C - N - CA ANGL. DEV. = 20.8 DEGREES REMARK 500 SER C 126 C - N - CA ANGL. DEV. = 31.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 16 -169.98 -124.83 REMARK 500 ALA A 71 -9.03 82.98 REMARK 500 LEU A 83 97.11 -164.85 REMARK 500 LYS A 84 -166.63 -101.41 REMARK 500 ALA A 132 44.89 -79.74 REMARK 500 ALA B 71 -2.58 85.04 REMARK 500 GLU B 82 57.20 -145.64 REMARK 500 ALA B 132 39.71 -90.66 REMARK 500 ALA C 71 -3.53 82.87 REMARK 500 PRO C 124 -153.12 -82.89 REMARK 500 LYS D 52 15.50 84.79 REMARK 500 ALA D 71 -8.65 85.83 REMARK 500 VAL D 109 -168.07 -118.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER C 125 SER C 126 117.98 REMARK 500 PHE D 22 TYR D 23 -148.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLN C 63 11.56 REMARK 500 PHE D 22 16.98 REMARK 500 REMARK 500 REMARK: NULL DBREF 5WH9 A 1 138 UNP Q9KBC9 Q9KBC9_BACHD 1 138 DBREF 5WH9 B 1 138 UNP Q9KBC9 Q9KBC9_BACHD 1 138 DBREF 5WH9 C 1 138 UNP Q9KBC9 Q9KBC9_BACHD 1 138 DBREF 5WH9 D 1 138 UNP Q9KBC9 Q9KBC9_BACHD 1 138 SEQRES 1 A 138 MET GLU GLY LYS VAL TYR HIS PHE ARG VAL LYS PHE GLY SEQRES 2 A 138 ASP THR ASP ALA ALA GLY ILE VAL PHE TYR PRO ASN TYR SEQRES 3 A 138 TYR LYS TRP MET ASP GLU ALA CYS HIS HIS PHE LEU THR SEQRES 4 A 138 GLU LEU GLY PHE PRO THR SER GLU LEU ILE ASP LYS LYS SEQRES 5 A 138 ILE GLY PHE PRO ILE VAL GLU ALA THR CYS GLN PHE LYS SEQRES 6 A 138 ALA PRO LEU LEU PHE ALA ASP HIS VAL PHE ILE ARG THR SEQRES 7 A 138 SER ILE ARG GLU LEU LYS ASP LYS SER PHE ILE LEU GLU SEQRES 8 A 138 HIS HIS PHE ILE LYS GLN GLY ARG VAL ILE ALA SER GLY SEQRES 9 A 138 HIS GLU LYS ARG VAL TRP ALA ASN PHE SER ASN GLY LYS SEQRES 10 A 138 LEU ALA VAL CYS PRO ILE PRO SER SER VAL ARG VAL ALA SEQRES 11 A 138 PHE ALA ASN ILE GLY THR CYS GLU SEQRES 1 B 138 MET GLU GLY LYS VAL TYR HIS PHE ARG VAL LYS PHE GLY SEQRES 2 B 138 ASP THR ASP ALA ALA GLY ILE VAL PHE TYR PRO ASN TYR SEQRES 3 B 138 TYR LYS TRP MET ASP GLU ALA CYS HIS HIS PHE LEU THR SEQRES 4 B 138 GLU LEU GLY PHE PRO THR SER GLU LEU ILE ASP LYS LYS SEQRES 5 B 138 ILE GLY PHE PRO ILE VAL GLU ALA THR CYS GLN PHE LYS SEQRES 6 B 138 ALA PRO LEU LEU PHE ALA ASP HIS VAL PHE ILE ARG THR SEQRES 7 B 138 SER ILE ARG GLU LEU LYS ASP LYS SER PHE ILE LEU GLU SEQRES 8 B 138 HIS HIS PHE ILE LYS GLN GLY ARG VAL ILE ALA SER GLY SEQRES 9 B 138 HIS GLU LYS ARG VAL TRP ALA ASN PHE SER ASN GLY LYS SEQRES 10 B 138 LEU ALA VAL CYS PRO ILE PRO SER SER VAL ARG VAL ALA SEQRES 11 B 138 PHE ALA ASN ILE GLY THR CYS GLU SEQRES 1 C 138 MET GLU GLY LYS VAL TYR HIS PHE ARG VAL LYS PHE GLY SEQRES 2 C 138 ASP THR ASP ALA ALA GLY ILE VAL PHE TYR PRO ASN TYR SEQRES 3 C 138 TYR LYS TRP MET ASP GLU ALA CYS HIS HIS PHE LEU THR SEQRES 4 C 138 GLU LEU GLY PHE PRO THR SER GLU LEU ILE ASP LYS LYS SEQRES 5 C 138 ILE GLY PHE PRO ILE VAL GLU ALA THR CYS GLN PHE LYS SEQRES 6 C 138 ALA PRO LEU LEU PHE ALA ASP HIS VAL PHE ILE ARG THR SEQRES 7 C 138 SER ILE ARG GLU LEU LYS ASP LYS SER PHE ILE LEU GLU SEQRES 8 C 138 HIS HIS PHE ILE LYS GLN GLY ARG VAL ILE ALA SER GLY SEQRES 9 C 138 HIS GLU LYS ARG VAL TRP ALA ASN PHE SER ASN GLY LYS SEQRES 10 C 138 LEU ALA VAL CYS PRO ILE PRO SER SER VAL ARG VAL ALA SEQRES 11 C 138 PHE ALA ASN ILE GLY THR CYS GLU SEQRES 1 D 138 MET GLU GLY LYS VAL TYR HIS PHE ARG VAL LYS PHE GLY SEQRES 2 D 138 ASP THR ASP ALA ALA GLY ILE VAL PHE TYR PRO ASN TYR SEQRES 3 D 138 TYR LYS TRP MET ASP GLU ALA CYS HIS HIS PHE LEU THR SEQRES 4 D 138 GLU LEU GLY PHE PRO THR SER GLU LEU ILE ASP LYS LYS SEQRES 5 D 138 ILE GLY PHE PRO ILE VAL GLU ALA THR CYS GLN PHE LYS SEQRES 6 D 138 ALA PRO LEU LEU PHE ALA ASP HIS VAL PHE ILE ARG THR SEQRES 7 D 138 SER ILE ARG GLU LEU LYS ASP LYS SER PHE ILE LEU GLU SEQRES 8 D 138 HIS HIS PHE ILE LYS GLN GLY ARG VAL ILE ALA SER GLY SEQRES 9 D 138 HIS GLU LYS ARG VAL TRP ALA ASN PHE SER ASN GLY LYS SEQRES 10 D 138 LEU ALA VAL CYS PRO ILE PRO SER SER VAL ARG VAL ALA SEQRES 11 D 138 PHE ALA ASN ILE GLY THR CYS GLU FORMUL 5 HOH *162(H2 O) HELIX 1 AA1 LYS A 11 THR A 15 5 5 HELIX 2 AA2 PRO A 24 LEU A 41 1 18 HELIX 3 AA3 PRO A 44 LYS A 51 1 8 HELIX 4 AA4 PRO A 124 ALA A 132 1 9 HELIX 5 AA5 LYS B 11 THR B 15 5 5 HELIX 6 AA6 PRO B 24 LEU B 41 1 18 HELIX 7 AA7 PRO B 44 LYS B 51 1 8 HELIX 8 AA8 PRO B 124 ALA B 132 1 9 HELIX 9 AA9 LYS C 11 THR C 15 5 5 HELIX 10 AB1 TYR C 23 LEU C 41 1 19 HELIX 11 AB2 PRO C 44 LYS C 51 1 8 HELIX 12 AB3 LYS D 11 THR D 15 5 5 HELIX 13 AB4 PRO D 24 LEU D 41 1 18 HELIX 14 AB5 PRO D 44 ILE D 49 1 6 HELIX 15 AB6 PRO D 124 PHE D 131 1 8 SHEET 1 AA110 VAL A 5 ARG A 9 0 SHEET 2 AA110 HIS A 73 LEU A 83 -1 O VAL A 74 N PHE A 8 SHEET 3 AA110 SER A 87 LYS A 96 -1 O GLU A 91 N SER A 79 SHEET 4 AA110 ARG A 99 VAL A 109 -1 O ILE A 101 N PHE A 94 SHEET 5 AA110 ILE A 57 PHE A 64 -1 N GLN A 63 O SER A 103 SHEET 6 AA110 ILE B 57 PHE B 64 -1 O VAL B 58 N PHE A 64 SHEET 7 AA110 ARG B 99 VAL B 109 -1 O LYS B 107 N VAL B 58 SHEET 8 AA110 SER B 87 LYS B 96 -1 N PHE B 88 O ARG B 108 SHEET 9 AA110 HIS B 73 ILE B 80 -1 N PHE B 75 O ILE B 95 SHEET 10 AA110 TYR B 6 ARG B 9 -1 N PHE B 8 O VAL B 74 SHEET 1 AA2 8 VAL C 5 ARG C 9 0 SHEET 2 AA2 8 HIS C 73 LEU C 83 -1 O VAL C 74 N PHE C 8 SHEET 3 AA2 8 SER C 87 LYS C 96 -1 O ILE C 89 N ARG C 81 SHEET 4 AA2 8 ARG C 99 VAL C 109 -1 O ALA C 102 N PHE C 94 SHEET 5 AA2 8 ILE C 57 PHE C 64 -1 N GLU C 59 O LYS C 107 SHEET 6 AA2 8 ILE D 57 PHE D 64 -1 O ALA D 60 N CYS C 62 SHEET 7 AA2 8 ARG D 99 ASN D 112 -1 O LYS D 107 N VAL D 58 SHEET 8 AA2 8 ILE D 53 GLY D 54 -1 N GLY D 54 O ALA D 111 SHEET 1 AA3 5 VAL D 5 ARG D 9 0 SHEET 2 AA3 5 HIS D 73 LEU D 83 -1 O VAL D 74 N PHE D 8 SHEET 3 AA3 5 SER D 87 LYS D 96 -1 O ILE D 95 N PHE D 75 SHEET 4 AA3 5 ARG D 99 ASN D 112 -1 O GLY D 104 N HIS D 92 SHEET 5 AA3 5 VAL D 120 CYS D 121 -1 O CYS D 121 N TRP D 110 SHEET 1 AA4 3 ILE C 53 GLY C 54 0 SHEET 2 AA4 3 ALA C 111 ASN C 112 -1 O ALA C 111 N GLY C 54 SHEET 3 AA4 3 ALA C 119 VAL C 120 -1 O ALA C 119 N ASN C 112 LINK NE ARG A 81 CG GLU A 91 1555 1555 1.57 LINK NH2 ARG A 81 OE1 GLU A 91 1555 1555 1.36 CRYST1 53.656 80.758 120.282 90.00 90.00 90.00 P 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018637 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012383 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008314 0.00000