HEADER TOXIN 18-JUL-17 5WHT TITLE CRYSTAL STRUCTURE OF 3'SL BOUND PLTB COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE PERTUSSIS-LIKE TOXIN SUBUNIT; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHI; SOURCE 3 ORGANISM_TAXID: 90370; SOURCE 4 GENE: STY1891, T1107; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS BACTERIAL TOXIN, GLYCAN, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR X.GAO,J.E.GALAN REVDAT 5 04-OCT-23 5WHT 1 HETSYN LINK REVDAT 4 29-JUL-20 5WHT 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 11-DEC-19 5WHT 1 REMARK REVDAT 2 06-DEC-17 5WHT 1 JRNL REVDAT 1 25-OCT-17 5WHT 0 JRNL AUTH X.GAO,L.DENG,G.STACK,H.YU,X.CHEN,Y.NAITO-MATSUI,A.VARKI, JRNL AUTH 2 J.E.GALAN JRNL TITL EVOLUTION OF HOST ADAPTATION IN THE SALMONELLA TYPHOID JRNL TITL 2 TOXIN. JRNL REF NAT MICROBIOL V. 2 1592 2017 JRNL REFN ESSN 2058-5276 JRNL PMID 28993610 JRNL DOI 10.1038/S41564-017-0033-2 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 50838 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 2466 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.4388 - 5.0468 0.98 2862 160 0.1545 0.1853 REMARK 3 2 5.0468 - 4.0123 0.99 2749 132 0.1163 0.1656 REMARK 3 3 4.0123 - 3.5071 0.99 2761 141 0.1382 0.1545 REMARK 3 4 3.5071 - 3.1873 1.00 2728 153 0.1508 0.2236 REMARK 3 5 3.1873 - 2.9593 0.98 2718 127 0.1753 0.2156 REMARK 3 6 2.9593 - 2.7851 0.96 2629 137 0.1897 0.2181 REMARK 3 7 2.7851 - 2.6458 0.97 2619 139 0.1853 0.3027 REMARK 3 8 2.6458 - 2.5308 0.97 2628 128 0.1807 0.1908 REMARK 3 9 2.5308 - 2.4335 0.98 2657 136 0.1835 0.2861 REMARK 3 10 2.4335 - 2.3496 0.98 2643 135 0.1948 0.2291 REMARK 3 11 2.3496 - 2.2762 0.98 2658 142 0.1737 0.2553 REMARK 3 12 2.2762 - 2.2112 0.99 2710 116 0.1724 0.2223 REMARK 3 13 2.2112 - 2.1530 0.99 2648 149 0.1673 0.2442 REMARK 3 14 2.1530 - 2.1005 0.99 2685 131 0.1736 0.2343 REMARK 3 15 2.1005 - 2.0528 0.99 2685 131 0.1809 0.2802 REMARK 3 16 2.0528 - 2.0091 1.00 2682 128 0.1687 0.2172 REMARK 3 17 2.0091 - 1.9689 0.99 2651 159 0.1934 0.2603 REMARK 3 18 1.9689 - 1.9318 0.98 2659 122 0.2014 0.2767 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4764 REMARK 3 ANGLE : 1.080 6474 REMARK 3 CHIRALITY : 0.071 732 REMARK 3 PLANARITY : 0.004 810 REMARK 3 DIHEDRAL : 14.774 1616 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 30 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5297 17.6328 7.2199 REMARK 3 T TENSOR REMARK 3 T11: 0.2720 T22: 0.2420 REMARK 3 T33: 0.2031 T12: 0.0217 REMARK 3 T13: -0.0107 T23: 0.0353 REMARK 3 L TENSOR REMARK 3 L11: 8.4863 L22: 4.7628 REMARK 3 L33: 3.0326 L12: -5.5885 REMARK 3 L13: -4.4941 L23: 3.6471 REMARK 3 S TENSOR REMARK 3 S11: -0.4351 S12: -0.2895 S13: 0.0754 REMARK 3 S21: 0.2334 S22: 0.3932 S23: -0.1264 REMARK 3 S31: 0.1935 S32: 0.1808 S33: 0.0225 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1574 31.2463 -0.1875 REMARK 3 T TENSOR REMARK 3 T11: 0.1885 T22: 0.1733 REMARK 3 T33: 0.1201 T12: -0.0042 REMARK 3 T13: -0.0191 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 5.7217 L22: 3.6457 REMARK 3 L33: 6.7411 L12: 3.1127 REMARK 3 L13: -4.6267 L23: -3.8478 REMARK 3 S TENSOR REMARK 3 S11: 0.0669 S12: -0.1687 S13: 0.0913 REMARK 3 S21: 0.1749 S22: -0.0812 S23: 0.0422 REMARK 3 S31: -0.2421 S32: 0.2102 S33: 0.0042 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5511 29.2856 -2.8043 REMARK 3 T TENSOR REMARK 3 T11: 0.1529 T22: 0.2090 REMARK 3 T33: 0.1621 T12: -0.0198 REMARK 3 T13: -0.0166 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 6.9153 L22: 5.2231 REMARK 3 L33: 3.7301 L12: -5.6479 REMARK 3 L13: -4.9367 L23: 4.3788 REMARK 3 S TENSOR REMARK 3 S11: 0.0872 S12: 0.4533 S13: 0.5212 REMARK 3 S21: -0.1855 S22: -0.0699 S23: -0.4107 REMARK 3 S31: 0.0846 S32: -0.0565 S33: -0.1654 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.4660 22.9581 -6.8770 REMARK 3 T TENSOR REMARK 3 T11: 0.2060 T22: 0.2163 REMARK 3 T33: 0.1800 T12: -0.0095 REMARK 3 T13: 0.0062 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 2.2201 L22: 0.4571 REMARK 3 L33: 1.3895 L12: -0.7183 REMARK 3 L13: 0.6866 L23: -0.6523 REMARK 3 S TENSOR REMARK 3 S11: -0.0239 S12: 0.6208 S13: -0.1017 REMARK 3 S21: -0.0773 S22: 0.0240 S23: 0.0676 REMARK 3 S31: 0.0949 S32: -0.0584 S33: -0.0199 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3686 28.5576 2.9458 REMARK 3 T TENSOR REMARK 3 T11: 0.2310 T22: 0.2521 REMARK 3 T33: 0.1266 T12: 0.0116 REMARK 3 T13: -0.0107 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 3.8796 L22: 5.9432 REMARK 3 L33: 1.9010 L12: 2.7393 REMARK 3 L13: -0.2165 L23: -0.9963 REMARK 3 S TENSOR REMARK 3 S11: 0.0255 S12: -0.1180 S13: -0.0350 REMARK 3 S21: 0.4085 S22: -0.0500 S23: -0.3418 REMARK 3 S31: -0.2390 S32: 0.2127 S33: 0.0297 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.4526 12.1669 5.9580 REMARK 3 T TENSOR REMARK 3 T11: 0.3891 T22: 0.3965 REMARK 3 T33: 0.3304 T12: -0.0342 REMARK 3 T13: 0.0389 T23: 0.0906 REMARK 3 L TENSOR REMARK 3 L11: 5.0482 L22: 7.0309 REMARK 3 L33: 7.4117 L12: 2.8964 REMARK 3 L13: -3.1825 L23: -0.1366 REMARK 3 S TENSOR REMARK 3 S11: 0.5969 S12: -1.1534 S13: -0.4494 REMARK 3 S21: 1.3133 S22: -0.1522 S23: 0.4772 REMARK 3 S31: -0.4437 S32: -0.9720 S33: -0.3917 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1882 13.1422 12.2595 REMARK 3 T TENSOR REMARK 3 T11: 0.6605 T22: 0.4997 REMARK 3 T33: 0.9734 T12: 0.5591 REMARK 3 T13: -0.0131 T23: 0.4293 REMARK 3 L TENSOR REMARK 3 L11: 2.0001 L22: 2.0002 REMARK 3 L33: 1.9999 L12: 1.9998 REMARK 3 L13: 2.0000 L23: 1.9999 REMARK 3 S TENSOR REMARK 3 S11: 3.8772 S12: 4.7313 S13: -0.8589 REMARK 3 S21: -4.8625 S22: 0.3611 S23: 8.8558 REMARK 3 S31: -2.6317 S32: -6.2280 S33: -4.2634 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 24 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.9790 46.3434 -7.1469 REMARK 3 T TENSOR REMARK 3 T11: 0.3410 T22: 0.2298 REMARK 3 T33: 0.1974 T12: -0.0750 REMARK 3 T13: 0.0108 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 3.6008 L22: 7.8999 REMARK 3 L33: 5.2889 L12: -5.0520 REMARK 3 L13: 1.7272 L23: -0.8989 REMARK 3 S TENSOR REMARK 3 S11: -0.0042 S12: -0.1932 S13: 0.5884 REMARK 3 S21: 0.4813 S22: -0.0525 S23: -0.3686 REMARK 3 S31: -0.8711 S32: 0.2518 S33: 0.0827 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9195 40.5682 -22.8151 REMARK 3 T TENSOR REMARK 3 T11: 0.2431 T22: 0.2122 REMARK 3 T33: 0.2398 T12: 0.0240 REMARK 3 T13: 0.0215 T23: 0.0440 REMARK 3 L TENSOR REMARK 3 L11: 7.2288 L22: 0.1108 REMARK 3 L33: 5.0142 L12: -1.1685 REMARK 3 L13: -6.0387 L23: 0.9182 REMARK 3 S TENSOR REMARK 3 S11: 0.0673 S12: 0.3090 S13: -0.0361 REMARK 3 S21: 0.0061 S22: -0.0899 S23: 0.0770 REMARK 3 S31: -0.1873 S32: -0.4321 S33: -0.0505 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 60 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1812 39.0356 -15.4848 REMARK 3 T TENSOR REMARK 3 T11: 0.2217 T22: 0.1709 REMARK 3 T33: 0.1203 T12: 0.0090 REMARK 3 T13: -0.0026 T23: 0.0462 REMARK 3 L TENSOR REMARK 3 L11: 4.8399 L22: 1.7536 REMARK 3 L33: 2.7532 L12: 0.7110 REMARK 3 L13: -1.4816 L23: -0.1993 REMARK 3 S TENSOR REMARK 3 S11: 0.0638 S12: 0.0983 S13: 0.0502 REMARK 3 S21: 0.0796 S22: -0.0000 S23: 0.0156 REMARK 3 S31: -0.0226 S32: -0.1417 S33: -0.0520 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1674 46.8494 -21.5259 REMARK 3 T TENSOR REMARK 3 T11: 0.2057 T22: 0.1528 REMARK 3 T33: 0.2227 T12: 0.0018 REMARK 3 T13: 0.0342 T23: 0.0330 REMARK 3 L TENSOR REMARK 3 L11: 2.0496 L22: 4.5223 REMARK 3 L33: 8.1386 L12: 1.3964 REMARK 3 L13: -0.9679 L23: -4.3370 REMARK 3 S TENSOR REMARK 3 S11: 0.0382 S12: 0.0962 S13: 0.2883 REMARK 3 S21: 0.1338 S22: -0.1314 S23: -0.0595 REMARK 3 S31: -0.5814 S32: 0.3487 S33: 0.0810 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 128 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5145 41.8461 -0.1777 REMARK 3 T TENSOR REMARK 3 T11: 0.3242 T22: 0.2881 REMARK 3 T33: 0.3200 T12: -0.0615 REMARK 3 T13: 0.0502 T23: -0.0582 REMARK 3 L TENSOR REMARK 3 L11: 4.2440 L22: 4.5480 REMARK 3 L33: 6.3674 L12: 4.2082 REMARK 3 L13: -3.8349 L23: -4.7596 REMARK 3 S TENSOR REMARK 3 S11: 0.8703 S12: -0.7842 S13: 1.0487 REMARK 3 S21: 0.8193 S22: -0.3530 S23: 0.1275 REMARK 3 S31: -0.8014 S32: 0.1017 S33: -0.4805 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 24 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.9642 -4.7427 -14.9054 REMARK 3 T TENSOR REMARK 3 T11: 0.2631 T22: 0.1687 REMARK 3 T33: 0.2377 T12: -0.0075 REMARK 3 T13: -0.0093 T23: -0.0450 REMARK 3 L TENSOR REMARK 3 L11: 8.5479 L22: 3.2187 REMARK 3 L33: 7.5155 L12: -2.2664 REMARK 3 L13: -7.0235 L23: 1.1783 REMARK 3 S TENSOR REMARK 3 S11: -0.2668 S12: 0.1112 S13: -0.6293 REMARK 3 S21: 0.1767 S22: 0.0287 S23: 0.1907 REMARK 3 S31: 0.5949 S32: -0.0331 S33: 0.2700 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 37 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7739 9.9148 -4.4916 REMARK 3 T TENSOR REMARK 3 T11: 0.1923 T22: 0.1717 REMARK 3 T33: 0.1498 T12: 0.0130 REMARK 3 T13: 0.0084 T23: 0.0395 REMARK 3 L TENSOR REMARK 3 L11: 8.7116 L22: 5.9545 REMARK 3 L33: 1.5649 L12: 6.7009 REMARK 3 L13: 2.8784 L23: 2.9237 REMARK 3 S TENSOR REMARK 3 S11: 0.1117 S12: -0.1607 S13: -0.1580 REMARK 3 S21: 0.0048 S22: -0.1722 S23: -0.1294 REMARK 3 S31: 0.0507 S32: -0.0606 S33: 0.0626 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 60 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6986 6.6488 -10.9461 REMARK 3 T TENSOR REMARK 3 T11: 0.1732 T22: 0.1308 REMARK 3 T33: 0.0937 T12: -0.0079 REMARK 3 T13: -0.0072 T23: -0.0264 REMARK 3 L TENSOR REMARK 3 L11: 5.5998 L22: 2.8476 REMARK 3 L33: 2.9127 L12: 0.1537 REMARK 3 L13: -0.4780 L23: 0.5722 REMARK 3 S TENSOR REMARK 3 S11: -0.0339 S12: 0.0272 S13: -0.0175 REMARK 3 S21: -0.0283 S22: 0.0428 S23: -0.0897 REMARK 3 S31: 0.1099 S32: -0.0698 S33: -0.0103 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 105 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0469 2.8175 -3.3541 REMARK 3 T TENSOR REMARK 3 T11: 0.2265 T22: 0.1925 REMARK 3 T33: 0.2160 T12: 0.0141 REMARK 3 T13: 0.0142 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 4.4002 L22: 2.0265 REMARK 3 L33: 5.6017 L12: 1.0567 REMARK 3 L13: 3.3717 L23: 1.3370 REMARK 3 S TENSOR REMARK 3 S11: 0.0008 S12: -0.2446 S13: -0.1611 REMARK 3 S21: 0.2488 S22: -0.0144 S23: -0.0934 REMARK 3 S31: 0.1364 S32: 0.0411 S33: 0.0308 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 128 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4741 -2.8068 -19.1913 REMARK 3 T TENSOR REMARK 3 T11: 0.4686 T22: 0.5500 REMARK 3 T33: 0.5044 T12: -0.1575 REMARK 3 T13: -0.0202 T23: -0.1863 REMARK 3 L TENSOR REMARK 3 L11: 8.7961 L22: 6.0080 REMARK 3 L33: 6.1057 L12: -0.6011 REMARK 3 L13: -2.2679 L23: -0.5270 REMARK 3 S TENSOR REMARK 3 S11: 0.3347 S12: 0.5304 S13: -1.1882 REMARK 3 S21: 0.2419 S22: -0.6538 S23: 0.9985 REMARK 3 S31: 1.1968 S32: -1.5604 S33: 0.3577 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 24 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.8459 11.3788 -44.7087 REMARK 3 T TENSOR REMARK 3 T11: 0.4776 T22: 0.3857 REMARK 3 T33: 0.2567 T12: -0.0132 REMARK 3 T13: -0.0355 T23: -0.0571 REMARK 3 L TENSOR REMARK 3 L11: 8.2454 L22: 5.6322 REMARK 3 L33: 5.5902 L12: -0.7906 REMARK 3 L13: -3.0077 L23: 1.2231 REMARK 3 S TENSOR REMARK 3 S11: 0.0374 S12: 1.0081 S13: -0.3888 REMARK 3 S21: -0.4833 S22: 0.0045 S23: 0.2038 REMARK 3 S31: 0.9391 S32: -0.0674 S33: -0.0238 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 32 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2496 5.5807 -28.2310 REMARK 3 T TENSOR REMARK 3 T11: 0.2617 T22: 0.2231 REMARK 3 T33: 0.2139 T12: -0.0258 REMARK 3 T13: -0.0006 T23: -0.0676 REMARK 3 L TENSOR REMARK 3 L11: 3.7977 L22: 1.8722 REMARK 3 L33: 2.0614 L12: -1.1001 REMARK 3 L13: 0.7780 L23: -1.4595 REMARK 3 S TENSOR REMARK 3 S11: -0.0404 S12: -0.1521 S13: -0.0223 REMARK 3 S21: -0.1975 S22: 0.1726 S23: 0.1665 REMARK 3 S31: 0.1787 S32: -0.2354 S33: -0.1579 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 60 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2805 4.3528 -31.3519 REMARK 3 T TENSOR REMARK 3 T11: 0.2502 T22: 0.1605 REMARK 3 T33: 0.2110 T12: -0.0272 REMARK 3 T13: -0.0369 T23: -0.0358 REMARK 3 L TENSOR REMARK 3 L11: 7.5107 L22: 2.6431 REMARK 3 L33: 2.1739 L12: -0.9921 REMARK 3 L13: -2.3195 L23: -1.2590 REMARK 3 S TENSOR REMARK 3 S11: -0.3189 S12: 0.3938 S13: -0.2895 REMARK 3 S21: -0.2941 S22: 0.2904 S23: 0.3469 REMARK 3 S31: 0.2201 S32: -0.1033 S33: 0.0434 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 77 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.4158 14.7374 -28.0136 REMARK 3 T TENSOR REMARK 3 T11: 0.2594 T22: 0.1931 REMARK 3 T33: 0.1716 T12: 0.0020 REMARK 3 T13: -0.0261 T23: -0.0387 REMARK 3 L TENSOR REMARK 3 L11: 4.4170 L22: 1.0583 REMARK 3 L33: 2.7260 L12: -0.1320 REMARK 3 L13: -1.8820 L23: -0.7046 REMARK 3 S TENSOR REMARK 3 S11: -0.1579 S12: 0.2350 S13: 0.0869 REMARK 3 S21: -0.0645 S22: 0.0834 S23: 0.0125 REMARK 3 S31: -0.0609 S32: -0.1084 S33: 0.0763 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 96 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6321 3.9362 -33.2205 REMARK 3 T TENSOR REMARK 3 T11: 0.2803 T22: 0.2556 REMARK 3 T33: 0.2361 T12: -0.0431 REMARK 3 T13: -0.0147 T23: -0.0581 REMARK 3 L TENSOR REMARK 3 L11: 2.2980 L22: 3.1445 REMARK 3 L33: 1.2494 L12: -1.6962 REMARK 3 L13: 0.0102 L23: -0.4119 REMARK 3 S TENSOR REMARK 3 S11: -0.0494 S12: 0.1542 S13: -0.1282 REMARK 3 S21: -0.2800 S22: 0.0912 S23: 0.1007 REMARK 3 S31: 0.1640 S32: -0.0158 S33: -0.0281 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 128 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6238 17.2640 -41.1261 REMARK 3 T TENSOR REMARK 3 T11: 0.3881 T22: 0.5069 REMARK 3 T33: 0.4112 T12: -0.0138 REMARK 3 T13: -0.1222 T23: 0.0449 REMARK 3 L TENSOR REMARK 3 L11: 8.6494 L22: 7.3631 REMARK 3 L33: 5.7395 L12: 2.4857 REMARK 3 L13: -4.2364 L23: 1.6037 REMARK 3 S TENSOR REMARK 3 S11: 0.5055 S12: 0.6398 S13: -0.5079 REMARK 3 S21: -0.7229 S22: 0.0429 S23: 0.4159 REMARK 3 S31: -0.1785 S32: -0.9518 S33: -0.4458 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 24 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7073 41.6552 -37.9376 REMARK 3 T TENSOR REMARK 3 T11: 0.3593 T22: 0.2202 REMARK 3 T33: 0.2771 T12: 0.0055 REMARK 3 T13: -0.0217 T23: 0.0689 REMARK 3 L TENSOR REMARK 3 L11: 5.4771 L22: 1.4289 REMARK 3 L33: 3.3567 L12: 2.8033 REMARK 3 L13: -1.3111 L23: -0.5748 REMARK 3 S TENSOR REMARK 3 S11: 0.0191 S12: 0.3534 S13: 0.6508 REMARK 3 S21: -0.3524 S22: 0.1087 S23: 0.2319 REMARK 3 S31: -0.2957 S32: -0.0595 S33: -0.0705 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 37 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7533 23.9541 -36.8541 REMARK 3 T TENSOR REMARK 3 T11: 0.2817 T22: 0.2813 REMARK 3 T33: 0.2224 T12: 0.0036 REMARK 3 T13: -0.0013 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 6.7711 L22: 3.8713 REMARK 3 L33: 0.5437 L12: -4.9332 REMARK 3 L13: -0.8536 L23: 0.5552 REMARK 3 S TENSOR REMARK 3 S11: 0.2205 S12: 0.4614 S13: 0.1327 REMARK 3 S21: -0.4839 S22: -0.2037 S23: -0.0908 REMARK 3 S31: -0.0196 S32: -0.0684 S33: -0.0472 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 60 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5202 30.4125 -39.3140 REMARK 3 T TENSOR REMARK 3 T11: 0.3111 T22: 0.2238 REMARK 3 T33: 0.1462 T12: -0.0075 REMARK 3 T13: -0.0276 T23: 0.0458 REMARK 3 L TENSOR REMARK 3 L11: 6.9595 L22: 4.3032 REMARK 3 L33: 2.5821 L12: -0.8283 REMARK 3 L13: -2.5501 L23: 1.2005 REMARK 3 S TENSOR REMARK 3 S11: 0.1161 S12: 0.4250 S13: -0.2692 REMARK 3 S21: -0.4652 S22: -0.0920 S23: 0.2648 REMARK 3 S31: -0.0979 S32: -0.2359 S33: -0.0244 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 79 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7481 27.8854 -27.8614 REMARK 3 T TENSOR REMARK 3 T11: 0.2683 T22: 0.1980 REMARK 3 T33: 0.2122 T12: 0.0238 REMARK 3 T13: 0.0075 T23: 0.0433 REMARK 3 L TENSOR REMARK 3 L11: 4.1329 L22: 2.6356 REMARK 3 L33: 3.0797 L12: 2.5618 REMARK 3 L13: -3.2175 L23: -1.4440 REMARK 3 S TENSOR REMARK 3 S11: -0.3185 S12: -0.7365 S13: -0.4597 REMARK 3 S21: 0.2566 S22: 0.0331 S23: -0.2628 REMARK 3 S31: 0.0207 S32: 0.2026 S33: 0.2425 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 96 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.0807 32.8614 -39.8013 REMARK 3 T TENSOR REMARK 3 T11: 0.2743 T22: 0.2558 REMARK 3 T33: 0.1634 T12: -0.0302 REMARK 3 T13: -0.0540 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 3.9321 L22: 3.3831 REMARK 3 L33: 1.9121 L12: -0.0469 REMARK 3 L13: -0.8189 L23: -1.3012 REMARK 3 S TENSOR REMARK 3 S11: -0.0489 S12: 0.6160 S13: -0.0309 REMARK 3 S21: -0.4601 S22: -0.0121 S23: -0.0242 REMARK 3 S31: 0.0159 S32: -0.1454 S33: 0.0654 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 111 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7672 23.6940 -47.0945 REMARK 3 T TENSOR REMARK 3 T11: 0.5386 T22: 0.3950 REMARK 3 T33: 0.2265 T12: -0.0019 REMARK 3 T13: -0.0149 T23: -0.0494 REMARK 3 L TENSOR REMARK 3 L11: 8.4574 L22: 4.6710 REMARK 3 L33: 7.0203 L12: -1.1033 REMARK 3 L13: -4.5312 L23: -3.9750 REMARK 3 S TENSOR REMARK 3 S11: -0.1943 S12: 0.7770 S13: -0.7284 REMARK 3 S21: -1.3080 S22: 0.3227 S23: 0.1614 REMARK 3 S31: 0.0936 S32: -0.2694 S33: -0.1167 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 121 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6215 40.9713 -30.7788 REMARK 3 T TENSOR REMARK 3 T11: 0.2452 T22: 0.2200 REMARK 3 T33: 0.2976 T12: 0.0019 REMARK 3 T13: -0.0660 T23: 0.0235 REMARK 3 L TENSOR REMARK 3 L11: 5.6189 L22: 7.4624 REMARK 3 L33: 8.3008 L12: -0.6024 REMARK 3 L13: -3.7275 L23: 3.3779 REMARK 3 S TENSOR REMARK 3 S11: -0.0904 S12: 0.0120 S13: 0.1081 REMARK 3 S21: -0.3682 S22: -0.1857 S23: 1.1010 REMARK 3 S31: -0.3613 S32: -0.2702 S33: 0.2279 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WHT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1000229048. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 130 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51433 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4RHR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1500, PH 4.6, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.18950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.58650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.84100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.58650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.18950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.84100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 TYR A 2 REMARK 465 MET A 3 REMARK 465 SER A 4 REMARK 465 LYS A 5 REMARK 465 TYR A 6 REMARK 465 VAL A 7 REMARK 465 PRO A 8 REMARK 465 VAL A 9 REMARK 465 TYR A 10 REMARK 465 THR A 11 REMARK 465 LEU A 12 REMARK 465 LEU A 13 REMARK 465 ILE A 14 REMARK 465 LEU A 15 REMARK 465 ILE A 16 REMARK 465 TYR A 17 REMARK 465 SER A 18 REMARK 465 PHE A 19 REMARK 465 ASN A 20 REMARK 465 ALA A 21 REMARK 465 SER A 22 REMARK 465 ALA A 23 REMARK 465 MET B 1 REMARK 465 TYR B 2 REMARK 465 MET B 3 REMARK 465 SER B 4 REMARK 465 LYS B 5 REMARK 465 TYR B 6 REMARK 465 VAL B 7 REMARK 465 PRO B 8 REMARK 465 VAL B 9 REMARK 465 TYR B 10 REMARK 465 THR B 11 REMARK 465 LEU B 12 REMARK 465 LEU B 13 REMARK 465 ILE B 14 REMARK 465 LEU B 15 REMARK 465 ILE B 16 REMARK 465 TYR B 17 REMARK 465 SER B 18 REMARK 465 PHE B 19 REMARK 465 ASN B 20 REMARK 465 ALA B 21 REMARK 465 SER B 22 REMARK 465 ALA B 23 REMARK 465 MET C 1 REMARK 465 TYR C 2 REMARK 465 MET C 3 REMARK 465 SER C 4 REMARK 465 LYS C 5 REMARK 465 TYR C 6 REMARK 465 VAL C 7 REMARK 465 PRO C 8 REMARK 465 VAL C 9 REMARK 465 TYR C 10 REMARK 465 THR C 11 REMARK 465 LEU C 12 REMARK 465 LEU C 13 REMARK 465 ILE C 14 REMARK 465 LEU C 15 REMARK 465 ILE C 16 REMARK 465 TYR C 17 REMARK 465 SER C 18 REMARK 465 PHE C 19 REMARK 465 ASN C 20 REMARK 465 ALA C 21 REMARK 465 SER C 22 REMARK 465 ALA C 23 REMARK 465 MET D 1 REMARK 465 TYR D 2 REMARK 465 MET D 3 REMARK 465 SER D 4 REMARK 465 LYS D 5 REMARK 465 TYR D 6 REMARK 465 VAL D 7 REMARK 465 PRO D 8 REMARK 465 VAL D 9 REMARK 465 TYR D 10 REMARK 465 THR D 11 REMARK 465 LEU D 12 REMARK 465 LEU D 13 REMARK 465 ILE D 14 REMARK 465 LEU D 15 REMARK 465 ILE D 16 REMARK 465 TYR D 17 REMARK 465 SER D 18 REMARK 465 PHE D 19 REMARK 465 ASN D 20 REMARK 465 ALA D 21 REMARK 465 SER D 22 REMARK 465 ALA D 23 REMARK 465 LEU D 138 REMARK 465 MET E 1 REMARK 465 TYR E 2 REMARK 465 MET E 3 REMARK 465 SER E 4 REMARK 465 LYS E 5 REMARK 465 TYR E 6 REMARK 465 VAL E 7 REMARK 465 PRO E 8 REMARK 465 VAL E 9 REMARK 465 TYR E 10 REMARK 465 THR E 11 REMARK 465 LEU E 12 REMARK 465 LEU E 13 REMARK 465 ILE E 14 REMARK 465 LEU E 15 REMARK 465 ILE E 16 REMARK 465 TYR E 17 REMARK 465 SER E 18 REMARK 465 PHE E 19 REMARK 465 ASN E 20 REMARK 465 ALA E 21 REMARK 465 SER E 22 REMARK 465 ALA E 23 REMARK 465 LEU E 138 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 138 CG CD1 CD2 REMARK 470 LEU B 138 CG CD1 CD2 REMARK 470 LEU C 138 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH E 310 O HOH E 347 1.97 REMARK 500 O HOH D 341 O HOH D 374 2.02 REMARK 500 OG1 THR E 131 O HOH E 301 2.05 REMARK 500 O HOH B 387 O HOH E 370 2.10 REMARK 500 OD1 ASP C 87 O HOH C 301 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH D 321 O HOH E 347 3544 1.73 REMARK 500 O HOH A 374 O HOH B 335 4555 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 76 166.64 78.66 REMARK 500 PHE A 117 -104.63 -112.55 REMARK 500 CYS A 128 33.43 -141.32 REMARK 500 THR B 49 -1.50 78.19 REMARK 500 SER B 76 164.61 79.63 REMARK 500 PHE B 117 -104.45 -113.31 REMARK 500 SER C 76 163.35 76.67 REMARK 500 PHE C 117 -105.99 -118.14 REMARK 500 SER D 76 162.32 80.04 REMARK 500 PHE D 117 -101.95 -111.60 REMARK 500 SER D 118 -179.25 -172.17 REMARK 500 THR E 49 -1.46 71.25 REMARK 500 SER E 76 162.26 81.73 REMARK 500 PHE E 117 -99.08 -114.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 410 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH B 411 DISTANCE = 6.29 ANGSTROMS DBREF 5WHT A 1 137 UNP Q8Z6A3 Q8Z6A3_SALTI 1 137 DBREF 5WHT B 1 137 UNP Q8Z6A3 Q8Z6A3_SALTI 1 137 DBREF 5WHT C 1 137 UNP Q8Z6A3 Q8Z6A3_SALTI 1 137 DBREF 5WHT D 1 137 UNP Q8Z6A3 Q8Z6A3_SALTI 1 137 DBREF 5WHT E 1 137 UNP Q8Z6A3 Q8Z6A3_SALTI 1 137 SEQADV 5WHT LEU A 138 UNP Q8Z6A3 EXPRESSION TAG SEQADV 5WHT LEU B 138 UNP Q8Z6A3 EXPRESSION TAG SEQADV 5WHT LEU C 138 UNP Q8Z6A3 EXPRESSION TAG SEQADV 5WHT LEU D 138 UNP Q8Z6A3 EXPRESSION TAG SEQADV 5WHT LEU E 138 UNP Q8Z6A3 EXPRESSION TAG SEQRES 1 A 138 MET TYR MET SER LYS TYR VAL PRO VAL TYR THR LEU LEU SEQRES 2 A 138 ILE LEU ILE TYR SER PHE ASN ALA SER ALA GLU TRP THR SEQRES 3 A 138 GLY ASP ASN THR ASN ALA TYR TYR SER ASP GLU VAL ILE SEQRES 4 A 138 SER GLU LEU HIS VAL GLY GLN ILE ASP THR SER PRO TYR SEQRES 5 A 138 PHE CYS ILE LYS THR VAL LYS ALA ASN GLY SER GLY THR SEQRES 6 A 138 PRO VAL VAL ALA CYS ALA VAL SER LYS GLN SER ILE TRP SEQRES 7 A 138 ALA PRO SER PHE LYS GLU LEU LEU ASP GLN ALA ARG TYR SEQRES 8 A 138 PHE TYR SER THR GLY GLN SER VAL ARG ILE HIS VAL GLN SEQRES 9 A 138 LYS ASN ILE TRP THR TYR PRO LEU PHE VAL ASN THR PHE SEQRES 10 A 138 SER ALA ASN ALA LEU VAL GLY LEU SER SER CYS SER ALA SEQRES 11 A 138 THR GLN CYS PHE GLY PRO LYS LEU SEQRES 1 B 138 MET TYR MET SER LYS TYR VAL PRO VAL TYR THR LEU LEU SEQRES 2 B 138 ILE LEU ILE TYR SER PHE ASN ALA SER ALA GLU TRP THR SEQRES 3 B 138 GLY ASP ASN THR ASN ALA TYR TYR SER ASP GLU VAL ILE SEQRES 4 B 138 SER GLU LEU HIS VAL GLY GLN ILE ASP THR SER PRO TYR SEQRES 5 B 138 PHE CYS ILE LYS THR VAL LYS ALA ASN GLY SER GLY THR SEQRES 6 B 138 PRO VAL VAL ALA CYS ALA VAL SER LYS GLN SER ILE TRP SEQRES 7 B 138 ALA PRO SER PHE LYS GLU LEU LEU ASP GLN ALA ARG TYR SEQRES 8 B 138 PHE TYR SER THR GLY GLN SER VAL ARG ILE HIS VAL GLN SEQRES 9 B 138 LYS ASN ILE TRP THR TYR PRO LEU PHE VAL ASN THR PHE SEQRES 10 B 138 SER ALA ASN ALA LEU VAL GLY LEU SER SER CYS SER ALA SEQRES 11 B 138 THR GLN CYS PHE GLY PRO LYS LEU SEQRES 1 C 138 MET TYR MET SER LYS TYR VAL PRO VAL TYR THR LEU LEU SEQRES 2 C 138 ILE LEU ILE TYR SER PHE ASN ALA SER ALA GLU TRP THR SEQRES 3 C 138 GLY ASP ASN THR ASN ALA TYR TYR SER ASP GLU VAL ILE SEQRES 4 C 138 SER GLU LEU HIS VAL GLY GLN ILE ASP THR SER PRO TYR SEQRES 5 C 138 PHE CYS ILE LYS THR VAL LYS ALA ASN GLY SER GLY THR SEQRES 6 C 138 PRO VAL VAL ALA CYS ALA VAL SER LYS GLN SER ILE TRP SEQRES 7 C 138 ALA PRO SER PHE LYS GLU LEU LEU ASP GLN ALA ARG TYR SEQRES 8 C 138 PHE TYR SER THR GLY GLN SER VAL ARG ILE HIS VAL GLN SEQRES 9 C 138 LYS ASN ILE TRP THR TYR PRO LEU PHE VAL ASN THR PHE SEQRES 10 C 138 SER ALA ASN ALA LEU VAL GLY LEU SER SER CYS SER ALA SEQRES 11 C 138 THR GLN CYS PHE GLY PRO LYS LEU SEQRES 1 D 138 MET TYR MET SER LYS TYR VAL PRO VAL TYR THR LEU LEU SEQRES 2 D 138 ILE LEU ILE TYR SER PHE ASN ALA SER ALA GLU TRP THR SEQRES 3 D 138 GLY ASP ASN THR ASN ALA TYR TYR SER ASP GLU VAL ILE SEQRES 4 D 138 SER GLU LEU HIS VAL GLY GLN ILE ASP THR SER PRO TYR SEQRES 5 D 138 PHE CYS ILE LYS THR VAL LYS ALA ASN GLY SER GLY THR SEQRES 6 D 138 PRO VAL VAL ALA CYS ALA VAL SER LYS GLN SER ILE TRP SEQRES 7 D 138 ALA PRO SER PHE LYS GLU LEU LEU ASP GLN ALA ARG TYR SEQRES 8 D 138 PHE TYR SER THR GLY GLN SER VAL ARG ILE HIS VAL GLN SEQRES 9 D 138 LYS ASN ILE TRP THR TYR PRO LEU PHE VAL ASN THR PHE SEQRES 10 D 138 SER ALA ASN ALA LEU VAL GLY LEU SER SER CYS SER ALA SEQRES 11 D 138 THR GLN CYS PHE GLY PRO LYS LEU SEQRES 1 E 138 MET TYR MET SER LYS TYR VAL PRO VAL TYR THR LEU LEU SEQRES 2 E 138 ILE LEU ILE TYR SER PHE ASN ALA SER ALA GLU TRP THR SEQRES 3 E 138 GLY ASP ASN THR ASN ALA TYR TYR SER ASP GLU VAL ILE SEQRES 4 E 138 SER GLU LEU HIS VAL GLY GLN ILE ASP THR SER PRO TYR SEQRES 5 E 138 PHE CYS ILE LYS THR VAL LYS ALA ASN GLY SER GLY THR SEQRES 6 E 138 PRO VAL VAL ALA CYS ALA VAL SER LYS GLN SER ILE TRP SEQRES 7 E 138 ALA PRO SER PHE LYS GLU LEU LEU ASP GLN ALA ARG TYR SEQRES 8 E 138 PHE TYR SER THR GLY GLN SER VAL ARG ILE HIS VAL GLN SEQRES 9 E 138 LYS ASN ILE TRP THR TYR PRO LEU PHE VAL ASN THR PHE SEQRES 10 E 138 SER ALA ASN ALA LEU VAL GLY LEU SER SER CYS SER ALA SEQRES 11 E 138 THR GLN CYS PHE GLY PRO LYS LEU HET GLC F 1 12 HET GAL F 2 11 HET SIA F 3 20 HET GAL G 1 12 HET SIA G 2 20 HET ACT A 204 7 HET SIA B 201 21 HET ACT B 202 7 HET ACT B 203 7 HET ACT B 204 7 HET PEG B 205 17 HET ACT C 203 7 HET SIA D 201 39 HET ACT D 202 7 HET ACT D 203 7 HET PEG D 204 7 HET ACT E 201 7 HET PEG E 202 7 HET PEG E 203 17 HET PEG E 204 7 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM SIA N-ACETYL-ALPHA-NEURAMINIC ACID HETNAM ACT ACETATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN SIA N-ACETYLNEURAMINIC ACID; SIALIC ACID; ALPHA-SIALIC HETSYN 2 SIA ACID; O-SIALIC ACID FORMUL 6 GLC C6 H12 O6 FORMUL 6 GAL 2(C6 H12 O6) FORMUL 6 SIA 4(C11 H19 N O9) FORMUL 8 ACT 8(C2 H3 O2 1-) FORMUL 13 PEG 5(C4 H10 O3) FORMUL 23 HOH *478(H2 O) HELIX 1 AA1 TRP A 78 PRO A 80 5 3 HELIX 2 AA2 SER A 81 GLY A 96 1 16 HELIX 3 AA3 TYR A 110 PHE A 117 1 8 HELIX 4 AA4 TRP B 78 PRO B 80 5 3 HELIX 5 AA5 SER B 81 GLY B 96 1 16 HELIX 6 AA6 TYR B 110 PHE B 117 1 8 HELIX 7 AA7 TRP C 78 PRO C 80 5 3 HELIX 8 AA8 SER C 81 GLY C 96 1 16 HELIX 9 AA9 TYR C 110 PHE C 117 1 8 HELIX 10 AB1 TRP D 78 PRO D 80 5 3 HELIX 11 AB2 SER D 81 GLY D 96 1 16 HELIX 12 AB3 TYR D 110 PHE D 117 1 8 HELIX 13 AB4 TRP E 78 PRO E 80 5 3 HELIX 14 AB5 SER E 81 GLY E 96 1 16 HELIX 15 AB6 TYR E 110 PHE E 117 1 8 SHEET 1 AA118 ALA A 32 ILE A 47 0 SHEET 2 AA118 SER A 50 LYS A 59 -1 O SER A 50 N ILE A 47 SHEET 3 AA118 VAL A 67 VAL A 72 -1 O VAL A 67 N THR A 57 SHEET 4 AA118 ALA A 121 SER A 127 1 O LEU A 122 N CYS A 70 SHEET 5 AA118 ALA C 32 ILE C 47 -1 O VAL C 44 N LEU A 125 SHEET 6 AA118 VAL C 99 GLN C 104 -1 O VAL C 103 N ALA C 32 SHEET 7 AA118 ALA C 121 SER C 127 -1 O SER C 126 N ARG C 100 SHEET 8 AA118 ALA D 32 ILE D 47 -1 O VAL D 44 N LEU C 125 SHEET 9 AA118 VAL D 99 GLN D 104 -1 O VAL D 103 N ALA D 32 SHEET 10 AA118 ALA D 121 SER D 127 -1 O SER D 126 N ARG D 100 SHEET 11 AA118 ALA E 32 ILE E 47 -1 O VAL E 44 N LEU D 125 SHEET 12 AA118 VAL E 99 GLN E 104 -1 O VAL E 103 N ALA E 32 SHEET 13 AA118 ALA E 121 SER E 127 -1 O SER E 126 N ARG E 100 SHEET 14 AA118 ALA B 32 ILE B 47 -1 N VAL B 44 O LEU E 125 SHEET 15 AA118 VAL B 99 GLN B 104 -1 O VAL B 99 N GLU B 37 SHEET 16 AA118 ALA B 121 SER B 127 -1 O VAL B 123 N HIS B 102 SHEET 17 AA118 VAL B 67 VAL B 72 1 N CYS B 70 O LEU B 122 SHEET 18 AA118 SER B 50 LYS B 59 -1 N THR B 57 O VAL B 67 SHEET 1 AA2 4 ALA E 121 SER E 127 0 SHEET 2 AA2 4 VAL E 67 VAL E 72 1 N CYS E 70 O LEU E 122 SHEET 3 AA2 4 SER E 50 LYS E 59 -1 N THR E 57 O VAL E 67 SHEET 4 AA2 4 ALA E 32 ILE E 47 -1 N VAL E 38 O VAL E 58 SHEET 1 AA3 4 ALA D 121 SER D 127 0 SHEET 2 AA3 4 VAL D 67 VAL D 72 1 N CYS D 70 O LEU D 122 SHEET 3 AA3 4 SER D 50 LYS D 59 -1 N ILE D 55 O ALA D 69 SHEET 4 AA3 4 ALA D 32 ILE D 47 -1 N VAL D 38 O VAL D 58 SHEET 1 AA4 4 ALA C 121 SER C 127 0 SHEET 2 AA4 4 VAL C 67 VAL C 72 1 N CYS C 70 O LEU C 122 SHEET 3 AA4 4 SER C 50 LYS C 59 -1 N THR C 57 O VAL C 67 SHEET 4 AA4 4 ALA C 32 ILE C 47 -1 N SER C 40 O LYS C 56 SHEET 1 AA5 4 ALA A 121 SER A 127 0 SHEET 2 AA5 4 VAL A 99 GLN A 104 -1 N ARG A 100 O SER A 126 SHEET 3 AA5 4 ALA A 32 ILE A 47 -1 N ALA A 32 O VAL A 103 SHEET 4 AA5 4 ALA B 121 SER B 127 -1 O LEU B 125 N VAL A 44 SSBOND 1 CYS A 54 CYS A 70 1555 1555 2.03 SSBOND 2 CYS A 128 CYS A 133 1555 1555 2.02 SSBOND 3 CYS B 54 CYS B 70 1555 1555 2.05 SSBOND 4 CYS B 128 CYS B 133 1555 1555 2.04 SSBOND 5 CYS C 54 CYS C 70 1555 1555 2.06 SSBOND 6 CYS C 128 CYS C 133 1555 1555 2.03 SSBOND 7 CYS D 54 CYS D 70 1555 1555 2.05 SSBOND 8 CYS D 128 CYS D 133 1555 1555 2.04 SSBOND 9 CYS E 54 CYS E 70 1555 1555 2.06 SSBOND 10 CYS E 128 CYS E 133 1555 1555 2.04 LINK O4 GLC F 1 C1 GAL F 2 1555 1555 1.45 LINK O3 GAL F 2 C2 SIA F 3 1555 1555 1.44 LINK O3 GAL G 1 C2 SIA G 2 1555 1555 1.44 CRYST1 60.379 95.682 117.173 90.00 90.00 90.00 P 21 21 21 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016562 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010451 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008534 0.00000