HEADER HYDROLASE 19-JUL-17 5WIG TITLE STRUCTURE OF NEW DELHI METALLO-BETA-LACTAMASE 4 (NDM-4) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NDM-4; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 573; SOURCE 4 GENE: BLANDM-4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS LACTAMASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.VANPELT,C.WILLIAMS,R.C.PAGE REVDAT 4 04-OCT-23 5WIG 1 LINK REVDAT 3 01-JAN-20 5WIG 1 REMARK REVDAT 2 01-MAY-19 5WIG 1 JRNL REVDAT 1 18-OCT-17 5WIG 0 JRNL AUTH A.C.STEWART,C.R.BETHEL,J.VANPELT,A.BERGSTROM,Z.CHENG, JRNL AUTH 2 C.G.MILLER,C.WILLIAMS,R.POTH,M.MORRIS,O.LAHEY,J.C.NIX, JRNL AUTH 3 D.L.TIERNEY,R.C.PAGE,M.W.CROWDER,R.A.BONOMO,W.FAST JRNL TITL CLINICAL VARIANTS OF NEW DELHI METALLO-BETA-LACTAMASE ARE JRNL TITL 2 EVOLVING TO OVERCOME ZINC SCARCITY. JRNL REF ACS INFECT DIS. V. 3 927 2017 JRNL REFN ESSN 2373-8227 JRNL PMID 28965402 JRNL DOI 10.1021/ACSINFECDIS.7B00128 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 79231 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.510 REMARK 3 FREE R VALUE TEST SET COUNT : 3826 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.1921 - 4.1984 0.90 5079 128 0.1452 0.1761 REMARK 3 2 4.1984 - 3.3329 0.94 5319 138 0.1486 0.1459 REMARK 3 3 3.3329 - 2.9118 0.95 5362 143 0.1565 0.1976 REMARK 3 4 2.9118 - 2.6456 0.96 5437 142 0.1622 0.1895 REMARK 3 5 2.6456 - 2.4560 0.97 5424 138 0.1698 0.1921 REMARK 3 6 2.4560 - 2.3112 0.97 5453 141 0.1673 0.2042 REMARK 3 7 2.3112 - 2.1955 0.97 5468 144 0.1862 0.2108 REMARK 3 8 2.1955 - 2.0999 0.98 5569 142 0.1769 0.2523 REMARK 3 9 2.0999 - 2.0191 0.98 5484 141 0.1787 0.2287 REMARK 3 10 2.0191 - 1.9494 0.98 5558 146 0.1851 0.2062 REMARK 3 11 1.9494 - 1.8885 0.99 5550 140 0.2018 0.2195 REMARK 3 12 1.8885 - 1.8345 0.99 5591 143 0.2032 0.2282 REMARK 3 13 1.8345 - 1.7862 0.99 5578 146 0.2080 0.2439 REMARK 3 14 1.7862 - 1.7426 0.99 5626 141 0.2203 0.2333 REMARK 3 15 1.7426 - 1.7030 0.99 5623 147 0.2318 0.2602 REMARK 3 16 1.7030 - 1.6668 0.98 5516 140 0.2516 0.2685 REMARK 3 17 1.6668 - 1.6334 0.99 5532 140 0.2611 0.3002 REMARK 3 18 1.6334 - 1.6026 0.99 5564 144 0.2703 0.2954 REMARK 3 19 1.6026 - 1.5740 0.99 5606 148 0.2896 0.2960 REMARK 3 20 1.5740 - 1.5473 0.99 5516 142 0.2939 0.3078 REMARK 3 21 1.5473 - 1.5223 0.98 5566 141 0.3159 0.3098 REMARK 3 22 1.5223 - 1.4989 0.99 5556 142 0.3284 0.3622 REMARK 3 23 1.4989 - 1.4769 0.98 5432 143 0.3362 0.2732 REMARK 3 24 1.4769 - 1.4561 0.98 5616 142 0.3554 0.3924 REMARK 3 25 1.4561 - 1.4364 0.98 5478 142 0.3629 0.4179 REMARK 3 26 1.4364 - 1.4177 0.96 5454 142 0.3793 0.3853 REMARK 3 27 1.4177 - 1.4000 0.96 5475 140 0.3823 0.4088 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3542 REMARK 3 ANGLE : 1.473 4842 REMARK 3 CHIRALITY : 0.099 539 REMARK 3 PLANARITY : 0.008 647 REMARK 3 DIHEDRAL : 13.275 1244 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 42 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.9082 36.5808 86.1304 REMARK 3 T TENSOR REMARK 3 T11: 0.1437 T22: 0.1273 REMARK 3 T33: 0.1879 T12: -0.0171 REMARK 3 T13: 0.0372 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 2.9176 L22: 5.6233 REMARK 3 L33: 7.2611 L12: 1.7224 REMARK 3 L13: 1.4437 L23: 5.3664 REMARK 3 S TENSOR REMARK 3 S11: 0.0045 S12: -0.0918 S13: 0.1137 REMARK 3 S21: 0.1428 S22: -0.0224 S23: 0.4862 REMARK 3 S31: 0.1116 S32: -0.1954 S33: 0.0564 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 58 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6216 28.6527 87.2206 REMARK 3 T TENSOR REMARK 3 T11: 0.1223 T22: 0.1178 REMARK 3 T33: 0.1661 T12: -0.0191 REMARK 3 T13: 0.0188 T23: 0.0264 REMARK 3 L TENSOR REMARK 3 L11: 2.5080 L22: 5.0563 REMARK 3 L33: 3.9083 L12: -0.2521 REMARK 3 L13: 0.3935 L23: 0.4492 REMARK 3 S TENSOR REMARK 3 S11: -0.0364 S12: -0.2317 S13: -0.4361 REMARK 3 S21: 0.2554 S22: -0.0281 S23: -0.0615 REMARK 3 S31: 0.3891 S32: 0.1445 S33: -0.0186 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5823 40.5456 81.2176 REMARK 3 T TENSOR REMARK 3 T11: 0.0811 T22: 0.0840 REMARK 3 T33: 0.0853 T12: 0.0005 REMARK 3 T13: 0.0098 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.7841 L22: 5.2547 REMARK 3 L33: 1.4991 L12: -1.2159 REMARK 3 L13: 0.3452 L23: -0.5193 REMARK 3 S TENSOR REMARK 3 S11: 0.0475 S12: 0.0799 S13: 0.0345 REMARK 3 S21: -0.1355 S22: -0.0616 S23: 0.1254 REMARK 3 S31: -0.0303 S32: -0.1246 S33: 0.0039 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9778 42.5465 86.7576 REMARK 3 T TENSOR REMARK 3 T11: 0.1200 T22: 0.0944 REMARK 3 T33: 0.1881 T12: -0.0080 REMARK 3 T13: -0.0253 T23: 0.0193 REMARK 3 L TENSOR REMARK 3 L11: 1.1929 L22: 2.1243 REMARK 3 L33: 1.2725 L12: 0.0412 REMARK 3 L13: -0.0775 L23: 0.3375 REMARK 3 S TENSOR REMARK 3 S11: 0.0664 S12: -0.0633 S13: 0.0078 REMARK 3 S21: 0.1689 S22: -0.0292 S23: -0.4722 REMARK 3 S31: 0.0283 S32: 0.0565 S33: -0.0391 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 195 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9875 35.5487 98.7436 REMARK 3 T TENSOR REMARK 3 T11: 0.3887 T22: 0.1800 REMARK 3 T33: 0.1426 T12: -0.0398 REMARK 3 T13: -0.0803 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 2.3450 L22: 4.3280 REMARK 3 L33: 1.4686 L12: -1.2377 REMARK 3 L13: 0.2359 L23: -1.7244 REMARK 3 S TENSOR REMARK 3 S11: 0.0998 S12: -0.3185 S13: -0.0784 REMARK 3 S21: 0.5279 S22: -0.0019 S23: -0.2418 REMARK 3 S31: 0.2019 S32: -0.0524 S33: -0.0929 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 229 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3161 36.6680 104.1028 REMARK 3 T TENSOR REMARK 3 T11: 0.5443 T22: 0.2463 REMARK 3 T33: 0.1609 T12: -0.0590 REMARK 3 T13: -0.0721 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 0.5205 L22: 0.7685 REMARK 3 L33: 0.1482 L12: 0.6328 REMARK 3 L13: 0.2779 L23: 0.3376 REMARK 3 S TENSOR REMARK 3 S11: 0.1500 S12: -0.3432 S13: -0.1552 REMARK 3 S21: 0.6745 S22: -0.0788 S23: -0.1992 REMARK 3 S31: 0.2641 S32: 0.0023 S33: -0.0417 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 42 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.2297 35.8685 128.0265 REMARK 3 T TENSOR REMARK 3 T11: 0.0872 T22: 0.1855 REMARK 3 T33: 0.2604 T12: -0.0168 REMARK 3 T13: 0.0167 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 0.5056 L22: 4.7421 REMARK 3 L33: 2.2427 L12: 1.4165 REMARK 3 L13: 0.9257 L23: 2.2636 REMARK 3 S TENSOR REMARK 3 S11: -0.0043 S12: -0.0961 S13: 0.0977 REMARK 3 S21: 0.0737 S22: -0.0515 S23: 0.5446 REMARK 3 S31: 0.0542 S32: -0.2669 S33: 0.0642 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1425 26.6739 129.1249 REMARK 3 T TENSOR REMARK 3 T11: 0.1215 T22: 0.1570 REMARK 3 T33: 0.2473 T12: -0.0182 REMARK 3 T13: 0.0250 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 5.2665 L22: 2.8094 REMARK 3 L33: 1.6331 L12: -3.8085 REMARK 3 L13: -1.8236 L23: 1.3294 REMARK 3 S TENSOR REMARK 3 S11: -0.2064 S12: -0.2134 S13: -0.5467 REMARK 3 S21: 0.2487 S22: 0.0181 S23: 0.3123 REMARK 3 S31: 0.2866 S32: 0.0563 S33: 0.1605 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 71 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.9998 39.9601 123.0735 REMARK 3 T TENSOR REMARK 3 T11: 0.0591 T22: 0.1044 REMARK 3 T33: 0.1306 T12: -0.0038 REMARK 3 T13: 0.0062 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 1.3495 L22: 1.4036 REMARK 3 L33: 0.6770 L12: -0.1555 REMARK 3 L13: 0.1652 L23: -0.0487 REMARK 3 S TENSOR REMARK 3 S11: -0.0171 S12: 0.0364 S13: -0.0558 REMARK 3 S21: -0.0002 S22: -0.0144 S23: 0.2689 REMARK 3 S31: 0.0251 S32: -0.1163 S33: 0.0188 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 119 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5080 41.7144 128.3605 REMARK 3 T TENSOR REMARK 3 T11: 0.0387 T22: 0.1009 REMARK 3 T33: 0.0868 T12: -0.0097 REMARK 3 T13: 0.0111 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.6305 L22: 2.3208 REMARK 3 L33: 1.9027 L12: 0.0887 REMARK 3 L13: 0.2606 L23: 0.4527 REMARK 3 S TENSOR REMARK 3 S11: -0.0000 S12: -0.0202 S13: -0.0363 REMARK 3 S21: 0.0178 S22: -0.0113 S23: -0.1205 REMARK 3 S31: 0.0887 S32: 0.0155 S33: 0.0104 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 195 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1448 35.0288 140.2033 REMARK 3 T TENSOR REMARK 3 T11: 0.1598 T22: 0.1618 REMARK 3 T33: 0.0820 T12: -0.0299 REMARK 3 T13: 0.0252 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 2.3423 L22: 3.5417 REMARK 3 L33: 2.3289 L12: -0.8395 REMARK 3 L13: 0.6829 L23: -1.4673 REMARK 3 S TENSOR REMARK 3 S11: -0.0497 S12: -0.1585 S13: -0.1472 REMARK 3 S21: 0.2008 S22: 0.1000 S23: 0.1880 REMARK 3 S31: 0.2340 S32: -0.1296 S33: -0.0306 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 229 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3871 35.7130 145.5169 REMARK 3 T TENSOR REMARK 3 T11: 0.1533 T22: 0.1380 REMARK 3 T33: 0.0880 T12: -0.0079 REMARK 3 T13: 0.0517 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 3.2504 L22: 1.7384 REMARK 3 L33: 4.0027 L12: 0.8895 REMARK 3 L13: 0.4439 L23: -0.0469 REMARK 3 S TENSOR REMARK 3 S11: 0.0492 S12: -0.1739 S13: -0.0928 REMARK 3 S21: 0.3066 S22: -0.0052 S23: 0.1791 REMARK 3 S31: 0.0982 S32: -0.1383 S33: -0.0416 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WIG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1000229084. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79231 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 39.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4TYF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, 20% POLYETHYLENE GLYCOL REMARK 280 MONOMETHYL ETHER 550, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.57700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 41 REMARK 465 MET B 41 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 242 CG CD CE NZ REMARK 470 LEU A 269 CG CD1 CD2 REMARK 470 LYS B 214 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 439 O HOH B 619 1.91 REMARK 500 O HOH A 636 O HOH A 656 1.98 REMARK 500 O HOH B 492 O HOH B 616 2.00 REMARK 500 O HOH A 535 O HOH A 606 2.01 REMARK 500 O HOH A 640 O HOH A 656 2.03 REMARK 500 OG SER B 191 O HOH B 401 2.08 REMARK 500 NZ LYS A 268 O HOH A 401 2.11 REMARK 500 O HOH A 584 O HOH A 603 2.16 REMARK 500 OG SER A 191 O HOH A 402 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 441 O HOH A 551 2647 2.09 REMARK 500 O HOH A 547 O HOH B 406 2658 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 90 144.01 75.67 REMARK 500 HIS A 120 170.21 172.68 REMARK 500 ASP B 90 142.08 77.29 REMARK 500 HIS B 120 169.22 172.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 120 NE2 REMARK 620 2 HIS A 122 ND1 106.5 REMARK 620 3 HIS A 189 NE2 112.1 110.1 REMARK 620 4 HOH A 420 O 117.8 99.3 110.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 124 OD2 REMARK 620 2 CYS A 208 SG 100.6 REMARK 620 3 HIS A 250 NE2 82.8 118.8 REMARK 620 4 HOH A 420 O 78.5 109.0 130.9 REMARK 620 5 HOH A 606 O 153.2 104.8 92.4 85.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 120 NE2 REMARK 620 2 HIS B 122 ND1 107.8 REMARK 620 3 HIS B 189 NE2 105.7 107.1 REMARK 620 4 HOH B 439 O 123.8 97.2 113.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 124 OD2 REMARK 620 2 CYS B 208 SG 89.6 REMARK 620 3 HIS B 250 NE2 84.2 106.8 REMARK 620 4 HOH B 439 O 92.8 116.1 137.0 REMARK 620 5 HOH B 616 O 158.3 112.0 87.2 80.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 302 DBREF1 5WIG A 42 270 UNP A0A0G2ST15_KLEPN DBREF2 5WIG A A0A0G2ST15 42 270 DBREF1 5WIG B 42 270 UNP A0A0G2ST15_KLEPN DBREF2 5WIG B A0A0G2ST15 42 270 SEQADV 5WIG MET A 41 UNP A0A0G2ST1 INITIATING METHIONINE SEQADV 5WIG MET B 41 UNP A0A0G2ST1 INITIATING METHIONINE SEQRES 1 A 230 MET GLY ASP GLN ARG PHE GLY ASP LEU VAL PHE ARG GLN SEQRES 2 A 230 LEU ALA PRO ASN VAL TRP GLN HIS THR SER TYR LEU ASP SEQRES 3 A 230 MET PRO GLY PHE GLY ALA VAL ALA SER ASN GLY LEU ILE SEQRES 4 A 230 VAL ARG ASP GLY GLY ARG VAL LEU VAL VAL ASP THR ALA SEQRES 5 A 230 TRP THR ASP ASP GLN THR ALA GLN ILE LEU ASN TRP ILE SEQRES 6 A 230 LYS GLN GLU ILE ASN LEU PRO VAL ALA LEU ALA VAL VAL SEQRES 7 A 230 THR HIS ALA HIS GLN ASP LYS MET GLY GLY MET ASP ALA SEQRES 8 A 230 LEU HIS ALA ALA GLY ILE ALA THR TYR ALA ASN ALA LEU SEQRES 9 A 230 SER ASN GLN LEU ALA PRO GLN GLU GLY LEU VAL ALA ALA SEQRES 10 A 230 GLN HIS SER LEU THR PHE ALA ALA ASN GLY TRP VAL GLU SEQRES 11 A 230 PRO ALA THR ALA PRO ASN PHE GLY PRO LEU LYS VAL PHE SEQRES 12 A 230 TYR PRO GLY PRO GLY HIS THR SER ASP ASN ILE THR VAL SEQRES 13 A 230 GLY ILE ASP GLY THR ASP ILE ALA PHE GLY GLY CYS LEU SEQRES 14 A 230 ILE LYS ASP SER LYS ALA LYS SER LEU GLY ASN LEU GLY SEQRES 15 A 230 ASP ALA ASP THR GLU HIS TYR ALA ALA SER ALA ARG ALA SEQRES 16 A 230 PHE GLY ALA ALA PHE PRO LYS ALA SER MET ILE VAL MET SEQRES 17 A 230 SER HIS SER ALA PRO ASP SER ARG ALA ALA ILE THR HIS SEQRES 18 A 230 THR ALA ARG MET ALA ASP LYS LEU ARG SEQRES 1 B 230 MET GLY ASP GLN ARG PHE GLY ASP LEU VAL PHE ARG GLN SEQRES 2 B 230 LEU ALA PRO ASN VAL TRP GLN HIS THR SER TYR LEU ASP SEQRES 3 B 230 MET PRO GLY PHE GLY ALA VAL ALA SER ASN GLY LEU ILE SEQRES 4 B 230 VAL ARG ASP GLY GLY ARG VAL LEU VAL VAL ASP THR ALA SEQRES 5 B 230 TRP THR ASP ASP GLN THR ALA GLN ILE LEU ASN TRP ILE SEQRES 6 B 230 LYS GLN GLU ILE ASN LEU PRO VAL ALA LEU ALA VAL VAL SEQRES 7 B 230 THR HIS ALA HIS GLN ASP LYS MET GLY GLY MET ASP ALA SEQRES 8 B 230 LEU HIS ALA ALA GLY ILE ALA THR TYR ALA ASN ALA LEU SEQRES 9 B 230 SER ASN GLN LEU ALA PRO GLN GLU GLY LEU VAL ALA ALA SEQRES 10 B 230 GLN HIS SER LEU THR PHE ALA ALA ASN GLY TRP VAL GLU SEQRES 11 B 230 PRO ALA THR ALA PRO ASN PHE GLY PRO LEU LYS VAL PHE SEQRES 12 B 230 TYR PRO GLY PRO GLY HIS THR SER ASP ASN ILE THR VAL SEQRES 13 B 230 GLY ILE ASP GLY THR ASP ILE ALA PHE GLY GLY CYS LEU SEQRES 14 B 230 ILE LYS ASP SER LYS ALA LYS SER LEU GLY ASN LEU GLY SEQRES 15 B 230 ASP ALA ASP THR GLU HIS TYR ALA ALA SER ALA ARG ALA SEQRES 16 B 230 PHE GLY ALA ALA PHE PRO LYS ALA SER MET ILE VAL MET SEQRES 17 B 230 SER HIS SER ALA PRO ASP SER ARG ALA ALA ILE THR HIS SEQRES 18 B 230 THR ALA ARG MET ALA ASP LYS LEU ARG HET ZN A 301 1 HET ZN A 302 1 HET ZN B 301 1 HET ZN B 302 1 HETNAM ZN ZINC ION FORMUL 3 ZN 4(ZN 2+) FORMUL 7 HOH *607(H2 O) HELIX 1 AA1 THR A 94 ILE A 109 1 16 HELIX 2 AA2 HIS A 122 GLY A 127 1 6 HELIX 3 AA3 GLY A 128 ALA A 135 1 8 HELIX 4 AA4 ALA A 143 ALA A 149 1 7 HELIX 5 AA5 PRO A 150 GLY A 153 5 4 HELIX 6 AA6 GLU A 170 ALA A 174 5 5 HELIX 7 AA7 GLY A 207 ILE A 210 5 4 HELIX 8 AA8 HIS A 228 PHE A 240 1 13 HELIX 9 AA9 ARG A 256 LYS A 268 1 13 HELIX 10 AB1 THR B 94 ILE B 109 1 16 HELIX 11 AB2 HIS B 122 GLY B 127 1 6 HELIX 12 AB3 GLY B 128 ALA B 135 1 8 HELIX 13 AB4 ALA B 143 ALA B 149 1 7 HELIX 14 AB5 GLU B 170 ALA B 174 5 5 HELIX 15 AB6 CYS B 208 ILE B 210 5 3 HELIX 16 AB7 HIS B 228 PHE B 240 1 13 HELIX 17 AB8 ARG B 256 LYS B 268 1 13 SHEET 1 AA1 8 ASP A 43 PHE A 46 0 SHEET 2 AA1 8 LEU A 49 ALA A 55 -1 O PHE A 51 N GLN A 44 SHEET 3 AA1 8 VAL A 58 MET A 67 -1 O GLN A 60 N ARG A 52 SHEET 4 AA1 8 GLY A 71 ASP A 82 -1 O ILE A 79 N TRP A 59 SHEET 5 AA1 8 ARG A 85 VAL A 89 -1 O ARG A 85 N ASP A 82 SHEET 6 AA1 8 VAL A 113 VAL A 117 1 O VAL A 117 N VAL A 88 SHEET 7 AA1 8 ALA A 138 ASN A 142 1 O TYR A 140 N ALA A 116 SHEET 8 AA1 8 HIS A 159 LEU A 161 1 O LEU A 161 N ALA A 141 SHEET 1 AA2 4 LEU A 180 PHE A 183 0 SHEET 2 AA2 4 THR A 195 ILE A 198 -1 O GLY A 197 N LYS A 181 SHEET 3 AA2 4 ILE A 203 PHE A 205 -1 O PHE A 205 N VAL A 196 SHEET 4 AA2 4 MET A 245 VAL A 247 1 O VAL A 247 N ALA A 204 SHEET 1 AA3 8 ASP B 43 PHE B 46 0 SHEET 2 AA3 8 LEU B 49 ALA B 55 -1 O PHE B 51 N GLN B 44 SHEET 3 AA3 8 VAL B 58 MET B 67 -1 O GLN B 60 N ARG B 52 SHEET 4 AA3 8 GLY B 71 ASP B 82 -1 O VAL B 73 N LEU B 65 SHEET 5 AA3 8 ARG B 85 VAL B 89 -1 O LEU B 87 N VAL B 80 SHEET 6 AA3 8 VAL B 113 VAL B 117 1 O VAL B 117 N VAL B 88 SHEET 7 AA3 8 ALA B 138 ASN B 142 1 O TYR B 140 N ALA B 116 SHEET 8 AA3 8 HIS B 159 LEU B 161 1 O LEU B 161 N ALA B 141 SHEET 1 AA4 4 LEU B 180 PHE B 183 0 SHEET 2 AA4 4 THR B 195 ILE B 198 -1 O GLY B 197 N LYS B 181 SHEET 3 AA4 4 ILE B 203 GLY B 207 -1 O PHE B 205 N VAL B 196 SHEET 4 AA4 4 MET B 245 MET B 248 1 O VAL B 247 N GLY B 206 LINK NE2 HIS A 120 ZN ZN A 301 1555 1555 2.40 LINK ND1 HIS A 122 ZN ZN A 301 1555 1555 2.36 LINK OD2 ASP A 124 ZN ZN A 302 1555 1555 2.38 LINK NE2 HIS A 189 ZN ZN A 301 1555 1555 2.30 LINK SG CYS A 208 ZN ZN A 302 1555 1555 2.46 LINK NE2 HIS A 250 ZN ZN A 302 1555 1555 2.30 LINK ZN ZN A 301 O HOH A 420 1555 1555 2.34 LINK ZN ZN A 302 O HOH A 420 1555 1555 2.40 LINK ZN ZN A 302 O HOH A 606 1555 1555 2.42 LINK NE2 HIS B 120 ZN ZN B 301 1555 1555 2.40 LINK ND1 HIS B 122 ZN ZN B 301 1555 1555 2.39 LINK OD2 ASP B 124 ZN ZN B 302 1555 1555 2.31 LINK NE2 HIS B 189 ZN ZN B 301 1555 1555 2.33 LINK SG CYS B 208 ZN ZN B 302 1555 1555 2.45 LINK NE2 HIS B 250 ZN ZN B 302 1555 1555 2.35 LINK ZN ZN B 301 O HOH B 439 1555 1555 2.30 LINK ZN ZN B 302 O HOH B 439 1555 1555 2.30 LINK ZN ZN B 302 O HOH B 616 1555 1555 2.41 SITE 1 AC1 4 HIS A 120 HIS A 122 HIS A 189 HOH A 420 SITE 1 AC2 5 ASP A 124 CYS A 208 HIS A 250 HOH A 420 SITE 2 AC2 5 HOH A 606 SITE 1 AC3 5 HIS B 120 HIS B 122 HIS B 189 ZN B 302 SITE 2 AC3 5 HOH B 439 SITE 1 AC4 6 ASP B 124 CYS B 208 HIS B 250 ZN B 301 SITE 2 AC4 6 HOH B 439 HOH B 616 CRYST1 41.414 59.154 84.500 90.00 98.70 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024146 0.000000 0.003696 0.00000 SCALE2 0.000000 0.016905 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011972 0.00000