HEADER IMMUNE SYSTEM 20-JUL-17 5WIW TITLE CRYSTAL STRUCTURE OF MURINE 4-1BB N128A MUTANT FROM HEK293T CELLS IN TITLE 2 P43 SPACE GROUP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 9; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 4-1BB LIGAND RECEPTOR,T-CELL ANTIGEN 4-1BB; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: TNFRSF9, CD137, ILA, LY63; SOURCE 6 EXPRESSION_SYSTEM: MAMMALIAN EXPRESSION VECTOR PCDNA3-N-HA-LIC; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1758149 KEYWDS TUMOR NECROSIS FACTOR, APOPTOSIS, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR D.M.ZAJONC,A.BITRA REVDAT 4 04-OCT-23 5WIW 1 HETSYN LINK REVDAT 3 29-JUL-20 5WIW 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 25-APR-18 5WIW 1 JRNL REVDAT 1 20-DEC-17 5WIW 0 JRNL AUTH A.BITRA,T.DOUKOV,J.WANG,G.PICARDA,C.A.BENEDICT,M.CROFT, JRNL AUTH 2 D.M.ZAJONC JRNL TITL CRYSTAL STRUCTURE OF MURINE 4-1BB AND ITS INTERACTION WITH JRNL TITL 2 4-1BBL SUPPORT A ROLE FOR GALECTIN-9 IN 4-1BB SIGNALING. JRNL REF J. BIOL. CHEM. V. 293 1317 2018 JRNL REFN ESSN 1083-351X JRNL PMID 29242193 JRNL DOI 10.1074/JBC.M117.814905 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 15201 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 800 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1087 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.1150 REMARK 3 BIN FREE R VALUE SET COUNT : 71 REMARK 3 BIN FREE R VALUE : 0.1860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1577 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 101 REMARK 3 SOLVENT ATOMS : 115 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.218 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.183 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.277 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1724 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1483 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2347 ; 1.100 ; 2.015 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3454 ; 0.820 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 212 ; 5.837 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 63 ;26.076 ;23.651 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 248 ;12.033 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;11.953 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 276 ; 0.061 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1865 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 363 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5WIW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1000229118. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 - 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN-COOLED DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR, NON FIXED REMARK 200 EXIT SLIT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18619 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.180 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 5WJF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE PH 4.5, 30% W/V REMARK 280 PEG 8000, 0.2M LITHIUM SULFATE, PH 7.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.09200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.63800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.54600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 22 REMARK 465 GLU A 23 REMARK 465 VAL A 24 REMARK 465 GLN A 25 REMARK 465 ASN A 26 REMARK 465 SER A 27 REMARK 465 CYS A 28 REMARK 465 ASP A 29 REMARK 465 ASN A 30 REMARK 465 CYS A 31 REMARK 465 GLN A 32 REMARK 465 PRO A 33 REMARK 465 GLY A 34 REMARK 465 THR A 35 REMARK 465 PHE A 36 REMARK 465 CYS A 37 REMARK 465 ARG A 38 REMARK 465 LYS A 39 REMARK 465 TYR A 40 REMARK 465 ASN A 41 REMARK 465 PRO A 42 REMARK 465 VAL A 43 REMARK 465 CYS A 44 REMARK 465 LYS A 45 REMARK 465 SER A 46 REMARK 465 SER A 53 REMARK 465 SER A 54 REMARK 465 ILE A 55 REMARK 465 GLY A 56 REMARK 465 GLY A 57 REMARK 465 GLN A 58 REMARK 465 PRO A 59 REMARK 465 PRO A 163 REMARK 465 ARG A 164 REMARK 465 LEU B 22 REMARK 465 GLU B 23 REMARK 465 VAL B 24 REMARK 465 GLN B 25 REMARK 465 ASN B 26 REMARK 465 SER B 27 REMARK 465 CYS B 28 REMARK 465 ASP B 29 REMARK 465 ASN B 30 REMARK 465 CYS B 31 REMARK 465 GLN B 32 REMARK 465 PRO B 33 REMARK 465 GLY B 34 REMARK 465 THR B 35 REMARK 465 PHE B 36 REMARK 465 CYS B 37 REMARK 465 ARG B 38 REMARK 465 LYS B 39 REMARK 465 TYR B 40 REMARK 465 ASN B 41 REMARK 465 PRO B 42 REMARK 465 VAL B 43 REMARK 465 CYS B 44 REMARK 465 LYS B 45 REMARK 465 SER B 46 REMARK 465 SER B 53 REMARK 465 SER B 54 REMARK 465 ILE B 55 REMARK 465 GLY B 56 REMARK 465 GLY B 57 REMARK 465 GLN B 58 REMARK 465 PRO B 59 REMARK 465 ASN B 60 REMARK 465 VAL B 162 REMARK 465 PRO B 163 REMARK 465 ARG B 164 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 75 CG CD CE NZ REMARK 470 GLN A 97 CG CD OE1 NE2 REMARK 470 LYS A 113 CG CD CE NZ REMARK 470 GLN A 114 CG CD OE1 NE2 REMARK 470 ARG A 134 CG CD NE CZ NH1 NH2 REMARK 470 PRO B 49 CG CD REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 GLN B 97 CG CD OE1 NE2 REMARK 470 LYS B 113 CG CD CE NZ REMARK 470 GLN B 114 CG CD OE1 NE2 REMARK 470 ARG B 134 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 62 -133.15 -127.91 REMARK 500 GLN A 114 38.17 -99.27 REMARK 500 THR B 51 70.79 -107.65 REMARK 500 ASN B 62 -159.93 -124.86 REMARK 500 GLN B 114 38.27 -98.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 357 DISTANCE = 13.88 ANGSTROMS DBREF 5WIW A 24 160 UNP P20334 TNR9_MOUSE 24 160 DBREF 5WIW B 24 160 UNP P20334 TNR9_MOUSE 24 160 SEQADV 5WIW LEU A 22 UNP P20334 EXPRESSION TAG SEQADV 5WIW GLU A 23 UNP P20334 EXPRESSION TAG SEQADV 5WIW ALA A 128 UNP P20334 ASN 128 ENGINEERED MUTATION SEQADV 5WIW LEU A 161 UNP P20334 EXPRESSION TAG SEQADV 5WIW VAL A 162 UNP P20334 EXPRESSION TAG SEQADV 5WIW PRO A 163 UNP P20334 EXPRESSION TAG SEQADV 5WIW ARG A 164 UNP P20334 EXPRESSION TAG SEQADV 5WIW LEU B 22 UNP P20334 EXPRESSION TAG SEQADV 5WIW GLU B 23 UNP P20334 EXPRESSION TAG SEQADV 5WIW ALA B 128 UNP P20334 ASN 128 ENGINEERED MUTATION SEQADV 5WIW LEU B 161 UNP P20334 EXPRESSION TAG SEQADV 5WIW VAL B 162 UNP P20334 EXPRESSION TAG SEQADV 5WIW PRO B 163 UNP P20334 EXPRESSION TAG SEQADV 5WIW ARG B 164 UNP P20334 EXPRESSION TAG SEQRES 1 A 143 LEU GLU VAL GLN ASN SER CYS ASP ASN CYS GLN PRO GLY SEQRES 2 A 143 THR PHE CYS ARG LYS TYR ASN PRO VAL CYS LYS SER CYS SEQRES 3 A 143 PRO PRO SER THR PHE SER SER ILE GLY GLY GLN PRO ASN SEQRES 4 A 143 CYS ASN ILE CYS ARG VAL CYS ALA GLY TYR PHE ARG PHE SEQRES 5 A 143 LYS LYS PHE CYS SER SER THR HIS ASN ALA GLU CYS GLU SEQRES 6 A 143 CYS ILE GLU GLY PHE HIS CYS LEU GLY PRO GLN CYS THR SEQRES 7 A 143 ARG CYS GLU LYS ASP CYS ARG PRO GLY GLN GLU LEU THR SEQRES 8 A 143 LYS GLN GLY CYS LYS THR CYS SER LEU GLY THR PHE ASN SEQRES 9 A 143 ASP GLN ALA GLY THR GLY VAL CYS ARG PRO TRP THR ASN SEQRES 10 A 143 CYS SER LEU ASP GLY ARG SER VAL LEU LYS THR GLY THR SEQRES 11 A 143 THR GLU LYS ASP VAL VAL CYS GLY PRO LEU VAL PRO ARG SEQRES 1 B 143 LEU GLU VAL GLN ASN SER CYS ASP ASN CYS GLN PRO GLY SEQRES 2 B 143 THR PHE CYS ARG LYS TYR ASN PRO VAL CYS LYS SER CYS SEQRES 3 B 143 PRO PRO SER THR PHE SER SER ILE GLY GLY GLN PRO ASN SEQRES 4 B 143 CYS ASN ILE CYS ARG VAL CYS ALA GLY TYR PHE ARG PHE SEQRES 5 B 143 LYS LYS PHE CYS SER SER THR HIS ASN ALA GLU CYS GLU SEQRES 6 B 143 CYS ILE GLU GLY PHE HIS CYS LEU GLY PRO GLN CYS THR SEQRES 7 B 143 ARG CYS GLU LYS ASP CYS ARG PRO GLY GLN GLU LEU THR SEQRES 8 B 143 LYS GLN GLY CYS LYS THR CYS SER LEU GLY THR PHE ASN SEQRES 9 B 143 ASP GLN ALA GLY THR GLY VAL CYS ARG PRO TRP THR ASN SEQRES 10 B 143 CYS SER LEU ASP GLY ARG SER VAL LEU LYS THR GLY THR SEQRES 11 B 143 THR GLU LYS ASP VAL VAL CYS GLY PRO LEU VAL PRO ARG HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET FUC C 5 10 HET NAG A 201 14 HET GOL A 202 6 HET SO4 A 203 5 HET GOL B 206 6 HET SO4 B 207 5 HET SO4 B 208 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NAG 3(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 3 MAN C6 H12 O6 FORMUL 3 FUC C6 H12 O5 FORMUL 5 GOL 2(C3 H8 O3) FORMUL 6 SO4 3(O4 S 2-) FORMUL 10 HOH *115(H2 O) HELIX 1 AA1 CYS B 139 GLY B 143 5 5 SHEET 1 AA1 2 PHE A 71 LYS A 75 0 SHEET 2 AA1 2 GLU A 84 CYS A 87 -1 O GLU A 84 N LYS A 74 SHEET 1 AA2 2 PHE A 91 LEU A 94 0 SHEET 2 AA2 2 ARG A 100 LYS A 103 -1 O GLU A 102 N HIS A 92 SHEET 1 AA3 2 GLN A 109 THR A 112 0 SHEET 2 AA3 2 GLY A 115 THR A 118 -1 O GLY A 115 N THR A 112 SHEET 1 AA4 2 THR A 123 PHE A 124 0 SHEET 2 AA4 2 ARG A 134 PRO A 135 -1 O ARG A 134 N PHE A 124 SHEET 1 AA5 2 ARG A 144 LYS A 148 0 SHEET 2 AA5 2 VAL A 157 LEU A 161 -1 O GLY A 159 N SER A 145 SHEET 1 AA6 2 PHE B 71 LYS B 75 0 SHEET 2 AA6 2 GLU B 84 CYS B 87 -1 O GLU B 84 N LYS B 74 SHEET 1 AA7 2 PHE B 91 LEU B 94 0 SHEET 2 AA7 2 ARG B 100 LYS B 103 -1 O GLU B 102 N HIS B 92 SHEET 1 AA8 2 GLN B 109 THR B 112 0 SHEET 2 AA8 2 GLY B 115 THR B 118 -1 O GLY B 115 N THR B 112 SHEET 1 AA9 2 THR B 123 PHE B 124 0 SHEET 2 AA9 2 ARG B 134 PRO B 135 -1 O ARG B 134 N PHE B 124 SHEET 1 AB1 2 VAL B 146 LYS B 148 0 SHEET 2 AB1 2 VAL B 157 CYS B 158 -1 O VAL B 157 N LEU B 147 SSBOND 1 CYS A 47 CYS A 61 1555 1555 2.03 SSBOND 2 CYS A 64 CYS A 77 1555 1555 2.04 SSBOND 3 CYS A 67 CYS A 85 1555 1555 2.03 SSBOND 4 CYS A 87 CYS A 101 1555 1555 2.03 SSBOND 5 CYS A 93 CYS A 98 1555 1555 2.04 SSBOND 6 CYS A 105 CYS A 116 1555 1555 2.04 SSBOND 7 CYS A 119 CYS A 133 1555 1555 2.04 SSBOND 8 CYS A 139 CYS A 158 1555 1555 2.04 SSBOND 9 CYS B 47 CYS B 61 1555 1555 2.03 SSBOND 10 CYS B 64 CYS B 77 1555 1555 2.03 SSBOND 11 CYS B 67 CYS B 85 1555 1555 2.03 SSBOND 12 CYS B 87 CYS B 101 1555 1555 2.04 SSBOND 13 CYS B 93 CYS B 98 1555 1555 2.04 SSBOND 14 CYS B 105 CYS B 116 1555 1555 2.05 SSBOND 15 CYS B 119 CYS B 133 1555 1555 2.04 SSBOND 16 CYS B 139 CYS B 158 1555 1555 2.04 LINK ND2 ASN A 138 C1 NAG A 201 1555 1555 1.45 LINK ND2 ASN B 138 C1 NAG C 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O6 NAG C 1 C1 FUC C 5 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.44 CRYST1 66.639 66.639 82.184 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015006 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015006 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012168 0.00000