HEADER FLUORESCENT PROTEIN 21-JUL-17 5WJ3 TITLE CRYSTAL STRUCTURE OF GREEN FLUORESCENT PROTEIN CLOVER MUTANT TITLE 2 S147C/Q204C COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: JELLYFISH; SOURCE 4 ORGANISM_TAXID: 6100; SOURCE 5 GENE: GFP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS FLUORESCENT PROTEIN, CLOVER, GFP, BETA BARREL EXPDTA X-RAY DIFFRACTION AUTHOR C.LIU,B.C.CAMPBELL,G.A.PETSKO REVDAT 6 15-NOV-23 5WJ3 1 REMARK REVDAT 5 04-OCT-23 5WJ3 1 REMARK REVDAT 4 14-FEB-18 5WJ3 1 JRNL REVDAT 3 31-JAN-18 5WJ3 1 TITLE REVDAT 2 24-JAN-18 5WJ3 1 JRNL REVDAT 1 17-JAN-18 5WJ3 0 JRNL AUTH B.C.CAMPBELL,G.A.PETSKO,C.F.LIU JRNL TITL CRYSTAL STRUCTURE OF GREEN FLUORESCENT PROTEIN CLOVER AND JRNL TITL 2 DESIGN OF CLOVER-BASED REDOX SENSORS. JRNL REF STRUCTURE V. 26 225 2018 JRNL REFN ISSN 1878-4186 JRNL PMID 29307487 JRNL DOI 10.1016/J.STR.2017.12.006 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 110728 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.143 REMARK 3 R VALUE (WORKING SET) : 0.142 REMARK 3 FREE R VALUE : 0.162 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 5377 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.0417 - 4.1974 0.93 3592 197 0.1704 0.1632 REMARK 3 2 4.1974 - 3.3319 0.98 3636 181 0.1543 0.1549 REMARK 3 3 3.3319 - 2.9108 0.99 3681 177 0.1510 0.1802 REMARK 3 4 2.9108 - 2.6447 0.99 3639 186 0.1602 0.1652 REMARK 3 5 2.6447 - 2.4552 0.99 3637 170 0.1541 0.1834 REMARK 3 6 2.4552 - 2.3104 0.99 3609 176 0.1501 0.1641 REMARK 3 7 2.3104 - 2.1947 0.99 3568 189 0.1444 0.1720 REMARK 3 8 2.1947 - 2.0992 0.99 3589 180 0.1367 0.1439 REMARK 3 9 2.0992 - 2.0184 0.99 3555 181 0.1310 0.1380 REMARK 3 10 2.0184 - 1.9487 0.98 3556 186 0.1282 0.1576 REMARK 3 11 1.9487 - 1.8878 0.98 3555 184 0.1296 0.1554 REMARK 3 12 1.8878 - 1.8338 0.98 3533 163 0.1333 0.1598 REMARK 3 13 1.8338 - 1.7855 0.98 3528 178 0.1296 0.1628 REMARK 3 14 1.7855 - 1.7420 0.98 3522 170 0.1276 0.1583 REMARK 3 15 1.7420 - 1.7024 0.98 3500 190 0.1173 0.1465 REMARK 3 16 1.7024 - 1.6661 0.97 3481 185 0.1081 0.1648 REMARK 3 17 1.6661 - 1.6328 0.97 3524 186 0.1053 0.1393 REMARK 3 18 1.6328 - 1.6020 0.97 3442 194 0.1036 0.1272 REMARK 3 19 1.6020 - 1.5734 0.97 3483 171 0.1080 0.1415 REMARK 3 20 1.5734 - 1.5467 0.96 3485 159 0.1130 0.1496 REMARK 3 21 1.5467 - 1.5218 0.97 3460 196 0.1143 0.1628 REMARK 3 22 1.5218 - 1.4983 0.96 3466 176 0.1109 0.1528 REMARK 3 23 1.4983 - 1.4763 0.96 3435 178 0.1165 0.1467 REMARK 3 24 1.4763 - 1.4555 0.96 3460 168 0.1231 0.1906 REMARK 3 25 1.4555 - 1.4358 0.96 3444 158 0.1226 0.1793 REMARK 3 26 1.4358 - 1.4172 0.96 3432 182 0.1249 0.1721 REMARK 3 27 1.4172 - 1.3995 0.96 3391 195 0.1384 0.1912 REMARK 3 28 1.3995 - 1.3826 0.95 3431 171 0.1452 0.1991 REMARK 3 29 1.3826 - 1.3665 0.95 3401 166 0.1505 0.2236 REMARK 3 30 1.3665 - 1.3512 0.93 3316 184 0.1540 0.1944 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3837 REMARK 3 ANGLE : 1.131 5220 REMARK 3 CHIRALITY : 0.086 564 REMARK 3 PLANARITY : 0.006 685 REMARK 3 DIHEDRAL : 8.456 2257 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WJ3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1000229117. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 110794 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.46300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1QYQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS, PH 8.5, 50MM MGCL2, 25% REMARK 280 PEG3350, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.31000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.01500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.01400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.01500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.31000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.01400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 THR A 230 REMARK 465 HIS A 231 REMARK 465 GLY A 232 REMARK 465 MET A 233 REMARK 465 ASP A 234 REMARK 465 GLU A 235 REMARK 465 LEU A 236 REMARK 465 TYR A 237 REMARK 465 LYS A 238 REMARK 465 GLY B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 VAL B 1 REMARK 465 THR B 230 REMARK 465 HIS B 231 REMARK 465 GLY B 232 REMARK 465 MET B 233 REMARK 465 ASP B 234 REMARK 465 GLU B 235 REMARK 465 LEU B 236 REMARK 465 TYR B 237 REMARK 465 LYS B 238 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 597 O HOH A 603 1.87 REMARK 500 O HOH B 604 O HOH B 654 1.88 REMARK 500 NZ LYS B 101 O HOH B 301 1.95 REMARK 500 O HOH A 387 O HOH A 561 1.96 REMARK 500 O HOH A 570 O HOH B 557 1.99 REMARK 500 O HOH A 372 O HOH A 543 1.99 REMARK 500 O HOH B 312 O HOH B 318 2.01 REMARK 500 O HOH A 568 O HOH A 597 2.01 REMARK 500 O HOH B 303 O HOH B 608 2.01 REMARK 500 O HOH A 571 O HOH A 657 2.02 REMARK 500 O HOH A 347 O HOH A 568 2.03 REMARK 500 O HOH A 460 O HOH A 516 2.03 REMARK 500 O HOH B 461 O HOH B 580 2.04 REMARK 500 OE2 GLU A 132 O HOH A 301 2.04 REMARK 500 OE1 GLU B 95 O HOH B 302 2.05 REMARK 500 OE1 GLN A 157 O HOH A 302 2.05 REMARK 500 NH1 ARG B 168 O HOH B 303 2.07 REMARK 500 O HOH A 400 O HOH A 536 2.07 REMARK 500 O HOH B 657 O HOH B 668 2.08 REMARK 500 O HOH A 537 O HOH A 549 2.08 REMARK 500 OE1 GLU A 5 O HOH A 303 2.09 REMARK 500 O HOH A 575 O HOH B 595 2.09 REMARK 500 OE1 GLU A 142 O HOH A 304 2.09 REMARK 500 O HOH A 589 O HOH A 607 2.10 REMARK 500 O HOH B 302 O HOH B 573 2.12 REMARK 500 O HOH B 557 O HOH B 593 2.13 REMARK 500 O HOH B 339 O HOH B 528 2.14 REMARK 500 O HOH B 412 O HOH B 576 2.15 REMARK 500 OE1 GLU A 124 O HOH A 305 2.16 REMARK 500 O HOH B 652 O HOH B 676 2.16 REMARK 500 O HOH A 570 O HOH A 588 2.17 REMARK 500 O HOH B 523 O HOH B 551 2.17 REMARK 500 O HOH B 303 O HOH B 485 2.17 REMARK 500 NZ LYS A 107 O HOH A 306 2.18 REMARK 500 O HOH A 463 O HOH A 613 2.18 REMARK 500 OD2 ASP A 102 O HOH A 307 2.18 REMARK 500 NE2 GLN B 184 O HOH B 304 2.18 REMARK 500 O HOH A 585 O HOH A 612 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 438 O HOH B 323 2455 2.09 REMARK 500 O HOH A 544 O HOH B 359 4445 2.10 REMARK 500 O HOH A 628 O HOH B 598 4545 2.18 REMARK 500 O HOH A 470 O HOH B 573 3554 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 222 CD GLU A 222 OE1 -0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 103 -157.88 -153.57 REMARK 500 LYS A 156 3.06 -68.80 REMARK 500 LYS A 158 26.59 -149.53 REMARK 500 ASP B 103 -159.54 -153.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 663 DISTANCE = 5.85 ANGSTROMS DBREF 5WJ3 A 3 238 UNP P42212 GFP_AEQVI 3 238 DBREF 5WJ3 B 3 238 UNP P42212 GFP_AEQVI 3 238 SEQADV 5WJ3 GLY A -2 UNP P42212 EXPRESSION TAG SEQADV 5WJ3 HIS A -1 UNP P42212 EXPRESSION TAG SEQADV 5WJ3 MET A 0 UNP P42212 EXPRESSION TAG SEQADV 5WJ3 VAL A 1 UNP P42212 EXPRESSION TAG SEQADV 5WJ3 SER A 2 UNP P42212 EXPRESSION TAG SEQADV 5WJ3 ARG A 30 UNP P42212 SER 30 ENGINEERED MUTATION SEQADV 5WJ3 ASN A 39 UNP P42212 TYR 39 ENGINEERED MUTATION SEQADV 5WJ3 CR2 A 66 UNP P42212 SER 65 CHROMOPHORE SEQADV 5WJ3 CR2 A 66 UNP P42212 TYR 66 CHROMOPHORE SEQADV 5WJ3 CR2 A 66 UNP P42212 GLY 67 CHROMOPHORE SEQADV 5WJ3 ALA A 69 UNP P42212 GLN 69 ENGINEERED MUTATION SEQADV 5WJ3 SER A 99 UNP P42212 PHE 99 ENGINEERED MUTATION SEQADV 5WJ3 THR A 105 UNP P42212 ASN 105 ENGINEERED MUTATION SEQADV 5WJ3 PHE A 145 UNP P42212 TYR 145 ENGINEERED MUTATION SEQADV 5WJ3 CYS A 147 UNP P42212 SER 147 ENGINEERED MUTATION SEQADV 5WJ3 THR A 153 UNP P42212 MET 153 ENGINEERED MUTATION SEQADV 5WJ3 ALA A 163 UNP P42212 VAL 163 ENGINEERED MUTATION SEQADV 5WJ3 VAL A 171 UNP P42212 ILE 171 ENGINEERED MUTATION SEQADV 5WJ3 HIS A 203 UNP P42212 THR 203 ENGINEERED MUTATION SEQADV 5WJ3 CYS A 204 UNP P42212 GLN 204 ENGINEERED MUTATION SEQADV 5WJ3 GLY B -2 UNP P42212 EXPRESSION TAG SEQADV 5WJ3 HIS B -1 UNP P42212 EXPRESSION TAG SEQADV 5WJ3 MET B 0 UNP P42212 EXPRESSION TAG SEQADV 5WJ3 VAL B 1 UNP P42212 EXPRESSION TAG SEQADV 5WJ3 SER B 2 UNP P42212 EXPRESSION TAG SEQADV 5WJ3 ARG B 30 UNP P42212 SER 30 ENGINEERED MUTATION SEQADV 5WJ3 ASN B 39 UNP P42212 TYR 39 ENGINEERED MUTATION SEQADV 5WJ3 CR2 B 66 UNP P42212 SER 65 CHROMOPHORE SEQADV 5WJ3 CR2 B 66 UNP P42212 TYR 66 CHROMOPHORE SEQADV 5WJ3 CR2 B 66 UNP P42212 GLY 67 CHROMOPHORE SEQADV 5WJ3 ALA B 69 UNP P42212 GLN 69 ENGINEERED MUTATION SEQADV 5WJ3 SER B 99 UNP P42212 PHE 99 ENGINEERED MUTATION SEQADV 5WJ3 THR B 105 UNP P42212 ASN 105 ENGINEERED MUTATION SEQADV 5WJ3 PHE B 145 UNP P42212 TYR 145 ENGINEERED MUTATION SEQADV 5WJ3 CYS B 147 UNP P42212 SER 147 ENGINEERED MUTATION SEQADV 5WJ3 THR B 153 UNP P42212 MET 153 ENGINEERED MUTATION SEQADV 5WJ3 ALA B 163 UNP P42212 VAL 163 ENGINEERED MUTATION SEQADV 5WJ3 VAL B 171 UNP P42212 ILE 171 ENGINEERED MUTATION SEQADV 5WJ3 HIS B 203 UNP P42212 THR 203 ENGINEERED MUTATION SEQADV 5WJ3 CYS B 204 UNP P42212 GLN 204 ENGINEERED MUTATION SEQRES 1 A 239 GLY HIS MET VAL SER LYS GLY GLU GLU LEU PHE THR GLY SEQRES 2 A 239 VAL VAL PRO ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN SEQRES 3 A 239 GLY HIS LYS PHE SER VAL ARG GLY GLU GLY GLU GLY ASP SEQRES 4 A 239 ALA THR ASN GLY LYS LEU THR LEU LYS PHE ILE CYS THR SEQRES 5 A 239 THR GLY LYS LEU PRO VAL PRO TRP PRO THR LEU VAL THR SEQRES 6 A 239 THR PHE CR2 VAL ALA CYS PHE SER ARG TYR PRO ASP HIS SEQRES 7 A 239 MET LYS GLN HIS ASP PHE PHE LYS SER ALA MET PRO GLU SEQRES 8 A 239 GLY TYR VAL GLN GLU ARG THR ILE SER PHE LYS ASP ASP SEQRES 9 A 239 GLY THR TYR LYS THR ARG ALA GLU VAL LYS PHE GLU GLY SEQRES 10 A 239 ASP THR LEU VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP SEQRES 11 A 239 PHE LYS GLU ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU SEQRES 12 A 239 TYR ASN PHE ASN CYS HIS ASN VAL TYR ILE THR ALA ASP SEQRES 13 A 239 LYS GLN LYS ASN GLY ILE LYS ALA ASN PHE LYS ILE ARG SEQRES 14 A 239 HIS ASN VAL GLU ASP GLY SER VAL GLN LEU ALA ASP HIS SEQRES 15 A 239 TYR GLN GLN ASN THR PRO ILE GLY ASP GLY PRO VAL LEU SEQRES 16 A 239 LEU PRO ASP ASN HIS TYR LEU SER HIS CYS SER ALA LEU SEQRES 17 A 239 SER LYS ASP PRO ASN GLU LYS ARG ASP HIS MET VAL LEU SEQRES 18 A 239 LEU GLU PHE VAL THR ALA ALA GLY ILE THR HIS GLY MET SEQRES 19 A 239 ASP GLU LEU TYR LYS SEQRES 1 B 239 GLY HIS MET VAL SER LYS GLY GLU GLU LEU PHE THR GLY SEQRES 2 B 239 VAL VAL PRO ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN SEQRES 3 B 239 GLY HIS LYS PHE SER VAL ARG GLY GLU GLY GLU GLY ASP SEQRES 4 B 239 ALA THR ASN GLY LYS LEU THR LEU LYS PHE ILE CYS THR SEQRES 5 B 239 THR GLY LYS LEU PRO VAL PRO TRP PRO THR LEU VAL THR SEQRES 6 B 239 THR PHE CR2 VAL ALA CYS PHE SER ARG TYR PRO ASP HIS SEQRES 7 B 239 MET LYS GLN HIS ASP PHE PHE LYS SER ALA MET PRO GLU SEQRES 8 B 239 GLY TYR VAL GLN GLU ARG THR ILE SER PHE LYS ASP ASP SEQRES 9 B 239 GLY THR TYR LYS THR ARG ALA GLU VAL LYS PHE GLU GLY SEQRES 10 B 239 ASP THR LEU VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP SEQRES 11 B 239 PHE LYS GLU ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU SEQRES 12 B 239 TYR ASN PHE ASN CYS HIS ASN VAL TYR ILE THR ALA ASP SEQRES 13 B 239 LYS GLN LYS ASN GLY ILE LYS ALA ASN PHE LYS ILE ARG SEQRES 14 B 239 HIS ASN VAL GLU ASP GLY SER VAL GLN LEU ALA ASP HIS SEQRES 15 B 239 TYR GLN GLN ASN THR PRO ILE GLY ASP GLY PRO VAL LEU SEQRES 16 B 239 LEU PRO ASP ASN HIS TYR LEU SER HIS CYS SER ALA LEU SEQRES 17 B 239 SER LYS ASP PRO ASN GLU LYS ARG ASP HIS MET VAL LEU SEQRES 18 B 239 LEU GLU PHE VAL THR ALA ALA GLY ILE THR HIS GLY MET SEQRES 19 B 239 ASP GLU LEU TYR LYS MODRES 5WJ3 CR2 A 66 GLY CHROMOPHORE MODRES 5WJ3 CR2 B 66 GLY CHROMOPHORE HET CR2 A 66 19 HET CR2 B 66 19 HETNAM CR2 {(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]- HETNAM 2 CR2 5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC ACID HETSYN CR2 CHROMOPHORE (GLY-TYR-GLY) FORMUL 1 CR2 2(C13 H13 N3 O4) FORMUL 3 HOH *741(H2 O) HELIX 1 AA1 SER A 2 LEU A 7 1 6 HELIX 2 AA2 PRO A 56 VAL A 61 5 6 HELIX 3 AA3 VAL A 68 SER A 72 5 5 HELIX 4 AA4 PRO A 75 HIS A 81 5 7 HELIX 5 AA5 ASP A 82 ALA A 87 1 6 HELIX 6 AA6 LYS B 3 THR B 9 5 7 HELIX 7 AA7 PRO B 56 VAL B 61 5 6 HELIX 8 AA8 VAL B 68 SER B 72 5 5 HELIX 9 AA9 PRO B 75 HIS B 81 5 7 HELIX 10 AB1 ASP B 82 ALA B 87 1 6 HELIX 11 AB2 LYS B 156 ASN B 159 5 4 SHEET 1 AA112 VAL A 11 VAL A 22 0 SHEET 2 AA112 HIS A 25 ASP A 36 -1 O GLY A 31 N VAL A 16 SHEET 3 AA112 LYS A 41 CYS A 48 -1 O LYS A 41 N ASP A 36 SHEET 4 AA112 HIS A 217 GLY A 228 -1 O LEU A 220 N LEU A 44 SHEET 5 AA112 HIS A 199 SER A 208 -1 N SER A 202 O THR A 225 SHEET 6 AA112 HIS A 148 ALA A 154 -1 N ILE A 152 O HIS A 199 SHEET 7 AA112 ILE A 161 ASN A 170 -1 O LYS A 162 N THR A 153 SHEET 8 AA112 VAL A 176 PRO A 187 -1 O HIS A 181 N PHE A 165 SHEET 9 AA112 TYR A 92 PHE A 100 -1 N VAL A 93 O THR A 186 SHEET 10 AA112 THR A 105 GLU A 115 -1 O TYR A 106 N ILE A 98 SHEET 11 AA112 THR A 118 ILE A 128 -1 O THR A 118 N GLU A 115 SHEET 12 AA112 VAL A 11 VAL A 22 1 N ASP A 21 O GLY A 127 SHEET 1 AA212 VAL B 11 VAL B 22 0 SHEET 2 AA212 HIS B 25 ASP B 36 -1 O PHE B 27 N GLY B 20 SHEET 3 AA212 LYS B 41 CYS B 48 -1 O LYS B 41 N ASP B 36 SHEET 4 AA212 HIS B 217 ALA B 227 -1 O LEU B 220 N LEU B 44 SHEET 5 AA212 HIS B 199 SER B 208 -1 N SER B 202 O THR B 225 SHEET 6 AA212 HIS B 148 ASP B 155 -1 N ILE B 152 O HIS B 199 SHEET 7 AA212 GLY B 160 ASN B 170 -1 O GLY B 160 N ASP B 155 SHEET 8 AA212 VAL B 176 PRO B 187 -1 O HIS B 181 N PHE B 165 SHEET 9 AA212 TYR B 92 PHE B 100 -1 N VAL B 93 O THR B 186 SHEET 10 AA212 THR B 105 GLU B 115 -1 O TYR B 106 N ILE B 98 SHEET 11 AA212 THR B 118 ILE B 128 -1 O VAL B 120 N LYS B 113 SHEET 12 AA212 VAL B 11 VAL B 22 1 N ASP B 21 O GLY B 127 SSBOND 1 CYS A 147 CYS A 204 1555 1555 2.06 SSBOND 2 CYS B 147 CYS B 204 1555 1555 2.06 LINK C PHE A 64 N1 CR2 A 66 1555 1555 1.34 LINK C3 CR2 A 66 N VAL A 68 1555 1555 1.26 LINK C PHE B 64 N1 CR2 B 66 1555 1555 1.31 LINK C3 CR2 B 66 N VAL B 68 1555 1555 1.26 CISPEP 1 MET A 88 PRO A 89 0 6.88 CISPEP 2 MET B 88 PRO B 89 0 7.10 CRYST1 68.620 82.028 92.030 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014573 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012191 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010866 0.00000