HEADER IMMUNE SYSTEM 25-JUL-17 5WKZ TITLE VH1-69 GERMLINE ANTIBODY PREDICTED FROM CR6261 COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGLOBULIN HEAVY VARIABLE 1-69D,IGG H CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LAMBDA-CHAIN (AA -20 TO 215); COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IGHV1-69D; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS VH1-69 GERMLINE, CR6261, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.LANG,P.S.LEE REVDAT 2 11-DEC-19 5WKZ 1 REMARK REVDAT 1 01-AUG-18 5WKZ 0 JRNL AUTH I.A.WILSON,S.LANG,Y.KUROSAWA,N.OHSHIMA,T.OTA,J.ABADEJOS, JRNL AUTH 2 P.S.LEE,D.NEMAZEE JRNL TITL ANTI-IDIOTYPIC ANTIBODY K1-18 ENGAGES VH1-69 PRECURSOR AND JRNL TITL 2 AFFINITY-MATURED, ANTI-STEM ANTIBODIES THROUGH MIMICRY OF JRNL TITL 3 THE HA STEM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 55356 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.4408 - 5.0150 0.99 2876 140 0.1986 0.2166 REMARK 3 2 5.0150 - 3.9812 0.99 2730 138 0.1575 0.1869 REMARK 3 3 3.9812 - 3.4781 1.00 2709 134 0.1855 0.2036 REMARK 3 4 3.4781 - 3.1601 1.00 2642 156 0.1964 0.2481 REMARK 3 5 3.1601 - 2.9337 1.00 2643 132 0.2105 0.2115 REMARK 3 6 2.9337 - 2.7607 1.00 2644 148 0.2176 0.2220 REMARK 3 7 2.7607 - 2.6225 1.00 2626 135 0.2218 0.2708 REMARK 3 8 2.6225 - 2.5083 1.00 2642 134 0.2230 0.2590 REMARK 3 9 2.5083 - 2.4118 1.00 2610 133 0.2265 0.2485 REMARK 3 10 2.4118 - 2.3285 1.00 2623 137 0.2260 0.2515 REMARK 3 11 2.3285 - 2.2557 1.00 2578 157 0.2229 0.2347 REMARK 3 12 2.2557 - 2.1913 1.00 2618 147 0.2190 0.2220 REMARK 3 13 2.1913 - 2.1336 1.00 2590 140 0.2265 0.2446 REMARK 3 14 2.1336 - 2.0815 1.00 2598 150 0.2349 0.2894 REMARK 3 15 2.0815 - 2.0342 1.00 2583 152 0.2311 0.2940 REMARK 3 16 2.0342 - 1.9909 1.00 2586 136 0.2442 0.2527 REMARK 3 17 1.9909 - 1.9511 1.00 2603 125 0.2435 0.2933 REMARK 3 18 1.9511 - 1.9143 1.00 2572 149 0.2556 0.2765 REMARK 3 19 1.9143 - 1.8801 1.00 2608 123 0.2735 0.2995 REMARK 3 20 1.8801 - 1.8482 0.96 2464 145 0.3065 0.3651 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3296 REMARK 3 ANGLE : 0.908 4502 REMARK 3 CHIRALITY : 0.060 517 REMARK 3 PLANARITY : 0.006 571 REMARK 3 DIHEDRAL : 3.236 2302 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WKZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1000229196. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 77.2 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03318 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55408 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULFATE 0.08 M SODIUM REMARK 280 ACETATE PH 4.60 20% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 42.11650 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.11650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 88.77200 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.11650 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 42.11650 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 88.77200 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.11650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.11650 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 88.77200 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 42.11650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.11650 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 88.77200 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH H 412 LIES ON A SPECIAL POSITION. REMARK 375 HOH H 527 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS H 222 REMARK 465 SER H 223 REMARK 465 CYS H 224 REMARK 465 GLY H 225 REMARK 465 SER H 226 REMARK 465 GLY H 227 REMARK 465 GLY H 228 REMARK 465 GLY H 229 REMARK 465 LEU H 230 REMARK 465 ASN H 231 REMARK 465 ASP H 232 REMARK 465 ILE H 233 REMARK 465 PHE H 234 REMARK 465 GLU H 235 REMARK 465 ALA H 236 REMARK 465 GLN H 237 REMARK 465 LYS H 238 REMARK 465 ILE H 239 REMARK 465 GLU H 240 REMARK 465 TRP H 241 REMARK 465 HIS H 242 REMARK 465 GLU H 243 REMARK 465 CYS H 244 REMARK 465 HIS H 245 REMARK 465 HIS H 246 REMARK 465 HIS H 247 REMARK 465 HIS H 248 REMARK 465 HIS H 249 REMARK 465 HIS H 250 REMARK 465 GLN L -1 REMARK 465 SER L 0 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 465 SER L 215 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH H 494 O HOH H 510 1.90 REMARK 500 O HOH L 417 O HOH L 468 2.01 REMARK 500 O HOH H 502 O HOH H 535 2.04 REMARK 500 O HOH L 471 O HOH L 483 2.07 REMARK 500 OG SER L 156 O HOH L 301 2.08 REMARK 500 O HOH L 402 O HOH L 413 2.08 REMARK 500 O HOH H 496 O HOH H 522 2.11 REMARK 500 O HOH L 455 O HOH L 483 2.12 REMARK 500 O HOH H 459 O HOH H 533 2.13 REMARK 500 O HOH H 479 O HOH H 548 2.15 REMARK 500 OE1 GLN L 187 O HOH L 302 2.17 REMARK 500 O LYS L 189 O HOH L 303 2.18 REMARK 500 O HOH H 453 O HOH H 492 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH H 431 O HOH L 385 2675 2.10 REMARK 500 O HOH H 554 O HOH L 432 5557 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG H 87 NE - CZ - NH1 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN L 26 -88.36 -111.54 REMARK 500 ASN L 50 -47.13 73.65 REMARK 500 ASN L 51 12.38 -143.89 REMARK 500 ASP L 154 -101.42 55.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 H 301 DBREF1 5WKZ H 1 98 UNP HV69D_HUMAN DBREF2 5WKZ H A0A0B4J2H0 20 117 DBREF 5WKZ H 114 224 UNP S6BAM6 S6BAM6_HUMAN 137 247 DBREF 5WKZ L -1 215 UNP A2NUT2 A2NUT2_HUMAN 20 235 SEQADV 5WKZ HIS H 99 UNP A0A0B4J2H LINKER SEQADV 5WKZ MET H 100 UNP A0A0B4J2H LINKER SEQADV 5WKZ GLY H 101 UNP A0A0B4J2H LINKER SEQADV 5WKZ TYR H 102 UNP A0A0B4J2H LINKER SEQADV 5WKZ GLN H 103 UNP A0A0B4J2H LINKER SEQADV 5WKZ LEU H 104 UNP A0A0B4J2H LINKER SEQADV 5WKZ ARG H 105 UNP A0A0B4J2H LINKER SEQADV 5WKZ GLU H 106 UNP A0A0B4J2H LINKER SEQADV 5WKZ THR H 107 UNP A0A0B4J2H LINKER SEQADV 5WKZ MET H 108 UNP A0A0B4J2H LINKER SEQADV 5WKZ ASP H 109 UNP A0A0B4J2H LINKER SEQADV 5WKZ VAL H 110 UNP A0A0B4J2H LINKER SEQADV 5WKZ TRP H 111 UNP A0A0B4J2H LINKER SEQADV 5WKZ GLY H 112 UNP A0A0B4J2H LINKER SEQADV 5WKZ LYS H 113 UNP A0A0B4J2H LINKER SEQADV 5WKZ GLY H 225 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ SER H 226 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ GLY H 227 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ GLY H 228 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ GLY H 229 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ LEU H 230 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ ASN H 231 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ ASP H 232 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ ILE H 233 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ PHE H 234 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ GLU H 235 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ ALA H 236 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ GLN H 237 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ LYS H 238 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ ILE H 239 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ GLU H 240 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ TRP H 241 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ HIS H 242 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ GLU H 243 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ CYS H 244 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ HIS H 245 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ HIS H 246 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ HIS H 247 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ HIS H 248 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ HIS H 249 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ HIS H 250 UNP S6BAM6 EXPRESSION TAG SEQADV 5WKZ TYR L 97 UNP A2NUT2 INSERTION SEQADV 5WKZ VAL L 98 UNP A2NUT2 GLY 118 CONFLICT SEQRES 1 H 250 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 250 PRO GLY SER SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 250 GLY THR PHE SER SER TYR ALA ILE SER TRP VAL ARG GLN SEQRES 4 H 250 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY GLY ILE ILE SEQRES 5 H 250 PRO ILE PHE GLY THR ALA ASN TYR ALA GLN LYS PHE GLN SEQRES 6 H 250 GLY ARG VAL THR ILE THR ALA ASP GLU SER THR SER THR SEQRES 7 H 250 ALA TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 250 ALA VAL TYR TYR CYS ALA ARG HIS MET GLY TYR GLN LEU SEQRES 9 H 250 ARG GLU THR MET ASP VAL TRP GLY LYS GLY THR THR VAL SEQRES 10 H 250 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 H 250 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 H 250 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 H 250 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 H 250 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 H 250 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 H 250 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 H 250 LYS PRO SER ASN THR LYS VAL ASP LYS ARG VAL GLU PRO SEQRES 18 H 250 LYS SER CYS GLY SER GLY GLY GLY LEU ASN ASP ILE PHE SEQRES 19 H 250 GLU ALA GLN LYS ILE GLU TRP HIS GLU CYS HIS HIS HIS SEQRES 20 H 250 HIS HIS HIS SEQRES 1 L 217 GLN SER VAL LEU THR GLN PRO PRO SER VAL SER ALA ALA SEQRES 2 L 217 PRO GLY GLN LYS VAL THR ILE SER CYS SER GLY SER SER SEQRES 3 L 217 SER ASN ILE GLY ASN ASN TYR VAL SER TRP TYR GLN GLN SEQRES 4 L 217 LEU PRO GLY THR ALA PRO LYS LEU LEU ILE TYR ASP ASN SEQRES 5 L 217 ASN LYS ARG PRO SER GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 L 217 SER LYS SER GLY THR SER ALA THR LEU GLY ILE THR GLY SEQRES 7 L 217 LEU GLN THR GLY ASP GLU ALA ASP TYR TYR CYS GLY THR SEQRES 8 L 217 TRP ASP SER SER LEU SER ALA TYR VAL VAL PHE GLY GLY SEQRES 9 L 217 GLY THR LYS LEU THR VAL LEU GLY GLN PRO LYS ALA ALA SEQRES 10 L 217 PRO SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU SEQRES 11 L 217 GLN ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP SEQRES 12 L 217 PHE TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SEQRES 13 L 217 SER SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SEQRES 14 L 217 SER LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR SEQRES 15 L 217 LEU SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER SEQRES 16 L 217 TYR SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU SEQRES 17 L 217 LYS THR VAL ALA PRO THR GLU CYS SER HET SO4 H 301 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *343(H2 O) HELIX 1 AA1 PRO H 53 GLY H 56 5 4 HELIX 2 AA2 GLN H 62 GLN H 65 5 4 HELIX 3 AA3 ARG H 87 THR H 91 5 5 HELIX 4 AA4 SER H 135 LYS H 137 5 3 HELIX 5 AA5 SER H 164 ALA H 166 5 3 HELIX 6 AA6 SER H 195 LEU H 197 5 3 HELIX 7 AA7 LYS H 209 ASN H 212 5 4 HELIX 8 AA8 ASN L 26 ASN L 30 5 5 HELIX 9 AA9 GLN L 78 GLU L 82 5 5 HELIX 10 AB1 SER L 124 ALA L 130 1 7 HELIX 11 AB2 THR L 184 HIS L 191 1 8 SHEET 1 AA1 4 GLN H 3 GLN H 6 0 SHEET 2 AA1 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AA1 4 THR H 78 LEU H 83 -1 O MET H 81 N VAL H 20 SHEET 4 AA1 4 VAL H 68 ASP H 73 -1 N THR H 69 O GLU H 82 SHEET 1 AA2 6 GLU H 10 LYS H 12 0 SHEET 2 AA2 6 THR H 115 VAL H 119 1 O THR H 118 N LYS H 12 SHEET 3 AA2 6 ALA H 92 HIS H 99 -1 N TYR H 94 O THR H 115 SHEET 4 AA2 6 ILE H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA2 6 LEU H 45 ILE H 52 -1 O MET H 48 N TRP H 36 SHEET 6 AA2 6 THR H 57 TYR H 60 -1 O THR H 57 N ILE H 52 SHEET 1 AA3 4 GLU H 10 LYS H 12 0 SHEET 2 AA3 4 THR H 115 VAL H 119 1 O THR H 118 N LYS H 12 SHEET 3 AA3 4 ALA H 92 HIS H 99 -1 N TYR H 94 O THR H 115 SHEET 4 AA3 4 MET H 108 TRP H 111 -1 O VAL H 110 N ARG H 98 SHEET 1 AA4 4 SER H 128 LEU H 132 0 SHEET 2 AA4 4 THR H 143 TYR H 153 -1 O LEU H 149 N PHE H 130 SHEET 3 AA4 4 TYR H 184 PRO H 193 -1 O TYR H 184 N TYR H 153 SHEET 4 AA4 4 VAL H 171 THR H 173 -1 N HIS H 172 O VAL H 189 SHEET 1 AA5 4 THR H 139 SER H 140 0 SHEET 2 AA5 4 THR H 143 TYR H 153 -1 O THR H 143 N SER H 140 SHEET 3 AA5 4 TYR H 184 PRO H 193 -1 O TYR H 184 N TYR H 153 SHEET 4 AA5 4 VAL H 177 LEU H 178 -1 N VAL H 177 O SER H 185 SHEET 1 AA6 3 THR H 159 TRP H 162 0 SHEET 2 AA6 3 ILE H 203 HIS H 208 -1 O ASN H 205 N SER H 161 SHEET 3 AA6 3 THR H 213 ARG H 218 -1 O THR H 213 N HIS H 208 SHEET 1 AA7 5 SER L 7 ALA L 10 0 SHEET 2 AA7 5 THR L 104 VAL L 108 1 O THR L 107 N VAL L 8 SHEET 3 AA7 5 ALA L 83 ASP L 91 -1 N ALA L 83 O LEU L 106 SHEET 4 AA7 5 SER L 33 GLN L 37 -1 N SER L 33 O GLY L 88 SHEET 5 AA7 5 LYS L 44 ILE L 47 -1 O LEU L 46 N TRP L 34 SHEET 1 AA8 4 SER L 7 ALA L 10 0 SHEET 2 AA8 4 THR L 104 VAL L 108 1 O THR L 107 N VAL L 8 SHEET 3 AA8 4 ALA L 83 ASP L 91 -1 N ALA L 83 O LEU L 106 SHEET 4 AA8 4 TYR L 97 PHE L 100 -1 O TYR L 97 N ASP L 91 SHEET 1 AA9 3 VAL L 16 SER L 21 0 SHEET 2 AA9 3 SER L 69 ILE L 74 -1 O LEU L 72 N ILE L 18 SHEET 3 AA9 3 PHE L 61 SER L 66 -1 N SER L 62 O GLY L 73 SHEET 1 AB1 4 SER L 117 PHE L 121 0 SHEET 2 AB1 4 ALA L 133 PHE L 142 -1 O LEU L 138 N THR L 119 SHEET 3 AB1 4 TYR L 175 LEU L 183 -1 O ALA L 177 N ILE L 139 SHEET 4 AB1 4 VAL L 162 THR L 164 -1 N GLU L 163 O TYR L 180 SHEET 1 AB2 4 SER L 117 PHE L 121 0 SHEET 2 AB2 4 ALA L 133 PHE L 142 -1 O LEU L 138 N THR L 119 SHEET 3 AB2 4 TYR L 175 LEU L 183 -1 O ALA L 177 N ILE L 139 SHEET 4 AB2 4 SER L 168 LYS L 169 -1 N SER L 168 O ALA L 176 SHEET 1 AB3 4 SER L 156 VAL L 158 0 SHEET 2 AB3 4 THR L 148 ALA L 153 -1 N ALA L 153 O SER L 156 SHEET 3 AB3 4 TYR L 194 HIS L 200 -1 O GLN L 197 N ALA L 150 SHEET 4 AB3 4 SER L 203 VAL L 209 -1 O VAL L 205 N VAL L 198 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.05 SSBOND 2 CYS H 148 CYS H 204 1555 1555 2.04 SSBOND 3 CYS L 20 CYS L 87 1555 1555 2.05 SSBOND 4 CYS L 137 CYS L 196 1555 1555 2.05 CISPEP 1 PHE H 154 PRO H 155 0 -2.54 CISPEP 2 GLU H 156 PRO H 157 0 3.12 CISPEP 3 TYR L 143 PRO L 144 0 -0.45 SITE 1 AC1 5 GLY H 27 THR H 28 TYR H 32 ARG H 98 SITE 2 AC1 5 HOH H 430 CRYST1 84.233 84.233 177.544 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011872 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011872 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005632 0.00000