HEADER LIGASE 28-JUL-17 5WM7 TITLE CRYSTAL STRUCTURE OF CAHJ IN COMPLEX WITH AMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: SALICYLATE-AMP LIGASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES GANDOCAENSIS; SOURCE 3 ORGANISM_TAXID: 1649596; SOURCE 4 GENE: CAHJ; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS LIGASE, ADENYLATION DOMAIN, PEPTIDE SYNTHETASE EXPDTA X-RAY DIFFRACTION AUTHOR A.P.SIKKEMA,J.L.SMITH REVDAT 5 04-OCT-23 5WM7 1 REMARK REVDAT 4 25-DEC-19 5WM7 1 REMARK REVDAT 3 29-AUG-18 5WM7 1 JRNL REVDAT 2 04-JUL-18 5WM7 1 JRNL REVDAT 1 23-MAY-18 5WM7 0 JRNL AUTH A.TRIPATHI,S.R.PARK,A.P.SIKKEMA,H.J.CHO,J.WU,B.LEE,C.XI, JRNL AUTH 2 J.L.SMITH,D.H.SHERMAN JRNL TITL A DEFINED AND FLEXIBLE POCKET EXPLAINS ARYL SUBSTRATE JRNL TITL 2 PROMISCUITY OF THE CAHUITAMYCIN STARTER UNIT-ACTIVATING JRNL TITL 3 ENZYME CAHJ. JRNL REF CHEMBIOCHEM V. 19 1595 2018 JRNL REFN ESSN 1439-7633 JRNL PMID 29742306 JRNL DOI 10.1002/CBIC.201800233 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 56.730 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 70015 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.136 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.930 REMARK 3 FREE R VALUE TEST SET COUNT : 1163 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.6830 - 4.2852 0.82 8286 136 0.1043 0.1300 REMARK 3 2 4.2852 - 3.4022 0.83 8339 137 0.1119 0.1746 REMARK 3 3 3.4022 - 2.9724 0.84 8373 139 0.1337 0.1826 REMARK 3 4 2.9724 - 2.7007 0.83 8316 159 0.1359 0.1627 REMARK 3 5 2.7007 - 2.5072 0.81 8147 140 0.1489 0.1581 REMARK 3 6 2.5072 - 2.3594 0.83 8296 115 0.1453 0.1828 REMARK 3 7 2.3594 - 2.2413 0.82 8223 153 0.1546 0.1757 REMARK 3 8 2.2413 - 2.1437 0.83 8353 134 0.1588 0.2195 REMARK 3 9 2.1437 - 2.0612 0.82 8204 141 0.1697 0.2208 REMARK 3 10 2.0612 - 1.9901 0.81 8156 128 0.1862 0.2028 REMARK 3 11 1.9901 - 1.9278 0.82 8271 136 0.2001 0.2371 REMARK 3 12 1.9278 - 1.8727 0.83 8303 145 0.2199 0.2590 REMARK 3 13 1.8727 - 1.8234 0.83 8389 151 0.2349 0.2724 REMARK 3 14 1.8234 - 1.7790 0.83 8291 152 0.2571 0.3213 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.5300 REMARK 3 OPERATOR: -H,-K,L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4176 REMARK 3 ANGLE : 0.851 5703 REMARK 3 CHIRALITY : 0.052 647 REMARK 3 PLANARITY : 0.006 759 REMARK 3 DIHEDRAL : 9.278 3420 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 19 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5090 41.0392 -13.3312 REMARK 3 T TENSOR REMARK 3 T11: 0.1960 T22: 0.1874 REMARK 3 T33: 0.1151 T12: -0.0446 REMARK 3 T13: -0.0323 T23: -0.0366 REMARK 3 L TENSOR REMARK 3 L11: 2.3158 L22: 0.8539 REMARK 3 L33: 1.5954 L12: -0.9402 REMARK 3 L13: -0.0758 L23: 0.1555 REMARK 3 S TENSOR REMARK 3 S11: 0.1371 S12: 0.0484 S13: -0.2038 REMARK 3 S21: -0.2101 S22: 0.0005 S23: 0.0682 REMARK 3 S31: 0.2030 S32: -0.0498 S33: -0.1192 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6014 33.3753 8.0028 REMARK 3 T TENSOR REMARK 3 T11: 0.1581 T22: 0.1201 REMARK 3 T33: 0.1292 T12: 0.0139 REMARK 3 T13: 0.0033 T23: 0.0080 REMARK 3 L TENSOR REMARK 3 L11: 2.1060 L22: 1.1601 REMARK 3 L33: 0.8515 L12: 0.6576 REMARK 3 L13: 0.0898 L23: 0.0256 REMARK 3 S TENSOR REMARK 3 S11: 0.0015 S12: 0.0263 S13: -0.1394 REMARK 3 S21: 0.0811 S22: 0.0200 S23: -0.0320 REMARK 3 S31: 0.1153 S32: 0.0414 S33: -0.0062 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2186 38.8756 14.8851 REMARK 3 T TENSOR REMARK 3 T11: 0.1395 T22: 0.1560 REMARK 3 T33: 0.1105 T12: -0.0278 REMARK 3 T13: 0.0052 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 0.8896 L22: 0.5889 REMARK 3 L33: 1.1570 L12: -0.2275 REMARK 3 L13: -0.3448 L23: 0.1029 REMARK 3 S TENSOR REMARK 3 S11: -0.0399 S12: -0.0436 S13: -0.0544 REMARK 3 S21: -0.0031 S22: 0.0129 S23: 0.0269 REMARK 3 S31: 0.1137 S32: -0.1039 S33: 0.0305 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 190 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.9098 43.7674 0.8344 REMARK 3 T TENSOR REMARK 3 T11: 0.1193 T22: 0.1307 REMARK 3 T33: 0.0838 T12: -0.0208 REMARK 3 T13: 0.0135 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 0.6697 L22: 0.4856 REMARK 3 L33: 0.7385 L12: 0.1236 REMARK 3 L13: 0.1705 L23: -0.2001 REMARK 3 S TENSOR REMARK 3 S11: -0.0631 S12: 0.0225 S13: -0.0626 REMARK 3 S21: -0.0471 S22: 0.0474 S23: 0.0056 REMARK 3 S31: 0.0935 S32: -0.0318 S33: 0.0264 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 256 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4528 54.1192 11.8451 REMARK 3 T TENSOR REMARK 3 T11: 0.1077 T22: 0.1345 REMARK 3 T33: 0.0696 T12: -0.0048 REMARK 3 T13: -0.0032 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.6526 L22: 1.5287 REMARK 3 L33: 0.4673 L12: -0.3397 REMARK 3 L13: -0.2292 L23: 0.1943 REMARK 3 S TENSOR REMARK 3 S11: -0.0271 S12: -0.0434 S13: 0.0010 REMARK 3 S21: 0.0688 S22: 0.0075 S23: -0.0541 REMARK 3 S31: 0.0208 S32: -0.0001 S33: 0.0217 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 313 THROUGH 433 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1195 60.7275 -3.8436 REMARK 3 T TENSOR REMARK 3 T11: 0.1087 T22: 0.1246 REMARK 3 T33: 0.0625 T12: -0.0088 REMARK 3 T13: 0.0052 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.7748 L22: 0.6129 REMARK 3 L33: 0.6211 L12: 0.1011 REMARK 3 L13: 0.1150 L23: 0.0560 REMARK 3 S TENSOR REMARK 3 S11: -0.0089 S12: 0.0630 S13: 0.0467 REMARK 3 S21: -0.0475 S22: -0.0003 S23: 0.0471 REMARK 3 S31: -0.0216 S32: -0.0636 S33: 0.0097 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 434 THROUGH 499 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4228 65.9389 7.1917 REMARK 3 T TENSOR REMARK 3 T11: 0.1482 T22: 0.1780 REMARK 3 T33: 0.1394 T12: 0.0112 REMARK 3 T13: -0.0077 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.8206 L22: 0.1623 REMARK 3 L33: 0.7541 L12: 0.0487 REMARK 3 L13: -0.7405 L23: -0.0099 REMARK 3 S TENSOR REMARK 3 S11: 0.0098 S12: 0.0604 S13: 0.0601 REMARK 3 S21: 0.0299 S22: 0.0208 S23: 0.0347 REMARK 3 S31: -0.0269 S32: -0.1376 S33: -0.0407 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 500 THROUGH 553 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6686 59.2848 10.1881 REMARK 3 T TENSOR REMARK 3 T11: 0.1246 T22: 0.1592 REMARK 3 T33: 0.1007 T12: -0.0066 REMARK 3 T13: -0.0062 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 0.2067 L22: 0.2466 REMARK 3 L33: 0.1852 L12: 0.0390 REMARK 3 L13: -0.0389 L23: -0.0173 REMARK 3 S TENSOR REMARK 3 S11: -0.0063 S12: 0.0068 S13: 0.0668 REMARK 3 S21: -0.0014 S22: 0.0122 S23: 0.0995 REMARK 3 S31: -0.0676 S32: -0.0887 S33: 0.0377 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WM7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000229248. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70015 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.777 REMARK 200 RESOLUTION RANGE LOW (A) : 45.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 4.064 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.02 REMARK 200 R MERGE FOR SHELL (I) : 0.77700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.760 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5WM2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM CACODYLATE PH 6.5, 1.7 M REMARK 280 SODIUM ACETATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.66400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.33200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.33200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 58.66400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1006 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 GLY A 554 REMARK 465 GLN A 555 REMARK 465 LEU A 556 REMARK 465 ARG A 557 REMARK 465 THR A 558 REMARK 465 GLU A 559 REMARK 465 ASP A 560 REMARK 465 GLY A 561 REMARK 465 GLY A 562 REMARK 465 VAL A 563 REMARK 465 HIS A 564 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 542 CG CD CE NZ REMARK 470 LYS A 546 CG CD CE NZ REMARK 470 GLU A 547 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 224 OD2 ASP A 227 2.02 REMARK 500 O HOH A 908 O HOH A 1004 2.03 REMARK 500 O ASP A 151 O HOH A 701 2.05 REMARK 500 O HOH A 853 O HOH A 994 2.08 REMARK 500 O HOH A 862 O HOH A 975 2.08 REMARK 500 OD2 ASP A 66 O HOH A 702 2.09 REMARK 500 O HOH A 885 O HOH A 1005 2.09 REMARK 500 O HOH A 955 O HOH A 1065 2.10 REMARK 500 OE2 GLU A 43 NH2 ARG A 45 2.11 REMARK 500 O HOH A 739 O HOH A 830 2.13 REMARK 500 O HOH A 847 O HOH A 1018 2.13 REMARK 500 O HOH A 950 O HOH A 1067 2.14 REMARK 500 O HOH A 941 O HOH A 1042 2.14 REMARK 500 O HOH A 780 O HOH A 1050 2.14 REMARK 500 N GLY A 212 O HOH A 703 2.15 REMARK 500 N HIS A 158 O HOH A 701 2.15 REMARK 500 O HOH A 777 O HOH A 920 2.15 REMARK 500 OD2 ASP A 242 O HOH A 704 2.15 REMARK 500 OD2 ASP A 478 O HOH A 705 2.16 REMARK 500 O HOH A 787 O HOH A 1042 2.19 REMARK 500 O HOH A 909 O HOH A 949 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 981 O HOH A 1070 6555 2.12 REMARK 500 O HOH A 858 O HOH A 980 6554 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 95 62.69 39.66 REMARK 500 ARG A 131 -159.92 -122.12 REMARK 500 ALA A 182 -129.75 61.31 REMARK 500 THR A 215 -169.97 -115.26 REMARK 500 ALA A 260 11.60 -145.57 REMARK 500 TYR A 408 13.48 -141.60 REMARK 500 VAL A 540 -33.01 113.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1085 DISTANCE = 6.35 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 603 DBREF1 5WM7 A 21 564 UNP A0A140DJY3_9ACTN DBREF2 5WM7 A A0A140DJY3 1 544 SEQADV 5WM7 MET A 1 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 GLY A 2 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 SER A 3 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 SER A 4 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 HIS A 5 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 HIS A 6 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 HIS A 7 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 HIS A 8 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 HIS A 9 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 HIS A 10 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 SER A 11 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 SER A 12 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 GLY A 13 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 LEU A 14 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 VAL A 15 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 PRO A 16 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 ARG A 17 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 GLY A 18 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 SER A 19 UNP A0A140DJY EXPRESSION TAG SEQADV 5WM7 HIS A 20 UNP A0A140DJY EXPRESSION TAG SEQRES 1 A 564 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 564 LEU VAL PRO ARG GLY SER HIS MET LEU ASP GLY TRP VAL SEQRES 3 A 564 PRO TRP PRO GLU SER PHE ALA ARG ARG TYR ARG ALA ALA SEQRES 4 A 564 GLY TYR TRP GLU GLY ARG PRO LEU ASP ARG LEU LEU ARG SEQRES 5 A 564 GLU ARG ALA ALA ALA ASP PRO ASP ARG ILE ALA LEU VAL SEQRES 6 A 564 ASP ALA ALA GLY ASP ARG TRP THR TYR ALA GLU LEU ASP SEQRES 7 A 564 ARG HIS ALA ASP ARG GLN ALA ALA GLY LEU ARG ARG LEU SEQRES 8 A 564 GLY ILE GLY ALA GLY ASP ARG VAL VAL VAL GLN LEU PRO SEQRES 9 A 564 ASN THR ASP ALA PHE VAL VAL LEU PHE PHE ALA LEU LEU SEQRES 10 A 564 ARG ALA GLY ALA VAL PRO VAL LEU THR LEU PRO ALA HIS SEQRES 11 A 564 ARG GLU SER GLU ILE VAL HIS VAL ALA GLU THR ALA GLY SEQRES 12 A 564 ALA THR ALA TYR VAL ILE PRO ASP VAL LEU ASP GLY PHE SEQRES 13 A 564 ASP HIS ARG ALA LEU ALA ARG ALA ALA ARG LYS ALA VAL SEQRES 14 A 564 PRO SER ILE GLU HIS VAL LEU VAL ALA GLY GLU ALA ALA SEQRES 15 A 564 GLU PHE THR ALA LEU ALA ASP VAL ASP ALA ALA PRO VAL SEQRES 16 A 564 PRO LEU ALA GLU PRO ASP PRO GLY ASP VAL ALA LEU LEU SEQRES 17 A 564 LEU LEU SER GLY GLY THR THR GLY LYS PRO LYS LEU ILE SEQRES 18 A 564 PRO ARG THR HIS ASP ASP TYR THR TYR ASN VAL ARG ALA SEQRES 19 A 564 SER ALA GLU VAL CYS GLY PHE ASP SER ASP THR VAL TYR SEQRES 20 A 564 LEU VAL VAL LEU PRO THR ALA HIS ASN PHE ALA LEU ALA SEQRES 21 A 564 CYS PRO GLY LEU LEU GLY THR LEU MET VAL GLY GLY THR SEQRES 22 A 564 VAL VAL LEU ALA PRO THR PRO SER PRO GLU ASP ALA PHE SEQRES 23 A 564 GLU LEU ILE GLU ARG GLU LYS VAL THR ALA THR ALA VAL SEQRES 24 A 564 VAL PRO PRO VAL ALA LEU LEU TRP LEU ASP ALA VAL GLU SEQRES 25 A 564 TRP GLU ASP ALA ASP LEU SER SER LEU ARG LEU LEU GLN SEQRES 26 A 564 VAL GLY GLY SER LYS LEU GLY ALA GLU PRO ALA ALA ARG SEQRES 27 A 564 VAL ARG PRO ALA LEU GLY CYS THR LEU GLN GLN VAL PHE SEQRES 28 A 564 GLY MET ALA GLU GLY LEU LEU ASN TYR THR ARG LEU ASP SEQRES 29 A 564 ASP PRO SER ASP LEU VAL ILE GLN THR GLN GLY ARG PRO SEQRES 30 A 564 LEU SER PRO ASP ASP GLU ILE ARG VAL VAL ASP GLU ASP SEQRES 31 A 564 GLY ARG ASP VAL ALA PRO GLY GLU THR GLY GLU LEU LEU SEQRES 32 A 564 THR ARG GLY PRO TYR THR LEU ARG GLY TYR TYR ARG ALA SEQRES 33 A 564 PRO GLU HIS ASN ALA ARG THR PHE SER ASP ASP GLY PHE SEQRES 34 A 564 TYR ARG THR GLY ASP LEU VAL ARG VAL LEU PRO SER GLY SEQRES 35 A 564 HIS LEU VAL VAL GLU GLY ARG ALA LYS ASP GLN ILE ASN SEQRES 36 A 564 ARG GLY GLY ASP LYS ILE SER ALA GLU GLU LEU GLU ASN SEQRES 37 A 564 HIS ILE MET ALA HIS PRO GLY VAL HIS ASP ALA ALA VAL SEQRES 38 A 564 VAL GLY MET PRO ASP ALA THR MET GLY GLU ARG THR CYS SEQRES 39 A 564 ALA CYS LEU VAL PRO ARG ALA GLY ARG SER ALA PRO ALA SEQRES 40 A 564 GLN ARG GLU LEU ALA ALA PHE LEU THR ASP ARG GLY VAL SEQRES 41 A 564 ALA ALA TYR LYS LEU PRO ASP ARG VAL GLU VAL MET ASP SEQRES 42 A 564 ALA PHE PRO ARG THR SER VAL GLY LYS THR ASP LYS LYS SEQRES 43 A 564 GLU LEU GLY ARG ARG ILE ALA GLY GLN LEU ARG THR GLU SEQRES 44 A 564 ASP GLY GLY VAL HIS HET AMP A 601 23 HET GOL A 602 6 HET ACT A 603 4 HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM GOL GLYCEROL HETNAM ACT ACETATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 AMP C10 H14 N5 O7 P FORMUL 3 GOL C3 H8 O3 FORMUL 4 ACT C2 H3 O2 1- FORMUL 5 HOH *385(H2 O) HELIX 1 AA1 PRO A 29 ALA A 39 1 11 HELIX 2 AA2 ASP A 48 ASP A 58 1 11 HELIX 3 AA3 TYR A 74 LEU A 91 1 18 HELIX 4 AA4 THR A 106 GLY A 120 1 15 HELIX 5 AA5 ARG A 131 GLY A 143 1 13 HELIX 6 AA6 HIS A 158 VAL A 169 1 12 HELIX 7 AA7 ALA A 188 VAL A 190 5 3 HELIX 8 AA8 HIS A 225 CYS A 239 1 15 HELIX 9 AA9 HIS A 255 CYS A 261 1 7 HELIX 10 AB1 PRO A 262 GLY A 271 1 10 HELIX 11 AB2 SER A 281 LYS A 293 1 13 HELIX 12 AB3 VAL A 300 VAL A 311 1 12 HELIX 13 AB4 GLY A 332 ARG A 338 1 7 HELIX 14 AB5 ARG A 338 GLY A 344 1 7 HELIX 15 AB6 PRO A 366 THR A 373 1 8 HELIX 16 AB7 ALA A 416 PHE A 424 1 9 HELIX 17 AB8 ALA A 463 ALA A 472 1 10 HELIX 18 AB9 ALA A 507 GLY A 519 1 13 HELIX 19 AC1 ALA A 521 LEU A 525 5 5 HELIX 20 AC2 ASP A 544 ILE A 552 1 9 SHEET 1 AA1 9 ARG A 71 THR A 73 0 SHEET 2 AA1 9 ILE A 62 VAL A 65 -1 N LEU A 64 O TRP A 72 SHEET 3 AA1 9 THR A 273 LEU A 276 1 O VAL A 274 N ALA A 63 SHEET 4 AA1 9 VAL A 246 VAL A 249 1 N VAL A 249 O VAL A 275 SHEET 5 AA1 9 ALA A 296 VAL A 299 1 O ALA A 296 N LEU A 248 SHEET 6 AA1 9 LEU A 323 GLY A 327 1 O GLN A 325 N THR A 297 SHEET 7 AA1 9 THR A 346 MET A 353 1 O THR A 346 N LEU A 324 SHEET 8 AA1 9 GLY A 356 TYR A 360 -1 O ASN A 359 N PHE A 351 SHEET 9 AA1 9 ARG A 376 PRO A 377 -1 O ARG A 376 N TYR A 360 SHEET 1 AA2 5 VAL A 122 LEU A 125 0 SHEET 2 AA2 5 ARG A 98 VAL A 101 1 N VAL A 99 O VAL A 124 SHEET 3 AA2 5 ALA A 146 PRO A 150 1 O VAL A 148 N VAL A 100 SHEET 4 AA2 5 HIS A 174 ALA A 178 1 O ALA A 178 N ILE A 149 SHEET 5 AA2 5 THR A 185 ALA A 186 1 O THR A 185 N VAL A 177 SHEET 1 AA3 2 VAL A 152 LEU A 153 0 SHEET 2 AA3 2 PHE A 156 ASP A 157 -1 O PHE A 156 N LEU A 153 SHEET 1 AA4 2 VAL A 205 SER A 211 0 SHEET 2 AA4 2 LYS A 219 THR A 224 -1 O ARG A 223 N ALA A 206 SHEET 1 AA5 4 GLU A 383 VAL A 387 0 SHEET 2 AA5 4 GLY A 400 ARG A 405 -1 O ARG A 405 N GLU A 383 SHEET 3 AA5 4 TYR A 430 VAL A 438 -1 O TYR A 430 N THR A 404 SHEET 4 AA5 4 LEU A 444 ARG A 449 -1 O GLU A 447 N LEU A 435 SHEET 1 AA6 2 GLN A 453 ARG A 456 0 SHEET 2 AA6 2 ASP A 459 SER A 462 -1 O ASP A 459 N ARG A 456 SHEET 1 AA7 3 VAL A 476 ASP A 486 0 SHEET 2 AA7 3 GLY A 490 PRO A 499 -1 O VAL A 498 N HIS A 477 SHEET 3 AA7 3 ARG A 528 VAL A 531 1 O GLU A 530 N LEU A 497 CISPEP 1 CYS A 261 PRO A 262 0 -4.95 SITE 1 AC1 16 GLY A 328 SER A 329 LYS A 330 VAL A 350 SITE 2 AC1 16 PHE A 351 GLY A 352 MET A 353 ALA A 354 SITE 3 AC1 16 ASP A 434 LYS A 451 LYS A 460 GOL A 602 SITE 4 AC1 16 HOH A 777 HOH A 795 HOH A 833 HOH A 867 SITE 1 AC2 8 HIS A 255 ASN A 256 GLY A 328 VAL A 350 SITE 2 AC2 8 GLY A 352 MET A 353 ALA A 354 AMP A 601 SITE 1 AC3 7 CYS A 239 PHE A 241 THR A 245 THR A 295 SITE 2 AC3 7 ARG A 322 ARG A 509 HOH A1010 CRYST1 121.916 121.916 87.996 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008202 0.004736 0.000000 0.00000 SCALE2 0.000000 0.009471 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011364 0.00000