HEADER TRANSFERASE 03-AUG-17 5WOY TITLE NMR SOLUTION STRUCTURE OF ENZYME I (NEIT) PROTEIN USING TWO 4D-SPECTRA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PEP-UTILIZERS RESIDUES 1-248; COMPND 5 SYNONYM: PHOSPHOTRANSFERASE SYSTEM,ENZYME I; COMPND 6 EC: 2.7.3.9; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CALDANAEROBACTER SUBTERRANEUS SUBSP. SOURCE 3 TENGCONGENSIS (STRAIN DSM 15242 / JCM 11007 / NBRC 100824 / MB4); SOURCE 4 ORGANISM_TAXID: 273068; SOURCE 5 STRAIN: DSM 15242 / JCM 11007 / NBRC 100824 / MB4; SOURCE 6 GENE: PTSA, TTE2334; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR T.EVANGELIDIS,S.NERLI,N.G.SGOURAKIS,K.TRIPSIANES REVDAT 3 15-MAY-24 5WOY 1 REMARK REVDAT 2 14-JUN-23 5WOY 1 REMARK REVDAT 1 07-FEB-18 5WOY 0 JRNL AUTH T.EVANGELIDIS,S.NERLI,J.NOVACEK,A.E.BRERETON,P.A.KARPLUS, JRNL AUTH 2 R.R.DOTAS,V.VENDITTI,N.G.SGOURAKIS,K.TRIPSIANES JRNL TITL AUTOMATED NMR RESONANCE ASSIGNMENTS AND STRUCTURE JRNL TITL 2 DETERMINATION USING A MINIMAL SET OF 4D SPECTRA. JRNL REF NAT COMMUN V. 9 384 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 29374165 JRNL DOI 10.1038/S41467-017-02592-Z REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CS-ROSETTA REMARK 3 AUTHORS : SHEN, VERNON, BAKER AND BAX REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WOY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000228864. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.8 MM [U-13C; U-15N] ENZYME I REMARK 210 (NEIT) PROTEIN, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 4D HC(CC TOCSY(CO))NH; 4D REMARK 210 13C,15N EDITED HMQC-NOESY-HSQC; REMARK 210 4D 13C,13C EDITED HMQC-NOESY-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 850 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : 4D-CHAINS, CS-ROSETTA, SPARKY REMARK 210 METHOD USED : NA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 6 87.23 -67.54 REMARK 500 1 GLU A 155 104.10 -57.99 REMARK 500 1 ASN A 207 31.74 -143.95 REMARK 500 2 GLU A 29 -98.90 -102.54 REMARK 500 2 VAL A 183 138.87 -172.73 REMARK 500 3 ALA A 6 87.52 -68.53 REMARK 500 3 PHE A 65 -58.62 -123.12 REMARK 500 3 ASP A 162 110.95 -161.70 REMARK 500 3 THR A 170 42.87 -95.95 REMARK 500 3 ASN A 207 45.07 -152.06 REMARK 500 4 ALA A 6 87.93 -68.31 REMARK 500 4 LEU A 163 118.91 -173.61 REMARK 500 4 LYS A 172 74.81 -67.35 REMARK 500 5 ALA A 6 87.44 -68.83 REMARK 500 5 ARG A 186 62.22 -118.00 REMARK 500 5 ASN A 207 45.06 -151.94 REMARK 500 6 ALA A 6 87.48 -67.56 REMARK 500 6 TYR A 19 106.97 -59.66 REMARK 500 6 ASP A 182 -0.82 -152.10 REMARK 500 6 ASN A 207 27.48 -161.31 REMARK 500 7 ASN A 207 42.71 -152.36 REMARK 500 8 ALA A 6 88.09 -68.72 REMARK 500 8 LYS A 172 88.41 -68.63 REMARK 500 9 ALA A 6 87.86 -67.76 REMARK 500 9 MET A 171 94.25 -57.29 REMARK 500 9 LYS A 172 105.41 -41.73 REMARK 500 10 ALA A 6 87.79 -68.50 REMARK 500 10 LYS A 30 140.26 124.90 REMARK 500 10 LYS A 172 77.26 -67.55 REMARK 500 10 ASN A 207 44.33 -141.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30326 RELATED DB: BMRB REMARK 900 NMR SOLUTION STRUCTURE OF ENZYME I (NEIT) PROTEIN USING TWO 4D- REMARK 900 SPECTRA DBREF 5WOY A 1 248 UNP Q8R7R4 Q8R7R4_CALS4 1 248 SEQRES 1 A 248 MET LEU LYS GLY VAL ALA ALA SER PRO GLY ILE ALA ILE SEQRES 2 A 248 GLY LYS ALA PHE LEU TYR THR LYS GLU LYS VAL THR ILE SEQRES 3 A 248 ASN VAL GLU LYS ILE GLU GLU SER LYS VAL GLU GLU GLU SEQRES 4 A 248 ILE ALA LYS PHE ARG LYS ALA LEU GLU VAL THR GLN GLU SEQRES 5 A 248 GLU ILE GLU LYS ILE LYS GLU LYS ALA LEU LYS GLU PHE SEQRES 6 A 248 GLY LYS GLU LYS ALA GLU ILE PHE GLU ALA HIS LEU MET SEQRES 7 A 248 LEU ALA SER ASP PRO GLU LEU ILE GLU GLY VAL GLU ASN SEQRES 8 A 248 MET ILE LYS THR GLU LEU VAL THR ALA ASP ASN ALA VAL SEQRES 9 A 248 ASN LYS VAL ILE GLU GLN ASN ALA SER VAL MET GLU SER SEQRES 10 A 248 LEU ASN ASP GLU TYR LEU LYS GLU ARG ALA VAL ASP LEU SEQRES 11 A 248 ARG ASP VAL GLY ASN ARG ILE ILE GLU ASN LEU LEU GLY SEQRES 12 A 248 VAL LYS SER VAL ASN LEU SER ASP LEU GLU GLU GLU VAL SEQRES 13 A 248 VAL VAL ILE ALA ARG ASP LEU THR PRO SER ASP THR ALA SEQRES 14 A 248 THR MET LYS LYS GLU MET VAL LEU GLY PHE ALA THR ASP SEQRES 15 A 248 VAL GLY GLY ARG THR SER HIS THR ALA ILE MET ALA ARG SEQRES 16 A 248 SER LEU GLU ILE PRO ALA VAL VAL GLY LEU GLY ASN VAL SEQRES 17 A 248 THR SER GLN VAL LYS ALA GLY ASP LEU VAL ILE VAL ASP SEQRES 18 A 248 GLY LEU GLU GLY ILE VAL ILE VAL ASN PRO ASP GLU LYS SEQRES 19 A 248 THR VAL GLU ASP TYR LYS SER LYS LYS GLU SER TYR GLU SEQRES 20 A 248 LYS HELIX 1 AA1 GLU A 32 SER A 34 5 3 HELIX 2 AA2 LYS A 35 PHE A 65 1 31 HELIX 3 AA3 GLY A 66 SER A 81 1 16 HELIX 4 AA4 ASP A 82 LEU A 97 1 16 HELIX 5 AA5 THR A 99 LEU A 118 1 20 HELIX 6 AA6 ASP A 120 GLY A 143 1 24 HELIX 7 AA7 ASN A 148 LEU A 152 5 5 HELIX 8 AA8 THR A 164 ALA A 169 1 6 HELIX 9 AA9 ARG A 186 LEU A 197 1 12 HELIX 10 AB1 ASN A 207 VAL A 212 1 6 HELIX 11 AB2 ASP A 232 LYS A 248 1 17 SHEET 1 AA1 8 LEU A 2 LYS A 3 0 SHEET 2 AA1 8 ILE A 226 VAL A 229 -1 O VAL A 227 N LEU A 2 SHEET 3 AA1 8 LEU A 217 ASP A 221 -1 N ILE A 219 O ILE A 228 SHEET 4 AA1 8 ILE A 11 TYR A 19 -1 N ALA A 12 O VAL A 220 SHEET 5 AA1 8 VAL A 156 ALA A 160 1 O ILE A 159 N PHE A 17 SHEET 6 AA1 8 VAL A 176 ALA A 180 1 O LEU A 177 N VAL A 156 SHEET 7 AA1 8 ALA A 201 VAL A 203 1 O VAL A 202 N PHE A 179 SHEET 8 AA1 8 VAL A 5 ALA A 6 -1 N VAL A 5 O VAL A 203 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1