HEADER TRANSFERASE 04-AUG-17 5WPI TITLE THE VIRULENCE-ASSOCIATED PROTEIN HSVA FROM THE FIRE BLIGHT PATHOGEN TITLE 2 ERWINIA AMYLOVORA IS A POLYAMINE AMIDINOTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HSVA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ERWINIA AMYLOVORA; SOURCE 3 ORGANISM_COMMON: FIRE BLIGHT BACTERIA; SOURCE 4 ORGANISM_TAXID: 552; SOURCE 5 GENE: HSVA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMIDINOTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.SHANKER,J.LAWTON REVDAT 4 13-MAR-24 5WPI 1 REMARK REVDAT 3 10-JAN-18 5WPI 1 JRNL REVDAT 2 22-NOV-17 5WPI 1 JRNL REVDAT 1 15-NOV-17 5WPI 0 JRNL AUTH S.SHANKER,G.K.SCHAEFER,B.K.BARNHART,V.L.WALLACE-KNEALE, JRNL AUTH 2 D.CHANG,T.J.COYLE,D.A.METZLER,J.HUANG,J.A.LAWTON JRNL TITL THE VIRULENCE-ASSOCIATED PROTEIN HSVA FROM THE FIRE BLIGHT JRNL TITL 2 PATHOGEN ERWINIA AMYLOVORA IS A POLYAMINE JRNL TITL 3 AMIDINOTRANSFERASE. JRNL REF J. BIOL. CHEM. V. 292 21366 2017 JRNL REFN ESSN 1083-351X JRNL PMID 29123034 JRNL DOI 10.1074/JBC.M117.815951 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 38762 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1942 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.0384 - 5.5381 1.00 2760 146 0.1436 0.1846 REMARK 3 2 5.5381 - 4.3978 1.00 2697 127 0.1181 0.1389 REMARK 3 3 4.3978 - 3.8425 1.00 2629 153 0.1258 0.1738 REMARK 3 4 3.8425 - 3.4915 1.00 2644 145 0.1536 0.2108 REMARK 3 5 3.4915 - 3.2414 1.00 2625 130 0.1928 0.2499 REMARK 3 6 3.2414 - 3.0503 1.00 2619 145 0.2042 0.2917 REMARK 3 7 3.0503 - 2.8976 1.00 2623 139 0.2192 0.2734 REMARK 3 8 2.8976 - 2.7715 1.00 2605 126 0.2173 0.2914 REMARK 3 9 2.7715 - 2.6649 1.00 2594 152 0.2224 0.3216 REMARK 3 10 2.6649 - 2.5729 1.00 2629 121 0.2157 0.2759 REMARK 3 11 2.5729 - 2.4925 1.00 2583 146 0.2137 0.2966 REMARK 3 12 2.4925 - 2.4213 1.00 2619 126 0.2157 0.2794 REMARK 3 13 2.4213 - 2.3575 1.00 2581 150 0.2183 0.2754 REMARK 3 14 2.3575 - 2.3000 1.00 2612 136 0.2331 0.2840 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6157 REMARK 3 ANGLE : 0.879 8371 REMARK 3 CHIRALITY : 0.053 876 REMARK 3 PLANARITY : 0.006 1088 REMARK 3 DIHEDRAL : 3.120 3652 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.2043 59.4394 33.0568 REMARK 3 T TENSOR REMARK 3 T11: 0.2837 T22: 0.3391 REMARK 3 T33: 0.3237 T12: 0.0575 REMARK 3 T13: 0.0032 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 0.8042 L22: 0.3011 REMARK 3 L33: 1.9008 L12: -0.0738 REMARK 3 L13: 0.3655 L23: 0.1550 REMARK 3 S TENSOR REMARK 3 S11: 0.0529 S12: -0.1235 S13: -0.0802 REMARK 3 S21: 0.0852 S22: 0.0510 S23: -0.0465 REMARK 3 S31: 0.2522 S32: 0.0105 S33: -0.1126 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.7992 58.9193 17.3183 REMARK 3 T TENSOR REMARK 3 T11: 0.2756 T22: 0.4692 REMARK 3 T33: 0.3361 T12: 0.1120 REMARK 3 T13: 0.0067 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 2.6084 L22: 2.1291 REMARK 3 L33: 2.7993 L12: 1.5228 REMARK 3 L13: 1.2865 L23: 0.8727 REMARK 3 S TENSOR REMARK 3 S11: 0.0047 S12: 0.1874 S13: -0.1530 REMARK 3 S21: 0.0208 S22: 0.1261 S23: -0.3248 REMARK 3 S31: 0.3135 S32: 0.5043 S33: -0.1475 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 221 THROUGH 366 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.2998 60.0407 33.1776 REMARK 3 T TENSOR REMARK 3 T11: 0.2993 T22: 0.4982 REMARK 3 T33: 0.3627 T12: 0.1044 REMARK 3 T13: 0.0020 T23: -0.0435 REMARK 3 L TENSOR REMARK 3 L11: 0.9753 L22: 0.4823 REMARK 3 L33: 1.9919 L12: -0.1813 REMARK 3 L13: 0.6359 L23: -0.7229 REMARK 3 S TENSOR REMARK 3 S11: -0.0113 S12: -0.0100 S13: -0.0062 REMARK 3 S21: 0.0287 S22: -0.0312 S23: -0.1080 REMARK 3 S31: 0.1463 S32: 0.5130 S33: 0.0596 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.3954 71.1338 13.3928 REMARK 3 T TENSOR REMARK 3 T11: 0.2629 T22: 0.3012 REMARK 3 T33: 0.2985 T12: 0.0203 REMARK 3 T13: -0.0063 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 0.5386 L22: 0.6354 REMARK 3 L33: 1.5247 L12: -0.3129 REMARK 3 L13: 0.1924 L23: -0.2885 REMARK 3 S TENSOR REMARK 3 S11: -0.0010 S12: 0.0181 S13: -0.0421 REMARK 3 S21: -0.1173 S22: 0.0445 S23: 0.0919 REMARK 3 S31: 0.0679 S32: -0.2111 S33: -0.0607 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 173 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.1651 77.3661 30.0038 REMARK 3 T TENSOR REMARK 3 T11: 0.2865 T22: 0.4965 REMARK 3 T33: 0.3139 T12: 0.1047 REMARK 3 T13: 0.0163 T23: -0.0615 REMARK 3 L TENSOR REMARK 3 L11: 1.6068 L22: 3.9642 REMARK 3 L33: 2.3368 L12: 1.3733 REMARK 3 L13: -0.3369 L23: -1.0148 REMARK 3 S TENSOR REMARK 3 S11: 0.0057 S12: -0.3685 S13: 0.1651 REMARK 3 S21: 0.1844 S22: -0.0522 S23: 0.3892 REMARK 3 S31: -0.1504 S32: -0.4815 S33: 0.0051 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 221 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0436 84.3194 27.2772 REMARK 3 T TENSOR REMARK 3 T11: 0.3353 T22: 0.3983 REMARK 3 T33: 0.3208 T12: 0.1053 REMARK 3 T13: 0.0141 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 0.6027 L22: 3.8977 REMARK 3 L33: 3.5059 L12: -1.1827 REMARK 3 L13: 0.7478 L23: -0.4612 REMARK 3 S TENSOR REMARK 3 S11: -0.0519 S12: -0.1744 S13: -0.0556 REMARK 3 S21: 0.1151 S22: 0.1881 S23: 0.3430 REMARK 3 S31: -0.6498 S32: -0.5777 S33: -0.0921 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 254 THROUGH 366 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0745 89.5411 11.6214 REMARK 3 T TENSOR REMARK 3 T11: 0.3692 T22: 0.4039 REMARK 3 T33: 0.3567 T12: 0.1537 REMARK 3 T13: 0.0122 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 2.4262 L22: 2.7100 REMARK 3 L33: 2.3676 L12: 0.0914 REMARK 3 L13: 0.4032 L23: 0.3007 REMARK 3 S TENSOR REMARK 3 S11: -0.0763 S12: -0.1648 S13: 0.1445 REMARK 3 S21: 0.0666 S22: 0.0701 S23: 0.3471 REMARK 3 S31: -0.4564 S32: -0.5637 S33: 0.0324 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WPI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000229339. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38767 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 38.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.930 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.88 REMARK 200 R MERGE FOR SHELL (I) : 0.51700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, 0.1 M HEPES PH 7.5, AND REMARK 280 30% (W/V) PEG 400, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.48600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.74300 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.74300 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 61.48600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 MET B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 GLN B -2 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 13 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 GLU A 70 CG CD OE1 OE2 REMARK 470 GLU A 183 CG CD OE1 OE2 REMARK 470 GLU A 185 CG CD OE1 OE2 REMARK 470 ARG A 189 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 277 CG CD CE NZ REMARK 470 LYS A 312 CG CD CE NZ REMARK 470 LYS B 178 CG CD CE NZ REMARK 470 GLU B 183 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 577 O HOH B 642 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 19 106.57 -166.66 REMARK 500 ASP A 36 -159.22 -114.22 REMARK 500 ASP A 37 76.18 -67.50 REMARK 500 HIS A 102 71.14 -118.40 REMARK 500 THR A 115 -160.17 -105.41 REMARK 500 PHE A 116 -88.37 -121.22 REMARK 500 MET A 120 74.48 -118.86 REMARK 500 GLU A 194 32.23 -99.69 REMARK 500 MET A 248 -71.34 -119.71 REMARK 500 ASN A 265 98.90 -63.51 REMARK 500 MET A 297 40.06 -141.61 REMARK 500 PHE A 339 6.55 -153.01 REMARK 500 SER A 348 -166.28 -122.40 REMARK 500 HIS B 13 30.85 -82.75 REMARK 500 GLU B 19 105.58 -160.29 REMARK 500 ASP B 36 -159.99 -92.62 REMARK 500 THR B 115 -156.92 -102.29 REMARK 500 PHE B 116 -85.84 -123.04 REMARK 500 ALA B 202 4.47 -69.50 REMARK 500 VAL B 269 73.69 -117.37 REMARK 500 MET B 297 48.65 -142.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 402 DBREF 5WPI A 1 366 UNP Q58PW8 Q58PW8_ERWAM 1 366 DBREF 5WPI B 1 366 UNP Q58PW8 Q58PW8_ERWAM 1 366 SEQADV 5WPI MET A -20 UNP Q58PW8 INITIATING METHIONINE SEQADV 5WPI GLY A -19 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI SER A -18 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI SER A -17 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS A -16 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS A -15 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS A -14 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS A -13 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS A -12 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS A -11 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI SER A -10 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI SER A -9 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI GLY A -8 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI GLU A -7 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI ASN A -6 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI LEU A -5 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI TYR A -4 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI PHE A -3 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI GLN A -2 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI GLY A -1 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS A 0 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI MET B -20 UNP Q58PW8 INITIATING METHIONINE SEQADV 5WPI GLY B -19 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI SER B -18 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI SER B -17 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS B -16 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS B -15 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS B -14 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS B -13 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS B -12 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS B -11 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI SER B -10 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI SER B -9 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI GLY B -8 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI GLU B -7 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI ASN B -6 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI LEU B -5 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI TYR B -4 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI PHE B -3 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI GLN B -2 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI GLY B -1 UNP Q58PW8 EXPRESSION TAG SEQADV 5WPI HIS B 0 UNP Q58PW8 EXPRESSION TAG SEQRES 1 A 387 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 387 GLU ASN LEU TYR PHE GLN GLY HIS MET HIS TYR GLN LYS SEQRES 3 A 387 GLU GLU PRO SER TYR PHE SER HIS SER PRO SER PRO VAL SEQRES 4 A 387 GLU VAL TYR THR GLU TRP ASP PRO LEU GLU GLU VAL ILE SEQRES 5 A 387 VAL GLY ILE MET ASP ASP ILE ARG VAL PRO ASP TRP ASP SEQRES 6 A 387 LYS SER LEU LYS ALA ILE ILE PRO GLU GLU ASN HIS ASP SEQRES 7 A 387 PHE PHE GLN THR TYR SER GLY LYS ARG PHE PRO GLU GLU SEQRES 8 A 387 LEU LEU ILE LYS ALA ARG GLN GLU VAL GLU THR LEU ALA SEQRES 9 A 387 GLN ILE LEU GLN ALA GLU GLY ILE ARG VAL LYS ARG PRO SEQRES 10 A 387 ASN GLU SER ASN HIS HIS GLN PRO ILE MET THR PRO HIS SEQRES 11 A 387 PHE THR THR GLY GLY THR PHE TYR SER ALA MET PRO ARG SEQRES 12 A 387 ASP CYS LEU PHE ALA ILE GLY LYS LYS ILE ILE GLU VAL SEQRES 13 A 387 PRO MET SER TRP ARG SER ARG TYR PHE GLU THR PHE ALA SEQRES 14 A 387 PHE ARG ASP ILE LEU ASN ASP TYR PHE THR ARG GLY ALA SEQRES 15 A 387 GLU TRP ILE ALA ALA PRO LYS PRO MET LEU SER ASP ASP SEQRES 16 A 387 VAL TRP GLU LYS ASP PHE ASP PHE GLU GLN GLU PHE PRO SEQRES 17 A 387 PHE ARG SER ILE ILE THR GLU VAL GLU PRO LEU PHE ASP SEQRES 18 A 387 ALA ALA ASP PHE MET LYS MET GLY ARG ASP ILE ILE GLY SEQRES 19 A 387 GLN ARG SER HIS ALA THR ASN LYS LYS GLY ILE GLU TRP SEQRES 20 A 387 LEU ARG ARG THR LEU GLY PRO ASP TYR HIS ILE HIS ILE SEQRES 21 A 387 TYR GLU PHE ASP GLU PRO ALA PRO MET HIS ILE ASP THR SEQRES 22 A 387 THR ILE LEU PRO LEU ALA PRO GLY ARG VAL LEU ILE ASN SEQRES 23 A 387 LYS GLY TRP VAL PRO GLN ILE PRO ASP ILE PHE LYS ASP SEQRES 24 A 387 TRP GLU ILE LEU ASN PRO PRO ALA SER ASN LEU PRO ASP SEQRES 25 A 387 ASP HIS PRO LEU TYR MET SER SER ASN TRP ILE HIS THR SEQRES 26 A 387 ASN VAL LEU MET LEU ASP GLU LYS THR VAL ILE VAL GLU SEQRES 27 A 387 GLU ASP GLU GLU ALA LEU ILE SER ALA PHE ARG GLN TRP SEQRES 28 A 387 GLY PHE LYS THR ILE LEU CYS PRO PHE LYS HIS PHE GLN SEQRES 29 A 387 THR PHE GLY GLY SER PHE HIS CYS ALA THR LEU ASP VAL SEQRES 30 A 387 LYS ARG SER GLY SER LEU LYS SER TYR ILE SEQRES 1 B 387 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 387 GLU ASN LEU TYR PHE GLN GLY HIS MET HIS TYR GLN LYS SEQRES 3 B 387 GLU GLU PRO SER TYR PHE SER HIS SER PRO SER PRO VAL SEQRES 4 B 387 GLU VAL TYR THR GLU TRP ASP PRO LEU GLU GLU VAL ILE SEQRES 5 B 387 VAL GLY ILE MET ASP ASP ILE ARG VAL PRO ASP TRP ASP SEQRES 6 B 387 LYS SER LEU LYS ALA ILE ILE PRO GLU GLU ASN HIS ASP SEQRES 7 B 387 PHE PHE GLN THR TYR SER GLY LYS ARG PHE PRO GLU GLU SEQRES 8 B 387 LEU LEU ILE LYS ALA ARG GLN GLU VAL GLU THR LEU ALA SEQRES 9 B 387 GLN ILE LEU GLN ALA GLU GLY ILE ARG VAL LYS ARG PRO SEQRES 10 B 387 ASN GLU SER ASN HIS HIS GLN PRO ILE MET THR PRO HIS SEQRES 11 B 387 PHE THR THR GLY GLY THR PHE TYR SER ALA MET PRO ARG SEQRES 12 B 387 ASP CYS LEU PHE ALA ILE GLY LYS LYS ILE ILE GLU VAL SEQRES 13 B 387 PRO MET SER TRP ARG SER ARG TYR PHE GLU THR PHE ALA SEQRES 14 B 387 PHE ARG ASP ILE LEU ASN ASP TYR PHE THR ARG GLY ALA SEQRES 15 B 387 GLU TRP ILE ALA ALA PRO LYS PRO MET LEU SER ASP ASP SEQRES 16 B 387 VAL TRP GLU LYS ASP PHE ASP PHE GLU GLN GLU PHE PRO SEQRES 17 B 387 PHE ARG SER ILE ILE THR GLU VAL GLU PRO LEU PHE ASP SEQRES 18 B 387 ALA ALA ASP PHE MET LYS MET GLY ARG ASP ILE ILE GLY SEQRES 19 B 387 GLN ARG SER HIS ALA THR ASN LYS LYS GLY ILE GLU TRP SEQRES 20 B 387 LEU ARG ARG THR LEU GLY PRO ASP TYR HIS ILE HIS ILE SEQRES 21 B 387 TYR GLU PHE ASP GLU PRO ALA PRO MET HIS ILE ASP THR SEQRES 22 B 387 THR ILE LEU PRO LEU ALA PRO GLY ARG VAL LEU ILE ASN SEQRES 23 B 387 LYS GLY TRP VAL PRO GLN ILE PRO ASP ILE PHE LYS ASP SEQRES 24 B 387 TRP GLU ILE LEU ASN PRO PRO ALA SER ASN LEU PRO ASP SEQRES 25 B 387 ASP HIS PRO LEU TYR MET SER SER ASN TRP ILE HIS THR SEQRES 26 B 387 ASN VAL LEU MET LEU ASP GLU LYS THR VAL ILE VAL GLU SEQRES 27 B 387 GLU ASP GLU GLU ALA LEU ILE SER ALA PHE ARG GLN TRP SEQRES 28 B 387 GLY PHE LYS THR ILE LEU CYS PRO PHE LYS HIS PHE GLN SEQRES 29 B 387 THR PHE GLY GLY SER PHE HIS CYS ALA THR LEU ASP VAL SEQRES 30 B 387 LYS ARG SER GLY SER LEU LYS SER TYR ILE HET EDO A 401 4 HET EDO B 401 4 HET EDO B 402 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 3(C2 H6 O2) FORMUL 6 HOH *282(H2 O) HELIX 1 AA1 ASP A 44 ILE A 51 1 8 HELIX 2 AA2 PRO A 52 GLU A 54 5 3 HELIX 3 AA3 ASN A 55 TYR A 62 1 8 HELIX 4 AA4 PRO A 68 GLU A 89 1 22 HELIX 5 AA5 MET A 120 CYS A 124 1 5 HELIX 6 AA6 TRP A 139 TYR A 143 5 5 HELIX 7 AA7 PHE A 144 ALA A 148 5 5 HELIX 8 AA8 PHE A 149 ARG A 159 1 11 HELIX 9 AA9 SER A 172 TRP A 176 5 5 HELIX 10 AB1 ASP A 200 ALA A 202 5 3 HELIX 11 AB2 ASN A 220 GLY A 232 1 13 HELIX 12 AB3 LYS A 266 VAL A 269 5 4 HELIX 13 AB4 PRO A 273 LYS A 277 5 5 HELIX 14 AB5 TRP A 301 ASN A 305 5 5 HELIX 15 AB6 GLU A 320 TRP A 330 1 11 HELIX 16 AB7 PHE A 339 PHE A 345 1 7 HELIX 17 AB8 ASP B 44 ILE B 51 1 8 HELIX 18 AB9 PRO B 52 GLU B 54 5 3 HELIX 19 AC1 ASN B 55 TYR B 62 1 8 HELIX 20 AC2 PRO B 68 GLU B 89 1 22 HELIX 21 AC3 MET B 120 CYS B 124 1 5 HELIX 22 AC4 TRP B 139 TYR B 143 5 5 HELIX 23 AC5 THR B 146 ALA B 148 5 3 HELIX 24 AC6 PHE B 149 ARG B 159 1 11 HELIX 25 AC7 SER B 172 TRP B 176 5 5 HELIX 26 AC8 ASP B 200 ALA B 202 5 3 HELIX 27 AC9 ASN B 220 GLY B 232 1 13 HELIX 28 AD1 PRO B 273 LYS B 277 5 5 HELIX 29 AD2 TRP B 301 ASN B 305 5 5 HELIX 30 AD3 GLU B 320 TRP B 330 1 11 HELIX 31 AD4 PHE B 342 GLY B 346 5 5 SHEET 1 AA1 3 ARG A 92 LYS A 94 0 SHEET 2 AA1 3 LEU A 27 VAL A 32 1 N GLU A 28 O ARG A 92 SHEET 3 AA1 3 THR A 353 ARG A 358 -1 O LYS A 357 N GLU A 28 SHEET 1 AA2 2 ILE A 105 THR A 107 0 SHEET 2 AA2 2 PHE A 110 THR A 112 -1 O THR A 112 N ILE A 105 SHEET 1 AA3 3 LEU A 125 ILE A 128 0 SHEET 2 AA3 3 LYS A 131 GLU A 134 -1 O ILE A 133 N PHE A 126 SHEET 3 AA3 3 GLU A 162 ALA A 165 1 O GLU A 162 N ILE A 132 SHEET 1 AA4 3 PHE A 204 MET A 207 0 SHEET 2 AA4 3 ASP A 210 GLY A 213 -1 O ILE A 212 N MET A 205 SHEET 3 AA4 3 HIS A 236 ILE A 239 1 O HIS A 238 N ILE A 211 SHEET 1 AA5 3 ILE A 254 ALA A 258 0 SHEET 2 AA5 3 ARG A 261 ILE A 264 -1 O LEU A 263 N LEU A 255 SHEET 3 AA5 3 GLU A 280 LEU A 282 1 O LEU A 282 N ILE A 264 SHEET 1 AA6 3 LEU A 307 ASP A 310 0 SHEET 2 AA6 3 THR A 313 GLU A 317 -1 O THR A 313 N LEU A 309 SHEET 3 AA6 3 LYS A 333 CYS A 337 1 O ILE A 335 N VAL A 314 SHEET 1 AA7 3 ARG B 92 LYS B 94 0 SHEET 2 AA7 3 LEU B 27 VAL B 32 1 N VAL B 32 O LYS B 94 SHEET 3 AA7 3 THR B 353 ARG B 358 -1 O LYS B 357 N GLU B 28 SHEET 1 AA8 2 ILE B 105 MET B 106 0 SHEET 2 AA8 2 THR B 111 THR B 112 -1 O THR B 112 N ILE B 105 SHEET 1 AA9 3 LEU B 125 ILE B 128 0 SHEET 2 AA9 3 LYS B 131 GLU B 134 -1 O ILE B 133 N PHE B 126 SHEET 3 AA9 3 GLU B 162 ALA B 165 1 O GLU B 162 N ILE B 132 SHEET 1 AB1 3 PHE B 204 MET B 207 0 SHEET 2 AB1 3 ASP B 210 GLY B 213 -1 O ILE B 212 N MET B 205 SHEET 3 AB1 3 HIS B 236 ILE B 239 1 O HIS B 238 N ILE B 211 SHEET 1 AB2 3 ILE B 254 ALA B 258 0 SHEET 2 AB2 3 ARG B 261 ILE B 264 -1 O LEU B 263 N LEU B 255 SHEET 3 AB2 3 GLU B 280 LEU B 282 1 O LEU B 282 N VAL B 262 SHEET 1 AB3 3 LEU B 307 ASP B 310 0 SHEET 2 AB3 3 THR B 313 GLU B 317 -1 O ILE B 315 N LEU B 307 SHEET 3 AB3 3 LYS B 333 CYS B 337 1 O ILE B 335 N VAL B 314 CISPEP 1 PHE A 186 PRO A 187 0 -4.26 CISPEP 2 PHE B 186 PRO B 187 0 5.19 SITE 1 AC1 5 TYR A 10 PHE A 11 GLY A 90 ARG A 92 SITE 2 AC1 5 LYS B 221 SITE 1 AC2 4 ARG A 228 HIS A 236 GLU B 6 SER B 9 SITE 1 AC3 3 GLU A 6 GLU A 7 HIS B 236 CRYST1 127.543 127.543 92.229 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007840 0.004527 0.000000 0.00000 SCALE2 0.000000 0.009053 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010843 0.00000