HEADER OXIDOREDUCTASE 27-NOV-16 5WQO TITLE CRYSTAL STRUCTURE OF A CARBONYL REDUCTASE FROM PSEUDOMONAS AERUGINOSA TITLE 2 PAO1 IN COMPLEX WITH NADP (CONDITION I) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CARBONYL REDUCTASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 3 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 4 ORGANISM_TAXID: 208964; SOURCE 5 STRAIN: ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 SOURCE 6 / 1C / PRS 101 / PAO1; SOURCE 7 GENE: PA4079; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS SHORT CHAIN DEHYDROGENASE, REDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.LI,Y.WANG,M.BARTLAM REVDAT 2 08-NOV-23 5WQO 1 LINK REVDAT 1 04-OCT-17 5WQO 0 JRNL AUTH S.LI,X.TENG,L.SU,G.MAO,Y.XU,T.LI,R.LIU,Q.ZHANG,Y.WANG, JRNL AUTH 2 M.BARTLAM JRNL TITL STRUCTURE AND CHARACTERIZATION OF A NAD(P)H-DEPENDENT JRNL TITL 2 CARBONYL REDUCTASE FROM PSEUDOMONAS AERUGINOSA PAO1. JRNL REF FEBS LETT. V. 591 1785 2017 JRNL REFN ISSN 1873-3468 JRNL PMID 28524228 JRNL DOI 10.1002/1873-3468.12683 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 41966 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2168 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3004 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.2090 REMARK 3 BIN FREE R VALUE SET COUNT : 148 REMARK 3 BIN FREE R VALUE : 0.2140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3389 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 53 REMARK 3 SOLVENT ATOMS : 414 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.31000 REMARK 3 B22 (A**2) : 0.36000 REMARK 3 B33 (A**2) : 0.95000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.107 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.105 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.653 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3499 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3286 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4750 ; 1.495 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7561 ; 0.949 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 451 ; 5.708 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 154 ;34.827 ;23.247 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 549 ;12.334 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;15.441 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 532 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3974 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 725 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1813 ; 1.758 ; 1.171 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1812 ; 1.758 ; 1.171 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2261 ; 2.470 ; 1.746 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2262 ; 2.469 ; 1.746 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1686 ; 3.958 ; 1.711 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1686 ; 3.955 ; 1.710 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2490 ; 5.833 ; 2.376 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3956 ; 7.451 ;16.882 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3831 ; 7.256 ;15.586 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 229 B 1 229 13148 0.09 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -4 A 229 REMARK 3 ORIGIN FOR THE GROUP (A): 13.5830 -11.7790 -19.5070 REMARK 3 T TENSOR REMARK 3 T11: 0.0428 T22: 0.0421 REMARK 3 T33: 0.0165 T12: 0.0085 REMARK 3 T13: -0.0113 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 1.0313 L22: 1.3877 REMARK 3 L33: 1.0869 L12: -0.1304 REMARK 3 L13: -0.0373 L23: 0.2039 REMARK 3 S TENSOR REMARK 3 S11: -0.0320 S12: -0.1722 S13: 0.0980 REMARK 3 S21: 0.1831 S22: 0.0300 S23: -0.0785 REMARK 3 S31: -0.0528 S32: 0.0704 S33: 0.0020 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 229 REMARK 3 ORIGIN FOR THE GROUP (A): 12.1460 -30.4390 -47.9260 REMARK 3 T TENSOR REMARK 3 T11: 0.0372 T22: 0.0340 REMARK 3 T33: 0.0437 T12: 0.0041 REMARK 3 T13: 0.0071 T23: -0.0244 REMARK 3 L TENSOR REMARK 3 L11: 0.8223 L22: 0.6293 REMARK 3 L33: 1.4705 L12: 0.0782 REMARK 3 L13: -0.0991 L23: 0.3907 REMARK 3 S TENSOR REMARK 3 S11: -0.0360 S12: 0.1187 S13: -0.1613 REMARK 3 S21: 0.0049 S22: 0.0238 S23: -0.0229 REMARK 3 S31: 0.1916 S32: 0.0447 S33: 0.0122 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5WQO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1300002223. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41966 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5WQM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM ACETATE, 0.1M SODIUM REMARK 280 ACETATE TRIHYDRATE, PH 5.6, 30% PEG 4000, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.64000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.79700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.01750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.79700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.64000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.01750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 LEU B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 THR B 186 REMARK 465 GLU B 187 REMARK 465 MET B 188 REMARK 465 GLY B 189 REMARK 465 GLY B 190 REMARK 465 ASP B 191 REMARK 465 SER B 192 REMARK 465 ALA B 193 REMARK 465 PRO B 194 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 591 O HOH B 420 4444 2.11 REMARK 500 O HOH A 519 O HOH B 339 3554 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 115 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 110 -57.54 -130.38 REMARK 500 SER A 134 -142.51 -113.77 REMARK 500 MET A 148 74.36 -151.93 REMARK 500 ASN B 83 56.19 -111.10 REMARK 500 ALA B 110 -57.92 -131.04 REMARK 500 SER B 134 -142.33 -114.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 619 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH B 495 DISTANCE = 7.86 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 61 OE1 REMARK 620 2 ASP A 63 OD1 111.4 REMARK 620 3 ASP A 63 OD2 143.6 44.2 REMARK 620 4 HOH A 563 O 105.8 89.7 101.1 REMARK 620 5 ALA B 54 O 19.6 98.5 124.3 121.9 REMARK 620 6 HOH B 392 O 64.5 69.9 80.0 149.9 44.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5WQM RELATED DB: PDB REMARK 900 RELATED ID: 5WQN RELATED DB: PDB REMARK 900 RELATED ID: 5WQP RELATED DB: PDB DBREF 5WQO A 1 229 UNP Q9HWU9 Q9HWU9_PSEAE 1 229 DBREF 5WQO B 1 229 UNP Q9HWU9 Q9HWU9_PSEAE 1 229 SEQADV 5WQO GLY A -4 UNP Q9HWU9 EXPRESSION TAG SEQADV 5WQO PRO A -3 UNP Q9HWU9 EXPRESSION TAG SEQADV 5WQO LEU A -2 UNP Q9HWU9 EXPRESSION TAG SEQADV 5WQO GLY A -1 UNP Q9HWU9 EXPRESSION TAG SEQADV 5WQO SER A 0 UNP Q9HWU9 EXPRESSION TAG SEQADV 5WQO GLY B -4 UNP Q9HWU9 EXPRESSION TAG SEQADV 5WQO PRO B -3 UNP Q9HWU9 EXPRESSION TAG SEQADV 5WQO LEU B -2 UNP Q9HWU9 EXPRESSION TAG SEQADV 5WQO GLY B -1 UNP Q9HWU9 EXPRESSION TAG SEQADV 5WQO SER B 0 UNP Q9HWU9 EXPRESSION TAG SEQRES 1 A 234 GLY PRO LEU GLY SER MET HIS ASN VAL LEU ILE VAL GLY SEQRES 2 A 234 ALA SER ARG GLY ILE GLY LEU GLY LEU ALA ASP ALA PHE SEQRES 3 A 234 LEU GLN ARG GLY ALA GLN VAL PHE ALA VAL ALA ARG ARG SEQRES 4 A 234 PRO GLN GLY SER PRO GLY LEU GLN ALA LEU ALA GLU ARG SEQRES 5 A 234 ALA GLY GLU ARG LEU GLN ALA VAL THR GLY ASP LEU ASN SEQRES 6 A 234 GLN HIS ASP CYS ALA GLU ARG ILE GLY GLU MET LEU GLY SEQRES 7 A 234 GLU ARG ARG ILE ASP ARG LEU ILE VAL ASN ALA GLY ILE SEQRES 8 A 234 TYR GLY PRO GLN GLN GLN ASP VAL ALA GLU ILE ASP ALA SEQRES 9 A 234 GLU GLN THR ALA GLN LEU PHE LEU THR ASN ALA ILE ALA SEQRES 10 A 234 PRO LEU ARG LEU ALA ARG ALA LEU SER GLY ARG VAL SER SEQRES 11 A 234 ARG GLY GLY VAL VAL ALA PHE MET SER SER GLN MET ALA SEQRES 12 A 234 SER LEU ALA LEU GLY LEU SER ALA THR MET PRO LEU TYR SEQRES 13 A 234 GLY ALA SER LYS ALA ALA LEU ASN SER LEU VAL ARG SER SEQRES 14 A 234 TRP GLU GLY GLU PHE GLU GLU LEU PRO PHE SER LEU LEU SEQRES 15 A 234 LEU LEU HIS PRO GLY TRP VAL ARG THR GLU MET GLY GLY SEQRES 16 A 234 ASP SER ALA PRO LEU SER VAL GLU GLU SER ALA ALA GLY SEQRES 17 A 234 LEU VAL ALA ALA VAL GLU ASP ALA ALA GLY VAL ASN ALA SEQRES 18 A 234 CYS ARG PHE VAL ASP TYR ARG ASN GLN PRO LEU PRO TRP SEQRES 1 B 234 GLY PRO LEU GLY SER MET HIS ASN VAL LEU ILE VAL GLY SEQRES 2 B 234 ALA SER ARG GLY ILE GLY LEU GLY LEU ALA ASP ALA PHE SEQRES 3 B 234 LEU GLN ARG GLY ALA GLN VAL PHE ALA VAL ALA ARG ARG SEQRES 4 B 234 PRO GLN GLY SER PRO GLY LEU GLN ALA LEU ALA GLU ARG SEQRES 5 B 234 ALA GLY GLU ARG LEU GLN ALA VAL THR GLY ASP LEU ASN SEQRES 6 B 234 GLN HIS ASP CYS ALA GLU ARG ILE GLY GLU MET LEU GLY SEQRES 7 B 234 GLU ARG ARG ILE ASP ARG LEU ILE VAL ASN ALA GLY ILE SEQRES 8 B 234 TYR GLY PRO GLN GLN GLN ASP VAL ALA GLU ILE ASP ALA SEQRES 9 B 234 GLU GLN THR ALA GLN LEU PHE LEU THR ASN ALA ILE ALA SEQRES 10 B 234 PRO LEU ARG LEU ALA ARG ALA LEU SER GLY ARG VAL SER SEQRES 11 B 234 ARG GLY GLY VAL VAL ALA PHE MET SER SER GLN MET ALA SEQRES 12 B 234 SER LEU ALA LEU GLY LEU SER ALA THR MET PRO LEU TYR SEQRES 13 B 234 GLY ALA SER LYS ALA ALA LEU ASN SER LEU VAL ARG SER SEQRES 14 B 234 TRP GLU GLY GLU PHE GLU GLU LEU PRO PHE SER LEU LEU SEQRES 15 B 234 LEU LEU HIS PRO GLY TRP VAL ARG THR GLU MET GLY GLY SEQRES 16 B 234 ASP SER ALA PRO LEU SER VAL GLU GLU SER ALA ALA GLY SEQRES 17 B 234 LEU VAL ALA ALA VAL GLU ASP ALA ALA GLY VAL ASN ALA SEQRES 18 B 234 CYS ARG PHE VAL ASP TYR ARG ASN GLN PRO LEU PRO TRP HET NAP A 301 48 HET EDO A 302 4 HET NA A 303 1 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETNAM NA SODIUM ION HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NAP C21 H28 N7 O17 P3 FORMUL 4 EDO C2 H6 O2 FORMUL 5 NA NA 1+ FORMUL 6 HOH *414(H2 O) HELIX 1 AA1 ARG A 11 ARG A 24 1 14 HELIX 2 AA2 ARG A 34 GLY A 37 5 4 HELIX 3 AA3 SER A 38 GLY A 49 1 12 HELIX 4 AA4 ASP A 63 GLY A 73 1 11 HELIX 5 AA5 ASP A 98 ALA A 110 1 13 HELIX 6 AA6 ALA A 110 SER A 121 1 12 HELIX 7 AA7 SER A 135 SER A 139 5 5 HELIX 8 AA8 LEU A 144 THR A 147 5 4 HELIX 9 AA9 MET A 148 GLY A 167 1 20 HELIX 10 AB1 SER A 196 ALA A 211 1 16 HELIX 11 AB2 ARG B 11 ARG B 24 1 14 HELIX 12 AB3 ARG B 34 GLY B 37 5 4 HELIX 13 AB4 SER B 38 GLY B 49 1 12 HELIX 14 AB5 ASP B 63 GLY B 73 1 11 HELIX 15 AB6 ASP B 98 ALA B 110 1 13 HELIX 16 AB7 ALA B 110 SER B 121 1 12 HELIX 17 AB8 SER B 135 SER B 139 5 5 HELIX 18 AB9 MET B 148 GLY B 167 1 20 HELIX 19 AC1 SER B 196 ALA B 212 1 17 SHEET 1 AA1 7 LEU A 52 THR A 56 0 SHEET 2 AA1 7 GLN A 27 ALA A 32 1 N VAL A 28 O GLN A 53 SHEET 3 AA1 7 ASN A 3 VAL A 7 1 N VAL A 4 O PHE A 29 SHEET 4 AA1 7 ILE A 77 VAL A 82 1 O ILE A 81 N VAL A 7 SHEET 5 AA1 7 VAL A 124 MET A 133 1 O ALA A 131 N LEU A 80 SHEET 6 AA1 7 PHE A 174 HIS A 180 1 O LEU A 179 N PHE A 132 SHEET 7 AA1 7 CYS A 217 ASP A 221 1 O ARG A 218 N LEU A 178 SHEET 1 AA2 7 LEU B 52 THR B 56 0 SHEET 2 AA2 7 GLN B 27 ALA B 32 1 N VAL B 28 O GLN B 53 SHEET 3 AA2 7 ASN B 3 VAL B 7 1 N VAL B 4 O PHE B 29 SHEET 4 AA2 7 ILE B 77 VAL B 82 1 O ILE B 81 N VAL B 7 SHEET 5 AA2 7 VAL B 124 MET B 133 1 O ALA B 131 N LEU B 80 SHEET 6 AA2 7 SER B 175 HIS B 180 1 O LEU B 179 N PHE B 132 SHEET 7 AA2 7 CYS B 217 ASP B 221 1 O ARG B 218 N LEU B 178 LINK OE1 GLN A 61 NA NA A 303 1555 1555 2.68 LINK OD1 ASP A 63 NA NA A 303 1555 1555 2.91 LINK OD2 ASP A 63 NA NA A 303 1555 1555 2.80 LINK NA NA A 303 O HOH A 563 1555 1555 2.03 LINK NA NA A 303 O ALA B 54 2544 1555 2.41 LINK NA NA A 303 O HOH B 392 1555 2545 3.06 SITE 1 AC1 29 SER A 10 ARG A 11 GLY A 12 ILE A 13 SITE 2 AC1 29 ARG A 33 ASP A 58 LEU A 59 ASN A 60 SITE 3 AC1 29 ASN A 83 ALA A 84 GLY A 85 MET A 133 SITE 4 AC1 29 SER A 134 TYR A 151 LYS A 155 PRO A 181 SITE 5 AC1 29 GLY A 182 TRP A 183 VAL A 184 THR A 186 SITE 6 AC1 29 MET A 188 GLY A 189 EDO A 302 HOH A 401 SITE 7 AC1 29 HOH A 403 HOH A 405 HOH A 424 HOH A 440 SITE 8 AC1 29 HOH A 507 SITE 1 AC2 6 SER A 135 GLN A 136 TYR A 151 HIS A 180 SITE 2 AC2 6 NAP A 301 HOH A 434 SITE 1 AC3 5 GLN A 61 ASP A 63 HOH A 563 ALA B 54 SITE 2 AC3 5 HOH B 392 CRYST1 65.280 76.035 91.594 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015319 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013152 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010918 0.00000