HEADER PROTEIN BINDING 29-NOV-16 5WQZ TITLE SOLUTION STRUCTURE OF A HISTONE BINDING DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-122; COMPND 5 SYNONYM: BDF5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI BRUCEI (STRAIN 927/4 SOURCE 3 GUTAT10.1); SOURCE 4 ORGANISM_TAXID: 185431; SOURCE 5 STRAIN: 927/4 GUTAT10.1; SOURCE 6 GENE: TB11.01.5000; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET-22B KEYWDS HISTONE BINDING DOMAIN, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.MI REVDAT 3 15-MAY-24 5WQZ 1 REMARK REVDAT 2 14-JUN-23 5WQZ 1 COMPND REMARK REVDAT 1 25-JAN-17 5WQZ 0 JRNL AUTH J.MI JRNL TITL SOLUTION STRUCTURE OF A HISTONE BINDING DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WQZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1300001943. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 0.8 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.5 G/L [U-100% 15N] NH4CL, 2.5 REMARK 210 G/L [U-100% 13C] C6H12O6, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-15N NOESY; REMARK 210 3D CBCA(CO)NH; 3D HBHA(CO)NH; 3D REMARK 210 H(CCO)NH; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 5 -74.92 -172.54 REMARK 500 1 TYR A 9 75.49 -177.00 REMARK 500 1 ARG A 11 -36.35 -179.89 REMARK 500 1 ASP A 22 95.08 177.42 REMARK 500 1 ARG A 23 67.06 -175.95 REMARK 500 1 PRO A 24 78.03 -69.77 REMARK 500 1 LEU A 29 -37.19 -172.35 REMARK 500 1 SER A 31 19.49 -146.84 REMARK 500 1 GLN A 37 -70.98 -100.50 REMARK 500 1 PRO A 39 80.80 -69.75 REMARK 500 1 GLU A 40 -35.31 -175.83 REMARK 500 1 CYS A 49 153.53 64.32 REMARK 500 1 PRO A 50 76.97 -69.75 REMARK 500 1 ASN A 51 128.08 66.63 REMARK 500 1 CYS A 53 -77.51 -110.52 REMARK 500 1 ASP A 54 -65.21 178.05 REMARK 500 1 TYR A 69 92.64 54.52 REMARK 500 1 GLN A 72 40.93 -178.88 REMARK 500 1 ASN A 91 108.38 177.97 REMARK 500 1 ALA A 93 -70.23 -99.97 REMARK 500 1 ALA A 96 56.10 -117.44 REMARK 500 1 GLN A 118 69.89 -113.23 REMARK 500 1 LEU A 123 -41.02 -134.89 REMARK 500 2 SER A 2 -169.80 -160.37 REMARK 500 2 ARG A 5 -74.89 -158.94 REMARK 500 2 TYR A 9 75.93 -177.80 REMARK 500 2 ARG A 11 -35.26 -179.27 REMARK 500 2 LEU A 17 -70.38 -54.11 REMARK 500 2 ASP A 22 73.11 -178.06 REMARK 500 2 ARG A 23 74.09 -172.97 REMARK 500 2 LEU A 29 -38.93 -166.00 REMARK 500 2 SER A 31 27.67 -148.67 REMARK 500 2 GLN A 37 -73.60 -102.42 REMARK 500 2 PRO A 39 76.75 -69.79 REMARK 500 2 GLU A 40 -37.55 -170.11 REMARK 500 2 CYS A 49 163.97 63.51 REMARK 500 2 PRO A 50 78.50 -69.78 REMARK 500 2 ASN A 51 106.95 64.76 REMARK 500 2 CYS A 53 -77.86 -105.55 REMARK 500 2 ASP A 54 -75.67 178.49 REMARK 500 2 TYR A 67 103.79 -51.06 REMARK 500 2 TYR A 69 90.92 58.00 REMARK 500 2 GLN A 72 46.30 -174.16 REMARK 500 2 ASN A 91 113.09 177.67 REMARK 500 2 ALA A 93 -70.07 -97.89 REMARK 500 2 GLU A 94 18.81 59.85 REMARK 500 2 ALA A 96 56.99 -117.92 REMARK 500 3 SER A 2 -169.55 -61.22 REMARK 500 3 ARG A 5 -73.29 -174.38 REMARK 500 3 TYR A 9 75.82 -176.78 REMARK 500 REMARK 500 THIS ENTRY HAS 457 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25198 RELATED DB: BMRB REMARK 900 RELATED ID: 36037 RELATED DB: BMRB REMARK 900 HISTONE BINDING DOMAIN DBREF 5WQZ A 1 122 UNP Q382J7 Q382J7_TRYB2 1 122 SEQADV 5WQZ LEU A 123 UNP Q382J7 EXPRESSION TAG SEQADV 5WQZ GLU A 124 UNP Q382J7 EXPRESSION TAG SEQRES 1 A 124 MET SER GLN ASN ARG GLN LEU LEU TYR PRO ARG GLU GLU SEQRES 2 A 124 MET VAL SER LEU VAL ARG SER LEU ASP ARG PRO GLN GLU SEQRES 3 A 124 ASN GLY LEU PHE SER GLN ASP VAL LEU LEU GLN TYR PRO SEQRES 4 A 124 GLU LEU ALA GLU SER TYR THR LYS VAL CYS PRO ASN ARG SEQRES 5 A 124 CYS ASP LEU ALA THR ALA ALA ASP ARG ALA ALA LYS GLY SEQRES 6 A 124 ALA TYR GLY TYR ASP VAL GLN LEU THR THR LEU LYS GLU SEQRES 7 A 124 ASP ILE ARG LEU MET VAL ASN ASN CYS ILE LEU PHE ASN SEQRES 8 A 124 GLY ALA GLU GLY ALA TYR ALA ASP ALA ALA ARG THR PHE SEQRES 9 A 124 GLU LYS PHE ALA MET GLY LYS ILE ASP ALA TYR ILE SER SEQRES 10 A 124 GLN LYS VAL GLY GLY LEU GLU HELIX 1 AA1 GLU A 13 LEU A 21 1 9 HELIX 2 AA2 ASP A 33 GLN A 37 5 5 HELIX 3 AA3 GLU A 43 VAL A 48 1 6 HELIX 4 AA4 ASP A 54 LYS A 64 1 11 HELIX 5 AA5 LEU A 73 ASN A 91 1 19 HELIX 6 AA6 TYR A 97 GLN A 118 1 22 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1