HEADER METAL BINDING PROTEIN 20-DEC-16 5WUQ TITLE CRYSTAL STRUCTURE OF SIGW IN COMPLEX WITH ITS ANTI-SIGMA RSIW, A ZINC TITLE 2 BINDING FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ECF RNA POLYMERASE SIGMA FACTOR SIGW; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ECF SIGMA FACTOR SIGW,ALTERNATIVE RNA POLYMERASE SIGMA COMPND 5 FACTOR SIGW,RNA POLYMERASE SIGMA-W FACTOR,SIGMA-W FACTOR; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ANTI-SIGMA-W FACTOR RSIW; COMPND 9 CHAIN: C, D; COMPND 10 FRAGMENT: UNP RESIDUES 1-80; COMPND 11 SYNONYM: REGULATOR OF SIGW,SIGMA-W ANTI-SIGMA FACTOR RSIW; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: SIGW; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-DUET1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168; SOURCE 13 ORGANISM_TAXID: 224308; SOURCE 14 STRAIN: 168; SOURCE 15 GENE: RSIW; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21 STAR (DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET-DUET1 KEYWDS SIGMA-ANTI-SIGMA COMPLEX, ZINC BINDING MOTIF, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.R.DEVKOTA,E.KWON,S.C.HA,D.Y.KIM REVDAT 2 20-MAR-24 5WUQ 1 REMARK REVDAT 1 29-MAR-17 5WUQ 0 JRNL AUTH S.R.DEVKOTA,E.KWON,S.C.HA,H.W.CHANG,D.Y.KIM JRNL TITL STRUCTURAL INSIGHTS INTO THE REGULATION OF BACILLUS SUBTILIS JRNL TITL 2 SIGW ACTIVITY BY ANTI-SIGMA RSIW JRNL REF PLOS ONE V. 12 74284 2017 JRNL REFN ESSN 1932-6203 JRNL PMID 28319136 JRNL DOI 10.1371/JOURNAL.PONE.0174284 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 13669 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 662 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 994 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 41 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3734 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 84.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.29000 REMARK 3 B22 (A**2) : 0.94000 REMARK 3 B33 (A**2) : -3.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.428 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.301 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 33.568 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.861 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3793 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3812 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5098 ; 1.289 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8770 ; 0.954 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 446 ; 5.264 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 182 ;41.066 ;23.956 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 765 ;16.757 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;15.793 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 579 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4129 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 837 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1802 ; 1.741 ; 5.676 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1801 ; 1.742 ; 5.675 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2242 ; 2.908 ; 8.508 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2243 ; 2.907 ; 8.509 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1991 ; 1.774 ; 5.878 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1992 ; 1.774 ; 5.879 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2857 ; 3.034 ; 8.734 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4207 ; 4.623 ;43.439 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4208 ; 4.622 ;43.447 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 187 REMARK 3 ORIGIN FOR THE GROUP (A): -20.1698 0.8246 18.2849 REMARK 3 T TENSOR REMARK 3 T11: 0.0313 T22: 0.1042 REMARK 3 T33: 0.0653 T12: -0.0024 REMARK 3 T13: -0.0043 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 4.7315 L22: 3.0595 REMARK 3 L33: 4.1509 L12: 1.5052 REMARK 3 L13: -1.7758 L23: 0.0762 REMARK 3 S TENSOR REMARK 3 S11: -0.0922 S12: -0.3062 S13: -0.2905 REMARK 3 S21: -0.0070 S22: 0.0512 S23: 0.1437 REMARK 3 S31: -0.1192 S32: 0.4032 S33: 0.0410 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 187 REMARK 3 ORIGIN FOR THE GROUP (A): -19.9036 -0.0992 -19.0043 REMARK 3 T TENSOR REMARK 3 T11: 0.2314 T22: 0.0788 REMARK 3 T33: 0.0570 T12: 0.0935 REMARK 3 T13: 0.0632 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 3.3672 L22: 1.5562 REMARK 3 L33: 5.5751 L12: 0.0638 REMARK 3 L13: 0.6710 L23: 0.0190 REMARK 3 S TENSOR REMARK 3 S11: 0.3407 S12: 0.1971 S13: -0.0192 REMARK 3 S21: -0.0709 S22: -0.1589 S23: 0.1847 REMARK 3 S31: -0.6858 S32: 0.0081 S33: -0.1818 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 3 C 72 REMARK 3 ORIGIN FOR THE GROUP (A): -11.6619 11.2381 4.9890 REMARK 3 T TENSOR REMARK 3 T11: 0.2704 T22: 0.2403 REMARK 3 T33: 0.0550 T12: -0.1761 REMARK 3 T13: 0.0215 T23: -0.0475 REMARK 3 L TENSOR REMARK 3 L11: 4.5232 L22: 5.2170 REMARK 3 L33: 3.8779 L12: 1.9433 REMARK 3 L13: -2.8313 L23: -2.0319 REMARK 3 S TENSOR REMARK 3 S11: 0.3344 S12: 0.1532 S13: 0.1397 REMARK 3 S21: -0.0925 S22: -0.0401 S23: -0.1255 REMARK 3 S31: -0.5428 S32: 0.5488 S33: -0.2942 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 3 D 71 REMARK 3 ORIGIN FOR THE GROUP (A): -8.5443 -7.8536 -5.0880 REMARK 3 T TENSOR REMARK 3 T11: 0.1326 T22: 0.2392 REMARK 3 T33: 0.1185 T12: 0.0812 REMARK 3 T13: 0.0393 T23: 0.0141 REMARK 3 L TENSOR REMARK 3 L11: 5.9354 L22: 4.1536 REMARK 3 L33: 6.1566 L12: -3.4111 REMARK 3 L13: 3.1185 L23: -1.6632 REMARK 3 S TENSOR REMARK 3 S11: 0.1681 S12: -0.4423 S13: 0.0935 REMARK 3 S21: 0.1490 S22: 0.1340 S23: -0.3070 REMARK 3 S31: 0.2635 S32: 0.5339 S33: -0.3021 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5WUQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1300002413. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14411 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 41.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, ISOPROPANOL, CALCIUM REMARK 280 CHLORIDE, PH 7.5, MICROBATCH, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.73100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.18700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.10300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.18700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.73100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.10300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 96 REMARK 465 GLU A 97 REMARK 465 VAL A 98 REMARK 465 ALA A 99 REMARK 465 GLY A 100 REMARK 465 THR A 101 REMARK 465 GLU A 102 REMARK 465 GLY A 103 REMARK 465 LEU A 104 REMARK 465 THR A 105 REMARK 465 MET A 106 REMARK 465 TYR A 107 REMARK 465 SER A 108 REMARK 465 GLN A 109 REMARK 465 ILE A 110 REMARK 465 VAL A 111 REMARK 465 ALA A 112 REMARK 465 ASP A 113 REMARK 465 GLY A 114 REMARK 465 VAL A 115 REMARK 465 LEU A 116 REMARK 465 PRO A 117 REMARK 465 GLU A 118 REMARK 465 ASP A 119 REMARK 465 ALA A 120 REMARK 465 VAL A 121 REMARK 465 VAL A 122 REMARK 465 SER A 123 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 ASP B 95 REMARK 465 ALA B 96 REMARK 465 GLU B 97 REMARK 465 VAL B 98 REMARK 465 ALA B 99 REMARK 465 GLY B 100 REMARK 465 THR B 101 REMARK 465 GLU B 102 REMARK 465 GLY B 103 REMARK 465 LEU B 104 REMARK 465 THR B 105 REMARK 465 MET B 106 REMARK 465 TYR B 107 REMARK 465 SER B 108 REMARK 465 GLN B 109 REMARK 465 ILE B 110 REMARK 465 VAL B 111 REMARK 465 ALA B 112 REMARK 465 ASP B 113 REMARK 465 GLY B 114 REMARK 465 VAL B 115 REMARK 465 LEU B 116 REMARK 465 PRO B 117 REMARK 465 GLU B 118 REMARK 465 ASP B 119 REMARK 465 ALA B 120 REMARK 465 VAL B 121 REMARK 465 VAL B 122 REMARK 465 SER B 123 REMARK 465 LEU B 124 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 LYS C 73 REMARK 465 GLU C 74 REMARK 465 LYS C 75 REMARK 465 LYS C 76 REMARK 465 ARG C 77 REMARK 465 ALA C 78 REMARK 465 SER C 79 REMARK 465 VAL C 80 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 PRO D 72 REMARK 465 LYS D 73 REMARK 465 GLU D 74 REMARK 465 LYS D 75 REMARK 465 LYS D 76 REMARK 465 ARG D 77 REMARK 465 ALA D 78 REMARK 465 SER D 79 REMARK 465 VAL D 80 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE B 150 -60.77 -106.81 REMARK 500 SER D 55 61.28 -111.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 3 SG REMARK 620 2 HIS C 30 NE2 97.1 REMARK 620 3 CYS C 34 SG 127.4 98.9 REMARK 620 4 CYS C 37 SG 111.9 103.8 112.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 3 SG REMARK 620 2 HIS D 30 NE2 93.9 REMARK 620 3 CYS D 34 SG 128.0 117.2 REMARK 620 4 CYS D 37 SG 116.0 94.0 103.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5WUR RELATED DB: PDB DBREF 5WUQ A 1 187 UNP Q45585 SIGW_BACSU 1 187 DBREF 5WUQ B 1 187 UNP Q45585 SIGW_BACSU 1 187 DBREF 5WUQ C 1 80 UNP Q45588 RSIW_BACSU 1 80 DBREF 5WUQ D 1 80 UNP Q45588 RSIW_BACSU 1 80 SEQRES 1 A 187 MET GLU MET MET ILE LYS LYS ARG ILE LYS GLN VAL LYS SEQRES 2 A 187 LYS GLY ASP GLN ASP ALA PHE ALA ASP ILE VAL ASP ILE SEQRES 3 A 187 TYR LYS ASP LYS ILE TYR GLN LEU CYS TYR ARG MET LEU SEQRES 4 A 187 GLY ASN VAL HIS GLU ALA GLU ASP ILE ALA GLN GLU ALA SEQRES 5 A 187 PHE ILE ARG ALA TYR VAL ASN ILE ASP SER PHE ASP ILE SEQRES 6 A 187 ASN ARG LYS PHE SER THR TRP LEU TYR ARG ILE ALA THR SEQRES 7 A 187 ASN LEU THR ILE ASP ARG ILE ARG LYS LYS LYS PRO ASP SEQRES 8 A 187 TYR TYR LEU ASP ALA GLU VAL ALA GLY THR GLU GLY LEU SEQRES 9 A 187 THR MET TYR SER GLN ILE VAL ALA ASP GLY VAL LEU PRO SEQRES 10 A 187 GLU ASP ALA VAL VAL SER LEU GLU LEU SER ASN THR ILE SEQRES 11 A 187 GLN GLN LYS ILE LEU LYS LEU PRO ASP LYS TYR ARG THR SEQRES 12 A 187 VAL ILE VAL LEU LYS TYR ILE ASP GLU LEU SER LEU ILE SEQRES 13 A 187 GLU ILE GLY GLU ILE LEU ASN ILE PRO VAL GLY THR VAL SEQRES 14 A 187 LYS THR ARG ILE HIS ARG GLY ARG GLU ALA LEU ARG LYS SEQRES 15 A 187 GLN LEU ARG ASP LEU SEQRES 1 B 187 MET GLU MET MET ILE LYS LYS ARG ILE LYS GLN VAL LYS SEQRES 2 B 187 LYS GLY ASP GLN ASP ALA PHE ALA ASP ILE VAL ASP ILE SEQRES 3 B 187 TYR LYS ASP LYS ILE TYR GLN LEU CYS TYR ARG MET LEU SEQRES 4 B 187 GLY ASN VAL HIS GLU ALA GLU ASP ILE ALA GLN GLU ALA SEQRES 5 B 187 PHE ILE ARG ALA TYR VAL ASN ILE ASP SER PHE ASP ILE SEQRES 6 B 187 ASN ARG LYS PHE SER THR TRP LEU TYR ARG ILE ALA THR SEQRES 7 B 187 ASN LEU THR ILE ASP ARG ILE ARG LYS LYS LYS PRO ASP SEQRES 8 B 187 TYR TYR LEU ASP ALA GLU VAL ALA GLY THR GLU GLY LEU SEQRES 9 B 187 THR MET TYR SER GLN ILE VAL ALA ASP GLY VAL LEU PRO SEQRES 10 B 187 GLU ASP ALA VAL VAL SER LEU GLU LEU SER ASN THR ILE SEQRES 11 B 187 GLN GLN LYS ILE LEU LYS LEU PRO ASP LYS TYR ARG THR SEQRES 12 B 187 VAL ILE VAL LEU LYS TYR ILE ASP GLU LEU SER LEU ILE SEQRES 13 B 187 GLU ILE GLY GLU ILE LEU ASN ILE PRO VAL GLY THR VAL SEQRES 14 B 187 LYS THR ARG ILE HIS ARG GLY ARG GLU ALA LEU ARG LYS SEQRES 15 B 187 GLN LEU ARG ASP LEU SEQRES 1 C 80 MET SER CYS PRO GLU GLN ILE VAL GLN LEU MET HIS MET SEQRES 2 C 80 HIS LEU ASP GLY ASP ILE LEU PRO LYS ASP GLU HIS VAL SEQRES 3 C 80 LEU ASN GLU HIS LEU GLU THR CYS GLU LYS CYS ARG LYS SEQRES 4 C 80 HIS PHE TYR GLU MET GLU LYS SER ILE ALA LEU VAL ARG SEQRES 5 C 80 SER THR SER HIS VAL GLU ALA PRO ALA ASP PHE THR ALA SEQRES 6 C 80 ASN VAL MET ALA LYS LEU PRO LYS GLU LYS LYS ARG ALA SEQRES 7 C 80 SER VAL SEQRES 1 D 80 MET SER CYS PRO GLU GLN ILE VAL GLN LEU MET HIS MET SEQRES 2 D 80 HIS LEU ASP GLY ASP ILE LEU PRO LYS ASP GLU HIS VAL SEQRES 3 D 80 LEU ASN GLU HIS LEU GLU THR CYS GLU LYS CYS ARG LYS SEQRES 4 D 80 HIS PHE TYR GLU MET GLU LYS SER ILE ALA LEU VAL ARG SEQRES 5 D 80 SER THR SER HIS VAL GLU ALA PRO ALA ASP PHE THR ALA SEQRES 6 D 80 ASN VAL MET ALA LYS LEU PRO LYS GLU LYS LYS ARG ALA SEQRES 7 D 80 SER VAL HET ZN C 301 1 HET ZN D 301 1 HETNAM ZN ZINC ION FORMUL 5 ZN 2(ZN 2+) HELIX 1 AA1 GLU A 2 LYS A 14 1 13 HELIX 2 AA2 ALA A 19 GLY A 40 1 22 HELIX 3 AA3 ASN A 41 ASN A 59 1 19 HELIX 4 AA4 ILE A 60 PHE A 63 5 4 HELIX 5 AA5 LYS A 68 LYS A 89 1 22 HELIX 6 AA6 GLU A 125 LEU A 135 1 11 HELIX 7 AA7 PRO A 138 ILE A 150 1 13 HELIX 8 AA8 SER A 154 ASN A 163 1 10 HELIX 9 AA9 PRO A 165 ARG A 185 1 21 HELIX 10 AB1 MET B 4 GLY B 15 1 12 HELIX 11 AB2 ASP B 18 GLY B 40 1 23 HELIX 12 AB3 ASN B 41 ASN B 59 1 19 HELIX 13 AB4 LYS B 68 LYS B 88 1 21 HELIX 14 AB5 LEU B 126 LEU B 135 1 10 HELIX 15 AB6 PRO B 138 ILE B 150 1 13 HELIX 16 AB7 SER B 154 ASN B 163 1 10 HELIX 17 AB8 PRO B 165 ARG B 185 1 21 HELIX 18 AB9 GLN C 6 ASP C 16 1 11 HELIX 19 AC1 LEU C 20 THR C 33 1 14 HELIX 20 AC2 CYS C 34 SER C 53 1 20 HELIX 21 AC3 ASP C 62 LEU C 71 1 10 HELIX 22 AC4 GLN D 6 ASP D 16 1 11 HELIX 23 AC5 LEU D 20 CYS D 34 1 15 HELIX 24 AC6 CYS D 34 SER D 53 1 20 HELIX 25 AC7 ASP D 62 ALA D 69 1 8 LINK SG CYS C 3 ZN ZN C 301 1555 1555 2.33 LINK NE2 HIS C 30 ZN ZN C 301 1555 1555 2.51 LINK SG CYS C 34 ZN ZN C 301 1555 1555 2.10 LINK SG CYS C 37 ZN ZN C 301 1555 1555 2.32 LINK SG CYS D 3 ZN ZN D 301 1555 1555 2.46 LINK NE2 HIS D 30 ZN ZN D 301 1555 1555 2.44 LINK SG CYS D 34 ZN ZN D 301 1555 1555 2.37 LINK SG CYS D 37 ZN ZN D 301 1555 1555 2.28 SITE 1 AC1 4 CYS C 3 HIS C 30 CYS C 34 CYS C 37 SITE 1 AC2 4 CYS D 3 HIS D 30 CYS D 34 CYS D 37 CRYST1 63.462 64.206 138.374 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015757 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015575 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007227 0.00000