HEADER HYDROLASE 31-DEC-16 5WWA OBSLTE 06-MAR-19 5WWA 6JHI TITLE CATALYTIC MECHANISM, CYCLODEXTRIN INHIBITION, AND ALLOSTERIC TITLE 2 REGULATION OF PAENIBACILLUS BARENGOLTZII PULLLULANASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PULULLANASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TYPE I PULLULANASE; COMPND 5 EC: 3.2.1.41; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PAENIBACILLUS BARENGOLTZII; SOURCE 3 ORGANISM_TAXID: 343517; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD(DE3)PLYSS AG; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS GH13, CALCIUM ION, PULLULANASE, MALTOTETRAOSE, CHLORIDE ION, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.W.WU,Z.QIN,D.YANG,Z.Q.JIANG,X.YOU,P.HUANG REVDAT 2 06-MAR-19 5WWA 1 OBSLTE REVDAT 1 21-MAR-18 5WWA 0 JRNL AUTH S.W.WU,Z.QIN,D.YANG,Z.Q.JIANG,X.YOU,P.HUANG JRNL TITL CATALYTIC MECHANISM, CYCLODEXTRIN INHIBITION, AND ALLOSTERIC JRNL TITL 2 REGULATION OF PAENIBACILLUS BARENGOLTZII PULLLULANASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2474: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 30974 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.500 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.0729 - 6.9439 0.94 1924 135 0.1584 0.1723 REMARK 3 2 6.9439 - 5.5169 0.96 1991 143 0.1621 0.2178 REMARK 3 3 5.5169 - 4.8211 0.97 2021 139 0.1354 0.1930 REMARK 3 4 4.8211 - 4.3810 0.98 2016 144 0.1168 0.1468 REMARK 3 5 4.3810 - 4.0674 0.96 1966 135 0.1191 0.1558 REMARK 3 6 4.0674 - 3.8278 0.96 1971 142 0.1327 0.1706 REMARK 3 7 3.8278 - 3.6363 0.97 1981 141 0.1382 0.1739 REMARK 3 8 3.6363 - 3.4781 0.97 2048 140 0.1426 0.1643 REMARK 3 9 3.4781 - 3.3443 0.98 1983 139 0.1550 0.1807 REMARK 3 10 3.3443 - 3.2290 0.99 2062 142 0.1643 0.2286 REMARK 3 11 3.2290 - 3.1280 0.99 2034 143 0.1765 0.2576 REMARK 3 12 3.1280 - 3.0387 0.99 2043 146 0.1834 0.2287 REMARK 3 13 3.0387 - 2.9587 0.99 2029 139 0.1874 0.2431 REMARK 3 14 2.9587 - 2.8865 0.99 2058 149 0.1911 0.2776 REMARK 3 15 2.8865 - 2.8209 0.99 1993 141 0.1872 0.2706 REMARK 3 16 2.8209 - 2.7609 0.96 2036 138 0.1839 0.2339 REMARK 3 17 2.7609 - 2.7057 0.98 1980 136 0.1889 0.2369 REMARK 3 18 2.7057 - 2.6547 0.99 2042 140 0.1802 0.2435 REMARK 3 19 2.6547 - 2.6073 0.99 2057 142 0.1906 0.2633 REMARK 3 20 2.6073 - 2.5631 0.99 2021 140 0.1806 0.2220 REMARK 3 21 2.5631 - 2.5217 0.99 2059 142 0.1796 0.2296 REMARK 3 22 2.5217 - 2.4830 0.99 2058 140 0.1751 0.2668 REMARK 3 23 2.4830 - 2.4464 0.99 2045 138 0.1728 0.2279 REMARK 3 24 2.4464 - 2.4120 0.99 2008 138 0.1675 0.2363 REMARK 3 25 2.4120 - 2.3794 0.99 2056 141 0.1690 0.2030 REMARK 3 26 2.3794 - 2.3485 0.99 2025 137 0.1718 0.2435 REMARK 3 27 2.3485 - 2.3192 0.87 1791 122 0.1649 0.2281 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5294 REMARK 3 ANGLE : 0.945 7191 REMARK 3 CHIRALITY : 0.060 785 REMARK 3 PLANARITY : 0.006 934 REMARK 3 DIHEDRAL : 3.121 3076 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE FACTOR FILE CONTAINS REMARK 3 FRIEDEL PAIRS IN I_PLUS/MINUS COLUMNS REMARK 4 REMARK 4 5WWA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1300002503. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97776 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30974 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.319 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7420 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.22600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.778 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5WVP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.08M CALCIUM CHLORIDE, 0.1M MES, 22% REMARK 280 PEG 3350, 0.7% BETA-OG, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.25850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.91200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.25850 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 70.91200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 465 MET A 21 REMARK 465 ALA A 22 REMARK 465 SER A 23 REMARK 465 MET A 24 REMARK 465 LEU A 25 REMARK 465 SER A 26 REMARK 465 VAL A 27 REMARK 465 GLN A 28 REMARK 465 LYS A 29 REMARK 465 GLU A 30 REMARK 465 PHE A 31 REMARK 465 GLY A 661 REMARK 465 ALA A 662 REMARK 465 SER A 663 REMARK 465 GLY A 664 REMARK 465 GLU A 665 REMARK 465 ALA A 666 REMARK 465 ALA A 667 REMARK 465 ALA A 668 REMARK 465 ALA A 669 REMARK 465 ALA A 670 REMARK 465 PRO A 671 REMARK 465 ALA A 672 REMARK 465 ALA A 673 REMARK 465 ALA A 674 REMARK 465 GLY A 675 REMARK 465 GLY A 676 REMARK 465 PRO A 677 REMARK 465 PRO A 678 REMARK 465 ALA A 679 REMARK 465 GLY A 680 REMARK 465 GLY A 681 REMARK 465 ARG A 698 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 493 CG OD1 OD2 REMARK 470 GLU A 659 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND1 HIS A 32 O HOH A 801 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 79 72.79 -150.38 REMARK 500 ASP A 106 -156.66 -123.20 REMARK 500 GLN A 108 43.41 39.40 REMARK 500 ALA A 116 42.96 -93.14 REMARK 500 ASP A 118 103.08 -58.14 REMARK 500 ASN A 148 13.61 59.57 REMARK 500 PRO A 236 113.21 -33.90 REMARK 500 SER A 241 151.09 -48.81 REMARK 500 TYR A 255 136.93 -176.42 REMARK 500 TYR A 259 42.39 -81.63 REMARK 500 GLN A 262 -52.72 -121.45 REMARK 500 PHE A 338 14.55 58.83 REMARK 500 LEU A 374 57.13 37.85 REMARK 500 ASP A 394 103.40 -170.38 REMARK 500 ALA A 466 5.50 -69.54 REMARK 500 GLN A 477 -148.25 -135.63 REMARK 500 ASN A 494 -179.51 64.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1239 DISTANCE = 6.05 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 707 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 239 OD1 REMARK 620 2 TYR A 240 O 93.5 REMARK 620 3 GLU A 247 OE1 85.1 162.6 REMARK 620 4 GLU A 268 OE1 87.4 94.2 103.0 REMARK 620 5 HOH A 865 O 163.8 82.4 103.4 77.4 REMARK 620 6 HOH A1050 O 116.1 78.8 86.3 155.7 78.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 709 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Poly-Saccharide residues GLC A REMARK 800 701 through GLC A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Poly-Saccharide residues GLC A REMARK 800 703 through GLC A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Poly-Saccharide residues GLC A REMARK 800 705 through GLC A 706 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5WVQ RELATED DB: PDB REMARK 900 RELATED ID: 5WVS RELATED DB: PDB REMARK 900 RELATED ID: 5WVT RELATED DB: PDB REMARK 900 RELATED ID: 5WW1 RELATED DB: PDB REMARK 900 RELATED ID: 5WW2 RELATED DB: PDB REMARK 900 RELATED ID: 5WWB RELATED DB: PDB DBREF1 5WWA A 24 698 UNP A0A0C5GWS2_9BACL DBREF2 5WWA A A0A0C5GWS2 1 675 SEQADV 5WWA MET A 1 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA GLY A 2 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA SER A 3 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA SER A 4 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA HIS A 5 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA HIS A 6 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA HIS A 7 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA HIS A 8 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA HIS A 9 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA HIS A 10 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA SER A 11 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA SER A 12 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA GLY A 13 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA LEU A 14 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA VAL A 15 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA PRO A 16 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA ARG A 17 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA GLY A 18 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA SER A 19 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA HIS A 20 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA MET A 21 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA ALA A 22 UNP A0A0C5GWS EXPRESSION TAG SEQADV 5WWA SER A 23 UNP A0A0C5GWS EXPRESSION TAG SEQRES 1 A 698 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 698 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET LEU SER SEQRES 3 A 698 VAL GLN LYS GLU PHE HIS GLY THR ILE ASP TYR GLY ASP SEQRES 4 A 698 VAL THR VAL THR GLY GLY ILE SER VAL PHE ASP ALA LYS SEQRES 5 A 698 PHE ASP GLU LEU TYR VAL TYR ASP GLY ASP ASP LEU GLY SEQRES 6 A 698 ALA VAL TYR ALA PRO GLU GLU THR ARG PHE ARG LEU TRP SEQRES 7 A 698 ALA PRO THR ALA SER GLU ALA PHE VAL VAL LEU TYR GLU SEQRES 8 A 698 THR GLU ASP GLY MET PRO VAL LYS GLU LEU PRO MET LYS SEQRES 9 A 698 ARG ASP VAL GLN GLY THR TRP THR LEU THR VAL ALA GLU SEQRES 10 A 698 ASP CYS GLY GLY LEU PHE TYR THR TYR ARG VAL LYS VAL SEQRES 11 A 698 GLY GLU GLN TRP ASN GLU ALA VAL ASP PRO TYR ALA LYS SEQRES 12 A 698 ALA VAL GLY VAL ASN GLY THR LYS THR ALA ILE LEU ASP SEQRES 13 A 698 LEU ARG SER THR ASN PRO GLU GLY TRP GLU ASN ASP GLN SEQRES 14 A 698 LYS PRO PRO LEU ALA SER PRO THR ASP ALA VAL ILE TYR SEQRES 15 A 698 GLU LEU HIS VAL ARG ASP LEU SER ILE HIS PRO GLN SER SEQRES 16 A 698 GLY ILE ARG GLU LYS GLY LYS PHE LEU GLY LEU THR GLU SEQRES 17 A 698 GLU GLY THR ARG GLY PRO ASN GLY ILE PRO THR GLY LEU SEQRES 18 A 698 ASP HIS ILE THR GLY LEU GLY VAL THR HIS VAL GLN LEU SEQRES 19 A 698 LEU PRO ILE TYR ASP TYR SER GLN GLU SER VAL ASP GLU SEQRES 20 A 698 SER ARG LEU ASP GLU PRO HIS TYR ASN TRP GLY TYR ASP SEQRES 21 A 698 PRO GLN ASN TYR ASN VAL PRO GLU GLY SER TYR SER THR SEQRES 22 A 698 ASP PRO HIS ASN PRO ALA ALA ARG ILE LEU GLU LEU LYS SEQRES 23 A 698 ARG LEU ILE GLN LYS LEU HIS ALA ARG GLY LEU ARG VAL SEQRES 24 A 698 ILE MET ASP VAL VAL TYR ASN HIS VAL TYR ASP GLY TYR SEQRES 25 A 698 LEU ILE HIS PHE THR LYS LEU VAL PRO GLY TYR TYR LEU SEQRES 26 A 698 ARG TYR LYS ALA ASP ARG THR PHE SER ASP GLY THR PHE SEQRES 27 A 698 CYS GLY ASN GLU CYS ALA SER GLU ARG PRO ILE MET ARG SEQRES 28 A 698 LYS TYR ILE ILE GLU SER ILE LEU HIS TRP VAL ARG GLU SEQRES 29 A 698 TYR HIS ILE ASP GLY PHE ARG PHE ASP LEU MET GLY MET SEQRES 30 A 698 ILE ASP ILE GLU THR MET ASN GLU ILE ARG ARG ARG LEU SEQRES 31 A 698 ASP GLU ILE ASP PRO THR ILE LEU THR ILE GLY GLU GLY SEQRES 32 A 698 TRP MET MET GLU THR VAL LEU PRO LYS GLU LEU ARG ALA SEQRES 33 A 698 ASN GLN ASP ASN ALA GLU LYS LEU PRO GLY ILE GLY MET SEQRES 34 A 698 PHE ASN ASP GLY MET ARG ASP ALA VAL LYS GLY ASP ILE SEQRES 35 A 698 PHE ILE PHE ASP ARG LYS GLY PHE ILE SER GLY GLY ASP SEQRES 36 A 698 GLY PHE GLU ASP GLY VAL LYS ARG GLY VAL ALA GLY GLY SEQRES 37 A 698 ILE ASN TYR GLY GLY GLN LEU ARG GLN PHE ALA VAL GLU SEQRES 38 A 698 PRO VAL GLN SER VAL ASN TYR VAL GLU CYS HIS ASP ASN SEQRES 39 A 698 HIS THR LEU TRP ASP LYS ILE GLU LEU SER THR PRO GLY SEQRES 40 A 698 ALA SER ASP GLU GLU ARG ARG ALA MET HIS ARG LEU ALA SEQRES 41 A 698 SER ALA ILE VAL LEU THR SER GLN GLY ILE PRO PHE LEU SEQRES 42 A 698 HIS ALA GLY GLN GLU PHE MET ARG THR LYS GLY GLY VAL SEQRES 43 A 698 GLU ASN SER TYR LYS SER PRO ILE GLU VAL ASN TRP LEU SEQRES 44 A 698 ASP TRP GLU ARG CYS ALA ALA HIS GLN ASP ASP VAL SER SEQRES 45 A 698 TYR MET ARG SER LEU ILE ALA LEU ARG LYS ALA HIS PRO SEQRES 46 A 698 ALA PHE ARG LEU LYS THR ALA ASP GLU ILE ARG ALA HIS SEQRES 47 A 698 LEU ARG PHE GLU ALA ALA PRO PRO HIS THR VAL ALA PHE SEQRES 48 A 698 THR LEU ARG ASP HIS ALA GLY GLY ASP PRO ASP ARG HIS SEQRES 49 A 698 LEU TYR VAL LEU TYR ASN ALA ASN PRO GLY ALA LEU SER SEQRES 50 A 698 LEU GLU LEU PRO ALA LEU GLY PRO TRP GLU VAL ARG PHE SEQRES 51 A 698 GLY GLY GLU HIS VAL LEU ALA LEU GLU ALA GLY ALA SER SEQRES 52 A 698 GLY GLU ALA ALA ALA ALA ALA PRO ALA ALA ALA GLY GLY SEQRES 53 A 698 PRO PRO ALA GLY GLY ALA ARG LEU GLU VAL ARG GLY VAL SEQRES 54 A 698 GLY VAL VAL VAL LEU ALA VAL PRO ARG HET GLC A 701 12 HET GLC A 702 11 HET GLC A 703 12 HET GLC A 704 11 HET GLC A 705 11 HET GLC A 706 12 HET CA A 707 1 HET CL A 708 1 HET CL A 709 1 HETNAM GLC ALPHA-D-GLUCOSE HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION FORMUL 2 GLC 6(C6 H12 O6) FORMUL 5 CA CA 2+ FORMUL 6 CL 2(CL 1-) FORMUL 8 HOH *439(H2 O) HELIX 1 AA1 ASP A 39 GLY A 44 5 6 HELIX 2 AA2 ASP A 50 LEU A 56 5 7 HELIX 3 AA3 GLY A 146 THR A 150 5 5 HELIX 4 AA4 ASP A 156 ASN A 161 5 6 HELIX 5 AA5 GLY A 164 ASP A 168 5 5 HELIX 6 AA6 SER A 175 ALA A 179 5 5 HELIX 7 AA7 HIS A 185 ILE A 191 1 7 HELIX 8 AA8 LYS A 202 THR A 207 5 6 HELIX 9 AA9 GLY A 213 ILE A 217 5 5 HELIX 10 AB1 THR A 219 LEU A 227 1 9 HELIX 11 AB2 ASN A 277 ARG A 295 1 19 HELIX 12 AB3 ILE A 314 VAL A 320 1 7 HELIX 13 AB4 ARG A 347 HIS A 366 1 20 HELIX 14 AB5 LEU A 374 ILE A 378 5 5 HELIX 15 AB6 ASP A 379 ASP A 394 1 16 HELIX 16 AB7 PRO A 411 ARG A 415 5 5 HELIX 17 AB8 ASN A 417 LEU A 424 5 8 HELIX 18 AB9 ASN A 431 GLY A 440 1 10 HELIX 19 AC1 PHE A 457 ALA A 466 1 10 HELIX 20 AC2 GLU A 481 VAL A 483 5 3 HELIX 21 AC3 THR A 496 THR A 505 1 10 HELIX 22 AC4 SER A 509 THR A 526 1 18 HELIX 23 AC5 GLY A 536 MET A 540 5 5 HELIX 24 AC6 PRO A 553 TRP A 558 1 6 HELIX 25 AC7 ASP A 560 ALA A 566 1 7 HELIX 26 AC8 HIS A 567 HIS A 584 1 18 HELIX 27 AC9 PRO A 585 LEU A 589 5 5 HELIX 28 AD1 THR A 591 HIS A 598 1 8 HELIX 29 AD2 HIS A 616 ASP A 620 5 5 HELIX 30 AD3 GLY A 651 GLU A 653 5 3 SHEET 1 AA1 4 GLY A 65 TYR A 68 0 SHEET 2 AA1 4 THR A 73 TRP A 78 -1 O ARG A 76 N GLY A 65 SHEET 3 AA1 4 THR A 110 VAL A 115 -1 O LEU A 113 N PHE A 75 SHEET 4 AA1 4 LYS A 104 ARG A 105 -1 N LYS A 104 O THR A 112 SHEET 1 AA2 4 PRO A 97 PRO A 102 0 SHEET 2 AA2 4 ALA A 82 TYR A 90 -1 N VAL A 87 O LEU A 101 SHEET 3 AA2 4 PHE A 123 VAL A 130 -1 O PHE A 123 N TYR A 90 SHEET 4 AA2 4 GLN A 133 ALA A 137 -1 O ALA A 137 N TYR A 126 SHEET 1 AA3 4 PRO A 97 PRO A 102 0 SHEET 2 AA3 4 ALA A 82 TYR A 90 -1 N VAL A 87 O LEU A 101 SHEET 3 AA3 4 PHE A 123 VAL A 130 -1 O PHE A 123 N TYR A 90 SHEET 4 AA3 4 THR A 152 ALA A 153 -1 O THR A 152 N TYR A 124 SHEET 1 AA4 9 ILE A 181 LEU A 184 0 SHEET 2 AA4 9 HIS A 231 LEU A 234 1 O GLN A 233 N LEU A 184 SHEET 3 AA4 9 ARG A 298 VAL A 303 1 O ILE A 300 N VAL A 232 SHEET 4 AA4 9 GLY A 369 PHE A 372 1 O ARG A 371 N VAL A 303 SHEET 5 AA4 9 LEU A 398 GLY A 401 1 O ILE A 400 N PHE A 372 SHEET 6 AA4 9 GLY A 428 PHE A 430 1 O GLY A 428 N THR A 399 SHEET 7 AA4 9 SER A 485 ASN A 487 1 O VAL A 486 N MET A 429 SHEET 8 AA4 9 ILE A 530 HIS A 534 1 O ILE A 530 N SER A 485 SHEET 9 AA4 9 ILE A 181 LEU A 184 1 N ILE A 181 O LEU A 533 SHEET 1 AA5 2 TYR A 238 TYR A 240 0 SHEET 2 AA5 2 PRO A 261 PRO A 267 -1 O VAL A 266 N ASP A 239 SHEET 1 AA6 5 LEU A 599 PHE A 601 0 SHEET 2 AA6 5 THR A 608 ARG A 614 -1 O THR A 612 N ARG A 600 SHEET 3 AA6 5 HIS A 624 ASN A 630 -1 O TYR A 629 N VAL A 609 SHEET 4 AA6 5 GLY A 690 VAL A 696 -1 O LEU A 694 N TYR A 626 SHEET 5 AA6 5 GLU A 647 PHE A 650 -1 N ARG A 649 O VAL A 693 SHEET 1 AA7 3 ALA A 635 GLU A 639 0 SHEET 2 AA7 3 ARG A 683 ARG A 687 -1 O LEU A 684 N LEU A 638 SHEET 3 AA7 3 VAL A 655 GLU A 659 -1 N GLU A 659 O ARG A 683 LINK OD1 ASP A 239 CA CA A 707 1555 1555 2.34 LINK O TYR A 240 CA CA A 707 1555 1555 2.28 LINK OE1 GLU A 247 CA CA A 707 1555 1555 2.50 LINK OE1 GLU A 268 CA CA A 707 1555 1555 2.66 LINK O4 GLC A 701 C1 GLC A 702 1555 1555 1.49 LINK C1 GLC A 705 O4 GLC A 706 1555 1555 1.44 LINK C1 GLC A 704 O4 GLC A 703 1555 1555 1.65 LINK CA CA A 707 O HOH A 865 1555 1555 2.53 LINK CA CA A 707 O HOH A1050 1555 1555 2.37 SITE 1 AC1 6 ASP A 239 TYR A 240 GLU A 247 GLU A 268 SITE 2 AC1 6 HOH A 865 HOH A1050 SITE 1 AC2 4 MET A 405 LYS A 412 ARG A 415 ASN A 417 SITE 1 AC3 4 ARG A 187 LYS A 202 HIS A 254 SER A 270 SITE 1 AC4 7 ASP A 432 ARG A 435 ASN A 494 GLC A 703 SITE 2 AC4 7 HOH A 818 HOH A 823 HOH A 848 SITE 1 AC5 11 TRP A 257 TYR A 259 ASP A 260 HIS A 307 SITE 2 AC5 11 ASP A 373 GLU A 402 HIS A 492 ASN A 548 SITE 3 AC5 11 GLC A 702 HOH A 952 HOH A1073 SITE 1 AC6 9 ARG A 518 ASP A 569 SER A 572 SER A 576 SITE 2 AC6 9 GLY A 651 GLY A 652 GLU A 653 HOH A 991 SITE 3 AC6 9 HOH A1056 CRYST1 50.757 98.517 141.824 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019702 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010151 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007051 0.00000