HEADER RIBOSOMAL PROTEIN, NUCLEAR PROTEIN 10-JAN-17 5WY3 TITLE CRYSTAL STRUCTURE OF CHAETOMIUM THERMOPHILUM UTP10 MIDDLE DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 472-872; COMPND 5 SYNONYM: UTP10; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM VAR. THERMOPHILUM DSM SOURCE 3 1495; SOURCE 4 ORGANISM_TAXID: 759272; SOURCE 5 STRAIN: DSM 1495; SOURCE 6 GENE: CTHT_0024640; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOLAR PROTEIN, COMPONENTS OF 90S PRERIBOSOME, RIBOSOMAL PROTEIN, KEYWDS 2 NUCLEAR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.CHEN,X.ZHU,K.YE REVDAT 3 20-MAR-24 5WY3 1 REMARK REVDAT 2 30-AUG-17 5WY3 1 REMARK REVDAT 1 28-JUN-17 5WY3 0 JRNL AUTH Q.SUN,X.ZHU,J.QI,W.AN,P.LAN,D.TAN,R.CHEN,B.WANG,S.ZHENG, JRNL AUTH 2 C.ZHANG,X.CHEN,W.ZHANG,J.CHEN,M.Q.DONG,K.YE JRNL TITL MOLECULAR ARCHITECTURE OF THE 90S SMALL SUBUNIT PRE-RIBOSOME JRNL REF ELIFE V. 6 2017 JRNL REFN ESSN 2050-084X JRNL PMID 28244370 JRNL DOI 10.7554/ELIFE.22086 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11RC1_2513: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 23684 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.430 REMARK 3 FREE R VALUE TEST SET COUNT : 1997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9474 - 7.5775 1.00 1743 160 0.1752 0.1988 REMARK 3 2 7.5775 - 6.0702 1.00 1620 150 0.2400 0.2828 REMARK 3 3 6.0702 - 5.3195 1.00 1603 148 0.2539 0.2871 REMARK 3 4 5.3195 - 4.8408 1.00 1565 144 0.2152 0.2563 REMARK 3 5 4.8408 - 4.4981 1.00 1555 143 0.2090 0.2249 REMARK 3 6 4.4981 - 4.2355 1.00 1539 142 0.2065 0.2832 REMARK 3 7 4.2355 - 4.0252 1.00 1538 143 0.2156 0.2886 REMARK 3 8 4.0252 - 3.8513 1.00 1514 139 0.2390 0.3082 REMARK 3 9 3.8513 - 3.7040 1.00 1520 140 0.2576 0.3558 REMARK 3 10 3.7040 - 3.5770 1.00 1503 138 0.2844 0.3677 REMARK 3 11 3.5770 - 3.4657 0.99 1507 139 0.2867 0.3297 REMARK 3 12 3.4657 - 3.3671 0.99 1478 136 0.2928 0.3346 REMARK 3 13 3.3671 - 3.2789 0.99 1490 137 0.3087 0.3273 REMARK 3 14 3.2789 - 3.1992 0.99 1512 138 0.3272 0.3984 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 121.9 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 117.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 5745 REMARK 3 ANGLE : 1.397 7809 REMARK 3 CHIRALITY : 0.067 940 REMARK 3 PLANARITY : 0.009 983 REMARK 3 DIHEDRAL : 7.456 3512 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 17:402) REMARK 3 SELECTION : (CHAIN B AND (RESID 17:151 OR RESID REMARK 3 161:213 OR RESID 229:402)) REMARK 3 ATOM PAIRS NUMBER : 3076 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5WY3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1300002572. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23700 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 19.947 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 20.75 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.18900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.660 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES-NA, 2.0 M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 369.83867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 184.91933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 277.37900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 92.45967 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 462.29833 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 369.83867 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 184.91933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 92.45967 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 277.37900 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 462.29833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 2 REMARK 465 SER A 3 REMARK 465 ASP A 4 REMARK 465 GLU A 5 REMARK 465 ALA A 6 REMARK 465 MET A 7 REMARK 465 THR A 8 REMARK 465 VAL A 9 REMARK 465 ARG A 10 REMARK 465 PRO A 11 REMARK 465 VAL A 12 REMARK 465 ASP A 13 REMARK 465 GLN A 14 REMARK 465 ARG A 15 REMARK 465 TYR A 152 REMARK 465 LYS A 153 REMARK 465 SER A 154 REMARK 465 LEU A 155 REMARK 465 GLU A 156 REMARK 465 LYS A 157 REMARK 465 SER A 158 REMARK 465 GLN A 159 REMARK 465 GLN A 160 REMARK 465 SER A 214 REMARK 465 SER A 215 REMARK 465 LYS A 216 REMARK 465 ASP A 217 REMARK 465 SER A 218 REMARK 465 GLU A 219 REMARK 465 ASN A 220 REMARK 465 LYS A 221 REMARK 465 ASN A 222 REMARK 465 ALA A 223 REMARK 465 ASP A 224 REMARK 465 LYS A 225 REMARK 465 ARG A 226 REMARK 465 HIS A 227 REMARK 465 LEU A 228 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 ASP B 4 REMARK 465 GLU B 5 REMARK 465 ALA B 6 REMARK 465 MET B 7 REMARK 465 THR B 8 REMARK 465 VAL B 9 REMARK 465 ARG B 10 REMARK 465 PRO B 11 REMARK 465 VAL B 12 REMARK 465 ASP B 13 REMARK 465 GLN B 14 REMARK 465 ARG B 15 REMARK 465 PRO B 16 REMARK 465 SER B 154 REMARK 465 LEU B 155 REMARK 465 GLU B 156 REMARK 465 LYS B 157 REMARK 465 SER B 158 REMARK 465 GLN B 159 REMARK 465 SER B 214 REMARK 465 SER B 215 REMARK 465 LYS B 216 REMARK 465 ASP B 217 REMARK 465 SER B 218 REMARK 465 GLU B 219 REMARK 465 ASN B 220 REMARK 465 LYS B 221 REMARK 465 ASN B 222 REMARK 465 ALA B 223 REMARK 465 ASP B 224 REMARK 465 LYS B 225 REMARK 465 ARG B 226 REMARK 465 HIS B 227 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN A 261 NH1 ARG A 271 2.13 REMARK 500 O GLU A 111 N ASP A 113 2.15 REMARK 500 OD1 ASP A 305 NH2 ARG A 332 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 280 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 LEU B 86 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 CYS B 90 CA - CB - SG ANGL. DEV. = 7.7 DEGREES REMARK 500 LEU B 285 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 73 44.02 -84.01 REMARK 500 CYS A 90 44.74 -90.61 REMARK 500 ASN A 315 54.12 -90.13 REMARK 500 SER B 79 -0.87 79.22 REMARK 500 PRO B 92 56.28 -67.08 REMARK 500 GLN B 262 40.19 -86.84 REMARK 500 ASP B 310 -5.33 -59.74 REMARK 500 ASN B 315 53.16 -94.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 71 ARG A 72 145.00 REMARK 500 HIS A 230 SER A 231 -32.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5WY4 RELATED DB: PDB DBREF 5WY3 A 2 402 UNP G0S5L1 G0S5L1_CHATD 472 872 DBREF 5WY3 B 2 402 UNP G0S5L1 G0S5L1_CHATD 472 872 SEQRES 1 A 401 PRO SER ASP GLU ALA MET THR VAL ARG PRO VAL ASP GLN SEQRES 2 A 401 ARG PRO SER LEU ASP SER THR PHE GLU ARG LEU SER LYS SEQRES 3 A 401 LEU GLN PRO THR ALA THR SER CYS LEU ALA LYS ASP SER SEQRES 4 A 401 GLU SER LEU PHE ASN ASP LEU CYS SER VAL PHE LEU SER SEQRES 5 A 401 ALA ALA VAL SER GLU SER ASP LEU GLU ARG PHE ASP ALA SEQRES 6 A 401 THR PRO VAL LEU SER ARG PRO LYS ALA PRO SER ASN SER SEQRES 7 A 401 PHE TYR LEU SER PHE TYR LEU ARG VAL TRP CYS GLY PRO SEQRES 8 A 401 TYR PRO THR LEU ALA LYS VAL ALA ALA LEU GLU ARG VAL SEQRES 9 A 401 LYS THR ARG LEU LYS GLU GLY ASP CYS VAL ASP LYS ASP SEQRES 10 A 401 PHE GLN ALA ILE PHE PRO TYR CYS ILE ALA ALA LEU SER SEQRES 11 A 401 ASP PRO ALA LYS LYS VAL ARG ARG ALA ALA ALA ASP LEU SEQRES 12 A 401 VAL ALA VAL LEU GLY SER ALA TYR LYS SER LEU GLU LYS SEQRES 13 A 401 SER GLN GLN LEU TRP ALA ALA LYS ASP LEU TYR GLY LYS SEQRES 14 A 401 THR GLY THR THR SER PRO LEU ASP LYS ASP ALA LEU LYS SEQRES 15 A 401 ALA LEU ILE ARG SER VAL LEU ILE PRO CYS LEU GLU GLU SEQRES 16 A 401 SER VAL LEU HIS GLU ASP HIS VAL VAL ALA ALA LEU VAL SEQRES 17 A 401 GLY ALA LEU GLU SER SER LYS ASP SER GLU ASN LYS ASN SEQRES 18 A 401 ALA ASP LYS ARG HIS LEU SER HIS SER ALA ARG LEU SER SEQRES 19 A 401 ILE PHE LYS PHE LEU CYS GLY HIS VAL VAL GLU THR PRO SEQRES 20 A 401 LEU LEU ALA VAL LYS LEU ARG LEU LEU ARG SER LEU ASN SEQRES 21 A 401 GLN ILE ARG ARG ILE SER GLY THR THR ARG THR ASP LEU SEQRES 22 A 401 LEU LEU PRO LEU LEU ARG TRP TRP ALA GLY LEU SER ALA SEQRES 23 A 401 ASN GLU ALA ALA GLU LEU ALA ALA GLN GLU SER VAL ASP SEQRES 24 A 401 VAL PRO ALA ILE ASP ASP ALA VAL VAL ASP VAL VAL VAL SEQRES 25 A 401 PRO ASN HIS ALA ALA GLY LEU GLU ALA PHE PHE GLN LEU SEQRES 26 A 401 VAL LYS GLU ALA ILE ARG PRO GLY LEU LEU GLN ALA ILE SEQRES 27 A 401 PHE ALA ARG ILE ALA LYS MET TRP PRO SER MET LYS SER SEQRES 28 A 401 ASP THR LYS TYR SER THR ALA LYS THR LEU PHE GLU LEU SEQRES 29 A 401 THR GLN ASP PRO LYS LEU ASN ALA GLU GLN SER ASP VAL SEQRES 30 A 401 ILE THR GLU ALA VAL GLU VAL LEU ARG LYS VAL ASP LEU SEQRES 31 A 401 THR THR ASP ILE LEU HIS TYR PHE ILE ASP SER SEQRES 1 B 401 PRO SER ASP GLU ALA MET THR VAL ARG PRO VAL ASP GLN SEQRES 2 B 401 ARG PRO SER LEU ASP SER THR PHE GLU ARG LEU SER LYS SEQRES 3 B 401 LEU GLN PRO THR ALA THR SER CYS LEU ALA LYS ASP SER SEQRES 4 B 401 GLU SER LEU PHE ASN ASP LEU CYS SER VAL PHE LEU SER SEQRES 5 B 401 ALA ALA VAL SER GLU SER ASP LEU GLU ARG PHE ASP ALA SEQRES 6 B 401 THR PRO VAL LEU SER ARG PRO LYS ALA PRO SER ASN SER SEQRES 7 B 401 PHE TYR LEU SER PHE TYR LEU ARG VAL TRP CYS GLY PRO SEQRES 8 B 401 TYR PRO THR LEU ALA LYS VAL ALA ALA LEU GLU ARG VAL SEQRES 9 B 401 LYS THR ARG LEU LYS GLU GLY ASP CYS VAL ASP LYS ASP SEQRES 10 B 401 PHE GLN ALA ILE PHE PRO TYR CYS ILE ALA ALA LEU SER SEQRES 11 B 401 ASP PRO ALA LYS LYS VAL ARG ARG ALA ALA ALA ASP LEU SEQRES 12 B 401 VAL ALA VAL LEU GLY SER ALA TYR LYS SER LEU GLU LYS SEQRES 13 B 401 SER GLN GLN LEU TRP ALA ALA LYS ASP LEU TYR GLY LYS SEQRES 14 B 401 THR GLY THR THR SER PRO LEU ASP LYS ASP ALA LEU LYS SEQRES 15 B 401 ALA LEU ILE ARG SER VAL LEU ILE PRO CYS LEU GLU GLU SEQRES 16 B 401 SER VAL LEU HIS GLU ASP HIS VAL VAL ALA ALA LEU VAL SEQRES 17 B 401 GLY ALA LEU GLU SER SER LYS ASP SER GLU ASN LYS ASN SEQRES 18 B 401 ALA ASP LYS ARG HIS LEU SER HIS SER ALA ARG LEU SER SEQRES 19 B 401 ILE PHE LYS PHE LEU CYS GLY HIS VAL VAL GLU THR PRO SEQRES 20 B 401 LEU LEU ALA VAL LYS LEU ARG LEU LEU ARG SER LEU ASN SEQRES 21 B 401 GLN ILE ARG ARG ILE SER GLY THR THR ARG THR ASP LEU SEQRES 22 B 401 LEU LEU PRO LEU LEU ARG TRP TRP ALA GLY LEU SER ALA SEQRES 23 B 401 ASN GLU ALA ALA GLU LEU ALA ALA GLN GLU SER VAL ASP SEQRES 24 B 401 VAL PRO ALA ILE ASP ASP ALA VAL VAL ASP VAL VAL VAL SEQRES 25 B 401 PRO ASN HIS ALA ALA GLY LEU GLU ALA PHE PHE GLN LEU SEQRES 26 B 401 VAL LYS GLU ALA ILE ARG PRO GLY LEU LEU GLN ALA ILE SEQRES 27 B 401 PHE ALA ARG ILE ALA LYS MET TRP PRO SER MET LYS SER SEQRES 28 B 401 ASP THR LYS TYR SER THR ALA LYS THR LEU PHE GLU LEU SEQRES 29 B 401 THR GLN ASP PRO LYS LEU ASN ALA GLU GLN SER ASP VAL SEQRES 30 B 401 ILE THR GLU ALA VAL GLU VAL LEU ARG LYS VAL ASP LEU SEQRES 31 B 401 THR THR ASP ILE LEU HIS TYR PHE ILE ASP SER HELIX 1 AA1 LEU A 18 LYS A 27 1 10 HELIX 2 AA2 SER A 40 ALA A 55 1 16 HELIX 3 AA3 SER A 57 ALA A 66 1 10 HELIX 4 AA4 SER A 79 CYS A 90 1 12 HELIX 5 AA5 PRO A 94 LYS A 110 1 17 HELIX 6 AA6 GLU A 111 VAL A 115 5 5 HELIX 7 AA7 PHE A 119 ALA A 121 5 3 HELIX 8 AA8 ILE A 122 SER A 131 1 10 HELIX 9 AA9 ALA A 134 ALA A 151 1 18 HELIX 10 AB1 ASP A 178 VAL A 189 1 12 HELIX 11 AB2 LEU A 190 PRO A 192 5 3 HELIX 12 AB3 CYS A 193 HIS A 200 1 8 HELIX 13 AB4 ASP A 202 GLU A 213 1 12 HELIX 14 AB5 SER A 231 THR A 247 1 17 HELIX 15 AB6 LEU A 249 ASN A 261 1 13 HELIX 16 AB7 ARG A 271 GLY A 284 1 14 HELIX 17 AB8 SER A 286 SER A 298 1 13 HELIX 18 AB9 ASP A 300 ASP A 310 1 11 HELIX 19 AC1 HIS A 316 GLU A 329 1 14 HELIX 20 AC2 ARG A 332 TRP A 347 1 16 HELIX 21 AC3 PRO A 348 MET A 350 5 3 HELIX 22 AC4 LYS A 351 GLN A 367 1 17 HELIX 23 AC5 ASP A 368 GLN A 375 1 8 HELIX 24 AC6 SER A 376 VAL A 389 1 14 HELIX 25 AC7 THR A 392 SER A 402 1 11 HELIX 26 AC8 LEU B 18 LYS B 27 1 10 HELIX 27 AC9 SER B 40 ALA B 55 1 16 HELIX 28 AD1 SER B 57 THR B 67 1 11 HELIX 29 AD2 PHE B 80 TRP B 89 1 10 HELIX 30 AD3 PRO B 94 LEU B 109 1 16 HELIX 31 AD4 PHE B 119 ALA B 121 5 3 HELIX 32 AD5 ILE B 122 SER B 131 1 10 HELIX 33 AD6 ALA B 134 ALA B 151 1 18 HELIX 34 AD7 ASP B 178 VAL B 189 1 12 HELIX 35 AD8 LEU B 190 PRO B 192 5 3 HELIX 36 AD9 CYS B 193 HIS B 200 1 8 HELIX 37 AE1 ASP B 202 GLU B 213 1 12 HELIX 38 AE2 SER B 229 THR B 247 1 19 HELIX 39 AE3 LEU B 249 ASN B 261 1 13 HELIX 40 AE4 ARG B 271 LEU B 285 1 15 HELIX 41 AE5 SER B 286 SER B 298 1 13 HELIX 42 AE6 ASP B 300 ASP B 310 1 11 HELIX 43 AE7 HIS B 316 GLU B 329 1 14 HELIX 44 AE8 ARG B 332 TRP B 347 1 16 HELIX 45 AE9 LYS B 351 GLN B 367 1 17 HELIX 46 AF1 ASP B 368 GLN B 375 1 8 HELIX 47 AF2 SER B 376 VAL B 389 1 14 HELIX 48 AF3 THR B 392 SER B 402 1 11 SHEET 1 AA1 2 ARG A 265 ILE A 266 0 SHEET 2 AA1 2 THR A 269 THR A 270 -1 O THR A 269 N ILE A 266 SHEET 1 AA2 2 ARG B 265 ILE B 266 0 SHEET 2 AA2 2 THR B 269 THR B 270 -1 O THR B 269 N ILE B 266 CISPEP 1 ARG A 72 PRO A 73 0 -23.18 CISPEP 2 ALA A 75 PRO A 76 0 15.03 CISPEP 3 SER B 17 LEU B 18 0 22.40 CISPEP 4 ALA B 75 PRO B 76 0 12.45 CRYST1 91.052 91.052 554.758 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010983 0.006341 0.000000 0.00000 SCALE2 0.000000 0.012682 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001803 0.00000