HEADER TRANSFERASE 31-JAN-17 5X28 TITLE CRYSTAL STRUCTURE OF EGFR 696-1022 L858R IN COMPLEX WITH SKLB(6) COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 696-1022; COMPND 5 SYNONYM: PROTO-ONCOGENE C-ERBB-1,RECEPTOR TYROSINE-PROTEIN KINASE COMPND 6 ERBB-1; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, HER1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS EGFR, L858R, SKLB, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.H.YUN REVDAT 4 20-MAR-24 5X28 1 REMARK REVDAT 3 11-APR-18 5X28 1 JRNL REVDAT 2 21-FEB-18 5X28 1 JRNL REVDAT 1 07-FEB-18 5X28 0 JRNL AUTH S.J.ZHU,P.ZHAO,J.YANG,R.MA,X.E.YAN,S.Y.YANG,J.W.YANG,C.H.YUN JRNL TITL STRUCTURAL INSIGHTS INTO DRUG DEVELOPMENT STRATEGY TARGETING JRNL TITL 2 EGFR T790M/C797S. JRNL REF ONCOTARGET V. 9 13652 2018 JRNL REFN ESSN 1949-2553 JRNL PMID 29568384 JRNL DOI 10.18632/ONCOTARGET.24113 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 10848 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.0252 - 4.6818 0.99 2642 128 0.1929 0.2370 REMARK 3 2 4.6818 - 3.7181 1.00 2600 123 0.1864 0.1976 REMARK 3 3 3.7181 - 3.2487 1.00 2561 143 0.2352 0.3087 REMARK 3 4 3.2487 - 2.9519 0.98 2525 126 0.2973 0.3511 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 2501 REMARK 3 ANGLE : 1.235 3396 REMARK 3 CHIRALITY : 0.075 386 REMARK 3 PLANARITY : 0.018 425 REMARK 3 DIHEDRAL : 21.968 933 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5X28 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1300002811. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97923 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10856 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH7.8, 40% PEG400, 0.15M REMARK 280 NACL, 5MM TRIS(2-CARBOXYETHYL)-PHOSPHINE (TCEP), VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 72.75650 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 72.75650 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 72.75650 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 72.75650 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 72.75650 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 72.75650 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 72.75650 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 72.75650 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 72.75650 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 72.75650 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 72.75650 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 72.75650 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 72.75650 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 72.75650 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 72.75650 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 72.75650 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 72.75650 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 72.75650 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 72.75650 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 72.75650 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 72.75650 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 72.75650 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 72.75650 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 72.75650 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 72.75650 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 72.75650 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 72.75650 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 72.75650 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 72.75650 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 72.75650 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 72.75650 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 72.75650 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 72.75650 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 72.75650 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 72.75650 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 72.75650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 696 REMARK 465 LYS A 867 REMARK 465 GLU A 868 REMARK 465 TYR A 869 REMARK 465 HIS A 870 REMARK 465 ALA A 871 REMARK 465 GLU A 872 REMARK 465 GLY A 873 REMARK 465 GLY A 874 REMARK 465 LYS A 875 REMARK 465 THR A 993 REMARK 465 ASP A 994 REMARK 465 SER A 995 REMARK 465 ASN A 996 REMARK 465 PHE A 997 REMARK 465 GLN A 1021 REMARK 465 GLY A 1022 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 723 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 748 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 749 CG CD OE1 OE2 REMARK 470 LYS A 860 CG CD CE NZ REMARK 470 GLU A 865 CG CD OE1 OE2 REMARK 470 GLU A 866 CG CD OE1 OE2 REMARK 470 GLU A 922 CG CD OE1 OE2 REMARK 470 LYS A 960 CE NZ REMARK 470 GLU A 985 CG CD OE1 OE2 REMARK 470 ARG A 986 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 988 CG ND1 CD2 CE1 NE2 REMARK 470 SER A 991 OG REMARK 470 TYR A 998 CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A1001 CG CD1 CD2 REMARK 470 MET A1002 CG SD CE REMARK 470 ASP A1003 CG OD1 OD2 REMARK 470 GLU A1004 CG CD OE1 OE2 REMARK 470 GLU A1005 CG CD OE1 OE2 REMARK 470 ASP A1006 CG OD1 OD2 REMARK 470 GLN A1020 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 733 C - N - CD ANGL. DEV. = -13.7 DEGREES REMARK 500 PRO A 914 C - N - CD ANGL. DEV. = -17.6 DEGREES REMARK 500 PRO A 936 C - N - CD ANGL. DEV. = -15.1 DEGREES REMARK 500 PRO A 990 C - N - CD ANGL. DEV. = -16.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 722 -132.69 54.22 REMARK 500 SER A 784 -61.92 66.57 REMARK 500 ASP A 837 69.26 -158.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7XU A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5X26 RELATED DB: PDB REMARK 900 RELATED ID: 5X27 RELATED DB: PDB DBREF 5X28 A 696 1022 UNP P00533 EGFR_HUMAN 696 1022 SEQADV 5X28 ARG A 858 UNP P00533 LEU 858 ENGINEERED MUTATION SEQRES 1 A 327 GLY GLU ALA PRO ASN GLN ALA LEU LEU ARG ILE LEU LYS SEQRES 2 A 327 GLU THR GLU PHE LYS LYS ILE LYS VAL LEU GLY SER GLY SEQRES 3 A 327 ALA PHE GLY THR VAL TYR LYS GLY LEU TRP ILE PRO GLU SEQRES 4 A 327 GLY GLU LYS VAL LYS ILE PRO VAL ALA ILE LYS GLU LEU SEQRES 5 A 327 ARG GLU ALA THR SER PRO LYS ALA ASN LYS GLU ILE LEU SEQRES 6 A 327 ASP GLU ALA TYR VAL MET ALA SER VAL ASP ASN PRO HIS SEQRES 7 A 327 VAL CYS ARG LEU LEU GLY ILE CYS LEU THR SER THR VAL SEQRES 8 A 327 GLN LEU ILE THR GLN LEU MET PRO PHE GLY CYS LEU LEU SEQRES 9 A 327 ASP TYR VAL ARG GLU HIS LYS ASP ASN ILE GLY SER GLN SEQRES 10 A 327 TYR LEU LEU ASN TRP CYS VAL GLN ILE ALA LYS GLY MET SEQRES 11 A 327 ASN TYR LEU GLU ASP ARG ARG LEU VAL HIS ARG ASP LEU SEQRES 12 A 327 ALA ALA ARG ASN VAL LEU VAL LYS THR PRO GLN HIS VAL SEQRES 13 A 327 LYS ILE THR ASP PHE GLY ARG ALA LYS LEU LEU GLY ALA SEQRES 14 A 327 GLU GLU LYS GLU TYR HIS ALA GLU GLY GLY LYS VAL PRO SEQRES 15 A 327 ILE LYS TRP MET ALA LEU GLU SER ILE LEU HIS ARG ILE SEQRES 16 A 327 TYR THR HIS GLN SER ASP VAL TRP SER TYR GLY VAL THR SEQRES 17 A 327 VAL TRP GLU LEU MET THR PHE GLY SER LYS PRO TYR ASP SEQRES 18 A 327 GLY ILE PRO ALA SER GLU ILE SER SER ILE LEU GLU LYS SEQRES 19 A 327 GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS THR ILE ASP SEQRES 20 A 327 VAL TYR MET ILE MET VAL LYS CYS TRP MET ILE ASP ALA SEQRES 21 A 327 ASP SER ARG PRO LYS PHE ARG GLU LEU ILE ILE GLU PHE SEQRES 22 A 327 SER LYS MET ALA ARG ASP PRO GLN ARG TYR LEU VAL ILE SEQRES 23 A 327 GLN GLY ASP GLU ARG MET HIS LEU PRO SER PRO THR ASP SEQRES 24 A 327 SER ASN PHE TYR ARG ALA LEU MET ASP GLU GLU ASP MET SEQRES 25 A 327 ASP ASP VAL VAL ASP ALA ASP GLU TYR LEU ILE PRO GLN SEQRES 26 A 327 GLN GLY HET 7XU A1101 36 HET CL A1102 1 HETNAM 7XU 9-CYCLOHEXYL-N2-[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]-N8- HETNAM 2 7XU PHENYL-PURINE-2,8-DIAMINE HETNAM CL CHLORIDE ION FORMUL 2 7XU C28 H34 N8 FORMUL 3 CL CL 1- FORMUL 4 HOH *42(H2 O) HELIX 1 AA1 LYS A 708 THR A 710 5 3 HELIX 2 AA2 SER A 752 SER A 768 1 17 HELIX 3 AA3 CYS A 797 LYS A 806 1 10 HELIX 4 AA4 ASP A 807 ILE A 809 5 3 HELIX 5 AA5 GLY A 810 ARG A 831 1 22 HELIX 6 AA6 ALA A 839 ARG A 841 5 3 HELIX 7 AA7 ASP A 855 ALA A 859 5 5 HELIX 8 AA8 ALA A 882 ARG A 889 1 8 HELIX 9 AA9 THR A 892 THR A 909 1 18 HELIX 10 AB1 PRO A 919 GLY A 930 1 12 HELIX 11 AB2 THR A 940 TRP A 951 1 12 HELIX 12 AB3 ASP A 954 ARG A 958 5 5 HELIX 13 AB4 LYS A 960 ASP A 974 1 15 HELIX 14 AB5 ASP A 974 LEU A 979 1 6 HELIX 15 AB6 ASP A 1012 TYR A 1016 5 5 SHEET 1 AA1 5 PHE A 712 GLY A 721 0 SHEET 2 AA1 5 GLY A 724 TRP A 731 -1 O VAL A 726 N GLY A 719 SHEET 3 AA1 5 ILE A 740 LEU A 747 -1 O ILE A 740 N TRP A 731 SHEET 4 AA1 5 GLN A 787 GLN A 791 -1 O THR A 790 N ALA A 743 SHEET 5 AA1 5 LEU A 777 CYS A 781 -1 N LEU A 778 O ILE A 789 SHEET 1 AA2 2 LEU A 833 VAL A 834 0 SHEET 2 AA2 2 LYS A 860 LEU A 861 -1 O LYS A 860 N VAL A 834 SHEET 1 AA3 2 VAL A 843 VAL A 845 0 SHEET 2 AA3 2 VAL A 851 ILE A 853 -1 O LYS A 852 N LEU A 844 SITE 1 AC1 11 LEU A 718 ALA A 743 MET A 766 THR A 790 SITE 2 AC1 11 MET A 793 PRO A 794 GLY A 796 GLU A 804 SITE 3 AC1 11 LEU A 844 HOH A1207 HOH A1215 SITE 1 AC2 1 ILE A 878 CRYST1 145.513 145.513 145.513 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006872 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006872 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006872 0.00000 TER 2411 GLN A1020 HETATM 2412 C4 7XU A1101 -52.661 0.144 -21.893 1.00 60.00 C HETATM 2413 C5 7XU A1101 -53.614 0.789 -22.647 1.00 58.05 C HETATM 2414 C6 7XU A1101 -54.585 1.515 -22.009 1.00 56.76 C HETATM 2415 C8 7XU A1101 -52.303 -0.209 -23.971 1.00 63.68 C HETATM 2416 N1 7XU A1101 -54.572 1.571 -20.707 1.00 54.15 N HETATM 2417 N2 7XU A1101 -53.737 1.065 -18.690 1.00 60.17 N HETATM 2418 N3 7XU A1101 -52.689 0.228 -20.565 1.00 58.58 N HETATM 2419 CAS 7XU A1101 -49.191 -1.644 -15.092 1.00 78.54 C HETATM 2420 CAQ 7XU A1101 -49.439 -2.567 -13.908 1.00 85.01 C HETATM 2421 NBH 7XU A1101 -49.394 -1.818 -12.649 1.00 87.94 N HETATM 2422 CAA 7XU A1101 -49.705 -2.731 -11.549 1.00 89.00 C HETATM 2423 CAR 7XU A1101 -50.395 -0.754 -12.621 1.00 84.26 C HETATM 2424 CAT 7XU A1101 -50.050 0.249 -13.699 1.00 76.70 C HETATM 2425 NBI 7XU A1101 -50.074 -0.485 -14.955 1.00 78.20 N HETATM 2426 CBB 7XU A1101 -50.981 -0.116 -15.940 1.00 73.23 C HETATM 2427 CAJ 7XU A1101 -51.974 0.777 -15.602 1.00 69.15 C HETATM 2428 CAH 7XU A1101 -52.894 1.163 -16.551 1.00 62.25 C HETATM 2429 CAI 7XU A1101 -50.913 -0.624 -17.226 1.00 67.66 C HETATM 2430 CAG 7XU A1101 -51.840 -0.232 -18.182 1.00 61.53 C HETATM 2431 CBA 7XU A1101 -52.827 0.663 -17.834 1.00 62.20 C HETATM 2432 C2 7XU A1101 -53.647 0.945 -19.991 1.00 57.33 C HETATM 2433 N7 7XU A1101 -53.373 0.552 -23.928 1.00 60.67 N HETATM 2434 N9 7XU A1101 -51.886 -0.462 -22.760 1.00 65.82 N HETATM 2435 CBG 7XU A1101 -50.708 -1.259 -22.476 1.00 70.77 C HETATM 2436 CAO 7XU A1101 -51.029 -2.735 -22.431 1.00 71.10 C HETATM 2437 CAM 7XU A1101 -49.724 -3.496 -22.253 1.00 76.19 C HETATM 2438 CAL 7XU A1101 -49.013 -3.049 -20.980 1.00 65.57 C HETATM 2439 CAN 7XU A1101 -48.803 -1.546 -20.962 1.00 62.80 C HETATM 2440 CAP 7XU A1101 -50.123 -0.836 -21.146 1.00 67.86 C HETATM 2441 NAY 7XU A1101 -51.725 -0.682 -25.050 1.00 62.02 N HETATM 2442 CAZ 7XU A1101 -52.046 -0.244 -26.249 1.00 61.48 C HETATM 2443 CAE 7XU A1101 -52.214 1.103 -26.478 1.00 63.65 C HETATM 2444 CAC 7XU A1101 -52.542 1.554 -27.744 1.00 65.36 C HETATM 2445 CAB 7XU A1101 -52.703 0.655 -28.779 1.00 64.21 C HETATM 2446 CAD 7XU A1101 -52.537 -0.695 -28.542 1.00 66.14 C HETATM 2447 CAF 7XU A1101 -52.205 -1.144 -27.279 1.00 66.36 C HETATM 2448 CL CL A1102 -47.118 -19.130 -24.872 1.00 82.37 CL HETATM 2449 O HOH A1201 -56.197 -29.958 -41.488 1.00 78.10 O HETATM 2450 O HOH A1202 -49.532 13.201 -36.660 1.00 77.09 O HETATM 2451 O HOH A1203 -73.636 -30.139 -22.610 1.00 74.72 O HETATM 2452 O HOH A1204 -53.423 -24.457 -26.482 1.00 60.69 O HETATM 2453 O HOH A1205 -54.216 -4.485 -13.679 1.00 63.33 O HETATM 2454 O HOH A1206 -54.178 -3.403 -30.482 1.00 63.13 O HETATM 2455 O HOH A1207 -51.417 -3.540 -26.674 1.00 77.77 O HETATM 2456 O HOH A1208 -59.742 7.728 -21.600 1.00 59.67 O HETATM 2457 O HOH A1209 -45.592 4.334 -14.980 1.00 82.03 O HETATM 2458 O HOH A1210 -62.689 7.216 -32.768 1.00 50.53 O HETATM 2459 O HOH A1211 -54.731 -9.533 -32.261 1.00 55.30 O HETATM 2460 O HOH A1212 -58.183 1.670 -24.824 1.00 48.86 O HETATM 2461 O HOH A1213 -57.842 -15.709 -29.812 1.00 63.55 O HETATM 2462 O HOH A1214 -52.840 -15.267 -26.737 1.00 66.18 O HETATM 2463 O HOH A1215 -55.496 -0.474 -25.158 1.00 59.31 O HETATM 2464 O HOH A1216 -63.101 -0.835 -47.142 1.00 48.45 O HETATM 2465 O HOH A1217 -54.890 2.314 -9.694 1.00 56.91 O HETATM 2466 O HOH A1218 -57.252 -27.547 -21.985 1.00 61.56 O HETATM 2467 O HOH A1219 -46.411 -38.259 -24.344 1.00 76.49 O HETATM 2468 O HOH A1220 -73.145 -13.400 -33.614 1.00 66.52 O HETATM 2469 O HOH A1221 -52.549 -13.994 -20.825 1.00 62.84 O HETATM 2470 O HOH A1222 -59.861 -21.729 -8.860 1.00 52.06 O HETATM 2471 O HOH A1223 -76.435 -22.240 -16.489 1.00 49.39 O HETATM 2472 O HOH A1224 -47.593 -15.558 -10.793 1.00 57.09 O HETATM 2473 O HOH A1225 -75.578 -9.921 -16.741 1.00 55.36 O HETATM 2474 O HOH A1226 -66.521 -3.167 -42.819 1.00 48.79 O HETATM 2475 O HOH A1227 -79.093 -23.522 -15.461 1.00 68.28 O HETATM 2476 O HOH A1228 -71.689 -20.381 -1.930 1.00 55.39 O HETATM 2477 O HOH A1229 -72.533 -28.158 -19.171 1.00 58.70 O HETATM 2478 O HOH A1230 -73.030 -25.099 -18.695 1.00 60.55 O HETATM 2479 O HOH A1231 -45.360 -3.564 -25.089 1.00 80.18 O HETATM 2480 O HOH A1232 -64.610 16.687 -33.793 1.00 64.12 O HETATM 2481 O HOH A1233 -49.134 -30.785 -39.940 1.00 65.20 O HETATM 2482 O HOH A1234 -49.339 -13.687 -7.718 1.00 70.55 O HETATM 2483 O HOH A1235 -62.689 16.694 -36.109 1.00 61.60 O HETATM 2484 O HOH A1236 -54.574 -23.789 -9.802 1.00 52.27 O HETATM 2485 O HOH A1237 -72.816 -5.257 -35.870 1.00 67.07 O HETATM 2486 O HOH A1238 -76.964 -25.204 -16.721 1.00 68.12 O HETATM 2487 O HOH A1239 -55.023 -5.987 -41.219 1.00 58.89 O HETATM 2488 O HOH A1240 -62.165 -4.696 -40.579 1.00 61.22 O HETATM 2489 O HOH A1241 -55.952 -4.214 -43.074 1.00 60.15 O HETATM 2490 O HOH A1242 -40.943 11.075 -19.972 1.00 71.54 O CONECT 2412 2413 2418 2434 CONECT 2413 2412 2414 2433 CONECT 2414 2413 2416 CONECT 2415 2433 2434 2441 CONECT 2416 2414 2432 CONECT 2417 2431 2432 CONECT 2418 2412 2432 CONECT 2419 2420 2425 CONECT 2420 2419 2421 CONECT 2421 2420 2422 2423 CONECT 2422 2421 CONECT 2423 2421 2424 CONECT 2424 2423 2425 CONECT 2425 2419 2424 2426 CONECT 2426 2425 2427 2429 CONECT 2427 2426 2428 CONECT 2428 2427 2431 CONECT 2429 2426 2430 CONECT 2430 2429 2431 CONECT 2431 2417 2428 2430 CONECT 2432 2416 2417 2418 CONECT 2433 2413 2415 CONECT 2434 2412 2415 2435 CONECT 2435 2434 2436 2440 CONECT 2436 2435 2437 CONECT 2437 2436 2438 CONECT 2438 2437 2439 CONECT 2439 2438 2440 CONECT 2440 2435 2439 CONECT 2441 2415 2442 CONECT 2442 2441 2443 2447 CONECT 2443 2442 2444 CONECT 2444 2443 2445 CONECT 2445 2444 2446 CONECT 2446 2445 2447 CONECT 2447 2442 2446 MASTER 376 0 2 15 9 0 4 6 2489 1 36 26 END