HEADER MEMBRANE PROTEIN 03-FEB-17 5X33 TITLE LEUKOTRIENE B4 RECEPTOR BLT1 IN COMPLEX WITH BIIL260 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LTB4 RECEPTOR,LYSOZYME,LTB4 RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LEUKOTRIENE B4 RECEPTOR; COMPND 5 EC: 3.2.1.17; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: CHIMERA PROTEIN OF UNP RESIDUES 15-213 FROM Q9WTK1, COMPND 9 UNP RESIDUES 2-161 FROM A0A097J792, UNP RESIDUES 214-348 FROM Q9WTK1. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAVIA PORCELLUS, ENTEROBACTERIA PHAGE RB55; SOURCE 3 ORGANISM_COMMON: GUINEA PIG; SOURCE 4 ORGANISM_TAXID: 10141, 697289; SOURCE 5 GENE: LTB4R, E, RB55_P125; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS CBS 7435; SOURCE 7 EXPRESSION_SYSTEM_COMMON: PICHIA PASTORIS; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS HELIX, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.HORI,K.HIRATA,K.YAMASHITA,Y.KAWANO,M.YAMAMOTO,S.YOKOYAMA REVDAT 4 22-NOV-23 5X33 1 REMARK REVDAT 3 04-APR-18 5X33 1 JRNL REVDAT 2 07-FEB-18 5X33 1 JRNL REVDAT 1 03-JAN-18 5X33 0 JRNL AUTH T.HORI,T.OKUNO,K.HIRATA,K.YAMASHITA,Y.KAWANO,M.YAMAMOTO, JRNL AUTH 2 M.HATO,M.NAKAMURA,T.SHIMIZU,T.YOKOMIZO,M.MIYANO,S.YOKOYAMA JRNL TITL NA+-MIMICKING LIGANDS STABILIZE THE INACTIVE STATE OF JRNL TITL 2 LEUKOTRIENE B4RECEPTOR BLT1. JRNL REF NAT. CHEM. BIOL. V. 14 262 2018 JRNL REFN ESSN 1552-4469 JRNL PMID 29309055 JRNL DOI 10.1038/NCHEMBIO.2547 REMARK 2 REMARK 2 RESOLUTION. 3.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 8262 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 414 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.5434 - 5.3350 1.00 2712 143 0.2404 0.2816 REMARK 3 2 5.3350 - 4.2353 1.00 2594 137 0.2375 0.2664 REMARK 3 3 4.2353 - 3.7002 1.00 2542 134 0.2745 0.3533 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3448 REMARK 3 ANGLE : 0.801 4693 REMARK 3 CHIRALITY : 0.042 556 REMARK 3 PLANARITY : 0.007 580 REMARK 3 DIHEDRAL : 15.004 2015 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): 101.9104 183.8565 283.8529 REMARK 3 T TENSOR REMARK 3 T11: 0.0138 T22: 0.8497 REMARK 3 T33: 1.0676 T12: -0.1505 REMARK 3 T13: 0.0214 T23: 0.0277 REMARK 3 L TENSOR REMARK 3 L11: 2.4200 L22: 1.4328 REMARK 3 L33: 1.4670 L12: 0.6852 REMARK 3 L13: -1.0673 L23: -0.0161 REMARK 3 S TENSOR REMARK 3 S11: 0.0295 S12: 0.2746 S13: -0.5560 REMARK 3 S21: -0.4465 S22: 0.0836 S23: 0.2806 REMARK 3 S31: 0.0671 S32: -0.1825 S33: -0.0291 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 213 OR RESID 900 REMARK 3 THROUGH 1021 ) REMARK 3 ORIGIN FOR THE GROUP (A): 101.2925 183.0013 299.1973 REMARK 3 T TENSOR REMARK 3 T11: -0.0142 T22: 1.0935 REMARK 3 T33: 0.9258 T12: -0.0537 REMARK 3 T13: -0.0270 T23: 0.0508 REMARK 3 L TENSOR REMARK 3 L11: 1.6149 L22: 0.3542 REMARK 3 L33: 0.5280 L12: -0.1861 REMARK 3 L13: -0.5769 L23: -0.2662 REMARK 3 S TENSOR REMARK 3 S11: -0.0057 S12: -0.2322 S13: -0.3922 REMARK 3 S21: 0.1086 S22: -0.0609 S23: 0.1440 REMARK 3 S31: -0.1278 S32: 0.4489 S33: 0.0804 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1022 THROUGH 1136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.7894 178.9009 319.7136 REMARK 3 T TENSOR REMARK 3 T11: 0.0163 T22: 0.7631 REMARK 3 T33: 1.1421 T12: 0.1067 REMARK 3 T13: 0.0407 T23: 0.1078 REMARK 3 L TENSOR REMARK 3 L11: 0.6544 L22: 0.5786 REMARK 3 L33: 0.6353 L12: -0.1516 REMARK 3 L13: 0.0209 L23: -0.4206 REMARK 3 S TENSOR REMARK 3 S11: 0.0104 S12: -0.0477 S13: 0.4890 REMARK 3 S21: 0.1199 S22: -0.0243 S23: -0.1988 REMARK 3 S31: -0.0985 S32: -0.3008 S33: 0.0113 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1137 THROUGH 1203 OR RESID 214 REMARK 3 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.0932 168.6446 312.5627 REMARK 3 T TENSOR REMARK 3 T11: 0.2732 T22: 0.7165 REMARK 3 T33: 0.8870 T12: -0.0334 REMARK 3 T13: -0.0067 T23: -0.0518 REMARK 3 L TENSOR REMARK 3 L11: 2.5785 L22: 1.0270 REMARK 3 L33: 0.3012 L12: 0.9608 REMARK 3 L13: -0.3155 L23: -0.5250 REMARK 3 S TENSOR REMARK 3 S11: -0.0086 S12: 0.3957 S13: 0.0206 REMARK 3 S21: -0.1560 S22: 0.3848 S23: -0.0535 REMARK 3 S31: 0.0685 S32: -0.5876 S33: -0.2568 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 287 ) REMARK 3 ORIGIN FOR THE GROUP (A): 112.2995 174.5409 291.0606 REMARK 3 T TENSOR REMARK 3 T11: 0.1132 T22: 0.8846 REMARK 3 T33: 1.3744 T12: 0.0211 REMARK 3 T13: 0.1005 T23: 0.3121 REMARK 3 L TENSOR REMARK 3 L11: 0.2302 L22: 1.5231 REMARK 3 L33: 4.3493 L12: -0.5823 REMARK 3 L13: -0.4163 L23: 0.4453 REMARK 3 S TENSOR REMARK 3 S11: 0.2272 S12: 0.3327 S13: -0.3091 REMARK 3 S21: 0.1911 S22: 0.0160 S23: -0.5314 REMARK 3 S31: 0.1246 S32: 0.5083 S33: -0.0980 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2001 THROUGH 2001 ) REMARK 3 ORIGIN FOR THE GROUP (A): 114.0156 178.7942 283.4466 REMARK 3 T TENSOR REMARK 3 T11: 0.4818 T22: 1.2104 REMARK 3 T33: 1.0363 T12: 0.2284 REMARK 3 T13: 0.2370 T23: -0.1439 REMARK 3 L TENSOR REMARK 3 L11: 8.2343 L22: 0.0158 REMARK 3 L33: 0.4652 L12: 0.3754 REMARK 3 L13: 1.9573 L23: 0.0901 REMARK 3 S TENSOR REMARK 3 S11: 0.0274 S12: -0.7150 S13: 0.8858 REMARK 3 S21: -0.2159 S22: 0.1442 S23: -1.0226 REMARK 3 S31: 0.1856 S32: 0.5857 S33: -0.1578 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5X33 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1300002841. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8291 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.700 REMARK 200 RESOLUTION RANGE LOW (A) : 48.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 34.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 31.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4MBS AND 4K5Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 300, BICINE, LIPIDIC CUBIC PHASE, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.81000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.76500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.81000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 67.76500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 2 REMARK 465 LEU A 3 REMARK 465 MET A 4 REMARK 465 ASP A 5 REMARK 465 TYR A 6 REMARK 465 LYS A 7 REMARK 465 ASP A 8 REMARK 465 ASP A 9 REMARK 465 ASP A 10 REMARK 465 ASP A 11 REMARK 465 LYS A 12 REMARK 465 GLU A 13 REMARK 465 PHE A 14 REMARK 465 THR A 254 REMARK 465 LEU A 255 REMARK 465 GLY A 288 REMARK 465 GLY A 289 REMARK 465 GLY A 290 REMARK 465 LEU A 291 REMARK 465 LEU A 292 REMARK 465 ARG A 293 REMARK 465 SER A 294 REMARK 465 ALA A 295 REMARK 465 GLY A 296 REMARK 465 VAL A 297 REMARK 465 GLY A 298 REMARK 465 PHE A 299 REMARK 465 VAL A 300 REMARK 465 ALA A 301 REMARK 465 LYS A 302 REMARK 465 LEU A 303 REMARK 465 LEU A 304 REMARK 465 GLU A 305 REMARK 465 ALA A 306 REMARK 465 THR A 307 REMARK 465 GLY A 308 REMARK 465 ALA A 309 REMARK 465 GLU A 310 REMARK 465 ALA A 311 REMARK 465 PHE A 312 REMARK 465 SER A 313 REMARK 465 THR A 314 REMARK 465 ARG A 315 REMARK 465 ARG A 316 REMARK 465 GLY A 317 REMARK 465 GLY A 318 REMARK 465 THR A 319 REMARK 465 LEU A 320 REMARK 465 ALA A 321 REMARK 465 GLN A 322 REMARK 465 THR A 323 REMARK 465 VAL A 324 REMARK 465 LYS A 325 REMARK 465 GLY A 326 REMARK 465 ILE A 327 REMARK 465 PRO A 328 REMARK 465 MET A 329 REMARK 465 ALA A 330 REMARK 465 PRO A 331 REMARK 465 GLU A 332 REMARK 465 PRO A 333 REMARK 465 GLY A 334 REMARK 465 ALA A 335 REMARK 465 SER A 336 REMARK 465 GLY A 337 REMARK 465 SER A 338 REMARK 465 LEU A 339 REMARK 465 ASP A 340 REMARK 465 GLY A 341 REMARK 465 LEU A 342 REMARK 465 LYS A 343 REMARK 465 GLN A 344 REMARK 465 SER A 345 REMARK 465 GLU A 346 REMARK 465 SER A 347 REMARK 465 ASP A 348 REMARK 465 GLU A 349 REMARK 465 PHE A 350 REMARK 465 LEU A 351 REMARK 465 GLU A 352 REMARK 465 VAL A 353 REMARK 465 LEU A 354 REMARK 465 PHE A 355 REMARK 465 GLN A 356 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 ARG A 48 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 50 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 LYS A 133 CG CD CE NZ REMARK 470 ARG A 211 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1014 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1016 CG CD CE NZ REMARK 470 ASP A1020 CG OD1 OD2 REMARK 470 THR A1021 OG1 CG2 REMARK 470 GLU A1022 CG CD OE1 OE2 REMARK 470 TYR A1024 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A1043 CG CD CE NZ REMARK 470 LYS A1048 CG CD CE NZ REMARK 470 ARG A1080 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1147 CG CD CE NZ REMARK 470 ARG A 217 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 218 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 256 CG OD1 OD2 REMARK 470 GLN A 257 CG CD OE1 NE2 REMARK 470 LYS A 259 CG CD CE NZ REMARK 470 GLN A 260 CG CD OE1 NE2 REMARK 470 ASN A 264 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 35 OG1 THR A 39 2.03 REMARK 500 OG SER A 903 OE1 GLU A 1064 2.12 REMARK 500 OG SER A 1038 OD1 ASN A 1040 2.19 REMARK 500 O LEU A 149 OG1 THR A 152 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 117 -7.03 -59.11 REMARK 500 ASP A1010 -60.12 -98.92 REMARK 500 ASP A1020 -179.97 -69.13 REMARK 500 ALA A1112 -8.82 -55.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7Y9 A 2001 DBREF 5X33 A 15 213 UNP Q9WTK1 Q9WTK1_CAVPO 15 213 DBREF1 5X33 A 1002 1161 UNP A0A097J792_BPT4 DBREF2 5X33 A A0A097J792 2 161 DBREF 5X33 A 214 348 UNP Q9WTK1 Q9WTK1_CAVPO 214 348 SEQADV 5X33 GLU A 2 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 LEU A 3 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 MET A 4 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 ASP A 5 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 TYR A 6 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 LYS A 7 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 ASP A 8 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 ASP A 9 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 ASP A 10 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 ASP A 11 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 LYS A 12 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 GLU A 13 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 PHE A 14 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 GLY A 83 UNP Q9WTK1 HIS 83 ENGINEERED MUTATION SEQADV 5X33 GLY A 88 UNP Q9WTK1 LYS 88 ENGINEERED MUTATION SEQADV 5X33 ALA A 212 UNP Q9WTK1 VAL 212 ENGINEERED MUTATION SEQADV 5X33 GLY A 900 UNP Q9WTK1 LINKER SEQADV 5X33 SER A 901 UNP Q9WTK1 LINKER SEQADV 5X33 GLY A 902 UNP Q9WTK1 LINKER SEQADV 5X33 SER A 903 UNP Q9WTK1 LINKER SEQADV 5X33 THR A 1054 UNP A0A097J79 CYS 54 ENGINEERED MUTATION SEQADV 5X33 ALA A 1097 UNP A0A097J79 CYS 97 ENGINEERED MUTATION SEQADV 5X33 GLY A 1200 UNP A0A097J79 LINKER SEQADV 5X33 SER A 1201 UNP A0A097J79 LINKER SEQADV 5X33 GLY A 1202 UNP A0A097J79 LINKER SEQADV 5X33 SER A 1203 UNP A0A097J79 LINKER SEQADV 5X33 ALA A 309 UNP Q9WTK1 SER 309 ENGINEERED MUTATION SEQADV 5X33 GLU A 349 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 PHE A 350 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 LEU A 351 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 GLU A 352 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 VAL A 353 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 LEU A 354 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 PHE A 355 UNP Q9WTK1 EXPRESSION TAG SEQADV 5X33 GLN A 356 UNP Q9WTK1 EXPRESSION TAG SEQRES 1 A 523 GLU LEU MET ASP TYR LYS ASP ASP ASP ASP LYS GLU PHE SEQRES 2 A 523 SER ASN THR PHE ILE PRO LEU LEU ALA MET ILE LEU LEU SEQRES 3 A 523 SER VAL SER MET VAL VAL GLY LEU PRO GLY ASN THR PHE SEQRES 4 A 523 VAL VAL TRP SER ILE LEU LYS ARG MET ARG LYS ARG SER SEQRES 5 A 523 VAL THR ALA LEU MET VAL LEU ASN LEU ALA LEU ALA ASP SEQRES 6 A 523 LEU ALA VAL LEU LEU THR ALA PRO PHE PHE LEU HIS PHE SEQRES 7 A 523 LEU THR TRP GLY THR TRP SER PHE GLY LEU ALA GLY CYS SEQRES 8 A 523 ARG LEU CYS HIS TYR ILE CYS GLY VAL SER MET TYR ALA SEQRES 9 A 523 SER VAL LEU LEU ILE THR ALA MET SER LEU ASP ARG SER SEQRES 10 A 523 LEU ALA VAL ALA SER PRO PHE LEU SER GLN LYS VAL ARG SEQRES 11 A 523 THR LYS THR ALA ALA ARG TRP LEU LEU VAL GLY ILE TRP SEQRES 12 A 523 GLY ALA SER PHE LEU LEU ALA THR PRO VAL LEU ALA PHE SEQRES 13 A 523 ARG LYS VAL VAL LYS LEU THR ASN GLU THR ASP LEU CYS SEQRES 14 A 523 LEU ALA VAL TYR PRO SER ASP ARG HIS LYS ALA PHE HIS SEQRES 15 A 523 LEU LEU PHE GLU ALA PHE THR GLY PHE VAL VAL PRO PHE SEQRES 16 A 523 LEU ILE VAL VAL ALA SER TYR ALA ASP ILE SER ARG ARG SEQRES 17 A 523 LEU ARG ALA ARG GLY SER GLY SER ASN ILE PHE GLU MET SEQRES 18 A 523 LEU ARG ILE ASP GLU GLY LEU ARG LEU LYS ILE TYR LYS SEQRES 19 A 523 ASP THR GLU GLY TYR TYR THR ILE GLY ILE GLY HIS LEU SEQRES 20 A 523 LEU THR LYS SER PRO SER LEU ASN ALA ALA LYS SER GLU SEQRES 21 A 523 LEU ASP LYS ALA ILE GLY ARG ASN THR ASN GLY VAL ILE SEQRES 22 A 523 THR LYS ASP GLU ALA GLU LYS LEU PHE ASN GLN ASP VAL SEQRES 23 A 523 ASP ALA ALA VAL ARG GLY ILE LEU ARG ASN ALA LYS LEU SEQRES 24 A 523 LYS PRO VAL TYR ASP SER LEU ASP ALA VAL ARG ARG ALA SEQRES 25 A 523 ALA LEU ILE ASN MET VAL PHE GLN MET GLY GLU THR GLY SEQRES 26 A 523 VAL ALA GLY PHE THR ASN SER LEU ARG MET LEU GLN GLN SEQRES 27 A 523 LYS ARG TRP ASP GLU ALA ALA VAL ASN LEU ALA LYS SER SEQRES 28 A 523 ARG TRP TYR ASN GLN THR PRO ASN ARG ALA LYS ARG VAL SEQRES 29 A 523 ILE THR THR PHE ARG THR GLY THR TRP ASP ALA TYR GLY SEQRES 30 A 523 SER GLY SER ARG PHE HIS ARG ARG ARG ARG THR GLY ARG SEQRES 31 A 523 LEU VAL VAL ILE ILE ILE LEU ALA PHE ALA ALA PHE TRP SEQRES 32 A 523 LEU PRO TYR HIS VAL VAL ASP LEU VAL GLU GLY SER ARG SEQRES 33 A 523 VAL LEU ALA GLY THR LEU ASP GLN SER LYS GLN GLN LEU SEQRES 34 A 523 ARG ASN ALA ARG LYS VAL CYS ILE ALA LEU ALA PHE LEU SEQRES 35 A 523 SER SER SER VAL ASN PRO LEU LEU TYR ALA CYS ALA GLY SEQRES 36 A 523 GLY GLY LEU LEU ARG SER ALA GLY VAL GLY PHE VAL ALA SEQRES 37 A 523 LYS LEU LEU GLU ALA THR GLY ALA GLU ALA PHE SER THR SEQRES 38 A 523 ARG ARG GLY GLY THR LEU ALA GLN THR VAL LYS GLY ILE SEQRES 39 A 523 PRO MET ALA PRO GLU PRO GLY ALA SER GLY SER LEU ASP SEQRES 40 A 523 GLY LEU LYS GLN SER GLU SER ASP GLU PHE LEU GLU VAL SEQRES 41 A 523 LEU PHE GLN HET 7Y9 A2001 35 HETNAM 7Y9 4-[[3-[[4-[2-(4-HYDROXYPHENYL)PROPAN-2- HETNAM 2 7Y9 YL]PHENOXY]METHYL]PHENYL]METHOXY]BENZENECARBOXIMIDAMID HETNAM 3 7Y9 E FORMUL 2 7Y9 C30 H30 N2 O3 HELIX 1 AA1 THR A 17 ARG A 48 1 32 HELIX 2 AA2 VAL A 54 GLY A 83 1 30 HELIX 3 AA3 PHE A 87 ARG A 117 1 31 HELIX 4 AA4 SER A 118 SER A 123 1 6 HELIX 5 AA5 SER A 123 ARG A 131 1 9 HELIX 6 AA6 THR A 132 LEU A 149 1 18 HELIX 7 AA7 THR A 152 PHE A 157 1 6 HELIX 8 AA8 SER A 176 THR A 190 1 15 HELIX 9 AA9 PHE A 192 GLY A 900 1 23 HELIX 10 AB1 SER A 903 GLY A 1012 1 12 HELIX 11 AB2 SER A 1038 ALA A 1049 1 12 HELIX 12 AB3 THR A 1059 ARG A 1080 1 22 HELIX 13 AB4 LYS A 1083 LEU A 1091 1 9 HELIX 14 AB5 ASP A 1092 GLY A 1107 1 16 HELIX 15 AB6 GLY A 1107 ALA A 1112 1 6 HELIX 16 AB7 PHE A 1114 GLN A 1123 1 10 HELIX 17 AB8 TRP A 1126 VAL A 1131 1 6 HELIX 18 AB9 ASN A 1132 LYS A 1135 5 4 HELIX 19 AC1 SER A 1136 THR A 1142 1 7 HELIX 20 AC2 THR A 1142 GLY A 1156 1 15 HELIX 21 AC3 THR A 221 VAL A 226 1 6 HELIX 22 AC4 ILE A 229 ARG A 249 1 21 HELIX 23 AC5 GLN A 260 ALA A 273 1 14 HELIX 24 AC6 PHE A 274 SER A 278 5 5 HELIX 25 AC7 VAL A 279 ALA A 285 1 7 SHEET 1 AA1 2 ARG A 158 THR A 164 0 SHEET 2 AA1 2 THR A 167 ALA A 172 -1 O THR A 167 N THR A 164 SHEET 1 AA2 3 TYR A1018 LYS A1019 0 SHEET 2 AA2 3 TYR A1025 ILE A1027 -1 O THR A1026 N TYR A1018 SHEET 3 AA2 3 HIS A1031 LEU A1032 -1 O HIS A1031 N ILE A1027 SSBOND 1 CYS A 92 CYS A 170 1555 1555 2.02 SITE 1 AC1 15 ASP A 66 VAL A 69 PHE A 76 LEU A 80 SITE 2 AC1 15 HIS A 96 CYS A 99 SER A 102 MET A 103 SITE 3 AC1 15 SER A 106 TRP A 236 LYS A 267 ILE A 270 SITE 4 AC1 15 ALA A 273 SER A 276 SER A 277 CRYST1 69.560 77.620 135.530 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014376 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012883 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007378 0.00000