HEADER VIRAL PROTEIN 14-FEB-17 5X4S TITLE STRUCTURE OF THE N-TERMINAL DOMAIN (NTD)OF SARS-COV SPIKE PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE GLYCOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 14-292; COMPND 5 SYNONYM: S GLYCOPROTEIN,E2,PEPLOMER PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN SARS CORONAVIRUS; SOURCE 3 ORGANISM_COMMON: SARS-COV; SOURCE 4 ORGANISM_TAXID: 227859; SOURCE 5 STRAIN: BJ01; SOURCE 6 GENE: S, 2; SOURCE 7 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 8 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS SARS-COV, SPIKE, N-TERMINAL DOMAIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.YUAN,Y.ZHANG,J.QI,Y.SHI,G.F.GAO REVDAT 2 29-JUL-20 5X4S 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 03-MAY-17 5X4S 0 JRNL AUTH Y.YUAN,D.CAO,Y.ZHANG,J.MA,J.QI,Q.WANG,G.LU,Y.WU,J.YAN,Y.SHI, JRNL AUTH 2 X.ZHANG,G.F.GAO JRNL TITL CRYO-EM STRUCTURES OF MERS-COV AND SARS-COV SPIKE JRNL TITL 2 GLYCOPROTEINS REVEAL THE DYNAMIC RECEPTOR BINDING DOMAINS JRNL REF NAT COMMUN V. 8 15092 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28393837 JRNL DOI 10.1038/NCOMMS15092 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 20247 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.254 REMARK 3 R VALUE (WORKING SET) : 0.252 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.140 REMARK 3 FREE R VALUE TEST SET COUNT : 1040 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.3175 - 4.2072 0.97 2925 148 0.2401 0.2395 REMARK 3 2 4.2072 - 3.3400 1.00 2779 142 0.2199 0.2460 REMARK 3 3 3.3400 - 2.9180 1.00 2747 153 0.2631 0.3092 REMARK 3 4 2.9180 - 2.6512 1.00 2705 154 0.2894 0.3483 REMARK 3 5 2.6512 - 2.4613 1.00 2704 145 0.3018 0.3783 REMARK 3 6 2.4613 - 2.3162 1.00 2707 125 0.2898 0.3530 REMARK 3 7 2.3162 - 2.2002 1.00 2640 173 0.2940 0.3418 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2260 REMARK 3 ANGLE : 0.742 3080 REMARK 3 CHIRALITY : 0.053 346 REMARK 3 PLANARITY : 0.004 393 REMARK 3 DIHEDRAL : 13.730 807 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5135 -31.6583 -1.2876 REMARK 3 T TENSOR REMARK 3 T11: 0.2832 T22: 0.4453 REMARK 3 T33: 0.3884 T12: -0.0562 REMARK 3 T13: 0.0293 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 1.0576 L22: 1.2272 REMARK 3 L33: 1.8192 L12: -0.1680 REMARK 3 L13: 0.0237 L23: 0.4371 REMARK 3 S TENSOR REMARK 3 S11: 0.0336 S12: 0.4020 S13: 0.0461 REMARK 3 S21: -0.2863 S22: 0.1707 S23: 0.0555 REMARK 3 S31: 0.0356 S32: 0.0694 S33: -0.0072 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3081 -24.8708 -0.8010 REMARK 3 T TENSOR REMARK 3 T11: 0.3308 T22: 0.3578 REMARK 3 T33: 0.3232 T12: 0.0016 REMARK 3 T13: 0.0689 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.7453 L22: 0.9564 REMARK 3 L33: 1.6108 L12: -0.7345 REMARK 3 L13: 0.4162 L23: -0.2949 REMARK 3 S TENSOR REMARK 3 S11: 0.0199 S12: 0.3785 S13: 0.1561 REMARK 3 S21: -0.2017 S22: -0.0547 S23: 0.0648 REMARK 3 S31: -0.0783 S32: 0.0835 S33: -0.0075 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4148 -10.9563 2.6851 REMARK 3 T TENSOR REMARK 3 T11: 0.5312 T22: 0.4430 REMARK 3 T33: 0.6503 T12: 0.0649 REMARK 3 T13: 0.1044 T23: 0.0287 REMARK 3 L TENSOR REMARK 3 L11: 5.1993 L22: 0.2573 REMARK 3 L33: 1.9091 L12: -0.1392 REMARK 3 L13: -0.3902 L23: 0.2467 REMARK 3 S TENSOR REMARK 3 S11: -0.0069 S12: 0.1737 S13: 0.7364 REMARK 3 S21: -0.3728 S22: 0.2745 S23: 0.1029 REMARK 3 S31: -0.2034 S32: -0.5266 S33: -0.1081 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0843 -26.7925 4.2729 REMARK 3 T TENSOR REMARK 3 T11: 0.4021 T22: 0.3232 REMARK 3 T33: 0.4112 T12: -0.0155 REMARK 3 T13: 0.0236 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 1.3432 L22: 0.8139 REMARK 3 L33: 2.0285 L12: -0.2986 REMARK 3 L13: -0.4456 L23: -0.1048 REMARK 3 S TENSOR REMARK 3 S11: 0.0618 S12: 0.0485 S13: 0.2870 REMARK 3 S21: -0.1924 S22: -0.0083 S23: -0.1718 REMARK 3 S31: -0.1094 S32: 0.1110 S33: 0.0012 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 257 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5628 -23.0875 -7.8378 REMARK 3 T TENSOR REMARK 3 T11: 0.4451 T22: 0.4394 REMARK 3 T33: 0.3131 T12: 0.0218 REMARK 3 T13: 0.0666 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 2.9350 L22: 5.8119 REMARK 3 L33: 2.4698 L12: 3.5729 REMARK 3 L13: -1.1756 L23: -1.6682 REMARK 3 S TENSOR REMARK 3 S11: 0.4514 S12: 0.1815 S13: 0.3793 REMARK 3 S21: 0.2083 S22: -0.3665 S23: 0.1413 REMARK 3 S31: -0.1761 S32: -0.0427 S33: -0.0825 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 258 THROUGH 289 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9734 -51.1418 6.5753 REMARK 3 T TENSOR REMARK 3 T11: 0.8359 T22: 0.3445 REMARK 3 T33: 0.4842 T12: -0.0270 REMARK 3 T13: 0.0068 T23: -0.0707 REMARK 3 L TENSOR REMARK 3 L11: 1.2765 L22: 1.2620 REMARK 3 L33: 2.1478 L12: -0.3434 REMARK 3 L13: -0.0111 L23: 0.4969 REMARK 3 S TENSOR REMARK 3 S11: 0.1426 S12: -0.1743 S13: -0.0991 REMARK 3 S21: -0.4362 S22: -0.0626 S23: -0.2663 REMARK 3 S31: 1.1440 S32: 0.1518 S33: -0.1138 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5X4S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1300002916. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.039 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20329 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.3 M NA/K HYDROGEN PHOSPHATE, PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.08767 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 160.17533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 120.13150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 200.21917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.04383 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.08767 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 160.17533 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 200.21917 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 120.13150 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 40.04383 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 783 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 14 REMARK 465 ASP A 15 REMARK 465 LEU A 16 REMARK 465 ASP A 17 REMARK 465 ALA A 241 REMARK 465 GLN A 242 REMARK 465 ASP A 243 REMARK 465 VAL A 290 REMARK 465 LYS A 291 REMARK 465 SER A 292 REMARK 465 HIS A 293 REMARK 465 HIS A 294 REMARK 465 HIS A 295 REMARK 465 HIS A 296 REMARK 465 HIS A 297 REMARK 465 HIS A 298 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N SER A 289 O HOH A 701 1.91 REMARK 500 O HOH A 779 O HOH A 782 1.91 REMARK 500 ND2 ASN A 73 O HOH A 702 1.95 REMARK 500 C LEU A 286 O HOH A 701 2.08 REMARK 500 O GLU A 45 O HOH A 703 2.08 REMARK 500 OD2 ASP A 57 O HOH A 704 2.10 REMARK 500 CA LEU A 286 O HOH A 701 2.12 REMARK 500 N THR A 244 O HOH A 705 2.13 REMARK 500 O HOH A 753 O HOH A 771 2.17 REMARK 500 O HOH A 716 O HOH A 738 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 36 -117.71 49.59 REMARK 500 ILE A 72 146.80 -171.68 REMARK 500 ASN A 73 -122.07 55.26 REMARK 500 PHE A 76 71.37 -151.88 REMARK 500 LYS A 84 -133.64 61.61 REMARK 500 SER A 105 -78.59 -132.47 REMARK 500 SER A 120 -7.61 83.75 REMARK 500 ASP A 208 173.38 68.39 REMARK 500 GLU A 285 31.67 -80.38 REMARK 500 LEU A 286 43.39 -80.19 REMARK 500 LYS A 287 1.51 80.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 784 DISTANCE = 6.20 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5X4R RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 BE BASED ON STRAIN, BJ01 DBREF 5X4S A 14 292 UNP P59594 SPIKE_CVHSA 14 292 SEQADV 5X4S ASP A 77 UNP P59594 GLY 77 SEE SEQUENCE DETAILS SEQADV 5X4S THR A 244 UNP P59594 ILE 244 SEE SEQUENCE DETAILS SEQADV 5X4S HIS A 293 UNP P59594 EXPRESSION TAG SEQADV 5X4S HIS A 294 UNP P59594 EXPRESSION TAG SEQADV 5X4S HIS A 295 UNP P59594 EXPRESSION TAG SEQADV 5X4S HIS A 296 UNP P59594 EXPRESSION TAG SEQADV 5X4S HIS A 297 UNP P59594 EXPRESSION TAG SEQADV 5X4S HIS A 298 UNP P59594 EXPRESSION TAG SEQRES 1 A 285 SER ASP LEU ASP ARG CYS THR THR PHE ASP ASP VAL GLN SEQRES 2 A 285 ALA PRO ASN TYR THR GLN HIS THR SER SER MET ARG GLY SEQRES 3 A 285 VAL TYR TYR PRO ASP GLU ILE PHE ARG SER ASP THR LEU SEQRES 4 A 285 TYR LEU THR GLN ASP LEU PHE LEU PRO PHE TYR SER ASN SEQRES 5 A 285 VAL THR GLY PHE HIS THR ILE ASN HIS THR PHE ASP ASN SEQRES 6 A 285 PRO VAL ILE PRO PHE LYS ASP GLY ILE TYR PHE ALA ALA SEQRES 7 A 285 THR GLU LYS SER ASN VAL VAL ARG GLY TRP VAL PHE GLY SEQRES 8 A 285 SER THR MET ASN ASN LYS SER GLN SER VAL ILE ILE ILE SEQRES 9 A 285 ASN ASN SER THR ASN VAL VAL ILE ARG ALA CYS ASN PHE SEQRES 10 A 285 GLU LEU CYS ASP ASN PRO PHE PHE ALA VAL SER LYS PRO SEQRES 11 A 285 MET GLY THR GLN THR HIS THR MET ILE PHE ASP ASN ALA SEQRES 12 A 285 PHE ASN CYS THR PHE GLU TYR ILE SER ASP ALA PHE SER SEQRES 13 A 285 LEU ASP VAL SER GLU LYS SER GLY ASN PHE LYS HIS LEU SEQRES 14 A 285 ARG GLU PHE VAL PHE LYS ASN LYS ASP GLY PHE LEU TYR SEQRES 15 A 285 VAL TYR LYS GLY TYR GLN PRO ILE ASP VAL VAL ARG ASP SEQRES 16 A 285 LEU PRO SER GLY PHE ASN THR LEU LYS PRO ILE PHE LYS SEQRES 17 A 285 LEU PRO LEU GLY ILE ASN ILE THR ASN PHE ARG ALA ILE SEQRES 18 A 285 LEU THR ALA PHE SER PRO ALA GLN ASP THR TRP GLY THR SEQRES 19 A 285 SER ALA ALA ALA TYR PHE VAL GLY TYR LEU LYS PRO THR SEQRES 20 A 285 THR PHE MET LEU LYS TYR ASP GLU ASN GLY THR ILE THR SEQRES 21 A 285 ASP ALA VAL ASP CYS SER GLN ASN PRO LEU ALA GLU LEU SEQRES 22 A 285 LYS CYS SER VAL LYS SER HIS HIS HIS HIS HIS HIS HET NAG B 1 14 HET NAG B 2 14 HET NAG A 601 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 4 HOH *84(H2 O) SHEET 1 AA1 3 THR A 31 THR A 34 0 SHEET 2 AA1 3 ASN A 65 ILE A 72 -1 O GLY A 68 N THR A 31 SHEET 3 AA1 3 THR A 75 PHE A 76 -1 O THR A 75 N ILE A 72 SHEET 1 AA2 7 THR A 31 THR A 34 0 SHEET 2 AA2 7 ASN A 65 ILE A 72 -1 O GLY A 68 N THR A 31 SHEET 3 AA2 7 ALA A 250 TYR A 256 -1 O TYR A 252 N PHE A 69 SHEET 4 AA2 7 ILE A 87 GLU A 93 -1 N THR A 92 O ALA A 251 SHEET 5 AA2 7 PHE A 179 LYS A 190 -1 O HIS A 181 N GLU A 93 SHEET 6 AA2 7 PHE A 193 VAL A 205 -1 O VAL A 205 N PHE A 179 SHEET 7 AA2 7 LYS A 217 LEU A 222 -1 O LYS A 217 N LYS A 198 SHEET 1 AA3 3 THR A 51 PHE A 59 0 SHEET 2 AA3 3 LYS A 258 TYR A 266 -1 O THR A 260 N ASP A 57 SHEET 3 AA3 3 ILE A 272 ASP A 277 -1 O ASP A 274 N LYS A 265 SHEET 1 AA4 6 ILE A 81 PRO A 82 0 SHEET 2 AA4 6 ASN A 230 SER A 239 -1 O PHE A 231 N ILE A 81 SHEET 3 AA4 6 GLY A 100 GLY A 104 -1 N GLY A 104 O ASN A 230 SHEET 4 AA4 6 SER A 113 ASN A 118 -1 O VAL A 114 N PHE A 103 SHEET 5 AA4 6 VAL A 123 SER A 141 -1 O CYS A 128 N SER A 113 SHEET 6 AA4 6 GLN A 147 ILE A 164 -1 O THR A 160 N ALA A 127 SHEET 1 AA5 4 ILE A 81 PRO A 82 0 SHEET 2 AA5 4 ASN A 230 SER A 239 -1 O PHE A 231 N ILE A 81 SHEET 3 AA5 4 VAL A 123 SER A 141 1 N PHE A 138 O ALA A 237 SHEET 4 AA5 4 GLN A 147 ILE A 164 -1 O THR A 160 N ALA A 127 SSBOND 1 CYS A 19 CYS A 133 1555 1555 2.03 SSBOND 2 CYS A 128 CYS A 159 1555 1555 2.03 SSBOND 3 CYS A 278 CYS A 288 1555 1555 2.03 LINK ND2 ASN A 109 C1 NAG A 601 1555 1555 1.45 LINK ND2 ASN A 119 C1 NAG B 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 CISPEP 1 LYS A 287 CYS A 288 0 8.63 CRYST1 73.291 73.291 240.263 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013644 0.007878 0.000000 0.00000 SCALE2 0.000000 0.015755 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004162 0.00000