HEADER TRANSPORT PROTEIN 14-FEB-17 5X52 TITLE HUMAN SERUM ALBUMIN COMPLEXED WITH OCTANOATE AND N-ACETYL-L-METHIONINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERUM ALBUMIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ALB, GIG20, GIG42, PRO0903, PRO1708, PRO2044, PRO2619, SOURCE 6 PRO2675, UNQ696/PRO1341; SOURCE 7 EXPRESSION_SYSTEM: PICHIA; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4919 KEYWDS TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.KAWAI,M.OTAGIRI REVDAT 3 22-NOV-23 5X52 1 REMARK REVDAT 2 21-JUN-17 5X52 1 JRNL REVDAT 1 17-MAY-17 5X52 0 JRNL AUTH A.KAWAI,V.T.G.CHUANG,Y.KOUNO,K.YAMASAKI,S.MIYAMOTO,M.ANRAKU, JRNL AUTH 2 M.OTAGIRI JRNL TITL CRYSTALLOGRAPHIC ANALYSIS OF THE TERNARY COMPLEX OF JRNL TITL 2 OCTANOATE AND N-ACETYL-L-METHIONINE WITH HUMAN SERUM ALBUMIN JRNL TITL 3 REVEALS THE MODE OF THEIR STABILIZING INTERACTIONS JRNL REF BIOCHIM. BIOPHYS. ACTA V.1865 979 2017 JRNL REFN ISSN 0006-3002 JRNL PMID 28473296 JRNL DOI 10.1016/J.BBAPAP.2017.04.004 REMARK 2 REMARK 2 RESOLUTION. 3.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 23347 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 1134 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.7669 - 6.0065 0.99 2841 117 0.1857 0.2553 REMARK 3 2 6.0065 - 4.7689 1.00 2778 158 0.2491 0.2261 REMARK 3 3 4.7689 - 4.1665 1.00 2795 129 0.2214 0.2541 REMARK 3 4 4.1665 - 3.7857 1.00 2807 132 0.2357 0.2513 REMARK 3 5 3.7857 - 3.5145 1.00 2770 142 0.2680 0.3514 REMARK 3 6 3.5145 - 3.3073 1.00 2756 155 0.2856 0.3352 REMARK 3 7 3.3073 - 3.1417 1.00 2784 141 0.3084 0.3353 REMARK 3 8 3.1417 - 3.0050 0.97 2682 160 0.3472 0.3813 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 8827 REMARK 3 ANGLE : 0.410 12013 REMARK 3 CHIRALITY : 0.033 1377 REMARK 3 PLANARITY : 0.003 1565 REMARK 3 DIHEDRAL : 8.973 5438 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5X52 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1300002921. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9800 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23390 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2VUF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG3350, 50 MM POTTASIUM PHOSPHATE REMARK 280 BUFFER, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 89.68650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 574 REMARK 465 LEU A 575 REMARK 465 VAL A 576 REMARK 465 ALA A 577 REMARK 465 ALA A 578 REMARK 465 SER A 579 REMARK 465 GLN A 580 REMARK 465 ALA A 581 REMARK 465 ALA A 582 REMARK 465 LEU A 583 REMARK 465 GLY A 584 REMARK 465 LEU A 585 REMARK 465 ASP B 1 REMARK 465 ALA B 2 REMARK 465 THR B 83 REMARK 465 TYR B 84 REMARK 465 GLU B 570 REMARK 465 GLU B 571 REMARK 465 GLY B 572 REMARK 465 LYS B 573 REMARK 465 LYS B 574 REMARK 465 LEU B 575 REMARK 465 VAL B 576 REMARK 465 ALA B 577 REMARK 465 ALA B 578 REMARK 465 SER B 579 REMARK 465 GLN B 580 REMARK 465 ALA B 581 REMARK 465 ALA B 582 REMARK 465 LEU B 583 REMARK 465 GLY B 584 REMARK 465 LEU B 585 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 4 CG CD CE NZ REMARK 470 LYS A 12 CG CD CE NZ REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 ASP A 56 CG OD1 OD2 REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 LYS A 64 CE NZ REMARK 470 ARG A 81 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 82 CG CD OE1 OE2 REMARK 470 LYS A 93 CG CD CE NZ REMARK 470 ARG A 114 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 128 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 LYS A 225 CG CD CE NZ REMARK 470 LYS A 233 CD CE NZ REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 GLU A 277 CG CD OE1 OE2 REMARK 470 LYS A 281 CG CD CE NZ REMARK 470 LEU A 283 CG CD1 CD2 REMARK 470 ASP A 301 CG OD1 OD2 REMARK 470 LYS A 313 CG CD CE NZ REMARK 470 ASP A 314 CG OD1 OD2 REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 GLU A 321 CG CD OE1 OE2 REMARK 470 LYS A 323 CG CD CE NZ REMARK 470 ASP A 365 CG OD1 OD2 REMARK 470 GLU A 368 CG CD OE1 OE2 REMARK 470 LYS A 372 CG CD CE NZ REMARK 470 GLU A 382 CG CD OE1 OE2 REMARK 470 LYS A 389 CG CD CE NZ REMARK 470 GLN A 390 CG CD OE1 NE2 REMARK 470 GLN A 397 CG CD OE1 NE2 REMARK 470 LYS A 402 CG CD CE NZ REMARK 470 LYS A 439 CE NZ REMARK 470 LYS A 444 CG CD CE NZ REMARK 470 LYS A 466 CG CD CE NZ REMARK 470 LYS A 475 CE NZ REMARK 470 GLU A 479 CG CD OE1 OE2 REMARK 470 LYS A 500 CG CD CE NZ REMARK 470 GLU A 501 CG CD OE1 OE2 REMARK 470 GLU A 505 CG CD OE1 OE2 REMARK 470 THR A 508 OG1 CG2 REMARK 470 HIS A 510 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 519 CG CD CE NZ REMARK 470 GLU A 520 CG CD OE1 OE2 REMARK 470 LYS A 525 CD CE NZ REMARK 470 LYS A 536 CG CD CE NZ REMARK 470 LYS A 538 CG CD CE NZ REMARK 470 LYS A 541 CG CD CE NZ REMARK 470 GLN A 543 CD OE1 NE2 REMARK 470 ASP A 549 CG OD1 OD2 REMARK 470 GLU A 556 CG CD OE1 OE2 REMARK 470 LYS A 560 CG CD CE NZ REMARK 470 ASP A 562 CG OD1 OD2 REMARK 470 LYS A 564 CG CD CE NZ REMARK 470 GLU A 570 CG CD OE1 OE2 REMARK 470 LYS A 573 CD CE NZ REMARK 470 HIS B 3 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 4 CG CD CE NZ REMARK 470 GLU B 6 CG CD OE1 OE2 REMARK 470 LYS B 12 CG CD CE NZ REMARK 470 LYS B 20 CG CD CE NZ REMARK 470 GLU B 37 CG CD OE1 OE2 REMARK 470 GLU B 48 CG CD OE1 OE2 REMARK 470 LYS B 51 CG CD CE NZ REMARK 470 GLU B 60 CG CD OE1 OE2 REMARK 470 ASP B 63 CG OD1 OD2 REMARK 470 ASP B 72 CG OD1 OD2 REMARK 470 LEU B 74 CG CD1 CD2 REMARK 470 ARG B 81 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 82 CG CD OE1 OE2 REMARK 470 LYS B 93 CG CD CE NZ REMARK 470 GLN B 94 CG CD OE1 NE2 REMARK 470 GLU B 95 CG CD OE1 OE2 REMARK 470 GLU B 97 CG CD OE1 OE2 REMARK 470 GLU B 100 CG CD OE1 OE2 REMARK 470 ARG B 114 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 132 CG CD OE1 OE2 REMARK 470 LYS B 159 CG CD CE NZ REMARK 470 ARG B 209 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 225 CG CD CE NZ REMARK 470 GLU B 227 CG CD OE1 OE2 REMARK 470 LYS B 233 CD CE NZ REMARK 470 LYS B 262 CG CD CE NZ REMARK 470 ASP B 269 CG OD1 OD2 REMARK 470 LYS B 274 CG CD CE NZ REMARK 470 LYS B 276 CG CD CE NZ REMARK 470 GLU B 277 CG CD OE1 OE2 REMARK 470 GLU B 280 CG CD OE1 OE2 REMARK 470 LEU B 283 CG CD1 CD2 REMARK 470 LYS B 286 CD CE NZ REMARK 470 GLU B 294 CG CD OE1 OE2 REMARK 470 ASP B 301 CG OD1 OD2 REMARK 470 LEU B 302 CG CD1 CD2 REMARK 470 LEU B 305 CG CD1 CD2 REMARK 470 LYS B 313 CG CD CE NZ REMARK 470 ASP B 314 CG OD1 OD2 REMARK 470 LYS B 317 CG CD CE NZ REMARK 470 GLU B 321 CG CD OE1 OE2 REMARK 470 LYS B 323 CG CD CE NZ REMARK 470 ARG B 336 CD NE CZ NH1 NH2 REMARK 470 ARG B 337 NE CZ NH1 NH2 REMARK 470 LYS B 359 CG CD CE NZ REMARK 470 GLU B 368 CG CD OE1 OE2 REMARK 470 LYS B 372 CG CD CE NZ REMARK 470 LYS B 378 CG CD CE NZ REMARK 470 ASN B 386 CG OD1 ND2 REMARK 470 LYS B 389 CG CD CE NZ REMARK 470 GLU B 393 CG CD OE1 OE2 REMARK 470 GLU B 396 CG CD OE1 OE2 REMARK 470 LYS B 402 CG CD CE NZ REMARK 470 LYS B 439 CG CD CE NZ REMARK 470 GLU B 442 CG CD OE1 OE2 REMARK 470 LYS B 444 CG CD CE NZ REMARK 470 LYS B 466 CG CD CE NZ REMARK 470 ASP B 471 CG OD1 OD2 REMARK 470 GLU B 479 CG CD OE1 OE2 REMARK 470 GLU B 501 CG CD OE1 OE2 REMARK 470 GLU B 505 CG CD OE1 OE2 REMARK 470 GLU B 520 CD OE1 OE2 REMARK 470 LYS B 536 CG CD CE NZ REMARK 470 LYS B 538 CG CD CE NZ REMARK 470 LYS B 541 CD CE NZ REMARK 470 GLU B 542 CG CD OE1 OE2 REMARK 470 GLN B 543 CG CD OE1 NE2 REMARK 470 LYS B 545 CG CD CE NZ REMARK 470 VAL B 547 CG1 CG2 REMARK 470 MET B 548 CG SD CE REMARK 470 ASP B 549 CG OD1 OD2 REMARK 470 GLU B 556 CG CD OE1 OE2 REMARK 470 LYS B 557 CG CD CE NZ REMARK 470 LYS B 564 CG CD CE NZ REMARK 470 PHE B 568 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 110 30.46 -91.36 REMARK 500 ASP A 129 -70.88 -62.15 REMARK 500 TYR A 150 99.85 -61.44 REMARK 500 ILE A 271 -70.69 -122.16 REMARK 500 PRO A 282 170.93 -59.28 REMARK 500 VAL A 310 -60.57 -106.46 REMARK 500 LYS A 372 47.93 -107.37 REMARK 500 CYS A 437 21.78 -143.39 REMARK 500 GLU A 479 -75.73 -64.00 REMARK 500 SER A 480 17.09 -152.28 REMARK 500 LEU A 481 -58.55 61.40 REMARK 500 GLU B 6 -60.75 60.69 REMARK 500 ALA B 59 -168.35 -78.19 REMARK 500 ASN B 61 4.62 59.16 REMARK 500 ARG B 81 72.26 -119.91 REMARK 500 GLU B 97 -14.67 79.13 REMARK 500 PHE B 223 74.55 -117.40 REMARK 500 ILE B 271 -66.04 -134.90 REMARK 500 VAL B 310 -61.22 -122.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AME A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OCA A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OCA A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AME B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OCA B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 603 DBREF 5X52 A 1 585 UNP P02768 ALBU_HUMAN 25 609 DBREF 5X52 B 1 585 UNP P02768 ALBU_HUMAN 25 609 SEQRES 1 A 585 ASP ALA HIS LYS SER GLU VAL ALA HIS ARG PHE LYS ASP SEQRES 2 A 585 LEU GLY GLU GLU ASN PHE LYS ALA LEU VAL LEU ILE ALA SEQRES 3 A 585 PHE ALA GLN TYR LEU GLN GLN CYS PRO PHE GLU ASP HIS SEQRES 4 A 585 VAL LYS LEU VAL ASN GLU VAL THR GLU PHE ALA LYS THR SEQRES 5 A 585 CYS VAL ALA ASP GLU SER ALA GLU ASN CYS ASP LYS SER SEQRES 6 A 585 LEU HIS THR LEU PHE GLY ASP LYS LEU CYS THR VAL ALA SEQRES 7 A 585 THR LEU ARG GLU THR TYR GLY GLU MET ALA ASP CYS CYS SEQRES 8 A 585 ALA LYS GLN GLU PRO GLU ARG ASN GLU CYS PHE LEU GLN SEQRES 9 A 585 HIS LYS ASP ASP ASN PRO ASN LEU PRO ARG LEU VAL ARG SEQRES 10 A 585 PRO GLU VAL ASP VAL MET CYS THR ALA PHE HIS ASP ASN SEQRES 11 A 585 GLU GLU THR PHE LEU LYS LYS TYR LEU TYR GLU ILE ALA SEQRES 12 A 585 ARG ARG HIS PRO TYR PHE TYR ALA PRO GLU LEU LEU PHE SEQRES 13 A 585 PHE ALA LYS ARG TYR LYS ALA ALA PHE THR GLU CYS CYS SEQRES 14 A 585 GLN ALA ALA ASP LYS ALA ALA CYS LEU LEU PRO LYS LEU SEQRES 15 A 585 ASP GLU LEU ARG ASP GLU GLY LYS ALA SER SER ALA LYS SEQRES 16 A 585 GLN ARG LEU LYS CYS ALA SER LEU GLN LYS PHE GLY GLU SEQRES 17 A 585 ARG ALA PHE LYS ALA TRP ALA VAL ALA ARG LEU SER GLN SEQRES 18 A 585 ARG PHE PRO LYS ALA GLU PHE ALA GLU VAL SER LYS LEU SEQRES 19 A 585 VAL THR ASP LEU THR LYS VAL HIS THR GLU CYS CYS HIS SEQRES 20 A 585 GLY ASP LEU LEU GLU CYS ALA ASP ASP ARG ALA ASP LEU SEQRES 21 A 585 ALA LYS TYR ILE CYS GLU ASN GLN ASP SER ILE SER SER SEQRES 22 A 585 LYS LEU LYS GLU CYS CYS GLU LYS PRO LEU LEU GLU LYS SEQRES 23 A 585 SER HIS CYS ILE ALA GLU VAL GLU ASN ASP GLU MET PRO SEQRES 24 A 585 ALA ASP LEU PRO SER LEU ALA ALA ASP PHE VAL GLU SER SEQRES 25 A 585 LYS ASP VAL CYS LYS ASN TYR ALA GLU ALA LYS ASP VAL SEQRES 26 A 585 PHE LEU GLY MET PHE LEU TYR GLU TYR ALA ARG ARG HIS SEQRES 27 A 585 PRO ASP TYR SER VAL VAL LEU LEU LEU ARG LEU ALA LYS SEQRES 28 A 585 THR TYR GLU THR THR LEU GLU LYS CYS CYS ALA ALA ALA SEQRES 29 A 585 ASP PRO HIS GLU CYS TYR ALA LYS VAL PHE ASP GLU PHE SEQRES 30 A 585 LYS PRO LEU VAL GLU GLU PRO GLN ASN LEU ILE LYS GLN SEQRES 31 A 585 ASN CYS GLU LEU PHE GLU GLN LEU GLY GLU TYR LYS PHE SEQRES 32 A 585 GLN ASN ALA LEU LEU VAL ARG TYR THR LYS LYS VAL PRO SEQRES 33 A 585 GLN VAL SER THR PRO THR LEU VAL GLU VAL SER ARG ASN SEQRES 34 A 585 LEU GLY LYS VAL GLY SER LYS CYS CYS LYS HIS PRO GLU SEQRES 35 A 585 ALA LYS ARG MET PRO CYS ALA GLU ASP TYR LEU SER VAL SEQRES 36 A 585 VAL LEU ASN GLN LEU CYS VAL LEU HIS GLU LYS THR PRO SEQRES 37 A 585 VAL SER ASP ARG VAL THR LYS CYS CYS THR GLU SER LEU SEQRES 38 A 585 VAL ASN ARG ARG PRO CYS PHE SER ALA LEU GLU VAL ASP SEQRES 39 A 585 GLU THR TYR VAL PRO LYS GLU PHE ASN ALA GLU THR PHE SEQRES 40 A 585 THR PHE HIS ALA ASP ILE CYS THR LEU SER GLU LYS GLU SEQRES 41 A 585 ARG GLN ILE LYS LYS GLN THR ALA LEU VAL GLU LEU VAL SEQRES 42 A 585 LYS HIS LYS PRO LYS ALA THR LYS GLU GLN LEU LYS ALA SEQRES 43 A 585 VAL MET ASP ASP PHE ALA ALA PHE VAL GLU LYS CYS CYS SEQRES 44 A 585 LYS ALA ASP ASP LYS GLU THR CYS PHE ALA GLU GLU GLY SEQRES 45 A 585 LYS LYS LEU VAL ALA ALA SER GLN ALA ALA LEU GLY LEU SEQRES 1 B 585 ASP ALA HIS LYS SER GLU VAL ALA HIS ARG PHE LYS ASP SEQRES 2 B 585 LEU GLY GLU GLU ASN PHE LYS ALA LEU VAL LEU ILE ALA SEQRES 3 B 585 PHE ALA GLN TYR LEU GLN GLN CYS PRO PHE GLU ASP HIS SEQRES 4 B 585 VAL LYS LEU VAL ASN GLU VAL THR GLU PHE ALA LYS THR SEQRES 5 B 585 CYS VAL ALA ASP GLU SER ALA GLU ASN CYS ASP LYS SER SEQRES 6 B 585 LEU HIS THR LEU PHE GLY ASP LYS LEU CYS THR VAL ALA SEQRES 7 B 585 THR LEU ARG GLU THR TYR GLY GLU MET ALA ASP CYS CYS SEQRES 8 B 585 ALA LYS GLN GLU PRO GLU ARG ASN GLU CYS PHE LEU GLN SEQRES 9 B 585 HIS LYS ASP ASP ASN PRO ASN LEU PRO ARG LEU VAL ARG SEQRES 10 B 585 PRO GLU VAL ASP VAL MET CYS THR ALA PHE HIS ASP ASN SEQRES 11 B 585 GLU GLU THR PHE LEU LYS LYS TYR LEU TYR GLU ILE ALA SEQRES 12 B 585 ARG ARG HIS PRO TYR PHE TYR ALA PRO GLU LEU LEU PHE SEQRES 13 B 585 PHE ALA LYS ARG TYR LYS ALA ALA PHE THR GLU CYS CYS SEQRES 14 B 585 GLN ALA ALA ASP LYS ALA ALA CYS LEU LEU PRO LYS LEU SEQRES 15 B 585 ASP GLU LEU ARG ASP GLU GLY LYS ALA SER SER ALA LYS SEQRES 16 B 585 GLN ARG LEU LYS CYS ALA SER LEU GLN LYS PHE GLY GLU SEQRES 17 B 585 ARG ALA PHE LYS ALA TRP ALA VAL ALA ARG LEU SER GLN SEQRES 18 B 585 ARG PHE PRO LYS ALA GLU PHE ALA GLU VAL SER LYS LEU SEQRES 19 B 585 VAL THR ASP LEU THR LYS VAL HIS THR GLU CYS CYS HIS SEQRES 20 B 585 GLY ASP LEU LEU GLU CYS ALA ASP ASP ARG ALA ASP LEU SEQRES 21 B 585 ALA LYS TYR ILE CYS GLU ASN GLN ASP SER ILE SER SER SEQRES 22 B 585 LYS LEU LYS GLU CYS CYS GLU LYS PRO LEU LEU GLU LYS SEQRES 23 B 585 SER HIS CYS ILE ALA GLU VAL GLU ASN ASP GLU MET PRO SEQRES 24 B 585 ALA ASP LEU PRO SER LEU ALA ALA ASP PHE VAL GLU SER SEQRES 25 B 585 LYS ASP VAL CYS LYS ASN TYR ALA GLU ALA LYS ASP VAL SEQRES 26 B 585 PHE LEU GLY MET PHE LEU TYR GLU TYR ALA ARG ARG HIS SEQRES 27 B 585 PRO ASP TYR SER VAL VAL LEU LEU LEU ARG LEU ALA LYS SEQRES 28 B 585 THR TYR GLU THR THR LEU GLU LYS CYS CYS ALA ALA ALA SEQRES 29 B 585 ASP PRO HIS GLU CYS TYR ALA LYS VAL PHE ASP GLU PHE SEQRES 30 B 585 LYS PRO LEU VAL GLU GLU PRO GLN ASN LEU ILE LYS GLN SEQRES 31 B 585 ASN CYS GLU LEU PHE GLU GLN LEU GLY GLU TYR LYS PHE SEQRES 32 B 585 GLN ASN ALA LEU LEU VAL ARG TYR THR LYS LYS VAL PRO SEQRES 33 B 585 GLN VAL SER THR PRO THR LEU VAL GLU VAL SER ARG ASN SEQRES 34 B 585 LEU GLY LYS VAL GLY SER LYS CYS CYS LYS HIS PRO GLU SEQRES 35 B 585 ALA LYS ARG MET PRO CYS ALA GLU ASP TYR LEU SER VAL SEQRES 36 B 585 VAL LEU ASN GLN LEU CYS VAL LEU HIS GLU LYS THR PRO SEQRES 37 B 585 VAL SER ASP ARG VAL THR LYS CYS CYS THR GLU SER LEU SEQRES 38 B 585 VAL ASN ARG ARG PRO CYS PHE SER ALA LEU GLU VAL ASP SEQRES 39 B 585 GLU THR TYR VAL PRO LYS GLU PHE ASN ALA GLU THR PHE SEQRES 40 B 585 THR PHE HIS ALA ASP ILE CYS THR LEU SER GLU LYS GLU SEQRES 41 B 585 ARG GLN ILE LYS LYS GLN THR ALA LEU VAL GLU LEU VAL SEQRES 42 B 585 LYS HIS LYS PRO LYS ALA THR LYS GLU GLN LEU LYS ALA SEQRES 43 B 585 VAL MET ASP ASP PHE ALA ALA PHE VAL GLU LYS CYS CYS SEQRES 44 B 585 LYS ALA ASP ASP LYS GLU THR CYS PHE ALA GLU GLU GLY SEQRES 45 B 585 LYS LYS LEU VAL ALA ALA SER GLN ALA ALA LEU GLY LEU HET AME A 601 12 HET OCA A 602 10 HET OCA A 603 10 HET PO4 A 604 5 HET AME B 601 12 HET OCA B 602 10 HET PO4 B 603 5 HETNAM AME N-ACETYLMETHIONINE HETNAM OCA OCTANOIC ACID (CAPRYLIC ACID) HETNAM PO4 PHOSPHATE ION FORMUL 3 AME 2(C7 H13 N O3 S) FORMUL 4 OCA 3(C8 H16 O2) FORMUL 6 PO4 2(O4 P 3-) HELIX 1 AA1 SER A 5 LEU A 31 1 27 HELIX 2 AA2 PRO A 35 ASP A 56 1 22 HELIX 3 AA3 SER A 65 CYS A 75 1 11 HELIX 4 AA4 THR A 79 GLY A 85 1 7 HELIX 5 AA5 GLU A 86 CYS A 91 5 6 HELIX 6 AA6 PRO A 96 HIS A 105 1 10 HELIX 7 AA7 GLU A 119 ASN A 130 1 12 HELIX 8 AA8 ASN A 130 HIS A 146 1 17 HELIX 9 AA9 TYR A 150 CYS A 169 1 20 HELIX 10 AB1 ASP A 173 PHE A 223 1 51 HELIX 11 AB2 GLU A 227 GLY A 248 1 22 HELIX 12 AB3 ASP A 249 ASN A 267 1 19 HELIX 13 AB4 PRO A 282 ALA A 291 1 10 HELIX 14 AB5 LEU A 305 VAL A 310 1 6 HELIX 15 AB6 ASP A 314 ALA A 322 1 9 HELIX 16 AB7 ALA A 322 HIS A 338 1 17 HELIX 17 AB8 SER A 342 CYS A 361 1 20 HELIX 18 AB9 ASP A 365 TYR A 370 1 6 HELIX 19 AC1 ALA A 371 GLU A 376 5 6 HELIX 20 AC2 PHE A 377 GLN A 397 1 21 HELIX 21 AC3 GLY A 399 VAL A 415 1 17 HELIX 22 AC4 SER A 419 CYS A 438 1 20 HELIX 23 AC5 PRO A 441 THR A 467 1 27 HELIX 24 AC6 SER A 470 GLU A 479 1 10 HELIX 25 AC7 ASN A 483 ALA A 490 1 8 HELIX 26 AC8 ALA A 511 LEU A 516 1 6 HELIX 27 AC9 SER A 517 LYS A 536 1 20 HELIX 28 AD1 THR A 540 ALA A 561 1 22 HELIX 29 AD2 GLU A 565 GLU A 571 1 7 HELIX 30 AD3 GLU B 6 GLY B 15 1 10 HELIX 31 AD4 GLY B 15 LEU B 31 1 17 HELIX 32 AD5 PRO B 35 ASP B 56 1 22 HELIX 33 AD6 SER B 65 LEU B 74 1 10 HELIX 34 AD7 GLY B 85 CYS B 91 5 7 HELIX 35 AD8 GLU B 97 HIS B 105 1 9 HELIX 36 AD9 GLU B 119 ASN B 130 1 12 HELIX 37 AE1 ASN B 130 HIS B 146 1 17 HELIX 38 AE2 TYR B 150 CYS B 169 1 20 HELIX 39 AE3 ASP B 173 PHE B 223 1 51 HELIX 40 AE4 GLU B 227 HIS B 247 1 21 HELIX 41 AE5 ASP B 249 ASN B 267 1 19 HELIX 42 AE6 GLN B 268 ILE B 271 5 4 HELIX 43 AE7 LEU B 275 GLU B 280 1 6 HELIX 44 AE8 PRO B 282 GLU B 292 1 11 HELIX 45 AE9 LEU B 305 VAL B 310 1 6 HELIX 46 AF1 ASP B 314 ALA B 322 1 9 HELIX 47 AF2 ALA B 322 HIS B 338 1 17 HELIX 48 AF3 SER B 342 CYS B 361 1 20 HELIX 49 AF4 ASP B 365 TYR B 370 1 6 HELIX 50 AF5 ALA B 371 GLU B 376 5 6 HELIX 51 AF6 PHE B 377 VAL B 415 1 39 HELIX 52 AF7 SER B 419 CYS B 438 1 20 HELIX 53 AF8 LYS B 444 THR B 467 1 24 HELIX 54 AF9 SER B 470 SER B 480 1 11 HELIX 55 AG1 ASN B 483 ALA B 490 1 8 HELIX 56 AG2 HIS B 510 LEU B 516 5 7 HELIX 57 AG3 SER B 517 LYS B 536 1 20 HELIX 58 AG4 THR B 540 ALA B 561 1 22 HELIX 59 AG5 GLU B 565 ALA B 569 5 5 SSBOND 1 CYS A 53 CYS A 62 1555 1555 2.03 SSBOND 2 CYS A 75 CYS A 91 1555 1555 2.03 SSBOND 3 CYS A 90 CYS A 101 1555 1555 2.02 SSBOND 4 CYS A 124 CYS A 169 1555 1555 2.03 SSBOND 5 CYS A 168 CYS A 177 1555 1555 2.04 SSBOND 6 CYS A 200 CYS A 246 1555 1555 2.03 SSBOND 7 CYS A 245 CYS A 253 1555 1555 2.03 SSBOND 8 CYS A 265 CYS A 279 1555 1555 2.03 SSBOND 9 CYS A 278 CYS A 289 1555 1555 2.02 SSBOND 10 CYS A 316 CYS A 361 1555 1555 2.03 SSBOND 11 CYS A 360 CYS A 369 1555 1555 2.03 SSBOND 12 CYS A 392 CYS A 438 1555 1555 2.03 SSBOND 13 CYS A 437 CYS A 448 1555 1555 2.03 SSBOND 14 CYS A 476 CYS A 487 1555 1555 2.03 SSBOND 15 CYS A 514 CYS A 559 1555 1555 2.03 SSBOND 16 CYS A 558 CYS A 567 1555 1555 2.03 SSBOND 17 CYS B 53 CYS B 62 1555 1555 2.03 SSBOND 18 CYS B 75 CYS B 91 1555 1555 2.03 SSBOND 19 CYS B 90 CYS B 101 1555 1555 2.03 SSBOND 20 CYS B 124 CYS B 169 1555 1555 2.03 SSBOND 21 CYS B 168 CYS B 177 1555 1555 2.03 SSBOND 22 CYS B 200 CYS B 246 1555 1555 2.03 SSBOND 23 CYS B 245 CYS B 253 1555 1555 2.03 SSBOND 24 CYS B 265 CYS B 279 1555 1555 2.03 SSBOND 25 CYS B 278 CYS B 289 1555 1555 2.03 SSBOND 26 CYS B 316 CYS B 361 1555 1555 2.03 SSBOND 27 CYS B 360 CYS B 369 1555 1555 2.03 SSBOND 28 CYS B 392 CYS B 438 1555 1555 2.03 SSBOND 29 CYS B 437 CYS B 448 1555 1555 2.04 SSBOND 30 CYS B 461 CYS B 477 1555 1555 2.03 SSBOND 31 CYS B 476 CYS B 487 1555 1555 2.03 SSBOND 32 CYS B 514 CYS B 559 1555 1555 2.03 SSBOND 33 CYS B 558 CYS B 567 1555 1555 2.03 LINK NZ LYS A 190 O3 PO4 A 604 1555 1555 1.30 CISPEP 1 GLU A 95 PRO A 96 0 1.01 CISPEP 2 GLU B 95 PRO B 96 0 1.46 CISPEP 3 ASP B 562 ASP B 563 0 6.07 SITE 1 AC1 4 LYS A 195 ARG A 218 ARG A 222 OCA A 603 SITE 1 AC2 6 ASN A 391 LEU A 407 ARG A 410 TYR A 411 SITE 2 AC2 6 LYS A 414 SER A 489 SITE 1 AC3 7 LYS A 199 TRP A 214 ARG A 218 ARG A 222 SITE 2 AC3 7 LEU A 238 ILE A 290 AME A 601 SITE 1 AC4 4 ARG A 186 LYS A 190 ARG A 428 LYS A 432 SITE 1 AC5 3 LYS B 195 ARG B 218 ARG B 222 SITE 1 AC6 5 LEU B 219 ARG B 222 ARG B 257 ILE B 290 SITE 2 AC6 5 ALA B 291 SITE 1 AC7 5 ARG B 186 LYS B 190 ARG B 428 LYS B 432 SITE 2 AC7 5 LYS B 519 CRYST1 58.538 179.373 59.323 90.00 105.43 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017083 0.000000 0.004716 0.00000 SCALE2 0.000000 0.005575 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017487 0.00000