HEADER TRANSFERASE 20-FEB-17 5X62 TITLE CRYSTAL STRUCTURE OF A CARNOSINE N-METHYLTRANSFERASE BOUND BY ADOHCY COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARNOSINE N-METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.1.1.22; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: YNL092W, N2227; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METHYLTRANSFERASE, SAM, ROSSMANN FOLD, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR W.XIE,X.LIU REVDAT 3 30-AUG-17 5X62 1 JRNL REVDAT 2 02-AUG-17 5X62 1 JRNL REVDAT 1 26-JUL-17 5X62 0 JRNL AUTH X.LIU,J.WU,Y.SUN,W.XIE JRNL TITL SUBSTRATE RECOGNITION MECHANISM OF THE PUTATIVE YEAST JRNL TITL 2 CARNOSINE N-METHYLTRANSFERASE JRNL REF ACS CHEM. BIOL. V. 12 2164 2017 JRNL REFN ESSN 1554-8937 JRNL PMID 28654751 JRNL DOI 10.1021/ACSCHEMBIO.7B00328 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 46985 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2377 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.4488 - 5.6625 1.00 2803 163 0.2102 0.2240 REMARK 3 2 5.6625 - 4.4967 1.00 2711 127 0.2001 0.2320 REMARK 3 3 4.4967 - 3.9289 1.00 2687 127 0.1802 0.2074 REMARK 3 4 3.9289 - 3.5700 1.00 2660 128 0.1872 0.2312 REMARK 3 5 3.5700 - 3.3143 1.00 2644 125 0.1937 0.2639 REMARK 3 6 3.3143 - 3.1189 1.00 2626 143 0.1977 0.2461 REMARK 3 7 3.1189 - 2.9628 1.00 2629 148 0.2027 0.2456 REMARK 3 8 2.9628 - 2.8339 1.00 2589 137 0.1988 0.2574 REMARK 3 9 2.8339 - 2.7248 1.00 2603 164 0.2047 0.2366 REMARK 3 10 2.7248 - 2.6308 1.00 2584 144 0.2241 0.2778 REMARK 3 11 2.6308 - 2.5486 1.00 2598 150 0.2199 0.2837 REMARK 3 12 2.5486 - 2.4757 1.00 2606 134 0.2204 0.2607 REMARK 3 13 2.4757 - 2.4106 1.00 2606 134 0.2285 0.2691 REMARK 3 14 2.4106 - 2.3518 1.00 2578 130 0.2408 0.2955 REMARK 3 15 2.3518 - 2.2983 1.00 2596 144 0.2493 0.2983 REMARK 3 16 2.2983 - 2.2494 1.00 2599 133 0.2518 0.2730 REMARK 3 17 2.2494 - 2.2044 0.97 2489 146 0.2636 0.2805 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6066 REMARK 3 ANGLE : 0.910 8245 REMARK 3 CHIRALITY : 0.054 911 REMARK 3 PLANARITY : 0.005 1058 REMARK 3 DIHEDRAL : 13.052 3599 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5X62 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1300002278. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47093 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 1.05200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.940 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30-35% PEG 400, 0.1 M NAOAC, 0.1 M REMARK 280 NACL, PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.76850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.61750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.45100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 87.61750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.76850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.45100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 PRO A -4 REMARK 465 HIS A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 GLU A 3 REMARK 465 ASN A 4 REMARK 465 GLU A 5 REMARK 465 PHE A 6 REMARK 465 ASP A 7 REMARK 465 SER A 220 REMARK 465 SER A 221 REMARK 465 ASN A 222 REMARK 465 LYS A 223 REMARK 465 GLY A 224 REMARK 465 TYR A 325 REMARK 465 SER A 326 REMARK 465 GLY A 327 REMARK 465 PHE A 328 REMARK 465 GLN A 329 REMARK 465 ASP A 330 REMARK 465 LYS A 331 REMARK 465 PRO A 396 REMARK 465 THR A 397 REMARK 465 ASN A 398 REMARK 465 GLU A 399 REMARK 465 SER A 400 REMARK 465 GLY B -5 REMARK 465 PRO B -4 REMARK 465 HIS B -3 REMARK 465 MET B -2 REMARK 465 ALA B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 GLU B 3 REMARK 465 ASN B 4 REMARK 465 GLU B 5 REMARK 465 PHE B 6 REMARK 465 ASP B 7 REMARK 465 ASN B 8 REMARK 465 PRO B 396 REMARK 465 THR B 397 REMARK 465 ASN B 398 REMARK 465 GLU B 399 REMARK 465 SER B 400 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 8 CG OD1 ND2 REMARK 470 GLN A 9 CG CD OE1 NE2 REMARK 470 ARG A 10 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 11 CG CD OE1 OE2 REMARK 470 LYS A 13 CG CD CE NZ REMARK 470 LYS A 39 CG CD CE NZ REMARK 470 LYS A 57 CG CD CE NZ REMARK 470 ILE A 84 CG1 CG2 CD1 REMARK 470 SER A 85 OG REMARK 470 PHE A 86 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 87 CG CD OE1 OE2 REMARK 470 PRO A 88 CG CD REMARK 470 ILE A 91 CG1 CG2 CD1 REMARK 470 LYS A 133 CG CD CE NZ REMARK 470 LEU A 135 CG CD1 CD2 REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 ARG A 158 CG CD NE CZ NH1 NH2 REMARK 470 TRP A 219 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 219 CZ3 CH2 REMARK 470 GLN A 243 CG CD OE1 NE2 REMARK 470 LYS A 246 CG CD CE NZ REMARK 470 ILE A 247 CG1 CG2 CD1 REMARK 470 SER A 249 OG REMARK 470 PHE A 253 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 255 CG CD NE CZ NH1 NH2 REMARK 470 MET A 257 CG SD CE REMARK 470 LEU A 259 CG CD1 CD2 REMARK 470 LYS A 263 CG CD CE NZ REMARK 470 TYR A 320 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 322 CG1 CG2 REMARK 470 ASN A 323 CG OD1 ND2 REMARK 470 ILE A 332 CG1 CG2 CD1 REMARK 470 ASP A 334 CG OD1 OD2 REMARK 470 ASP A 357 CG OD1 OD2 REMARK 470 GLU A 359 CG CD OE1 OE2 REMARK 470 ARG B 10 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 13 CG CD CE NZ REMARK 470 LYS B 57 CG CD CE NZ REMARK 470 SER B 85 OG REMARK 470 PRO B 88 CG CD REMARK 470 ILE B 91 CG1 CG2 CD1 REMARK 470 VAL B 92 CG1 CG2 REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 LYS B 203 CG CD CE NZ REMARK 470 GLU B 205 CG CD OE1 OE2 REMARK 470 LYS B 223 CG CD CE NZ REMARK 470 LYS B 246 CG CD CE NZ REMARK 470 ARG B 255 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 259 CG CD1 CD2 REMARK 470 LYS B 263 CG CD CE NZ REMARK 470 TYR B 325 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER B 326 OG REMARK 470 PHE B 328 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 331 CG CD CE NZ REMARK 470 ASP B 334 CG OD1 OD2 REMARK 470 TYR B 335 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 359 CG CD OE1 OE2 REMARK 470 GLU B 378 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 612 O HOH A 667 2.11 REMARK 500 O HOH A 650 O HOH A 663 2.16 REMARK 500 O HOH B 709 O HOH B 714 2.17 REMARK 500 O HOH B 654 O HOH B 702 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 306 68.53 -113.60 REMARK 500 SER B 248 -158.72 -152.42 REMARK 500 LEU B 306 68.77 -114.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 693 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 694 DISTANCE = 6.00 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 266 OD1 REMARK 620 2 GLY B 291 O 177.5 REMARK 620 3 HIS B 292 O 98.1 84.4 REMARK 620 4 LEU B 294 O 82.5 96.9 99.9 REMARK 620 5 HOH B 700 O 90.8 86.8 166.9 90.8 REMARK 620 6 HOH B 704 O 92.0 87.8 97.5 162.3 72.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 502 DBREF 5X62 A 1 400 UNP P53934 CARME_YEAST 1 400 DBREF 5X62 B 1 400 UNP P53934 CARME_YEAST 1 400 SEQADV 5X62 GLY A -5 UNP P53934 EXPRESSION TAG SEQADV 5X62 PRO A -4 UNP P53934 EXPRESSION TAG SEQADV 5X62 HIS A -3 UNP P53934 EXPRESSION TAG SEQADV 5X62 MET A -2 UNP P53934 EXPRESSION TAG SEQADV 5X62 ALA A -1 UNP P53934 EXPRESSION TAG SEQADV 5X62 SER A 0 UNP P53934 EXPRESSION TAG SEQADV 5X62 GLY B -5 UNP P53934 EXPRESSION TAG SEQADV 5X62 PRO B -4 UNP P53934 EXPRESSION TAG SEQADV 5X62 HIS B -3 UNP P53934 EXPRESSION TAG SEQADV 5X62 MET B -2 UNP P53934 EXPRESSION TAG SEQADV 5X62 ALA B -1 UNP P53934 EXPRESSION TAG SEQADV 5X62 SER B 0 UNP P53934 EXPRESSION TAG SEQRES 1 A 406 GLY PRO HIS MET ALA SER MET ASP GLU ASN GLU PHE ASP SEQRES 2 A 406 ASN GLN ARG GLU ASN LYS ALA VAL ALA ARG VAL ILE ILE SEQRES 3 A 406 SER PHE LEU LYS TYR GLU GLU TYR ALA LEU LYS GLU ILE SEQRES 4 A 406 TYR ASN LEU ARG VAL LYS LYS TRP ALA SER ILE SER ASP SEQRES 5 A 406 ARG GLN LYS ASP MET VAL PRO ASN TYR THR LYS TYR LEU SEQRES 6 A 406 ALA ASN LEU LYS ALA ALA ILE ILE GLU ASN GLY LYS PHE SEQRES 7 A 406 PHE ARG SER VAL ALA GLU TYR ALA LEU GLN SER ILE SER SEQRES 8 A 406 PHE GLU PRO GLY GLU ILE VAL GLN PRO ASN ASP LEU ASP SEQRES 9 A 406 MET SER LYS THR CYS SER LEU LEU THR GLN VAL TYR ARG SEQRES 10 A 406 GLU TRP SER ALA GLU ALA ILE SER GLU ARG ASN CYS LEU SEQRES 11 A 406 ASN SER ARG LEU VAL PRO PHE LEU LYS THR LEU SER PRO SEQRES 12 A 406 PRO LYS ALA ASP ILE LEU ILE PRO GLY CYS GLY THR GLY SEQRES 13 A 406 ARG LEU LEU VAL ASP LEU SER ARG MET GLY TYR ASN CYS SEQRES 14 A 406 GLU GLY ASN GLU PHE SER TYR HIS MET LEU LEU VAL SER SEQRES 15 A 406 GLN TYR MET LEU ASN ALA GLY LEU LEU GLN ASN GLN ILE SEQRES 16 A 406 ILE ILE TYR PRO PHE ILE HIS CYS PHE SER HIS TRP LYS SEQRES 17 A 406 LYS ILE GLU ASP GLN LEU SER PRO ILE LYS VAL PRO ASP SEQRES 18 A 406 ILE GLU ALA TRP SER SER ASN LYS GLY MET GLY SER MET SEQRES 19 A 406 SER ILE CYS ALA GLY SER PHE VAL ASP CYS TYR GLY ARG SEQRES 20 A 406 ASN GLN GLY THR LYS ILE SER SER HIS TYR THR PHE SER SEQRES 21 A 406 ARG ARG MET GLN LEU SER ARG ALA LYS ALA GLU ASN SER SEQRES 22 A 406 LYS ASP VAL VAL VAL THR ASN PHE PHE ILE ASP THR GLY SEQRES 23 A 406 SER ASN ILE LEU ASP TYR LEU ASP THR ILE GLY HIS VAL SEQRES 24 A 406 LEU LYS PRO GLY GLY ILE TRP CYS ASN PHE GLY PRO LEU SEQRES 25 A 406 LEU TYR HIS PHE GLU ASN ASP HIS GLY VAL GLU THR THR SEQRES 26 A 406 TYR GLU VAL ASN PRO TYR SER GLY PHE GLN ASP LYS ILE SEQRES 27 A 406 ASN ASP TYR THR PRO LEU MET GLY LEU GLU LEU SER SER SEQRES 28 A 406 ASP ASP ILE ILE SER ILE ALA THR ASN HIS LEU ASP PHE SEQRES 29 A 406 GLU LEU ILE ARG ARG GLU SER GLY ILE LEU CYS GLY TYR SEQRES 30 A 406 GLY ARG TYR ALA GLY PRO GLU SER CYS ALA MET PRO GLY SEQRES 31 A 406 TYR MET CYS HIS TYR TRP ILE LEU LYS SER ASN PRO THR SEQRES 32 A 406 ASN GLU SER SEQRES 1 B 406 GLY PRO HIS MET ALA SER MET ASP GLU ASN GLU PHE ASP SEQRES 2 B 406 ASN GLN ARG GLU ASN LYS ALA VAL ALA ARG VAL ILE ILE SEQRES 3 B 406 SER PHE LEU LYS TYR GLU GLU TYR ALA LEU LYS GLU ILE SEQRES 4 B 406 TYR ASN LEU ARG VAL LYS LYS TRP ALA SER ILE SER ASP SEQRES 5 B 406 ARG GLN LYS ASP MET VAL PRO ASN TYR THR LYS TYR LEU SEQRES 6 B 406 ALA ASN LEU LYS ALA ALA ILE ILE GLU ASN GLY LYS PHE SEQRES 7 B 406 PHE ARG SER VAL ALA GLU TYR ALA LEU GLN SER ILE SER SEQRES 8 B 406 PHE GLU PRO GLY GLU ILE VAL GLN PRO ASN ASP LEU ASP SEQRES 9 B 406 MET SER LYS THR CYS SER LEU LEU THR GLN VAL TYR ARG SEQRES 10 B 406 GLU TRP SER ALA GLU ALA ILE SER GLU ARG ASN CYS LEU SEQRES 11 B 406 ASN SER ARG LEU VAL PRO PHE LEU LYS THR LEU SER PRO SEQRES 12 B 406 PRO LYS ALA ASP ILE LEU ILE PRO GLY CYS GLY THR GLY SEQRES 13 B 406 ARG LEU LEU VAL ASP LEU SER ARG MET GLY TYR ASN CYS SEQRES 14 B 406 GLU GLY ASN GLU PHE SER TYR HIS MET LEU LEU VAL SER SEQRES 15 B 406 GLN TYR MET LEU ASN ALA GLY LEU LEU GLN ASN GLN ILE SEQRES 16 B 406 ILE ILE TYR PRO PHE ILE HIS CYS PHE SER HIS TRP LYS SEQRES 17 B 406 LYS ILE GLU ASP GLN LEU SER PRO ILE LYS VAL PRO ASP SEQRES 18 B 406 ILE GLU ALA TRP SER SER ASN LYS GLY MET GLY SER MET SEQRES 19 B 406 SER ILE CYS ALA GLY SER PHE VAL ASP CYS TYR GLY ARG SEQRES 20 B 406 ASN GLN GLY THR LYS ILE SER SER HIS TYR THR PHE SER SEQRES 21 B 406 ARG ARG MET GLN LEU SER ARG ALA LYS ALA GLU ASN SER SEQRES 22 B 406 LYS ASP VAL VAL VAL THR ASN PHE PHE ILE ASP THR GLY SEQRES 23 B 406 SER ASN ILE LEU ASP TYR LEU ASP THR ILE GLY HIS VAL SEQRES 24 B 406 LEU LYS PRO GLY GLY ILE TRP CYS ASN PHE GLY PRO LEU SEQRES 25 B 406 LEU TYR HIS PHE GLU ASN ASP HIS GLY VAL GLU THR THR SEQRES 26 B 406 TYR GLU VAL ASN PRO TYR SER GLY PHE GLN ASP LYS ILE SEQRES 27 B 406 ASN ASP TYR THR PRO LEU MET GLY LEU GLU LEU SER SER SEQRES 28 B 406 ASP ASP ILE ILE SER ILE ALA THR ASN HIS LEU ASP PHE SEQRES 29 B 406 GLU LEU ILE ARG ARG GLU SER GLY ILE LEU CYS GLY TYR SEQRES 30 B 406 GLY ARG TYR ALA GLY PRO GLU SER CYS ALA MET PRO GLY SEQRES 31 B 406 TYR MET CYS HIS TYR TRP ILE LEU LYS SER ASN PRO THR SEQRES 32 B 406 ASN GLU SER HET SAH A 501 26 HET SAH B 501 26 HET NA B 502 1 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM NA SODIUM ION FORMUL 3 SAH 2(C14 H20 N6 O5 S) FORMUL 5 NA NA 1+ FORMUL 6 HOH *212(H2 O) HELIX 1 AA1 ASN A 8 LYS A 24 1 17 HELIX 2 AA2 LYS A 24 TYR A 34 1 11 HELIX 3 AA3 TYR A 34 ILE A 44 1 11 HELIX 4 AA4 SER A 45 VAL A 52 1 8 HELIX 5 AA5 ASN A 54 GLN A 82 1 29 HELIX 6 AA6 ASN A 95 SER A 114 1 20 HELIX 7 AA7 ALA A 117 SER A 136 1 20 HELIX 8 AA8 GLY A 150 MET A 159 1 10 HELIX 9 AA9 SER A 169 ALA A 182 1 14 HELIX 10 AB1 LYS A 203 SER A 209 5 7 HELIX 11 AB2 SER A 234 GLY A 240 1 7 HELIX 12 AB3 SER A 254 GLU A 265 1 12 HELIX 13 AB4 ASN A 282 VAL A 293 1 12 HELIX 14 AB5 SER A 344 LEU A 356 1 13 HELIX 15 AB6 ARG B 10 LYS B 24 1 15 HELIX 16 AB7 LYS B 24 TYR B 34 1 11 HELIX 17 AB8 TYR B 34 ILE B 44 1 11 HELIX 18 AB9 SER B 45 VAL B 52 1 8 HELIX 19 AC1 ASN B 54 GLN B 82 1 29 HELIX 20 AC2 GLU B 87 ILE B 91 5 5 HELIX 21 AC3 ASN B 95 SER B 114 1 20 HELIX 22 AC4 ALA B 117 SER B 136 1 20 HELIX 23 AC5 GLY B 150 MET B 159 1 10 HELIX 24 AC6 SER B 169 ALA B 182 1 14 HELIX 25 AC7 LYS B 203 SER B 209 5 7 HELIX 26 AC8 SER B 234 GLY B 240 1 7 HELIX 27 AC9 SER B 254 GLU B 265 1 12 HELIX 28 AD1 ASN B 282 VAL B 293 1 12 HELIX 29 AD2 SER B 344 LEU B 356 1 13 SHEET 1 AA1 7 MET A 228 ALA A 232 0 SHEET 2 AA1 7 ASN A 162 GLU A 167 1 N GLY A 165 O SER A 229 SHEET 3 AA1 7 ASP A 141 PRO A 145 1 N ILE A 142 O ASN A 162 SHEET 4 AA1 7 LYS A 268 ASN A 274 1 O VAL A 270 N LEU A 143 SHEET 5 AA1 7 LEU A 294 GLY A 304 1 O CYS A 301 N VAL A 271 SHEET 6 AA1 7 TYR A 385 SER A 394 -1 O HIS A 388 N GLY A 304 SHEET 7 AA1 7 PHE A 358 CYS A 369 -1 N ILE A 361 O ILE A 391 SHEET 1 AA2 2 ILE A 189 ILE A 191 0 SHEET 2 AA2 2 ILE A 211 VAL A 213 -1 O VAL A 213 N ILE A 189 SHEET 1 AA3 2 VAL A 316 THR A 319 0 SHEET 2 AA3 2 ASN A 333 PRO A 337 -1 O THR A 336 N GLU A 317 SHEET 1 AA4 7 MET B 228 ALA B 232 0 SHEET 2 AA4 7 ASN B 162 GLU B 167 1 N GLY B 165 O SER B 229 SHEET 3 AA4 7 ASP B 141 PRO B 145 1 N ILE B 142 O ASN B 162 SHEET 4 AA4 7 LYS B 268 ASN B 274 1 O VAL B 270 N LEU B 143 SHEET 5 AA4 7 LEU B 294 GLY B 304 1 O CYS B 301 N VAL B 271 SHEET 6 AA4 7 TYR B 385 SER B 394 -1 O SER B 394 N GLY B 298 SHEET 7 AA4 7 PHE B 358 CYS B 369 -1 N ILE B 361 O ILE B 391 SHEET 1 AA5 2 ILE B 189 ILE B 191 0 SHEET 2 AA5 2 ILE B 211 VAL B 213 -1 O VAL B 213 N ILE B 189 SHEET 1 AA6 2 VAL B 316 VAL B 322 0 SHEET 2 AA6 2 GLN B 329 PRO B 337 -1 O ASN B 333 N THR B 319 SSBOND 1 CYS A 123 CYS A 369 1555 1555 2.05 SSBOND 2 CYS A 231 CYS A 238 1555 1555 2.06 SSBOND 3 CYS B 123 CYS B 369 1555 1555 2.06 SSBOND 4 CYS B 231 CYS B 238 1555 1555 2.07 LINK OD1 ASN B 266 NA NA B 502 1555 1555 2.30 LINK O GLY B 291 NA NA B 502 1555 1555 2.42 LINK O HIS B 292 NA NA B 502 1555 1555 2.38 LINK O LEU B 294 NA NA B 502 1555 1555 2.23 LINK NA NA B 502 O HOH B 700 1555 1555 2.20 LINK NA NA B 502 O HOH B 704 1555 1555 2.18 CISPEP 1 VAL A 213 PRO A 214 0 -7.56 CISPEP 2 ASN A 323 PRO A 324 0 -2.46 CISPEP 3 PRO B 138 LYS B 139 0 0.26 CISPEP 4 VAL B 213 PRO B 214 0 -6.58 SITE 1 AC1 18 GLN A 108 ARG A 111 GLY A 146 ASN A 166 SITE 2 AC1 18 GLU A 167 PHE A 168 SER A 169 MET A 172 SITE 3 AC1 18 GLY A 233 SER A 234 PHE A 235 ASN A 274 SITE 4 AC1 18 PHE A 275 THR A 279 TYR A 286 TYR A 371 SITE 5 AC1 18 HOH A 601 HOH A 664 SITE 1 AC2 21 GLN B 108 ARG B 111 GLY B 146 GLY B 148 SITE 2 AC2 21 ASN B 166 GLU B 167 PHE B 168 SER B 169 SITE 3 AC2 21 MET B 172 GLY B 233 SER B 234 PHE B 235 SITE 4 AC2 21 ASN B 274 PHE B 275 PHE B 276 THR B 279 SITE 5 AC2 21 TYR B 286 TYR B 371 HOH B 605 HOH B 651 SITE 6 AC2 21 HOH B 670 SITE 1 AC3 6 ASN B 266 GLY B 291 HIS B 292 LEU B 294 SITE 2 AC3 6 HOH B 700 HOH B 704 CRYST1 71.537 72.902 175.235 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013979 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013717 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005707 0.00000