HEADER CONTRACTILE PROTEIN 13-APR-17 5XGG TITLE CRYSTAL STRUCTURE C-TERMINAL SH3 DOMAIN OF MYOSIN IB FROM ENTAMOEBA TITLE 2 HISTOLYTICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCONVENTIONAL MYOSIN IB; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 FRAGMENT: SH3 DOMAIN, UNP RESIDUES 995-1049; COMPND 5 SYNONYM: UNCONVENTIONAL MYOSIN IB; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 3 ORGANISM_TAXID: 5759; SOURCE 4 STRAIN: HM-1:IMSS; SOURCE 5 GENE: CL6EHI_110810, EHI_110810; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-21C KEYWDS SH3, MYOSINI, ENTAMOEBA HISTOLYTICA, EHMYSH3, CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.GAUTAM,S.GOURINATH REVDAT 2 22-NOV-23 5XGG 1 REMARK REVDAT 1 16-AUG-17 5XGG 0 JRNL AUTH G.GAUTAM,S.A.A.REHMAN,P.PANDEY,S.GOURINATH JRNL TITL CRYSTAL STRUCTURE OF THE PEG-BOUND SH3 DOMAIN OF MYOSIN IB JRNL TITL 2 FROM ENTAMOEBA HISTOLYTICA REVEALS ITS MODE OF LIGAND JRNL TITL 3 RECOGNITION JRNL REF ACTA CRYSTALLOGR D STRUCT V. 73 672 2017 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 28777082 JRNL DOI 10.1107/S2059798317009639 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 47114 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2512 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.72 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3511 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2120 REMARK 3 BIN FREE R VALUE SET COUNT : 170 REMARK 3 BIN FREE R VALUE : 0.2630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3061 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 646 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.38000 REMARK 3 B22 (A**2) : -0.18000 REMARK 3 B33 (A**2) : 0.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.110 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.108 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.099 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3156 ; 0.023 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2888 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4293 ; 1.969 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6679 ; 1.040 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 374 ; 5.422 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;36.862 ;26.346 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 521 ;12.746 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 446 ; 0.130 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3560 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 698 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1514 ; 1.534 ; 1.201 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1513 ; 1.526 ; 1.200 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1882 ; 2.273 ; 1.790 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1883 ; 2.273 ; 1.791 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1642 ; 2.884 ; 1.552 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1635 ; 2.880 ; 1.549 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2399 ; 4.354 ; 2.182 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4226 ; 7.762 ;13.360 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3751 ; 6.893 ;11.353 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 2. THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS IN F_PLUS/ REMARK 3 MINUS AND I_PLUS/MINUS COLUMNS. REMARK 4 REMARK 4 5XGG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-APR-17. REMARK 100 THE DEPOSITION ID IS D_1300003468. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101866 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 77.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : 0.11000 REMARK 200 FOR THE DATA SET : 4.1700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : 0.43000 REMARK 200 FOR SHELL : 4.170 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4IIM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2M AMMONIUM SULPHATE, 5% V/V REMARK 280 ISOPROPANOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.83500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 63 REMARK 465 HIS A 64 REMARK 465 HIS B 63 REMARK 465 HIS B 64 REMARK 465 HIS C 63 REMARK 465 HIS C 64 REMARK 465 HIS D 63 REMARK 465 HIS D 64 REMARK 465 HIS E 64 REMARK 465 GLU F 58 REMARK 465 HIS F 59 REMARK 465 HIS F 60 REMARK 465 HIS F 61 REMARK 465 HIS F 62 REMARK 465 HIS F 63 REMARK 465 HIS F 64 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 59 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 62 CG ND1 CD2 CE1 NE2 REMARK 470 GLU C 17 CG CD OE1 OE2 REMARK 470 LEU C 57 CG CD1 CD2 REMARK 470 HIS C 60 CG ND1 CD2 CE1 NE2 REMARK 470 GLU E 34 CG CD OE1 OE2 REMARK 470 HIS E 60 CG ND1 CD2 CE1 NE2 REMARK 470 HIS E 62 CG ND1 CD2 CE1 NE2 REMARK 470 HIS E 63 CG ND1 CD2 CE1 NE2 REMARK 470 LEU F 57 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 280 O HOH B 303 1.83 REMARK 500 O HOH A 113 O HOH A 131 1.95 REMARK 500 O HOH E 188 O HOH E 197 1.97 REMARK 500 O HOH F 102 O HOH F 172 1.99 REMARK 500 O HOH C 184 O HOH C 186 2.04 REMARK 500 O HOH D 284 O HOH D 310 2.10 REMARK 500 NE2 GLN F 44 O HOH F 101 2.10 REMARK 500 O HOH F 107 O HOH F 167 2.10 REMARK 500 O HOH E 199 O HOH E 225 2.11 REMARK 500 O HOH B 257 O HOH D 225 2.12 REMARK 500 O HOH D 262 O HOH D 285 2.14 REMARK 500 O HOH A 177 O HOH A 183 2.14 REMARK 500 OE1 GLU A 40 O HOH A 101 2.15 REMARK 500 O HOH F 119 O HOH F 183 2.16 REMARK 500 OE1 GLU F 40 O HOH F 102 2.17 REMARK 500 NZ LYS C 22 O HOH C 101 2.18 REMARK 500 O HOH A 101 O HOH A 146 2.18 REMARK 500 O HOH D 291 O HOH D 292 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 269 O HOH C 184 2556 1.86 REMARK 500 O HOH A 172 O HOH C 184 2656 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 34 -118.21 52.40 REMARK 500 GLU B 34 -114.54 60.71 REMARK 500 GLU C 34 -123.66 70.56 REMARK 500 GLU D 34 -115.74 53.88 REMARK 500 GLU E 34 -128.61 59.22 REMARK 500 GLU F 34 -114.81 56.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5XG9 RELATED DB: PDB DBREF 5XGG A 2 56 UNP C4LUC7 C4LUC7_ENTHI 995 1049 DBREF 5XGG B 2 56 UNP C4LUC7 C4LUC7_ENTHI 995 1049 DBREF 5XGG C 2 56 UNP C4LUC7 C4LUC7_ENTHI 995 1049 DBREF 5XGG D 2 56 UNP C4LUC7 C4LUC7_ENTHI 995 1049 DBREF 5XGG E 2 56 UNP C4LUC7 C4LUC7_ENTHI 995 1049 DBREF 5XGG F 2 56 UNP C4LUC7 C4LUC7_ENTHI 995 1049 SEQADV 5XGG ALA A -1 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG SER A 0 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG MET A 1 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG LEU A 57 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG GLU A 58 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS A 59 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS A 60 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS A 61 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS A 62 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS A 63 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS A 64 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG ALA B -1 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG SER B 0 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG MET B 1 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG LEU B 57 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG GLU B 58 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS B 59 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS B 60 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS B 61 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS B 62 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS B 63 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS B 64 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG ALA C -1 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG SER C 0 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG MET C 1 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG LEU C 57 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG GLU C 58 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS C 59 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS C 60 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS C 61 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS C 62 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS C 63 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS C 64 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG ALA D -1 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG SER D 0 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG MET D 1 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG LEU D 57 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG GLU D 58 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS D 59 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS D 60 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS D 61 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS D 62 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS D 63 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS D 64 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG ALA E -1 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG SER E 0 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG MET E 1 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG LEU E 57 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG GLU E 58 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS E 59 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS E 60 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS E 61 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS E 62 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS E 63 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS E 64 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG ALA F -1 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG SER F 0 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG MET F 1 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG LEU F 57 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG GLU F 58 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS F 59 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS F 60 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS F 61 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS F 62 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS F 63 UNP C4LUC7 EXPRESSION TAG SEQADV 5XGG HIS F 64 UNP C4LUC7 EXPRESSION TAG SEQRES 1 A 66 ALA SER MET LEU PRO GLN VAL LYS ALA LEU TYR PRO TYR SEQRES 2 A 66 THR ALA ALA ASN ASP GLU GLU LEU SER PHE LYS VAL GLY SEQRES 3 A 66 ASP ILE ILE THR ILE LEU GLU LYS ASP GLU GLY TRP TRP SEQRES 4 A 66 LYS GLY GLU LEU ASN GLY GLN GLU GLY TRP ILE PRO ASN SEQRES 5 A 66 ASN TYR VAL LYS GLU ILE LEU GLU HIS HIS HIS HIS HIS SEQRES 6 A 66 HIS SEQRES 1 B 66 ALA SER MET LEU PRO GLN VAL LYS ALA LEU TYR PRO TYR SEQRES 2 B 66 THR ALA ALA ASN ASP GLU GLU LEU SER PHE LYS VAL GLY SEQRES 3 B 66 ASP ILE ILE THR ILE LEU GLU LYS ASP GLU GLY TRP TRP SEQRES 4 B 66 LYS GLY GLU LEU ASN GLY GLN GLU GLY TRP ILE PRO ASN SEQRES 5 B 66 ASN TYR VAL LYS GLU ILE LEU GLU HIS HIS HIS HIS HIS SEQRES 6 B 66 HIS SEQRES 1 C 66 ALA SER MET LEU PRO GLN VAL LYS ALA LEU TYR PRO TYR SEQRES 2 C 66 THR ALA ALA ASN ASP GLU GLU LEU SER PHE LYS VAL GLY SEQRES 3 C 66 ASP ILE ILE THR ILE LEU GLU LYS ASP GLU GLY TRP TRP SEQRES 4 C 66 LYS GLY GLU LEU ASN GLY GLN GLU GLY TRP ILE PRO ASN SEQRES 5 C 66 ASN TYR VAL LYS GLU ILE LEU GLU HIS HIS HIS HIS HIS SEQRES 6 C 66 HIS SEQRES 1 D 66 ALA SER MET LEU PRO GLN VAL LYS ALA LEU TYR PRO TYR SEQRES 2 D 66 THR ALA ALA ASN ASP GLU GLU LEU SER PHE LYS VAL GLY SEQRES 3 D 66 ASP ILE ILE THR ILE LEU GLU LYS ASP GLU GLY TRP TRP SEQRES 4 D 66 LYS GLY GLU LEU ASN GLY GLN GLU GLY TRP ILE PRO ASN SEQRES 5 D 66 ASN TYR VAL LYS GLU ILE LEU GLU HIS HIS HIS HIS HIS SEQRES 6 D 66 HIS SEQRES 1 E 66 ALA SER MET LEU PRO GLN VAL LYS ALA LEU TYR PRO TYR SEQRES 2 E 66 THR ALA ALA ASN ASP GLU GLU LEU SER PHE LYS VAL GLY SEQRES 3 E 66 ASP ILE ILE THR ILE LEU GLU LYS ASP GLU GLY TRP TRP SEQRES 4 E 66 LYS GLY GLU LEU ASN GLY GLN GLU GLY TRP ILE PRO ASN SEQRES 5 E 66 ASN TYR VAL LYS GLU ILE LEU GLU HIS HIS HIS HIS HIS SEQRES 6 E 66 HIS SEQRES 1 F 66 ALA SER MET LEU PRO GLN VAL LYS ALA LEU TYR PRO TYR SEQRES 2 F 66 THR ALA ALA ASN ASP GLU GLU LEU SER PHE LYS VAL GLY SEQRES 3 F 66 ASP ILE ILE THR ILE LEU GLU LYS ASP GLU GLY TRP TRP SEQRES 4 F 66 LYS GLY GLU LEU ASN GLY GLN GLU GLY TRP ILE PRO ASN SEQRES 5 F 66 ASN TYR VAL LYS GLU ILE LEU GLU HIS HIS HIS HIS HIS SEQRES 6 F 66 HIS HET SO4 B 101 5 HET SO4 D 101 5 HETNAM SO4 SULFATE ION FORMUL 7 SO4 2(O4 S 2-) FORMUL 9 HOH *646(H2 O) SHEET 1 AA1 5 GLN A 44 PRO A 49 0 SHEET 2 AA1 5 TRP A 36 LEU A 41 -1 N GLY A 39 O GLY A 46 SHEET 3 AA1 5 ILE A 26 ASP A 33 -1 N GLU A 31 O LYS A 38 SHEET 4 AA1 5 GLN A 4 ALA A 7 -1 N VAL A 5 O ILE A 27 SHEET 5 AA1 5 VAL A 53 GLU A 55 -1 O LYS A 54 N LYS A 6 SHEET 1 AA2 6 SER B 0 MET B 1 0 SHEET 2 AA2 6 GLN D 44 PRO D 49 -1 O GLU D 45 N SER B 0 SHEET 3 AA2 6 TRP D 36 LEU D 41 -1 N GLY D 39 O GLY D 46 SHEET 4 AA2 6 ILE D 26 ASP D 33 -1 N LEU D 30 O LYS D 38 SHEET 5 AA2 6 GLN D 4 ALA D 7 -1 N VAL D 5 O ILE D 27 SHEET 6 AA2 6 VAL D 53 GLU D 55 -1 O LYS D 54 N LYS D 6 SHEET 1 AA3 6 VAL B 53 GLU B 55 0 SHEET 2 AA3 6 GLN B 4 ALA B 7 -1 N LYS B 6 O LYS B 54 SHEET 3 AA3 6 ILE B 26 ASP B 33 -1 O ILE B 27 N VAL B 5 SHEET 4 AA3 6 TRP B 36 LEU B 41 -1 O LYS B 38 N LEU B 30 SHEET 5 AA3 6 GLN B 44 PRO B 49 -1 O GLY B 46 N GLY B 39 SHEET 6 AA3 6 SER D 0 MET D 1 -1 O SER D 0 N GLU B 45 SHEET 1 AA4 5 GLN C 44 PRO C 49 0 SHEET 2 AA4 5 TRP C 36 LEU C 41 -1 N TRP C 37 O ILE C 48 SHEET 3 AA4 5 ILE C 26 ASP C 33 -1 N LEU C 30 O LYS C 38 SHEET 4 AA4 5 GLN C 4 ALA C 7 -1 N VAL C 5 O ILE C 27 SHEET 5 AA4 5 VAL C 53 GLU C 55 -1 O LYS C 54 N LYS C 6 SHEET 1 AA5 5 GLN E 44 PRO E 49 0 SHEET 2 AA5 5 TRP E 36 LEU E 41 -1 N GLY E 39 O GLY E 46 SHEET 3 AA5 5 ILE E 26 ASP E 33 -1 N LEU E 30 O LYS E 38 SHEET 4 AA5 5 GLN E 4 ALA E 7 -1 N VAL E 5 O ILE E 27 SHEET 5 AA5 5 VAL E 53 GLU E 55 -1 O LYS E 54 N LYS E 6 SHEET 1 AA6 5 GLN F 44 PRO F 49 0 SHEET 2 AA6 5 TRP F 36 LEU F 41 -1 N GLY F 39 O GLY F 46 SHEET 3 AA6 5 ILE F 26 ASP F 33 -1 N GLU F 31 O LYS F 38 SHEET 4 AA6 5 GLN F 4 ALA F 7 -1 N VAL F 5 O ILE F 27 SHEET 5 AA6 5 VAL F 53 ILE F 56 -1 O ILE F 56 N GLN F 4 SITE 1 AC1 6 GLU B 58 HIS B 59 HIS B 60 HIS B 62 SITE 2 AC1 6 HOH B 239 HOH B 259 SITE 1 AC2 6 GLU D 58 HIS D 59 HIS D 60 HIS D 62 SITE 2 AC2 6 HOH D 259 HOH D 266 CRYST1 52.110 77.670 61.830 90.00 108.24 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019190 0.000000 0.006324 0.00000 SCALE2 0.000000 0.012875 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017029 0.00000