HEADER TRANSFERASE 28-APR-17 5XJ1 TITLE CRYSTAL STRUCTURE OF SPRLMCD COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED RNA METHYLTRANSFERASE SP_1029; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-454; COMPND 5 EC: 2.1.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE SEROTYPE 4 (STRAIN SOURCE 3 ATCC BAA-334 / TIGR4); SOURCE 4 ORGANISM_TAXID: 170187; SOURCE 5 STRAIN: ATCC BAA-334 / TIGR4; SOURCE 6 GENE: SP_1029; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD(DE3)PLYSS AG; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28ASUMO KEYWDS 23S RRNA, U747, METHYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.JIANG,Q.GONG REVDAT 2 22-NOV-23 5XJ1 1 REMARK REVDAT 1 01-NOV-17 5XJ1 0 JRNL AUTH Y.JIANG,F.LI,J.WU,Y.SHI,Q.GONG JRNL TITL STRUCTURAL INSIGHTS INTO SUBSTRATE SELECTIVITY OF RIBOSOMAL JRNL TITL 2 RNA METHYLTRANSFERASE RLMCD JRNL REF PLOS ONE V. 12 85226 2017 JRNL REFN ESSN 1932-6203 JRNL PMID 28949991 JRNL DOI 10.1371/JOURNAL.PONE.0185226 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 3 NUMBER OF REFLECTIONS : 51125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.5965 - 4.2241 1.00 3825 159 0.1654 0.1881 REMARK 3 2 4.2241 - 3.3534 1.00 3802 155 0.1577 0.1850 REMARK 3 3 3.3534 - 2.9297 1.00 3774 148 0.1752 0.2021 REMARK 3 4 2.9297 - 2.6619 1.00 3796 157 0.1866 0.2191 REMARK 3 5 2.6619 - 2.4711 1.00 3790 154 0.1808 0.1769 REMARK 3 6 2.4711 - 2.3255 1.00 3752 153 0.1776 0.1986 REMARK 3 7 2.3255 - 2.2090 1.00 3770 151 0.1725 0.2227 REMARK 3 8 2.2090 - 2.1129 1.00 3756 161 0.1766 0.1950 REMARK 3 9 2.1129 - 2.0315 1.00 3755 151 0.1813 0.2216 REMARK 3 10 2.0315 - 1.9614 1.00 3768 156 0.1781 0.2021 REMARK 3 11 1.9614 - 1.9001 0.99 3775 144 0.1888 0.2330 REMARK 3 12 1.9001 - 1.8458 1.00 3744 154 0.2114 0.2543 REMARK 3 13 1.8458 - 1.7972 0.81 3035 115 0.2403 0.2842 REMARK 3 14 1.7972 - 1.7534 0.21 790 35 0.2443 0.2913 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3708 REMARK 3 ANGLE : 0.889 5006 REMARK 3 CHIRALITY : 0.060 570 REMARK 3 PLANARITY : 0.005 639 REMARK 3 DIHEDRAL : 14.176 2265 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.7774 -26.6868 12.6639 REMARK 3 T TENSOR REMARK 3 T11: 0.2440 T22: 0.2735 REMARK 3 T33: 0.2942 T12: 0.0833 REMARK 3 T13: 0.0301 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 2.0209 L22: 1.8216 REMARK 3 L33: 1.6616 L12: -0.7240 REMARK 3 L13: -0.3581 L23: -0.2326 REMARK 3 S TENSOR REMARK 3 S11: -0.1977 S12: -0.1332 S13: 0.0941 REMARK 3 S21: 0.3964 S22: 0.2117 S23: 0.2062 REMARK 3 S31: -0.1174 S32: -0.3891 S33: -0.0318 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.9573 -24.7898 7.1495 REMARK 3 T TENSOR REMARK 3 T11: 0.1893 T22: 0.1482 REMARK 3 T33: 0.2018 T12: 0.0215 REMARK 3 T13: -0.0294 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 0.8294 L22: 0.6484 REMARK 3 L33: 0.2507 L12: 0.2930 REMARK 3 L13: -0.4088 L23: -0.2123 REMARK 3 S TENSOR REMARK 3 S11: -0.0849 S12: -0.0531 S13: 0.0409 REMARK 3 S21: 0.0384 S22: 0.0624 S23: 0.0130 REMARK 3 S31: -0.0131 S32: -0.0689 S33: 0.0076 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 285 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4211 -3.4457 14.5077 REMARK 3 T TENSOR REMARK 3 T11: 0.1499 T22: 0.1915 REMARK 3 T33: 0.1942 T12: 0.0137 REMARK 3 T13: -0.0000 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.7272 L22: 1.1204 REMARK 3 L33: 1.3565 L12: 0.4756 REMARK 3 L13: 0.1635 L23: 0.0502 REMARK 3 S TENSOR REMARK 3 S11: 0.0547 S12: -0.1091 S13: 0.0860 REMARK 3 S21: 0.0822 S22: -0.0604 S23: 0.0660 REMARK 3 S31: -0.1077 S32: 0.0317 S33: 0.0075 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 286 THROUGH 453 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8174 -4.6883 -13.9664 REMARK 3 T TENSOR REMARK 3 T11: 0.2048 T22: 0.1681 REMARK 3 T33: 0.1573 T12: 0.0006 REMARK 3 T13: 0.0065 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.5211 L22: 1.2376 REMARK 3 L33: 0.9585 L12: 0.2763 REMARK 3 L13: 0.2685 L23: -0.3300 REMARK 3 S TENSOR REMARK 3 S11: -0.0376 S12: 0.0928 S13: 0.0193 REMARK 3 S21: -0.2246 S22: 0.0526 S23: 0.0769 REMARK 3 S31: 0.0152 S32: 0.0387 S33: -0.0145 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XJ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1300003616. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9776 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000, HKL-2000, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51160 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.56700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1UWV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES.NA, 45% PEG600, PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.88600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 454 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 381 O HOH A 601 2.14 REMARK 500 O HOH A 834 O HOH A 851 2.14 REMARK 500 OH TYR A 282 O HOH A 602 2.17 REMARK 500 O HOH A 606 O HOH A 616 2.19 REMARK 500 O HOH A 831 O HOH A 837 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 38 -6.33 75.84 REMARK 500 ASN A 49 -165.61 -104.19 REMARK 500 PHE A 160 -58.36 68.93 REMARK 500 TYR A 312 69.19 62.16 REMARK 500 GLN A 438 -8.28 78.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE A 41 LEU A 42 149.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 856 DISTANCE = 6.18 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 P6G A 503 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE A 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5XJ2 RELATED DB: PDB DBREF 5XJ1 A 1 454 UNP Q97R12 Y1029_STRPN 1 454 SEQRES 1 A 454 MET LEU LYS LYS ASN ASP ILE VAL GLU VAL GLU ILE VAL SEQRES 2 A 454 ASP LEU THR HIS GLU GLY ALA GLY VAL ALA LYS VAL ASP SEQRES 3 A 454 GLY LEU VAL PHE PHE VAL GLU ASN ALA LEU PRO SER GLU SEQRES 4 A 454 LYS ILE LEU MET ARG VAL LEU LYS VAL ASN LYS LYS ILE SEQRES 5 A 454 GLY PHE GLY LYS VAL GLU LYS TYR LEU VAL GLN SER PRO SEQRES 6 A 454 HIS ARG ASN GLN ASP LEU ASP LEU ALA TYR LEU ARG SER SEQRES 7 A 454 GLY ILE ALA ASP LEU GLY HIS LEU SER TYR PRO GLU GLN SEQRES 8 A 454 LEU LYS PHE LYS THR LYS GLN VAL LYS ASP SER LEU TYR SEQRES 9 A 454 LYS ILE ALA GLY ILE ALA ASP VAL GLU VAL ALA GLU THR SEQRES 10 A 454 LEU GLY MET GLU HIS PRO VAL LYS TYR ARG ASN LYS ALA SEQRES 11 A 454 GLN VAL PRO VAL ARG ARG VAL ASN GLY VAL LEU GLU THR SEQRES 12 A 454 GLY PHE PHE ARG LYS ASN SER HIS ASN LEU MET PRO LEU SEQRES 13 A 454 GLU ASP PHE PHE ILE GLN ASP PRO VAL ILE ASP GLN VAL SEQRES 14 A 454 VAL VAL ALA LEU ARG ASP LEU LEU ARG ARG PHE ASP LEU SEQRES 15 A 454 LYS PRO TYR ASP GLU LYS GLU GLN SER GLY LEU ILE ARG SEQRES 16 A 454 ASN LEU VAL VAL ARG ARG GLY HIS TYR SER GLY GLN ILE SEQRES 17 A 454 MET VAL VAL LEU VAL THR THR ARG PRO LYS VAL PHE ARG SEQRES 18 A 454 VAL ASP GLN LEU ILE GLU GLN VAL ILE LYS GLN PHE PRO SEQRES 19 A 454 GLU ILE VAL SER VAL MET GLN ASN ILE ASN ASP GLN ASN SEQRES 20 A 454 THR ASN ALA ILE PHE GLY LYS GLU TRP ARG THR LEU TYR SEQRES 21 A 454 GLY GLN ASP TYR ILE THR ASP GLN MET LEU GLY ASN ASP SEQRES 22 A 454 PHE GLN ILE ALA GLY PRO ALA PHE TYR GLN VAL ASN THR SEQRES 23 A 454 GLU MET ALA GLU LYS LEU TYR GLN THR ALA ILE ASP PHE SEQRES 24 A 454 ALA GLU LEU LYS LYS ASP ASP VAL ILE ILE ASP ALA TYR SEQRES 25 A 454 SER GLY ILE GLY THR ILE GLY LEU SER VAL ALA LYS HIS SEQRES 26 A 454 VAL LYS GLU VAL TYR GLY VAL GLU LEU ILE PRO GLU ALA SEQRES 27 A 454 VAL GLU ASN SER GLN LYS ASN ALA SER LEU ASN LYS ILE SEQRES 28 A 454 THR ASN ALA HIS TYR VAL CYS ASP THR ALA GLU ASN ALA SEQRES 29 A 454 MET LYS LYS TRP LEU LYS GLU GLY ILE GLN PRO THR VAL SEQRES 30 A 454 ILE LEU VAL ASP PRO PRO ARG LYS GLY LEU THR GLU SER SEQRES 31 A 454 PHE ILE LYS ALA SER ALA GLN THR GLY ALA ASP ARG ILE SEQRES 32 A 454 ALA TYR ILE SER CYS ASN VAL ALA THR MET ALA ARG ASP SEQRES 33 A 454 ILE LYS LEU TYR GLN GLU LEU GLY TYR GLU LEU LYS LYS SEQRES 34 A 454 VAL GLN PRO VAL ASP LEU PHE PRO GLN THR HIS HIS VAL SEQRES 35 A 454 GLU THR VAL ALA LEU LEU SER LYS LEU ASP VAL ASP HET GOL A 501 6 HET GOL A 502 6 HET P6G A 503 16 HET EPE A 504 15 HETNAM GOL GLYCEROL HETNAM P6G HEXAETHYLENE GLYCOL HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN P6G POLYETHYLENE GLYCOL PEG400 HETSYN EPE HEPES FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 P6G C12 H26 O7 FORMUL 5 EPE C8 H18 N2 O4 S FORMUL 6 HOH *256(H2 O) HELIX 1 AA1 LEU A 73 SER A 78 1 6 HELIX 2 AA2 SER A 87 GLY A 108 1 22 HELIX 3 AA3 ASP A 163 PHE A 180 1 18 HELIX 4 AA4 ARG A 221 PHE A 233 1 13 HELIX 5 AA5 ASN A 285 GLU A 301 1 17 HELIX 6 AA6 GLY A 316 ALA A 323 1 8 HELIX 7 AA7 LYS A 324 VAL A 326 5 3 HELIX 8 AA8 ILE A 335 ASN A 349 1 15 HELIX 9 AA9 THR A 360 GLU A 371 1 12 HELIX 10 AB1 THR A 388 THR A 398 1 11 HELIX 11 AB2 ASN A 409 LEU A 423 1 15 SHEET 1 AA1 6 ILE A 7 GLU A 11 0 SHEET 2 AA1 6 LYS A 40 VAL A 48 -1 O MET A 43 N VAL A 8 SHEET 3 AA1 6 ILE A 52 VAL A 62 -1 O LYS A 56 N ARG A 44 SHEET 4 AA1 6 LEU A 28 VAL A 32 1 N PHE A 31 O GLY A 55 SHEET 5 AA1 6 GLY A 21 VAL A 25 -1 N ALA A 23 O PHE A 30 SHEET 6 AA1 6 ASP A 14 LEU A 15 -1 N ASP A 14 O VAL A 22 SHEET 1 AA2 7 LEU A 153 PRO A 155 0 SHEET 2 AA2 7 VAL A 140 PHE A 146 -1 N PHE A 145 O MET A 154 SHEET 3 AA2 7 LYS A 129 VAL A 137 -1 N ARG A 135 O GLU A 142 SHEET 4 AA2 7 ILE A 194 ARG A 201 -1 O VAL A 199 N ALA A 130 SHEET 5 AA2 7 ILE A 208 THR A 214 -1 O VAL A 211 N VAL A 198 SHEET 6 AA2 7 ILE A 236 ILE A 243 1 O MET A 240 N VAL A 210 SHEET 7 AA2 7 GLU A 255 GLY A 261 -1 O ARG A 257 N GLN A 241 SHEET 1 AA3 2 TYR A 264 MET A 269 0 SHEET 2 AA3 2 ASN A 272 ALA A 277 -1 O PHE A 274 N ASP A 267 SHEET 1 AA4 7 ALA A 354 CYS A 358 0 SHEET 2 AA4 7 GLU A 328 GLU A 333 1 N GLY A 331 O HIS A 355 SHEET 3 AA4 7 VAL A 307 ALA A 311 1 N ILE A 308 O GLU A 328 SHEET 4 AA4 7 VAL A 377 VAL A 380 1 O LEU A 379 N ILE A 309 SHEET 5 AA4 7 ARG A 402 SER A 407 1 O ILE A 406 N VAL A 380 SHEET 6 AA4 7 GLU A 443 SER A 449 -1 O THR A 444 N SER A 407 SHEET 7 AA4 7 GLU A 426 VAL A 433 -1 N GLU A 426 O SER A 449 SITE 1 AC1 4 GLU A 142 ARG A 174 ARG A 178 HOH A 716 SITE 1 AC2 4 ASP A 223 ILE A 226 GLU A 227 ILE A 230 SITE 1 AC3 10 GLY A 79 ARG A 127 ALA A 130 GLN A 131 SITE 2 AC3 10 VAL A 132 PHE A 145 PHE A 159 GLN A 162 SITE 3 AC3 10 HOH A 633 HOH A 782 SITE 1 AC4 9 PHE A 281 GLN A 283 TYR A 312 ASP A 381 SITE 2 AC4 9 PRO A 382 PRO A 383 CYS A 408 PHE A 436 SITE 3 AC4 9 HIS A 441 CRYST1 46.452 101.772 63.037 90.00 110.11 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021528 0.000000 0.007884 0.00000 SCALE2 0.000000 0.009826 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016894 0.00000