HEADER ELECTRON TRANSPORT 03-MAY-17 5XJN TITLE CYTOCHROME P450 CREJ IN COMPLEX WITH (4-ETHYLPHENYL) DIHYDROGEN TITLE 2 PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 25-430; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM (STRAIN ATCC 13032 / SOURCE 3 DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025); SOURCE 4 ORGANISM_TAXID: 196627; SOURCE 5 STRAIN: ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025; SOURCE 6 GENE: CGL0553; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS CYTOCHROME P450, COMPLEX, ELECTRON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR S.DONG,L.DU,S.LI,Y.FENG REVDAT 2 22-NOV-23 5XJN 1 REMARK REVDAT 1 12-JUL-17 5XJN 0 JRNL AUTH L.DU,S.DONG,X.ZHANG,C.JIANG,J.CHEN,L.YAO,X.WANG,X.WAN,X.LIU, JRNL AUTH 2 X.WANG,S.HUANG,Q.CUI,Y.FENG,S.J.LIU,S.LI JRNL TITL SELECTIVE OXIDATION OF ALIPHATIC C-H BONDS IN ALKYLPHENOLS JRNL TITL 2 BY A CHEMOMIMETIC BIOCATALYTIC SYSTEM JRNL REF PROC. NATL. ACAD. SCI. V. 114 E5129 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 28607077 JRNL DOI 10.1073/PNAS.1702317114 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 52190 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.830 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.4564 - 4.0953 0.97 3745 149 0.1859 0.1910 REMARK 3 2 4.0953 - 3.2513 1.00 3700 148 0.1554 0.1829 REMARK 3 3 3.2513 - 2.8405 1.00 3622 144 0.1792 0.1962 REMARK 3 4 2.8405 - 2.5809 1.00 3611 143 0.1756 0.2188 REMARK 3 5 2.5809 - 2.3959 1.00 3583 144 0.1785 0.2212 REMARK 3 6 2.3959 - 2.2547 1.00 3577 142 0.1770 0.2153 REMARK 3 7 2.2547 - 2.1418 1.00 3557 143 0.1816 0.1959 REMARK 3 8 2.1418 - 2.0486 1.00 3539 140 0.1800 0.2181 REMARK 3 9 2.0486 - 1.9697 1.00 3570 142 0.1841 0.2194 REMARK 3 10 1.9697 - 1.9017 1.00 3538 141 0.2128 0.2485 REMARK 3 11 1.9017 - 1.8423 1.00 3570 142 0.2231 0.2645 REMARK 3 12 1.8423 - 1.7896 1.00 3489 139 0.2043 0.2499 REMARK 3 13 1.7896 - 1.7425 1.00 3547 141 0.2046 0.2211 REMARK 3 14 1.7425 - 1.7000 1.00 3543 141 0.2093 0.2641 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.41 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3398 REMARK 3 ANGLE : 0.762 4634 REMARK 3 CHIRALITY : 0.042 492 REMARK 3 PLANARITY : 0.004 603 REMARK 3 DIHEDRAL : 10.279 2027 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.6648 -9.7104 -19.1379 REMARK 3 T TENSOR REMARK 3 T11: 0.1235 T22: 0.1668 REMARK 3 T33: 0.1447 T12: -0.0063 REMARK 3 T13: 0.0060 T23: 0.0483 REMARK 3 L TENSOR REMARK 3 L11: 1.5596 L22: 1.8615 REMARK 3 L33: 1.7870 L12: -0.1080 REMARK 3 L13: 0.3475 L23: 0.1849 REMARK 3 S TENSOR REMARK 3 S11: 0.0038 S12: -0.0562 S13: -0.0472 REMARK 3 S21: -0.0062 S22: 0.0471 S23: 0.2608 REMARK 3 S31: 0.1186 S32: -0.2736 S33: -0.0430 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.0794 0.2481 -12.0727 REMARK 3 T TENSOR REMARK 3 T11: 0.1285 T22: 0.1029 REMARK 3 T33: 0.1210 T12: 0.0243 REMARK 3 T13: 0.0121 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 1.7256 L22: 1.6083 REMARK 3 L33: 1.7618 L12: -0.1878 REMARK 3 L13: 0.6501 L23: -0.5744 REMARK 3 S TENSOR REMARK 3 S11: -0.0695 S12: -0.0313 S13: 0.1152 REMARK 3 S21: -0.0047 S22: 0.0397 S23: -0.0426 REMARK 3 S31: -0.0880 S32: 0.0244 S33: 0.0204 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1228 -15.5286 -34.8657 REMARK 3 T TENSOR REMARK 3 T11: 0.3176 T22: 0.3462 REMARK 3 T33: 0.3122 T12: 0.0394 REMARK 3 T13: 0.0832 T23: -0.0476 REMARK 3 L TENSOR REMARK 3 L11: 3.0668 L22: 6.5161 REMARK 3 L33: 2.4477 L12: 0.1569 REMARK 3 L13: -0.2263 L23: 1.2577 REMARK 3 S TENSOR REMARK 3 S11: -0.0738 S12: 0.1445 S13: 0.0961 REMARK 3 S21: -0.3356 S22: 0.2181 S23: -0.4697 REMARK 3 S31: -0.2745 S32: 0.3138 S33: -0.0459 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 153 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.5133 -20.5015 -25.4941 REMARK 3 T TENSOR REMARK 3 T11: 0.2022 T22: 0.1572 REMARK 3 T33: 0.2869 T12: 0.0452 REMARK 3 T13: -0.0145 T23: 0.0143 REMARK 3 L TENSOR REMARK 3 L11: 1.0518 L22: 4.4430 REMARK 3 L33: 1.7324 L12: 0.8282 REMARK 3 L13: -0.0910 L23: 0.2461 REMARK 3 S TENSOR REMARK 3 S11: 0.1683 S12: -0.0682 S13: -0.5554 REMARK 3 S21: 0.3954 S22: 0.0065 S23: -0.7791 REMARK 3 S31: 0.3047 S32: 0.1877 S33: -0.1671 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 282 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5365 -6.5577 -15.9923 REMARK 3 T TENSOR REMARK 3 T11: 0.1274 T22: 0.1293 REMARK 3 T33: 0.1449 T12: 0.0171 REMARK 3 T13: 0.0168 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 0.7357 L22: 0.7904 REMARK 3 L33: 1.0047 L12: 0.0780 REMARK 3 L13: 0.1983 L23: 0.0713 REMARK 3 S TENSOR REMARK 3 S11: -0.0154 S12: -0.0256 S13: -0.0254 REMARK 3 S21: -0.0646 S22: 0.0347 S23: -0.1146 REMARK 3 S31: 0.0161 S32: 0.1335 S33: -0.0158 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 283 THROUGH 378 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.6777 -10.9058 -30.2248 REMARK 3 T TENSOR REMARK 3 T11: 0.1746 T22: 0.1102 REMARK 3 T33: 0.1403 T12: -0.0162 REMARK 3 T13: -0.0166 T23: 0.0365 REMARK 3 L TENSOR REMARK 3 L11: 1.3481 L22: 1.1923 REMARK 3 L33: 1.8340 L12: -0.1335 REMARK 3 L13: -0.4247 L23: 0.3060 REMARK 3 S TENSOR REMARK 3 S11: -0.0446 S12: 0.0964 S13: -0.1040 REMARK 3 S21: -0.1660 S22: 0.0242 S23: 0.1233 REMARK 3 S31: 0.1653 S32: -0.1326 S33: 0.0249 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 379 THROUGH 427 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.9671 -23.2427 -29.2379 REMARK 3 T TENSOR REMARK 3 T11: 0.2468 T22: 0.1145 REMARK 3 T33: 0.1834 T12: 0.0248 REMARK 3 T13: 0.0072 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 1.0129 L22: 1.5646 REMARK 3 L33: 1.3832 L12: -0.1509 REMARK 3 L13: -0.4021 L23: 0.6340 REMARK 3 S TENSOR REMARK 3 S11: -0.0347 S12: 0.0765 S13: -0.2235 REMARK 3 S21: -0.1521 S22: 0.0668 S23: -0.0989 REMARK 3 S31: 0.2861 S32: 0.0623 S33: -0.0280 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XJN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1300003637. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 173 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52282 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 41.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.30 REMARK 200 R MERGE FOR SHELL (I) : 0.50500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5GWE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, SODIUM IODIDE, PH 7.0, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.52000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.03500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.03500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 93.78000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.03500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.03500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.26000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.03500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.03500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 93.78000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.03500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.03500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 31.26000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 62.52000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 GLY A -17 REMARK 465 LEU A -16 REMARK 465 VAL A -15 REMARK 465 PRO A -14 REMARK 465 ARG A -13 REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 GLY A -10 REMARK 465 MET A -9 REMARK 465 LYS A -8 REMARK 465 GLU A -7 REMARK 465 THR A -6 REMARK 465 ALA A -5 REMARK 465 ALA A -4 REMARK 465 ALA A -3 REMARK 465 LYS A -2 REMARK 465 PHE A -1 REMARK 465 GLU A 0 REMARK 465 ARG A 1 REMARK 465 GLN A 2 REMARK 465 HIS A 3 REMARK 465 MET A 4 REMARK 465 ASP A 5 REMARK 465 SER A 6 REMARK 465 PRO A 7 REMARK 465 ASP A 8 REMARK 465 LEU A 9 REMARK 465 GLY A 10 REMARK 465 THR A 11 REMARK 465 ASP A 12 REMARK 465 ASP A 13 REMARK 465 ASP A 14 REMARK 465 ASP A 15 REMARK 465 LYS A 16 REMARK 465 ALA A 17 REMARK 465 MET A 18 REMARK 465 ALA A 19 REMARK 465 ASP A 20 REMARK 465 ILE A 21 REMARK 465 GLY A 22 REMARK 465 SER A 23 REMARK 465 THR A 24 REMARK 465 ALA A 428 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 754 O HOH A 760 1.99 REMARK 500 O HOH A 730 O HOH A 994 1.99 REMARK 500 O HOH A 917 O HOH A 918 2.03 REMARK 500 O HOH A 1023 O HOH A 1139 2.04 REMARK 500 O HOH A 674 O HOH A 1064 2.05 REMARK 500 O HOH A 1058 O HOH A 1124 2.06 REMARK 500 O HOH A 1054 O HOH A 1089 2.07 REMARK 500 O HOH A 830 O HOH A 998 2.08 REMARK 500 O HOH A 694 O HOH A 967 2.08 REMARK 500 O HOH A 947 O HOH A 1064 2.08 REMARK 500 O HOH A 976 O HOH A 999 2.09 REMARK 500 O HOH A 871 O HOH A 1062 2.09 REMARK 500 O HOH A 667 O HOH A 1042 2.10 REMARK 500 O HOH A 1014 O HOH A 1074 2.11 REMARK 500 O HOH A 956 O HOH A 993 2.15 REMARK 500 O HOH A 764 O HOH A 1021 2.19 REMARK 500 O HOH A 956 O HOH A 1073 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG A 130 OE1 GLN A 245 8554 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 36 76.87 -159.50 REMARK 500 GLU A 48 71.46 -154.71 REMARK 500 TYR A 105 -59.91 -138.64 REMARK 500 LEU A 108 -42.60 -144.87 REMARK 500 LEU A 164 -63.27 -150.30 REMARK 500 HIS A 267 -29.50 -141.04 REMARK 500 SER A 309 54.13 -151.35 REMARK 500 PHE A 371 137.36 -170.24 REMARK 500 ALA A 404 141.43 -174.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1149 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A1150 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH A1151 DISTANCE = 7.48 ANGSTROMS REMARK 525 HOH A1152 DISTANCE = 8.23 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 502 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 376 SG REMARK 620 2 HEM A 502 NA 104.8 REMARK 620 3 HEM A 502 NB 91.2 88.5 REMARK 620 4 HEM A 502 NC 92.4 162.6 89.5 REMARK 620 5 HEM A 502 ND 105.6 88.2 163.2 88.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 88L A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5GWE RELATED DB: PDB DBREF 5XJN A 23 428 UNP Q8NSW2 Q8NSW2_CORGL 25 430 SEQADV 5XJN MET A -26 UNP Q8NSW2 INITIATING METHIONINE SEQADV 5XJN HIS A -25 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN HIS A -24 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN HIS A -23 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN HIS A -22 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN HIS A -21 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN HIS A -20 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN SER A -19 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN SER A -18 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN GLY A -17 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN LEU A -16 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN VAL A -15 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN PRO A -14 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ARG A -13 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN GLY A -12 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN SER A -11 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN GLY A -10 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN MET A -9 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN LYS A -8 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN GLU A -7 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN THR A -6 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ALA A -5 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ALA A -4 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ALA A -3 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN LYS A -2 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN PHE A -1 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN GLU A 0 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ARG A 1 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN GLN A 2 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN HIS A 3 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN MET A 4 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ASP A 5 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN SER A 6 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN PRO A 7 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ASP A 8 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN LEU A 9 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN GLY A 10 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN THR A 11 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ASP A 12 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ASP A 13 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ASP A 14 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ASP A 15 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN LYS A 16 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ALA A 17 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN MET A 18 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ALA A 19 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ASP A 20 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN ILE A 21 UNP Q8NSW2 EXPRESSION TAG SEQADV 5XJN GLY A 22 UNP Q8NSW2 EXPRESSION TAG SEQRES 1 A 455 MET HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO SEQRES 2 A 455 ARG GLY SER GLY MET LYS GLU THR ALA ALA ALA LYS PHE SEQRES 3 A 455 GLU ARG GLN HIS MET ASP SER PRO ASP LEU GLY THR ASP SEQRES 4 A 455 ASP ASP ASP LYS ALA MET ALA ASP ILE GLY SER THR SER SEQRES 5 A 455 HIS HIS GLY TYR GLN PRO PHE ASP MET HIS ASN PRO PHE SEQRES 6 A 455 PRO ALA TYR LYS GLU LEU ARG GLN GLU GLU PRO VAL MET SEQRES 7 A 455 PHE ASP GLU ARG ILE GLY TYR TRP VAL VAL THR LYS TYR SEQRES 8 A 455 ASP ASP ILE LYS THR THR PHE ASP ASP TRP GLU THR PHE SEQRES 9 A 455 SER SER GLU ASN ALA GLN ALA PRO VAL ARG LYS ARG GLY SEQRES 10 A 455 PRO GLN ALA THR GLN ILE MET THR ASP GLY GLY PHE THR SEQRES 11 A 455 ALA TYR SER GLY LEU SER ALA ARG ILE PRO PRO GLU HIS SEQRES 12 A 455 THR ARG ILE ARG ALA ILE ALA GLN LYS ALA PHE THR PRO SEQRES 13 A 455 ARG ARG TYR LYS ALA LEU GLU PRO ASP ILE ARG ALA MET SEQRES 14 A 455 VAL ILE ASP ARG VAL GLU LYS MET LEU ALA ASN ASP GLN SEQRES 15 A 455 HIS VAL GLY ASP MET VAL SER ASP LEU ALA TYR ASP ILE SEQRES 16 A 455 PRO THR ILE THR ILE LEU THR LEU ILE GLY ALA ASP ILE SEQRES 17 A 455 SER MET VAL ASP THR TYR LYS ARG TRP SER ASP SER ARG SEQRES 18 A 455 ALA ALA MET THR TRP GLY ASP LEU SER ASP GLU GLU GLN SEQRES 19 A 455 ILE PRO HIS ALA HIS ASN LEU VAL GLU TYR TRP GLN GLU SEQRES 20 A 455 CYS GLN ARG MET VAL ALA ASP ALA HIS ALA HIS GLY GLY SEQRES 21 A 455 ASP ASN LEU THR ALA ASP LEU VAL ARG ALA GLN GLN GLU SEQRES 22 A 455 GLY GLN GLU ILE THR ASP HIS GLU ILE ALA SER LEU LEU SEQRES 23 A 455 TYR SER LEU LEU PHE ALA GLY HIS GLU THR THR THR THR SEQRES 24 A 455 LEU ILE SER ASN CYS PHE ARG VAL LEU LEU ASP HIS PRO SEQRES 25 A 455 GLU GLN TRP GLN ALA ILE LEU GLU ASN PRO LYS LEU ILE SEQRES 26 A 455 PRO ALA ALA VAL ASP GLU VAL LEU ARG TYR SER GLY SER SEQRES 27 A 455 ILE VAL GLY TRP ARG ARG LYS ALA LEU LYS ASP THR GLU SEQRES 28 A 455 ILE GLY GLY VAL ALA ILE LYS GLU GLY ASP GLY VAL LEU SEQRES 29 A 455 LEU LEU MET GLY SER ALA ASN ARG ASP GLU ALA ARG PHE SEQRES 30 A 455 GLU ASN GLY GLU GLU PHE ASP ILE SER ARG ALA ASN ALA SEQRES 31 A 455 ARG GLU HIS LEU SER PHE GLY PHE GLY ILE HIS TYR CYS SEQRES 32 A 455 LEU GLY ASN MET LEU ALA LYS LEU GLN ALA LYS ILE CYS SEQRES 33 A 455 LEU GLU GLU VAL THR ARG LEU VAL PRO SER LEU HIS LEU SEQRES 34 A 455 VAL ALA ASP LYS ALA ILE GLY PHE ARG GLU ASN LEU SER SEQRES 35 A 455 PHE ARG VAL PRO THR SER VAL PRO VAL THR TRP ASN ALA HET 88L A 501 22 HET HEM A 502 73 HETNAM 88L (4-ETHYLPHENYL) DIHYDROGEN PHOSPHATE HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 2 88L C8 H11 O4 P FORMUL 3 HEM C34 H32 FE N4 O4 FORMUL 4 HOH *552(H2 O) HELIX 1 AA1 SER A 25 TYR A 29 5 5 HELIX 2 AA2 PRO A 37 GLU A 48 1 12 HELIX 3 AA3 LYS A 63 ASP A 73 1 11 HELIX 4 AA4 GLY A 90 GLY A 100 1 11 HELIX 5 AA5 PRO A 114 LYS A 125 1 12 HELIX 6 AA6 THR A 128 ALA A 134 1 7 HELIX 7 AA7 LEU A 135 ALA A 152 1 18 HELIX 8 AA8 ASP A 167 GLY A 178 1 12 HELIX 9 AA9 ASP A 180 SER A 182 5 3 HELIX 10 AB1 MET A 183 GLY A 200 1 18 HELIX 11 AB2 SER A 203 GLY A 232 1 30 HELIX 12 AB3 ASN A 235 GLU A 246 1 12 HELIX 13 AB4 THR A 251 GLY A 266 1 16 HELIX 14 AB5 HIS A 267 HIS A 284 1 18 HELIX 15 AB6 HIS A 284 ASN A 294 1 11 HELIX 16 AB7 LEU A 297 SER A 309 1 13 HELIX 17 AB8 LEU A 339 ASN A 344 1 6 HELIX 18 AB9 ASN A 362 HIS A 366 5 5 HELIX 19 AC1 GLY A 378 VAL A 397 1 20 HELIX 20 AC2 ALA A 404 ILE A 408 5 5 SHEET 1 AA1 5 VAL A 50 ASP A 53 0 SHEET 2 AA1 5 TYR A 58 VAL A 61 -1 O VAL A 60 N MET A 51 SHEET 3 AA1 5 GLY A 335 LEU A 338 1 O LEU A 337 N TRP A 59 SHEET 4 AA1 5 TRP A 315 ALA A 319 -1 N TRP A 315 O LEU A 338 SHEET 5 AA1 5 PHE A 77 SER A 78 -1 N SER A 78 O LYS A 318 SHEET 1 AA2 3 VAL A 157 ASP A 159 0 SHEET 2 AA2 3 PRO A 423 THR A 425 -1 O VAL A 424 N GLY A 158 SHEET 3 AA2 3 HIS A 401 LEU A 402 -1 N HIS A 401 O THR A 425 SHEET 1 AA3 2 THR A 323 ILE A 325 0 SHEET 2 AA3 2 VAL A 328 ILE A 330 -1 O ILE A 330 N THR A 323 LINK SG CYS A 376 FE HEM A 502 1555 1555 2.45 CISPEP 1 PRO A 113 PRO A 114 0 6.14 SITE 1 AC1 12 GLN A 83 SER A 106 GLY A 107 LEU A 108 SITE 2 AC1 12 SER A 109 ARG A 194 SER A 261 PHE A 264 SITE 3 AC1 12 ALA A 265 ILE A 312 TRP A 315 HEM A 502 SITE 1 AC2 27 PHE A 71 LEU A 108 SER A 109 HIS A 116 SITE 2 AC2 27 ARG A 120 PHE A 127 SER A 261 ALA A 265 SITE 3 AC2 27 GLY A 266 THR A 269 THR A 270 LEU A 273 SITE 4 AC2 27 SER A 311 TRP A 315 ARG A 317 MET A 340 SITE 5 AC2 27 SER A 368 PHE A 369 GLY A 370 PHE A 371 SITE 6 AC2 27 HIS A 374 CYS A 376 GLY A 378 ALA A 382 SITE 7 AC2 27 88L A 501 HOH A 678 HOH A 743 CRYST1 86.070 86.070 125.040 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011618 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011618 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007997 0.00000