HEADER HYDROLASE 09-MAY-17 5XKT TITLE KLEBSIELLA PNEUMONIAE UREG IN COMPLEX WITH GMPPNP AND NICKEL COMPND MOL_ID: 1; COMPND 2 MOLECULE: UREASE ACCESSORY PROTEIN UREG; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 5-204; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE SUBSP. RHINOSCLEROMATIS SOURCE 3 SB3432; SOURCE 4 ORGANISM_TAXID: 861365; SOURCE 5 GENE: UREG, KPR_4504; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SIMIBI CLASS GTPASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.H.FONG,M.H.YUEN,Y.S.NIM,P.H.LAU,K.B.WONG REVDAT 4 22-NOV-23 5XKT 1 LINK REVDAT 3 03-JAN-18 5XKT 1 JRNL REVDAT 2 27-DEC-17 5XKT 1 JRNL REVDAT 1 13-DEC-17 5XKT 0 JRNL AUTH M.H.YUEN,Y.H.FONG,Y.S.NIM,P.H.LAU,K.B.WONG JRNL TITL STRUCTURAL INSIGHTS INTO HOW GTP-DEPENDENT CONFORMATIONAL JRNL TITL 2 CHANGES IN A METALLOCHAPERONE UREG FACILITATE UREASE JRNL TITL 3 MATURATION. JRNL REF PROC. NATL. ACAD. SCI. V. 114 10890 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 29203664 JRNL DOI 10.1073/PNAS.1712658114 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 47816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.180 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.4356 - 4.3236 1.00 3383 147 0.1526 0.1831 REMARK 3 2 4.3236 - 3.4380 0.99 3312 145 0.1340 0.1494 REMARK 3 3 3.4380 - 3.0052 1.00 3272 142 0.1655 0.1926 REMARK 3 4 3.0052 - 2.7312 1.00 3281 142 0.1717 0.1978 REMARK 3 5 2.7312 - 2.5359 1.00 3272 143 0.1604 0.2010 REMARK 3 6 2.5359 - 2.3867 1.00 3268 143 0.1463 0.1919 REMARK 3 7 2.3867 - 2.2674 1.00 3260 142 0.1513 0.1901 REMARK 3 8 2.2674 - 2.1688 1.00 3269 143 0.1489 0.1973 REMARK 3 9 2.1688 - 2.0854 1.00 3248 141 0.1549 0.2201 REMARK 3 10 2.0854 - 2.0135 1.00 3259 143 0.1554 0.2175 REMARK 3 11 2.0135 - 1.9506 1.00 3268 143 0.1621 0.1859 REMARK 3 12 1.9506 - 1.8949 1.00 3220 141 0.1703 0.2143 REMARK 3 13 1.8949 - 1.8451 1.00 3285 143 0.1837 0.2449 REMARK 3 14 1.8451 - 1.8001 1.00 3221 140 0.2118 0.2392 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3096 REMARK 3 ANGLE : 1.315 4212 REMARK 3 CHIRALITY : 0.087 488 REMARK 3 PLANARITY : 0.008 538 REMARK 3 DIHEDRAL : 10.140 1850 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -11.6602 8.2038 -13.5713 REMARK 3 T TENSOR REMARK 3 T11: 0.1041 T22: 0.0838 REMARK 3 T33: 0.1047 T12: 0.0047 REMARK 3 T13: -0.0114 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.8542 L22: 0.3759 REMARK 3 L33: 0.9581 L12: 0.1014 REMARK 3 L13: -0.1623 L23: -0.0025 REMARK 3 S TENSOR REMARK 3 S11: -0.0040 S12: -0.0932 S13: 0.0020 REMARK 3 S21: -0.0064 S22: -0.0206 S23: -0.0060 REMARK 3 S31: -0.0318 S32: 0.1009 S33: 0.0237 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XKT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1300003572. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47816 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 19.433 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.30300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4HI0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 7.5, 1.8 M (NH4)2SO4, REMARK 280 3% DIOXANE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 27.01112 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.65900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.15081 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 27.01112 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.65900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 63.15081 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 5 REMARK 465 LYS B 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 602 O HOH B 777 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 78 -72.41 -136.15 REMARK 500 ARG B 78 -76.32 -137.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 623 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH A 624 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH B 859 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B 860 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH B 861 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH B 862 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH B 863 DISTANCE = 6.48 ANGSTROMS REMARK 525 HOH B 864 DISTANCE = 6.63 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 302 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 21 OG1 REMARK 620 2 ASP A 49 OD2 84.3 REMARK 620 3 GLU A 104 OE2 85.4 87.7 REMARK 620 4 GNP A 301 O1G 176.3 94.0 91.3 REMARK 620 5 GNP A 301 O1B 92.8 172.7 98.8 89.2 REMARK 620 6 HOH A 447 O 89.8 89.5 174.6 93.5 83.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 303 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 72 SG REMARK 620 2 HIS A 74 NE2 95.3 REMARK 620 3 CYS B 72 SG 169.6 83.9 REMARK 620 4 HIS B 74 NE2 85.9 175.7 95.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 501 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 21 OG1 REMARK 620 2 ASP B 49 OD2 87.9 REMARK 620 3 GLU B 104 OE2 86.1 88.9 REMARK 620 4 GNP B 500 O2G 174.1 90.5 88.2 REMARK 620 5 GNP B 500 O2B 92.6 175.5 95.6 89.4 REMARK 620 6 HOH B 612 O 91.5 88.1 176.2 94.1 87.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 501 DBREF 5XKT A 5 204 UNP R4YE37 R4YE37_KLEPR 5 204 DBREF 5XKT B 5 204 UNP R4YE37 R4YE37_KLEPR 5 204 SEQRES 1 A 200 LYS HIS PRO LEU ARG VAL GLY VAL GLY GLY PRO VAL GLY SEQRES 2 A 200 SER GLY LYS THR ALA LEU LEU GLU ALA LEU CYS LYS ALA SEQRES 3 A 200 MET ARG ASP THR TRP GLN LEU ALA VAL VAL THR ASN ASP SEQRES 4 A 200 ILE TYR THR LYS GLU ASP GLN ARG ILE LEU THR GLU ALA SEQRES 5 A 200 GLY THR LEU ALA PRO GLU ARG ILE VAL GLY VAL GLU THR SEQRES 6 A 200 GLY GLY CYS PRO HIS THR ALA ILE ARG GLU ASP ALA SER SEQRES 7 A 200 MET ASN LEU ALA ALA VAL GLU ALA LEU SER GLU LYS PHE SEQRES 8 A 200 GLY ASN LEU ASP LEU ILE PHE VAL GLU SER GLY GLY ASP SEQRES 9 A 200 ASN LEU SER ALA THR PHE SER PRO GLU LEU ALA ASP LEU SEQRES 10 A 200 THR ILE TYR VAL ILE ASP VAL ALA GLU GLY GLU LYS ILE SEQRES 11 A 200 PRO ARG LYS GLY GLY PRO GLY ILE THR ARG SER ASP PHE SEQRES 12 A 200 LEU VAL ILE ASN LYS THR ASP LEU ALA PRO TYR VAL GLY SEQRES 13 A 200 ALA SER LEU LYS VAL MET ALA SER ASP THR GLN ARG MET SEQRES 14 A 200 ARG GLY ASP ARG PRO TRP THR PHE THR ASN LEU LYS GLN SEQRES 15 A 200 GLY ASP GLY LEU SER THR ILE ILE ALA PHE LEU GLU ASP SEQRES 16 A 200 LYS GLY MET LEU GLY SEQRES 1 B 200 LYS HIS PRO LEU ARG VAL GLY VAL GLY GLY PRO VAL GLY SEQRES 2 B 200 SER GLY LYS THR ALA LEU LEU GLU ALA LEU CYS LYS ALA SEQRES 3 B 200 MET ARG ASP THR TRP GLN LEU ALA VAL VAL THR ASN ASP SEQRES 4 B 200 ILE TYR THR LYS GLU ASP GLN ARG ILE LEU THR GLU ALA SEQRES 5 B 200 GLY THR LEU ALA PRO GLU ARG ILE VAL GLY VAL GLU THR SEQRES 6 B 200 GLY GLY CYS PRO HIS THR ALA ILE ARG GLU ASP ALA SER SEQRES 7 B 200 MET ASN LEU ALA ALA VAL GLU ALA LEU SER GLU LYS PHE SEQRES 8 B 200 GLY ASN LEU ASP LEU ILE PHE VAL GLU SER GLY GLY ASP SEQRES 9 B 200 ASN LEU SER ALA THR PHE SER PRO GLU LEU ALA ASP LEU SEQRES 10 B 200 THR ILE TYR VAL ILE ASP VAL ALA GLU GLY GLU LYS ILE SEQRES 11 B 200 PRO ARG LYS GLY GLY PRO GLY ILE THR ARG SER ASP PHE SEQRES 12 B 200 LEU VAL ILE ASN LYS THR ASP LEU ALA PRO TYR VAL GLY SEQRES 13 B 200 ALA SER LEU LYS VAL MET ALA SER ASP THR GLN ARG MET SEQRES 14 B 200 ARG GLY ASP ARG PRO TRP THR PHE THR ASN LEU LYS GLN SEQRES 15 B 200 GLY ASP GLY LEU SER THR ILE ILE ALA PHE LEU GLU ASP SEQRES 16 B 200 LYS GLY MET LEU GLY HET GNP A 301 32 HET NI A 302 1 HET NI A 303 1 HET GNP B 500 32 HET NI B 501 1 HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM NI NICKEL (II) ION FORMUL 3 GNP 2(C10 H17 N6 O13 P3) FORMUL 4 NI 3(NI 2+) FORMUL 8 HOH *488(H2 O) HELIX 1 AA1 GLY A 19 ARG A 32 1 14 HELIX 2 AA2 LYS A 47 ALA A 56 1 10 HELIX 3 AA3 ALA A 60 GLU A 62 5 3 HELIX 4 AA4 CYS A 72 ARG A 78 1 7 HELIX 5 AA5 ALA A 81 GLY A 96 1 16 HELIX 6 AA6 ALA A 129 GLY A 131 5 3 HELIX 7 AA7 LYS A 133 GLY A 138 1 6 HELIX 8 AA8 GLY A 139 SER A 145 1 7 HELIX 9 AA9 LYS A 152 ASP A 154 5 3 HELIX 10 AB1 LEU A 155 GLY A 160 1 6 HELIX 11 AB2 SER A 162 GLY A 175 1 14 HELIX 12 AB3 GLY A 189 GLY A 201 1 13 HELIX 13 AB4 GLY B 19 ARG B 32 1 14 HELIX 14 AB5 LYS B 47 ALA B 56 1 10 HELIX 15 AB6 ALA B 60 GLU B 62 5 3 HELIX 16 AB7 CYS B 72 ARG B 78 1 7 HELIX 17 AB8 ALA B 81 GLY B 96 1 16 HELIX 18 AB9 ALA B 129 GLY B 131 5 3 HELIX 19 AC1 LYS B 133 GLY B 138 1 6 HELIX 20 AC2 GLY B 139 SER B 145 1 7 HELIX 21 AC3 LYS B 152 ASP B 154 5 3 HELIX 22 AC4 LEU B 155 GLY B 160 1 6 HELIX 23 AC5 SER B 162 GLY B 175 1 14 HELIX 24 AC6 GLY B 189 GLY B 201 1 13 SHEET 1 AA1 7 ILE A 64 GLU A 68 0 SHEET 2 AA1 7 LEU A 37 ASP A 43 1 N THR A 41 O VAL A 65 SHEET 3 AA1 7 LEU A 100 GLU A 104 1 O PHE A 102 N VAL A 40 SHEET 4 AA1 7 LEU A 8 GLY A 13 1 N VAL A 12 O VAL A 103 SHEET 5 AA1 7 LEU A 121 ASP A 127 1 O ILE A 123 N GLY A 11 SHEET 6 AA1 7 PHE A 147 ASN A 151 1 O ASN A 151 N ILE A 126 SHEET 7 AA1 7 TRP A 179 PHE A 181 1 O THR A 180 N ILE A 150 SHEET 1 AA2 7 ILE B 64 GLU B 68 0 SHEET 2 AA2 7 LEU B 37 ASP B 43 1 N THR B 41 O VAL B 65 SHEET 3 AA2 7 LEU B 100 GLU B 104 1 O PHE B 102 N VAL B 40 SHEET 4 AA2 7 LEU B 8 GLY B 13 1 N VAL B 12 O VAL B 103 SHEET 5 AA2 7 LEU B 121 ASP B 127 1 O ILE B 123 N GLY B 11 SHEET 6 AA2 7 PHE B 147 ASN B 151 1 O ASN B 151 N ILE B 126 SHEET 7 AA2 7 TRP B 179 PHE B 181 1 O THR B 180 N ILE B 150 LINK OG1 THR A 21 NI NI A 302 1555 1555 2.08 LINK OD2 ASP A 49 NI NI A 302 1555 1555 2.12 LINK SG CYS A 72 NI NI A 303 1555 1555 2.29 LINK NE2 HIS A 74 NI NI A 303 1555 1555 2.00 LINK OE2 GLU A 104 NI NI A 302 1555 1555 2.09 LINK O1G GNP A 301 NI NI A 302 1555 1555 2.04 LINK O1B GNP A 301 NI NI A 302 1555 1555 2.07 LINK NI NI A 302 O HOH A 447 1555 1555 2.15 LINK NI NI A 303 SG CYS B 72 1555 1555 2.30 LINK NI NI A 303 NE2 HIS B 74 1555 1555 1.98 LINK OG1 THR B 21 NI NI B 501 1555 1555 2.12 LINK OD2 ASP B 49 NI NI B 501 1555 1555 2.13 LINK OE2 GLU B 104 NI NI B 501 1555 1555 2.13 LINK O2G GNP B 500 NI NI B 501 1555 1555 2.11 LINK O2B GNP B 500 NI NI B 501 1555 1555 2.09 LINK NI NI B 501 O HOH B 612 1555 1555 2.16 SITE 1 AC1 28 VAL A 16 GLY A 17 SER A 18 GLY A 19 SITE 2 AC1 28 LYS A 20 THR A 21 ALA A 22 ASP A 49 SITE 3 AC1 28 GLU A 104 ASN A 151 LYS A 152 ASP A 154 SITE 4 AC1 28 ASN A 183 LEU A 184 LYS A 185 NI A 302 SITE 5 AC1 28 HOH A 422 HOH A 447 HOH A 503 HOH A 510 SITE 6 AC1 28 ALA B 129 GLU B 130 GLY B 131 LYS B 133 SITE 7 AC1 28 LYS B 137 TYR B 158 VAL B 159 HOH B 660 SITE 1 AC2 5 THR A 21 ASP A 49 GLU A 104 GNP A 301 SITE 2 AC2 5 HOH A 447 SITE 1 AC3 4 CYS A 72 HIS A 74 CYS B 72 HIS B 74 SITE 1 AC4 29 ALA A 129 GLU A 130 GLY A 131 LYS A 133 SITE 2 AC4 29 LYS A 137 TYR A 158 VAL A 159 HOH A 471 SITE 3 AC4 29 VAL B 16 GLY B 17 SER B 18 GLY B 19 SITE 4 AC4 29 LYS B 20 THR B 21 ALA B 22 ASP B 49 SITE 5 AC4 29 GLU B 104 ASN B 151 LYS B 152 ASP B 154 SITE 6 AC4 29 ASN B 183 LEU B 184 LYS B 185 NI B 501 SITE 7 AC4 29 HOH B 612 HOH B 634 HOH B 703 HOH B 708 SITE 8 AC4 29 HOH B 720 SITE 1 AC5 5 THR B 21 ASP B 49 GLU B 104 GNP B 500 SITE 2 AC5 5 HOH B 612 CRYST1 83.553 49.318 129.708 90.00 103.16 90.00 I 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011968 0.000000 0.002799 0.00000 SCALE2 0.000000 0.020277 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007918 0.00000