HEADER LYASE 10-MAY-17 5XKY TITLE CRYSTAL STRUCTURE OF DDDY SE DERIVATIVE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DMSP LYASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BEREZINIAE NIPH 3; SOURCE 3 ORGANISM_TAXID: 1217651; SOURCE 4 GENE: F963_02809; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS DIMETHYLSULFONIOPROPIONATE (DMSP) LYASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR C.Y.LI,Y.Z.ZHANG REVDAT 2 24-JAN-18 5XKY 1 JRNL REVDAT 1 01-NOV-17 5XKY 0 JRNL AUTH C.Y.LI,D.ZHANG,X.L.CHEN,P.WANG,W.L.SHI,P.Y.LI,X.Y.ZHANG, JRNL AUTH 2 Q.L.QIN,J.D.TODD,Y.Z.ZHANG JRNL TITL MECHANISTIC INSIGHTS INTO DIMETHYLSULFONIOPROPIONATE LYASE JRNL TITL 2 DDDY, A NEW MEMBER OF THE CUPIN SUPERFAMILY. JRNL REF J. MOL. BIOL. V. 429 3850 2017 JRNL REFN ESSN 1089-8638 JRNL PMID 29106934 JRNL DOI 10.1016/J.JMB.2017.10.022 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 17777 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 869 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.7510 - 4.1844 0.99 2960 161 0.1337 0.1777 REMARK 3 2 4.1844 - 3.3215 0.99 2852 137 0.1318 0.1875 REMARK 3 3 3.3215 - 2.9017 1.00 2810 147 0.1566 0.2335 REMARK 3 4 2.9017 - 2.6365 1.00 2799 154 0.1542 0.2050 REMARK 3 5 2.6365 - 2.4475 1.00 2790 149 0.1494 0.2142 REMARK 3 6 2.4475 - 2.3032 0.95 2697 121 0.1490 0.2304 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3160 REMARK 3 ANGLE : 0.884 4293 REMARK 3 CHIRALITY : 0.052 451 REMARK 3 PLANARITY : 0.006 553 REMARK 3 DIHEDRAL : 15.059 1888 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XKY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1300003437. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17823 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 48.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 12.50 REMARK 200 R MERGE FOR SHELL (I) : 0.20000 REMARK 200 R SYM FOR SHELL (I) : 0.20000 REMARK 200 FOR SHELL : 27.10 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 0.1 M TRIS-HCL REMARK 280 (PH 8.5) AND 25% (WT/VOL) PEG 3350, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.61050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.17050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.18750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.17050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.61050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.18750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 HIS A 2 REMARK 465 LYS A 3 REMARK 465 ARG A 4 REMARK 465 PHE A 5 REMARK 465 LEU A 6 REMARK 465 GLY A 7 REMARK 465 THR A 8 REMARK 465 ILE A 9 REMARK 465 PHE A 10 REMARK 465 GLY A 11 REMARK 465 ALA A 12 REMARK 465 THR A 13 REMARK 465 LEU A 14 REMARK 465 THR A 15 REMARK 465 CYS A 16 REMARK 465 PHE A 17 REMARK 465 GLN A 18 REMARK 465 ALA A 19 REMARK 465 GLN A 20 REMARK 465 ALA A 21 REMARK 465 HIS A 402 REMARK 465 HIS A 403 REMARK 465 HIS A 404 REMARK 465 HIS A 405 REMARK 465 HIS A 406 REMARK 465 HIS A 407 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 401 C - N - CA ANGL. DEV. = 11.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 214 49.25 -91.64 REMARK 500 SER A 300 -167.49 -116.78 REMARK 500 GLU A 325 -69.45 -109.25 REMARK 500 ASN A 327 71.66 -102.67 REMARK 500 THR A 349 -26.36 -143.90 REMARK 500 ASN A 367 -167.37 59.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 500 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 265 NE2 REMARK 620 2 GLU A 269 OE1 97.3 REMARK 620 3 HIS A 338 NE2 92.9 104.6 REMARK 620 4 HOH A 608 O 154.0 88.9 110.0 REMARK 620 5 HOH A 867 O 98.7 107.7 143.8 55.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5XKX RELATED DB: PDB REMARK 900 RELATED ID: 5XKZ RELATED DB: PDB DBREF 5XKY A 1 401 UNP N8X9V6 N8X9V6_ACIBZ 1 401 SEQADV 5XKY HIS A 402 UNP N8X9V6 EXPRESSION TAG SEQADV 5XKY HIS A 403 UNP N8X9V6 EXPRESSION TAG SEQADV 5XKY HIS A 404 UNP N8X9V6 EXPRESSION TAG SEQADV 5XKY HIS A 405 UNP N8X9V6 EXPRESSION TAG SEQADV 5XKY HIS A 406 UNP N8X9V6 EXPRESSION TAG SEQADV 5XKY HIS A 407 UNP N8X9V6 EXPRESSION TAG SEQRES 1 A 407 MSE HIS LYS ARG PHE LEU GLY THR ILE PHE GLY ALA THR SEQRES 2 A 407 LEU THR CYS PHE GLN ALA GLN ALA ALA GLN PHE GLN CYS SEQRES 3 A 407 GLN ASP ASP VAL LYS PRO THR SER TYR THR THR GLU GLU SEQRES 4 A 407 GLN LYS LEU VAL ASP GLN PHE TRP ASN GLU SER LEU ILE SEQRES 5 A 407 TYR LEU ASP GLN TYR LEU LYS ALA LEU GLU THR PRO THR SEQRES 6 A 407 GLY GLN CYS LYS ASP SER ALA GLN ALA THR ILE GLN THR SEQRES 7 A 407 TYR ASN SER GLU THR GLY LYS MSE GLN THR GLN CYS ILE SEQRES 8 A 407 MSE LYS TYR ARG ASP VAL GLU LEU VAL ALA LYS HIS LEU SEQRES 9 A 407 LYS ALA VAL LEU ALA GLU PRO ASP LYS ALA LYS ALA CYS SEQRES 10 A 407 PHE ASP PRO GLN LYS ASN TYR LYS ALA PHE PRO LEU TYR SEQRES 11 A 407 THR PRO SER ALA HIS VAL GLN ASN LEU SER ALA THR SER SEQRES 12 A 407 LYS TRP ILE ASN ARG PRO LEU LEU THR ASP TYR TYR LYS SEQRES 13 A 407 LYS ILE GLY GLY GLU ILE GLY ALA ALA GLY LEU GLU LEU SEQRES 14 A 407 ASN GLU ASN PHE LEU GLU ILE THR SER ARG THR ASP THR SEQRES 15 A 407 THR LEU HIS TRP THR LYS ASP VAL SER ILE LYS GLY LEU SEQRES 16 A 407 PRO THR LEU TRP SER SER VAL GLY TRP ILE PRO PHE TYR SEQRES 17 A 407 ALA GLU ASN PRO ASN ALA GLY SER ASP ARG PHE ARG GLY SEQRES 18 A 407 GLY TYR LEU TYR ALA GLU VAL MSE GLY PRO TRP GLY ASN SEQRES 19 A 407 LEU ARG ILE LYS GLU ILE ASP GLY GLU LYS VAL GLY ALA SEQRES 20 A 407 GLU ILE GLY MSE THR ALA GLN LEU PHE ASN THR SER TYR SEQRES 21 A 407 PRO TYR HIS TYR HIS HIS PRO GLN GLU ILE TYR MSE THR SEQRES 22 A 407 LEU THR LYS PRO GLN CYS ILE ASP GLN ASN LYS HIS MSE SEQRES 23 A 407 VAL MSE HIS TRP ASP ASN ASN GLN PHE LYS GLN LYS ARG SEQRES 24 A 407 SER ASP ASN GLY TRP THR VAL ASN ILE ASP GLY SER LYS SEQRES 25 A 407 GLY LYS TRP LYS LYS TRP PHE SER ASN GLN ASP PRO GLU SEQRES 26 A 407 GLN ASN TRP LEU THR TYR PHE GLU ARG ASN ALA ILE HIS SEQRES 27 A 407 ALA PHE HIS THR LEU GLU GLY CYS ASN GLN THR ILE LYS SEQRES 28 A 407 ASN SER GLY LEU VAL THR VAL TRP ALA ARG THR THR ALA SEQRES 29 A 407 GLN ASP ASN ASN GLN THR THR GLN LEU CYS ARG PRO MSE SEQRES 30 A 407 THR GLY ALA LYS ASP ILE LYS THR MSE LYS PRO GLU ASP SEQRES 31 A 407 LYS ALA ILE CYS ASP LEU ASP ASP TRP LYS PRO HIS HIS SEQRES 32 A 407 HIS HIS HIS HIS MODRES 5XKY MSE A 86 MET MODIFIED RESIDUE MODRES 5XKY MSE A 92 MET MODIFIED RESIDUE MODRES 5XKY MSE A 229 MET MODIFIED RESIDUE MODRES 5XKY MSE A 251 MET MODIFIED RESIDUE MODRES 5XKY MSE A 272 MET MODIFIED RESIDUE MODRES 5XKY MSE A 286 MET MODIFIED RESIDUE MODRES 5XKY MSE A 288 MET MODIFIED RESIDUE MODRES 5XKY MSE A 377 MET MODIFIED RESIDUE MODRES 5XKY MSE A 386 MET MODIFIED RESIDUE HET MSE A 86 8 HET MSE A 92 8 HET MSE A 229 8 HET MSE A 251 8 HET MSE A 272 8 HET MSE A 286 8 HET MSE A 288 8 HET MSE A 377 8 HET MSE A 386 8 HET ZN A 500 1 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 ZN ZN 2+ FORMUL 3 HOH *307(H2 O) HELIX 1 AA1 THR A 36 THR A 63 1 28 HELIX 2 AA2 TYR A 94 GLU A 110 1 17 HELIX 3 AA3 GLU A 110 ALA A 116 1 7 HELIX 4 AA4 SER A 133 ASN A 138 1 6 HELIX 5 AA5 SER A 140 ASN A 147 1 8 HELIX 6 AA6 LEU A 150 GLY A 159 1 10 HELIX 7 AA7 GLY A 159 ASN A 172 1 14 HELIX 8 AA8 ASN A 172 ARG A 179 1 8 HELIX 9 AA9 LEU A 195 VAL A 202 1 8 HELIX 10 AB1 SER A 216 GLY A 222 1 7 HELIX 11 AB2 TRP A 315 PHE A 319 5 5 HELIX 12 AB3 GLU A 344 THR A 349 5 6 HELIX 13 AB4 GLY A 379 MSE A 386 5 8 SHEET 1 AA1 3 PHE A 24 CYS A 26 0 SHEET 2 AA1 3 ILE A 237 ILE A 240 -1 O GLU A 239 N GLN A 25 SHEET 3 AA1 3 GLU A 243 LYS A 244 -1 O GLU A 243 N ILE A 240 SHEET 1 AA2 2 GLN A 73 GLN A 77 0 SHEET 2 AA2 2 GLN A 87 CYS A 90 -1 O GLN A 87 N GLN A 77 SHEET 1 AA3 6 TRP A 204 ILE A 205 0 SHEET 2 AA3 6 TYR A 223 MSE A 229 -1 O TYR A 225 N ILE A 205 SHEET 3 AA3 6 GLU A 248 LEU A 255 -1 O ILE A 249 N MSE A 229 SHEET 4 AA3 6 GLY A 354 ARG A 361 -1 O TRP A 359 N GLY A 250 SHEET 5 AA3 6 GLU A 269 THR A 273 -1 N ILE A 270 O ALA A 360 SHEET 6 AA3 6 LEU A 329 PHE A 332 -1 O PHE A 332 N GLU A 269 SHEET 1 AA4 5 SER A 320 ASN A 321 0 SHEET 2 AA4 5 LYS A 284 MSE A 288 -1 N HIS A 285 O SER A 320 SHEET 3 AA4 5 ILE A 337 HIS A 341 -1 O HIS A 341 N LYS A 284 SHEET 4 AA4 5 SER A 259 TYR A 264 -1 N TYR A 260 O PHE A 340 SHEET 5 AA4 5 GLN A 372 LEU A 373 -1 O GLN A 372 N TYR A 264 SHEET 1 AA5 4 LYS A 296 SER A 300 0 SHEET 2 AA5 4 GLY A 303 ILE A 308 -1 O THR A 305 N LYS A 298 SHEET 3 AA5 4 ALA A 392 ASP A 397 -1 O ALA A 392 N ILE A 308 SHEET 4 AA5 4 ARG A 375 PRO A 376 -1 N ARG A 375 O ILE A 393 SSBOND 1 CYS A 26 CYS A 117 1555 1555 2.09 SSBOND 2 CYS A 68 CYS A 90 1555 1555 2.06 SSBOND 3 CYS A 279 CYS A 346 1555 1555 2.09 SSBOND 4 CYS A 374 CYS A 394 1555 1555 2.04 LINK C LYS A 85 N MSE A 86 1555 1555 1.32 LINK C MSE A 86 N GLN A 87 1555 1555 1.33 LINK C ILE A 91 N MSE A 92 1555 1555 1.33 LINK C MSE A 92 N LYS A 93 1555 1555 1.34 LINK C VAL A 228 N MSE A 229 1555 1555 1.33 LINK C MSE A 229 N GLY A 230 1555 1555 1.33 LINK C GLY A 250 N MSE A 251 1555 1555 1.33 LINK C MSE A 251 N THR A 252 1555 1555 1.34 LINK NE2 HIS A 265 ZN ZN A 500 1555 1555 2.20 LINK OE1 GLU A 269 ZN ZN A 500 1555 1555 2.10 LINK C TYR A 271 N MSE A 272 1555 1555 1.33 LINK C MSE A 272 N THR A 273 1555 1555 1.33 LINK C HIS A 285 N MSE A 286 1555 1555 1.32 LINK C MSE A 286 N VAL A 287 1555 1555 1.33 LINK C VAL A 287 N MSE A 288 1555 1555 1.33 LINK C MSE A 288 N HIS A 289 1555 1555 1.33 LINK NE2 HIS A 338 ZN ZN A 500 1555 1555 2.29 LINK C PRO A 376 N MSE A 377 1555 1555 1.33 LINK C MSE A 377 N THR A 378 1555 1555 1.33 LINK C THR A 385 N MSE A 386 1555 1555 1.33 LINK C MSE A 386 N LYS A 387 1555 1555 1.32 LINK ZN ZN A 500 O HOH A 608 1555 1555 2.57 LINK ZN ZN A 500 O HOH A 867 1555 1555 2.35 SITE 1 AC1 6 HIS A 263 HIS A 265 GLU A 269 HIS A 338 SITE 2 AC1 6 HOH A 608 HOH A 867 CRYST1 61.221 72.375 88.341 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016334 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013817 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011320 0.00000