HEADER TRANSPORT PROTEIN 11-MAY-17 5XLS TITLE CRYSTAL STRUCTURE OF URAA IN OCCLUDED CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: URACIL PERMEASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: URACIL TRANSPORTER; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O157:H7; SOURCE 3 ORGANISM_TAXID: 83334; SOURCE 4 GENE: URAA, Z3760, ECS3359; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OCCLUDED CONFORMATION, DIMER, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.Z.YU,G.H.YANG,C.Y.YAN,N.YAN REVDAT 3 22-NOV-23 5XLS 1 REMARK REVDAT 2 16-AUG-17 5XLS 1 JRNL REVDAT 1 05-JUL-17 5XLS 0 JRNL AUTH X.YU,G.YANG,C.YAN,J.L.BAYLON,J.JIANG,H.FAN,G.LU,K.HASEGAWA, JRNL AUTH 2 H.OKUMURA,T.WANG,E.TAJKHORSHID,S.LI,N.YAN JRNL TITL DIMERIC STRUCTURE OF THE URACIL:PROTON SYMPORTER URAA JRNL TITL 2 PROVIDES MECHANISTIC INSIGHTS INTO THE SLC4/23/26 JRNL TITL 3 TRANSPORTERS JRNL REF CELL RES. V. 27 1020 2017 JRNL REFN ISSN 1748-7838 JRNL PMID 28621327 JRNL DOI 10.1038/CR.2017.83 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.880 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 45247 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 2318 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.7926 - 6.4015 0.91 2497 122 0.2097 0.2405 REMARK 3 2 6.4015 - 5.0872 0.94 2533 148 0.2411 0.2437 REMARK 3 3 5.0872 - 4.4459 0.93 2530 159 0.2012 0.2112 REMARK 3 4 4.4459 - 4.0402 0.95 2564 136 0.1963 0.2079 REMARK 3 5 4.0402 - 3.7511 0.95 2604 119 0.2168 0.2178 REMARK 3 6 3.7511 - 3.5302 0.95 2551 143 0.2232 0.2385 REMARK 3 7 3.5302 - 3.3536 0.94 2555 160 0.2257 0.2705 REMARK 3 8 3.3536 - 3.2077 0.94 2561 131 0.2217 0.2557 REMARK 3 9 3.2077 - 3.0843 0.94 2540 143 0.2261 0.2381 REMARK 3 10 3.0843 - 2.9780 0.94 2564 140 0.2251 0.2755 REMARK 3 11 2.9780 - 2.8849 0.93 2490 181 0.2355 0.3078 REMARK 3 12 2.8849 - 2.8025 0.94 2547 145 0.2320 0.2255 REMARK 3 13 2.8025 - 2.7288 0.93 2546 124 0.2643 0.3056 REMARK 3 14 2.7288 - 2.6622 0.93 2523 100 0.2712 0.2926 REMARK 3 15 2.6622 - 2.6017 0.93 2626 113 0.2790 0.3112 REMARK 3 16 2.6017 - 2.5464 0.92 2480 124 0.3040 0.3260 REMARK 3 17 2.5464 - 2.4955 0.82 2218 130 0.3197 0.3224 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.47 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 42.51 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.032 3224 REMARK 3 ANGLE : 5.819 4641 REMARK 3 CHIRALITY : 0.107 545 REMARK 3 PLANARITY : 0.006 508 REMARK 3 DIHEDRAL : 27.981 1165 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 19.2014 15.5427 -12.0268 REMARK 3 T TENSOR REMARK 3 T11: 0.2660 T22: 0.3062 REMARK 3 T33: 0.2691 T12: -0.0113 REMARK 3 T13: -0.0449 T23: 0.0284 REMARK 3 L TENSOR REMARK 3 L11: 1.3514 L22: 2.4625 REMARK 3 L33: 1.8090 L12: 0.3102 REMARK 3 L13: 0.1043 L23: -0.3645 REMARK 3 S TENSOR REMARK 3 S11: -0.1286 S12: 0.1587 S13: 0.3056 REMARK 3 S21: -0.2776 S22: 0.1394 S23: 0.1665 REMARK 3 S31: -0.1521 S32: -0.0726 S33: -0.0229 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE FACTOR FILE CONTAINS REMARK 3 FRIEDEL PAIRS IN F_PLUS/MINUS AND I_PLUS/MINUS COLUMNS REMARK 4 REMARK 4 5XLS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1300003728. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49846 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11700 REMARK 200 FOR THE DATA SET : 18.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.55800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3QE7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG 400, 100MM MES-NAOH, PH 6.5, REMARK 280 100MM NAF, 50MM MGCL2, 3MM (NH4)2WS4, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.72600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.72600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.36050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 67.36300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.36050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 67.36300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 71.72600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.36050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 67.36300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 71.72600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.36050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 67.36300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ARG A 3 REMARK 465 ARG A 4 REMARK 465 ARG A 413 REMARK 465 PRO A 414 REMARK 465 GLU A 415 REMARK 465 GLU A 416 REMARK 465 VAL A 417 REMARK 465 VAL A 418 REMARK 465 LEU A 419 REMARK 465 ASP A 420 REMARK 465 GLU A 421 REMARK 465 VAL A 422 REMARK 465 ASP A 423 REMARK 465 ALA A 424 REMARK 465 ASP A 425 REMARK 465 ILE A 426 REMARK 465 THR A 427 REMARK 465 ASP A 428 REMARK 465 LYS A 429 REMARK 465 HIS A 430 REMARK 465 HIS A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 465 HIS A 435 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 321 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 224 O13 KEG A 502 8455 1.76 REMARK 500 CD GLU A 224 O13 KEG A 502 8455 1.86 REMARK 500 CD1 TRP A 225 O9 KEG A 502 8455 1.87 REMARK 500 OE1 GLU A 224 O13 KEG A 502 8455 1.99 REMARK 500 CD1 PHE A 226 O40 KEG A 502 8455 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 149 175.59 -58.86 REMARK 500 GLU A 150 -75.19 -18.21 REMARK 500 THR A 153 100.36 -55.85 REMARK 500 PRO A 154 132.34 -38.29 REMARK 500 PHE A 176 167.12 -38.84 REMARK 500 ASP A 256 65.04 -65.85 REMARK 500 ILE A 329 131.78 -38.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 MET A 334 -10.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 KEG A 502 REMARK 610 KEG A 503 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KEG A 503 W10 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 211 NE2 REMARK 620 2 KEG A 503 O12 66.4 REMARK 620 3 KEG A 503 O18 146.6 127.0 REMARK 620 4 KEG A 503 O28 88.6 75.6 69.3 REMARK 620 5 KEG A 503 O36 153.2 88.1 56.5 93.0 REMARK 620 6 KEG A 503 O42 129.2 116.6 76.0 142.2 54.3 REMARK 620 7 KEG A 503 O46 64.5 130.5 92.9 97.4 141.4 99.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KEG A 502 W11 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 224 OE2 REMARK 620 2 KEG A 502 O13 45.3 REMARK 620 3 KEG A 502 O19 130.1 152.6 REMARK 620 4 KEG A 502 O39 154.5 113.7 59.3 REMARK 620 5 KEG A 502 O40 76.1 95.4 109.9 126.1 REMARK 620 6 KEG A 502 O43 101.1 96.7 56.0 62.8 159.4 REMARK 620 7 KEG A 502 O44 71.8 116.8 64.7 124.0 71.3 88.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue URA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KEG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KEG A 503 DBREF 5XLS A 1 429 UNP P0AGM8 URAA_ECO57 1 429 SEQADV 5XLS GLU A 421 UNP P0AGM8 ALA 421 CONFLICT SEQADV 5XLS VAL A 422 UNP P0AGM8 GLU 422 CONFLICT SEQADV 5XLS HIS A 430 UNP P0AGM8 EXPRESSION TAG SEQADV 5XLS HIS A 431 UNP P0AGM8 EXPRESSION TAG SEQADV 5XLS HIS A 432 UNP P0AGM8 EXPRESSION TAG SEQADV 5XLS HIS A 433 UNP P0AGM8 EXPRESSION TAG SEQADV 5XLS HIS A 434 UNP P0AGM8 EXPRESSION TAG SEQADV 5XLS HIS A 435 UNP P0AGM8 EXPRESSION TAG SEQRES 1 A 435 MET THR ARG ARG ALA ILE GLY VAL SER GLU ARG PRO PRO SEQRES 2 A 435 LEU LEU GLN THR ILE PRO LEU SER LEU GLN HIS LEU PHE SEQRES 3 A 435 ALA MET PHE GLY ALA THR VAL LEU VAL PRO VAL LEU PHE SEQRES 4 A 435 HIS ILE ASN PRO ALA THR VAL LEU LEU PHE ASN GLY ILE SEQRES 5 A 435 GLY THR LEU LEU TYR LEU PHE ILE CYS LYS GLY LYS ILE SEQRES 6 A 435 PRO ALA TYR LEU GLY SER SER PHE ALA PHE ILE SER PRO SEQRES 7 A 435 VAL LEU LEU LEU LEU PRO LEU GLY TYR GLU VAL ALA LEU SEQRES 8 A 435 GLY GLY PHE ILE MET CYS GLY VAL LEU PHE CYS LEU VAL SEQRES 9 A 435 SER PHE ILE VAL LYS LYS ALA GLY THR GLY TRP LEU ASP SEQRES 10 A 435 VAL LEU PHE PRO PRO ALA ALA MET GLY ALA ILE VAL ALA SEQRES 11 A 435 VAL ILE GLY LEU GLU LEU ALA GLY VAL ALA ALA GLY MET SEQRES 12 A 435 ALA GLY LEU LEU PRO ALA GLU GLY GLN THR PRO ASP SER SEQRES 13 A 435 LYS THR ILE ILE ILE SER ILE THR THR LEU ALA VAL THR SEQRES 14 A 435 VAL LEU GLY SER VAL LEU PHE ARG GLY PHE LEU ALA ILE SEQRES 15 A 435 ILE PRO ILE LEU ILE GLY VAL LEU VAL GLY TYR ALA LEU SEQRES 16 A 435 SER PHE ALA MET GLY ILE VAL ASP THR THR PRO ILE ILE SEQRES 17 A 435 ASN ALA HIS TRP PHE ALA LEU PRO THR LEU TYR THR PRO SEQRES 18 A 435 ARG PHE GLU TRP PHE ALA ILE LEU THR ILE LEU PRO ALA SEQRES 19 A 435 ALA LEU VAL VAL ILE ALA GLU HIS VAL GLY HIS LEU VAL SEQRES 20 A 435 VAL THR ALA ASN ILE VAL LYS LYS ASP LEU LEU ARG ASP SEQRES 21 A 435 PRO GLY LEU HIS ARG SER MET PHE ALA ASN GLY LEU SER SEQRES 22 A 435 THR VAL ILE SER GLY PHE PHE GLY SER THR PRO ASN THR SEQRES 23 A 435 THR TYR GLY GLU ASN ILE GLY VAL MET ALA ILE THR ARG SEQRES 24 A 435 VAL TYR SER THR TRP VAL ILE GLY GLY ALA ALA ILE PHE SEQRES 25 A 435 ALA ILE LEU LEU SER CYS VAL GLY LYS LEU ALA ALA ALA SEQRES 26 A 435 ILE GLN MET ILE PRO LEU PRO VAL MET GLY GLY VAL SER SEQRES 27 A 435 LEU LEU LEU TYR GLY VAL ILE GLY ALA SER GLY ILE ARG SEQRES 28 A 435 VAL LEU ILE GLU SER LYS VAL ASP TYR ASN LYS ALA GLN SEQRES 29 A 435 ASN LEU ILE LEU THR SER VAL ILE LEU ILE ILE GLY VAL SEQRES 30 A 435 SER GLY ALA LYS VAL ASN ILE GLY ALA ALA GLU LEU LYS SEQRES 31 A 435 GLY MET ALA LEU ALA THR ILE VAL GLY ILE GLY LEU SER SEQRES 32 A 435 LEU ILE PHE LYS LEU ILE SER VAL LEU ARG PRO GLU GLU SEQRES 33 A 435 VAL VAL LEU ASP GLU VAL ASP ALA ASP ILE THR ASP LYS SEQRES 34 A 435 HIS HIS HIS HIS HIS HIS HET URA A 501 8 HET KEG A 502 52 HET KEG A 503 52 HETNAM URA URACIL HETNAM KEG 12-TUNGSTOPHOSPHATE FORMUL 2 URA C4 H4 N2 O2 FORMUL 3 KEG 2(O40 P W12) FORMUL 5 HOH *42(H2 O) HELIX 1 AA1 PRO A 13 HIS A 40 1 28 HELIX 2 AA2 ASN A 42 CYS A 61 1 20 HELIX 3 AA3 PHE A 75 LEU A 83 1 9 HELIX 4 AA4 PRO A 84 GLY A 86 5 3 HELIX 5 AA5 TYR A 87 GLY A 112 1 26 HELIX 6 AA6 TRP A 115 PHE A 120 1 6 HELIX 7 AA7 PRO A 121 GLU A 135 1 15 HELIX 8 AA8 LEU A 136 ALA A 144 1 9 HELIX 9 AA9 ASP A 155 PHE A 176 1 22 HELIX 10 AB1 PHE A 179 ILE A 182 5 4 HELIX 11 AB2 ILE A 183 MET A 199 1 17 HELIX 12 AB3 THR A 204 ILE A 208 5 5 HELIX 13 AB4 GLU A 224 LYS A 254 1 31 HELIX 14 AB5 GLY A 262 PHE A 280 1 19 HELIX 15 AB6 TYR A 288 ARG A 299 1 12 HELIX 16 AB7 SER A 302 VAL A 319 1 18 HELIX 17 AB8 VAL A 319 ILE A 329 1 11 HELIX 18 AB9 PRO A 330 SER A 356 1 27 HELIX 19 AC1 LYS A 362 GLY A 379 1 18 HELIX 20 AC2 GLY A 391 LEU A 412 1 22 SHEET 1 AA1 2 LEU A 69 SER A 71 0 SHEET 2 AA1 2 ASN A 285 THR A 287 -1 O THR A 286 N GLY A 70 SHEET 1 AA2 2 LYS A 381 ILE A 384 0 SHEET 2 AA2 2 ALA A 387 LYS A 390 -1 O ALA A 387 N ILE A 384 LINK NE2 HIS A 211 W10 KEG A 503 1555 3554 3.26 LINK OE2 GLU A 224 W11 KEG A 502 1555 8455 2.43 CISPEP 1 ASP A 260 PRO A 261 0 2.73 SITE 1 AC1 14 ALA A 31 SER A 71 SER A 72 PHE A 73 SITE 2 AC1 14 ILE A 132 GLU A 241 HIS A 245 THR A 286 SITE 3 AC1 14 THR A 287 TYR A 288 GLY A 289 GLU A 290 SITE 4 AC1 14 ILE A 345 HOH A 603 SITE 1 AC2 7 LYS A 62 LYS A 109 GLU A 224 TRP A 225 SITE 2 AC2 7 PHE A 226 HIS A 264 ARG A 265 SITE 1 AC3 4 ALA A 210 HIS A 211 TRP A 212 PHE A 213 CRYST1 74.721 134.726 143.452 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013383 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007422 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006971 0.00000