data_5XME # _entry.id 5XME # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.284 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5XME WWPDB D_1300002564 BMRB 36084 # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 36084 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5XME _pdbx_database_status.recvd_initial_deposition_date 2017-05-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lin, Z.' 1 ? 'Zhang, N.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 7073 _citation.page_last 7073 _citation.title 'Structure of the C-terminal domain of TRADD reveals a novel fold in the death domain superfamily.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41598-017-07348-9 _citation.pdbx_database_id_PubMed 28765645 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Zhang, N.' 1 primary 'Yuan, W.' 2 primary 'Fan, J.S.' 3 primary 'Lin, Z.' 4 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Tumor necrosis factor receptor type 1-associated DEATH domain protein' _entity.formula_weight 14429.224 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP RESIDUES 199-312' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TNFR1-associated DEATH domain protein,TNFRSF1A-associated via death domain' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHSSGRGSAQTFLFQGQPVVNRPLSLKDQQTFARSVGLKWRKVGRSLQRGCRALRDPALDSLAYEYEREGLYEQA FQLLRRFVQAEGRRATLQRLVEALEENELTSLAEDLLGLTDPNGGLA ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGRGSAQTFLFQGQPVVNRPLSLKDQQTFARSVGLKWRKVGRSLQRGCRALRDPALDSLAYEYEREGLYEQA FQLLRRFVQAEGRRATLQRLVEALEENELTSLAEDLLGLTDPNGGLA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 ARG n 1 12 GLY n 1 13 SER n 1 14 ALA n 1 15 GLN n 1 16 THR n 1 17 PHE n 1 18 LEU n 1 19 PHE n 1 20 GLN n 1 21 GLY n 1 22 GLN n 1 23 PRO n 1 24 VAL n 1 25 VAL n 1 26 ASN n 1 27 ARG n 1 28 PRO n 1 29 LEU n 1 30 SER n 1 31 LEU n 1 32 LYS n 1 33 ASP n 1 34 GLN n 1 35 GLN n 1 36 THR n 1 37 PHE n 1 38 ALA n 1 39 ARG n 1 40 SER n 1 41 VAL n 1 42 GLY n 1 43 LEU n 1 44 LYS n 1 45 TRP n 1 46 ARG n 1 47 LYS n 1 48 VAL n 1 49 GLY n 1 50 ARG n 1 51 SER n 1 52 LEU n 1 53 GLN n 1 54 ARG n 1 55 GLY n 1 56 CYS n 1 57 ARG n 1 58 ALA n 1 59 LEU n 1 60 ARG n 1 61 ASP n 1 62 PRO n 1 63 ALA n 1 64 LEU n 1 65 ASP n 1 66 SER n 1 67 LEU n 1 68 ALA n 1 69 TYR n 1 70 GLU n 1 71 TYR n 1 72 GLU n 1 73 ARG n 1 74 GLU n 1 75 GLY n 1 76 LEU n 1 77 TYR n 1 78 GLU n 1 79 GLN n 1 80 ALA n 1 81 PHE n 1 82 GLN n 1 83 LEU n 1 84 LEU n 1 85 ARG n 1 86 ARG n 1 87 PHE n 1 88 VAL n 1 89 GLN n 1 90 ALA n 1 91 GLU n 1 92 GLY n 1 93 ARG n 1 94 ARG n 1 95 ALA n 1 96 THR n 1 97 LEU n 1 98 GLN n 1 99 ARG n 1 100 LEU n 1 101 VAL n 1 102 GLU n 1 103 ALA n 1 104 LEU n 1 105 GLU n 1 106 GLU n 1 107 ASN n 1 108 GLU n 1 109 LEU n 1 110 THR n 1 111 SER n 1 112 LEU n 1 113 ALA n 1 114 GLU n 1 115 ASP n 1 116 LEU n 1 117 LEU n 1 118 GLY n 1 119 LEU n 1 120 THR n 1 121 ASP n 1 122 PRO n 1 123 ASN n 1 124 GLY n 1 125 GLY n 1 126 LEU n 1 127 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 127 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TRADD _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TRADD_HUMAN _struct_ref.pdbx_db_accession Q15628 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AQTFLFQGQPVVNRPLSLKDQQTFARSVGLKWRKVGRSLQRGCRALRDPALDSLAYEYEREGLYEQAFQLLRRFVQAEGR RATLQRLVEALEENELTSLAEDLLGLTDPNGGLA ; _struct_ref.pdbx_align_begin 199 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5XME _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 14 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 127 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q15628 _struct_ref_seq.db_align_beg 199 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 312 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 199 _struct_ref_seq.pdbx_auth_seq_align_end 312 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5XME MET A 1 ? UNP Q15628 ? ? 'expression tag' 186 1 1 5XME HIS A 2 ? UNP Q15628 ? ? 'expression tag' 187 2 1 5XME HIS A 3 ? UNP Q15628 ? ? 'expression tag' 188 3 1 5XME HIS A 4 ? UNP Q15628 ? ? 'expression tag' 189 4 1 5XME HIS A 5 ? UNP Q15628 ? ? 'expression tag' 190 5 1 5XME HIS A 6 ? UNP Q15628 ? ? 'expression tag' 191 6 1 5XME HIS A 7 ? UNP Q15628 ? ? 'expression tag' 192 7 1 5XME SER A 8 ? UNP Q15628 ? ? 'expression tag' 193 8 1 5XME SER A 9 ? UNP Q15628 ? ? 'expression tag' 194 9 1 5XME GLY A 10 ? UNP Q15628 ? ? 'expression tag' 195 10 1 5XME ARG A 11 ? UNP Q15628 ? ? 'expression tag' 196 11 1 5XME GLY A 12 ? UNP Q15628 ? ? 'expression tag' 197 12 1 5XME SER A 13 ? UNP Q15628 ? ? 'expression tag' 198 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '2D 1H-13C HSQC aromatic' 1 isotropic 3 1 1 '2D 1H-13C HSQC aliphatic' 1 isotropic 4 1 1 '3D HNCA' 1 isotropic 5 1 1 '3D HN(CO)CA' 1 isotropic 6 1 1 '3D HCCH-TOCSY' 1 isotropic 7 1 1 '4D 13C, 15N-edited NOESY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 301 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 5.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength . _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label sample_conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.6 mM U-99% 13C; U-99% 15N;U-98% 2H TRADD DD, 95% H2O/5% D2O' _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' _pdbx_nmr_sample_details.label sample_1 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model Avance _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 5XME _pdbx_nmr_refine.method 'torsion angle dynamics, molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 5XME _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5XME _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement AMBER ? 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman' 2 processing NMRpipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 3 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 4 'data analysis' NMRView ? 'Johnson, One Moon Scientific' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5XME _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5XME _struct.title 'Solution structure of C-terminal domain of TRADD' _struct.pdbx_descriptor 'TRADD DD' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5XME _struct_keywords.text 'TRADD, death domain, APOPTOSIS' _struct_keywords.pdbx_keywords APOPTOSIS # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 30 ? GLY A 42 ? SER A 215 GLY A 227 1 ? 13 HELX_P HELX_P2 AA2 LYS A 44 ? CYS A 56 ? LYS A 229 CYS A 241 1 ? 13 HELX_P HELX_P3 AA3 ARG A 57 ? ARG A 60 ? ARG A 242 ARG A 245 5 ? 4 HELX_P HELX_P4 AA4 PRO A 62 ? TYR A 71 ? PRO A 247 TYR A 256 1 ? 10 HELX_P HELX_P5 AA5 GLY A 75 ? GLU A 91 ? GLY A 260 GLU A 276 1 ? 17 HELX_P HELX_P6 AA6 THR A 96 ? GLU A 108 ? THR A 281 GLU A 293 1 ? 13 HELX_P HELX_P7 AA7 LEU A 109 ? LEU A 117 ? LEU A 294 LEU A 302 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 16 ? PHE A 19 ? THR A 201 PHE A 204 AA1 2 GLN A 22 ? VAL A 25 ? GLN A 207 VAL A 210 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id PHE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 19 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id PHE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 204 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id GLN _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 22 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id GLN _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 207 # _atom_sites.entry_id 5XME _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 186 ? ? ? A . n A 1 2 HIS 2 187 ? ? ? A . n A 1 3 HIS 3 188 ? ? ? A . n A 1 4 HIS 4 189 ? ? ? A . n A 1 5 HIS 5 190 ? ? ? A . n A 1 6 HIS 6 191 ? ? ? A . n A 1 7 HIS 7 192 ? ? ? A . n A 1 8 SER 8 193 ? ? ? A . n A 1 9 SER 9 194 ? ? ? A . n A 1 10 GLY 10 195 ? ? ? A . n A 1 11 ARG 11 196 ? ? ? A . n A 1 12 GLY 12 197 ? ? ? A . n A 1 13 SER 13 198 ? ? ? A . n A 1 14 ALA 14 199 199 ALA ALA A . n A 1 15 GLN 15 200 200 GLN GLN A . n A 1 16 THR 16 201 201 THR THR A . n A 1 17 PHE 17 202 202 PHE PHE A . n A 1 18 LEU 18 203 203 LEU LEU A . n A 1 19 PHE 19 204 204 PHE PHE A . n A 1 20 GLN 20 205 205 GLN GLN A . n A 1 21 GLY 21 206 206 GLY GLY A . n A 1 22 GLN 22 207 207 GLN GLN A . n A 1 23 PRO 23 208 208 PRO PRO A . n A 1 24 VAL 24 209 209 VAL VAL A . n A 1 25 VAL 25 210 210 VAL VAL A . n A 1 26 ASN 26 211 211 ASN ASN A . n A 1 27 ARG 27 212 212 ARG ARG A . n A 1 28 PRO 28 213 213 PRO PRO A . n A 1 29 LEU 29 214 214 LEU LEU A . n A 1 30 SER 30 215 215 SER SER A . n A 1 31 LEU 31 216 216 LEU LEU A . n A 1 32 LYS 32 217 217 LYS LYS A . n A 1 33 ASP 33 218 218 ASP ASP A . n A 1 34 GLN 34 219 219 GLN GLN A . n A 1 35 GLN 35 220 220 GLN GLN A . n A 1 36 THR 36 221 221 THR THR A . n A 1 37 PHE 37 222 222 PHE PHE A . n A 1 38 ALA 38 223 223 ALA ALA A . n A 1 39 ARG 39 224 224 ARG ARG A . n A 1 40 SER 40 225 225 SER SER A . n A 1 41 VAL 41 226 226 VAL VAL A . n A 1 42 GLY 42 227 227 GLY GLY A . n A 1 43 LEU 43 228 228 LEU LEU A . n A 1 44 LYS 44 229 229 LYS LYS A . n A 1 45 TRP 45 230 230 TRP TRP A . n A 1 46 ARG 46 231 231 ARG ARG A . n A 1 47 LYS 47 232 232 LYS LYS A . n A 1 48 VAL 48 233 233 VAL VAL A . n A 1 49 GLY 49 234 234 GLY GLY A . n A 1 50 ARG 50 235 235 ARG ARG A . n A 1 51 SER 51 236 236 SER SER A . n A 1 52 LEU 52 237 237 LEU LEU A . n A 1 53 GLN 53 238 238 GLN GLN A . n A 1 54 ARG 54 239 239 ARG ARG A . n A 1 55 GLY 55 240 240 GLY GLY A . n A 1 56 CYS 56 241 241 CYS CYS A . n A 1 57 ARG 57 242 242 ARG ARG A . n A 1 58 ALA 58 243 243 ALA ALA A . n A 1 59 LEU 59 244 244 LEU LEU A . n A 1 60 ARG 60 245 245 ARG ARG A . n A 1 61 ASP 61 246 246 ASP ASP A . n A 1 62 PRO 62 247 247 PRO PRO A . n A 1 63 ALA 63 248 248 ALA ALA A . n A 1 64 LEU 64 249 249 LEU LEU A . n A 1 65 ASP 65 250 250 ASP ASP A . n A 1 66 SER 66 251 251 SER SER A . n A 1 67 LEU 67 252 252 LEU LEU A . n A 1 68 ALA 68 253 253 ALA ALA A . n A 1 69 TYR 69 254 254 TYR TYR A . n A 1 70 GLU 70 255 255 GLU GLU A . n A 1 71 TYR 71 256 256 TYR TYR A . n A 1 72 GLU 72 257 257 GLU GLU A . n A 1 73 ARG 73 258 258 ARG ARG A . n A 1 74 GLU 74 259 259 GLU GLU A . n A 1 75 GLY 75 260 260 GLY GLY A . n A 1 76 LEU 76 261 261 LEU LEU A . n A 1 77 TYR 77 262 262 TYR TYR A . n A 1 78 GLU 78 263 263 GLU GLU A . n A 1 79 GLN 79 264 264 GLN GLN A . n A 1 80 ALA 80 265 265 ALA ALA A . n A 1 81 PHE 81 266 266 PHE PHE A . n A 1 82 GLN 82 267 267 GLN GLN A . n A 1 83 LEU 83 268 268 LEU LEU A . n A 1 84 LEU 84 269 269 LEU LEU A . n A 1 85 ARG 85 270 270 ARG ARG A . n A 1 86 ARG 86 271 271 ARG ARG A . n A 1 87 PHE 87 272 272 PHE PHE A . n A 1 88 VAL 88 273 273 VAL VAL A . n A 1 89 GLN 89 274 274 GLN GLN A . n A 1 90 ALA 90 275 275 ALA ALA A . n A 1 91 GLU 91 276 276 GLU GLU A . n A 1 92 GLY 92 277 277 GLY GLY A . n A 1 93 ARG 93 278 278 ARG ARG A . n A 1 94 ARG 94 279 279 ARG ARG A . n A 1 95 ALA 95 280 280 ALA ALA A . n A 1 96 THR 96 281 281 THR THR A . n A 1 97 LEU 97 282 282 LEU LEU A . n A 1 98 GLN 98 283 283 GLN GLN A . n A 1 99 ARG 99 284 284 ARG ARG A . n A 1 100 LEU 100 285 285 LEU LEU A . n A 1 101 VAL 101 286 286 VAL VAL A . n A 1 102 GLU 102 287 287 GLU GLU A . n A 1 103 ALA 103 288 288 ALA ALA A . n A 1 104 LEU 104 289 289 LEU LEU A . n A 1 105 GLU 105 290 290 GLU GLU A . n A 1 106 GLU 106 291 291 GLU GLU A . n A 1 107 ASN 107 292 292 ASN ASN A . n A 1 108 GLU 108 293 293 GLU GLU A . n A 1 109 LEU 109 294 294 LEU LEU A . n A 1 110 THR 110 295 295 THR THR A . n A 1 111 SER 111 296 296 SER SER A . n A 1 112 LEU 112 297 297 LEU LEU A . n A 1 113 ALA 113 298 298 ALA ALA A . n A 1 114 GLU 114 299 299 GLU GLU A . n A 1 115 ASP 115 300 300 ASP ASP A . n A 1 116 LEU 116 301 301 LEU LEU A . n A 1 117 LEU 117 302 302 LEU LEU A . n A 1 118 GLY 118 303 303 GLY GLY A . n A 1 119 LEU 119 304 304 LEU LEU A . n A 1 120 THR 120 305 305 THR THR A . n A 1 121 ASP 121 306 306 ASP ASP A . n A 1 122 PRO 122 307 307 PRO PRO A . n A 1 123 ASN 123 308 308 ASN ASN A . n A 1 124 GLY 124 309 309 GLY GLY A . n A 1 125 GLY 125 310 310 GLY GLY A . n A 1 126 LEU 126 311 311 LEU LEU A . n A 1 127 ALA 127 312 312 ALA ALA A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 7190 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2017-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component 'TRADD DD' _pdbx_nmr_exptl_sample.concentration 0.6 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'U-99% 13C; U-99% 15N;U-98% 2H' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 247 ? ? -68.06 39.53 2 1 GLU A 276 ? ? -132.77 -51.33 3 1 GLU A 293 ? ? 71.19 35.54 4 1 LEU A 294 ? ? -91.50 55.37 5 1 PRO A 307 ? ? -69.16 16.92 6 1 ASN A 308 ? ? -145.88 -63.02 7 2 PHE A 222 ? ? -57.51 -71.03 8 2 PRO A 247 ? ? -68.07 29.84 9 2 GLU A 276 ? ? -134.74 -51.56 10 2 LEU A 294 ? ? -98.80 58.78 11 2 PRO A 307 ? ? -68.60 11.76 12 2 ASN A 308 ? ? -165.40 -55.87 13 3 GLN A 200 ? ? -59.55 104.76 14 3 PHE A 222 ? ? -56.57 -72.30 15 3 PRO A 247 ? ? -67.03 32.06 16 3 GLU A 276 ? ? -132.30 -51.33 17 3 LEU A 294 ? ? -97.20 57.39 18 4 PHE A 222 ? ? -56.94 -71.24 19 4 PRO A 247 ? ? -69.09 47.45 20 4 GLU A 276 ? ? -132.36 -50.42 21 4 LEU A 294 ? ? -96.36 56.25 22 5 PHE A 222 ? ? -57.60 -70.83 23 5 PRO A 247 ? ? -69.54 32.74 24 5 GLU A 276 ? ? -133.25 -51.52 25 5 ALA A 280 ? ? -52.63 102.80 26 5 GLU A 293 ? ? 70.47 36.21 27 5 LEU A 294 ? ? -96.06 57.22 28 5 PRO A 307 ? ? -69.40 12.31 29 5 ASN A 308 ? ? -166.88 81.09 30 6 PRO A 247 ? ? -66.93 30.96 31 6 GLU A 276 ? ? -134.52 -51.50 32 6 ALA A 280 ? ? -55.19 99.53 33 6 LEU A 294 ? ? -97.03 57.08 34 6 PRO A 307 ? ? -70.73 21.63 35 7 GLN A 200 ? ? -59.82 104.37 36 7 PHE A 222 ? ? -55.69 -71.41 37 7 PRO A 247 ? ? -67.35 32.59 38 7 GLU A 276 ? ? -133.24 -50.33 39 7 LEU A 294 ? ? -98.54 54.73 40 7 PRO A 307 ? ? -69.74 20.29 41 7 LEU A 311 ? ? 59.29 -173.01 42 8 PHE A 222 ? ? -56.34 -72.64 43 8 PRO A 247 ? ? -68.22 32.79 44 8 GLU A 276 ? ? -134.07 -51.85 45 8 LEU A 294 ? ? -93.70 54.53 46 8 PRO A 307 ? ? -68.13 18.07 47 9 PHE A 222 ? ? -55.52 -70.56 48 9 PRO A 247 ? ? -67.29 29.73 49 9 GLU A 276 ? ? -131.67 -51.55 50 9 ALA A 280 ? ? -52.42 103.63 51 9 LEU A 294 ? ? -96.54 57.65 52 9 PRO A 307 ? ? -68.40 18.64 53 9 LEU A 311 ? ? -171.97 135.77 54 10 GLN A 200 ? ? -59.80 104.97 55 10 PHE A 222 ? ? -55.27 -71.69 56 10 PRO A 247 ? ? -67.25 29.86 57 10 GLU A 276 ? ? -133.25 -51.12 58 10 LEU A 294 ? ? -95.92 56.66 59 10 PRO A 307 ? ? -67.78 13.10 60 10 ASN A 308 ? ? -170.69 88.77 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 186 ? A MET 1 2 1 Y 1 A HIS 187 ? A HIS 2 3 1 Y 1 A HIS 188 ? A HIS 3 4 1 Y 1 A HIS 189 ? A HIS 4 5 1 Y 1 A HIS 190 ? A HIS 5 6 1 Y 1 A HIS 191 ? A HIS 6 7 1 Y 1 A HIS 192 ? A HIS 7 8 1 Y 1 A SER 193 ? A SER 8 9 1 Y 1 A SER 194 ? A SER 9 10 1 Y 1 A GLY 195 ? A GLY 10 11 1 Y 1 A ARG 196 ? A ARG 11 12 1 Y 1 A GLY 197 ? A GLY 12 13 1 Y 1 A SER 198 ? A SER 13 14 2 Y 1 A MET 186 ? A MET 1 15 2 Y 1 A HIS 187 ? A HIS 2 16 2 Y 1 A HIS 188 ? A HIS 3 17 2 Y 1 A HIS 189 ? A HIS 4 18 2 Y 1 A HIS 190 ? A HIS 5 19 2 Y 1 A HIS 191 ? A HIS 6 20 2 Y 1 A HIS 192 ? A HIS 7 21 2 Y 1 A SER 193 ? A SER 8 22 2 Y 1 A SER 194 ? A SER 9 23 2 Y 1 A GLY 195 ? A GLY 10 24 2 Y 1 A ARG 196 ? A ARG 11 25 2 Y 1 A GLY 197 ? A GLY 12 26 2 Y 1 A SER 198 ? A SER 13 27 3 Y 1 A MET 186 ? A MET 1 28 3 Y 1 A HIS 187 ? A HIS 2 29 3 Y 1 A HIS 188 ? A HIS 3 30 3 Y 1 A HIS 189 ? A HIS 4 31 3 Y 1 A HIS 190 ? A HIS 5 32 3 Y 1 A HIS 191 ? A HIS 6 33 3 Y 1 A HIS 192 ? A HIS 7 34 3 Y 1 A SER 193 ? A SER 8 35 3 Y 1 A SER 194 ? A SER 9 36 3 Y 1 A GLY 195 ? A GLY 10 37 3 Y 1 A ARG 196 ? A ARG 11 38 3 Y 1 A GLY 197 ? A GLY 12 39 3 Y 1 A SER 198 ? A SER 13 40 4 Y 1 A MET 186 ? A MET 1 41 4 Y 1 A HIS 187 ? A HIS 2 42 4 Y 1 A HIS 188 ? A HIS 3 43 4 Y 1 A HIS 189 ? A HIS 4 44 4 Y 1 A HIS 190 ? A HIS 5 45 4 Y 1 A HIS 191 ? A HIS 6 46 4 Y 1 A HIS 192 ? A HIS 7 47 4 Y 1 A SER 193 ? A SER 8 48 4 Y 1 A SER 194 ? A SER 9 49 4 Y 1 A GLY 195 ? A GLY 10 50 4 Y 1 A ARG 196 ? A ARG 11 51 4 Y 1 A GLY 197 ? A GLY 12 52 4 Y 1 A SER 198 ? A SER 13 53 5 Y 1 A MET 186 ? A MET 1 54 5 Y 1 A HIS 187 ? A HIS 2 55 5 Y 1 A HIS 188 ? A HIS 3 56 5 Y 1 A HIS 189 ? A HIS 4 57 5 Y 1 A HIS 190 ? A HIS 5 58 5 Y 1 A HIS 191 ? A HIS 6 59 5 Y 1 A HIS 192 ? A HIS 7 60 5 Y 1 A SER 193 ? A SER 8 61 5 Y 1 A SER 194 ? A SER 9 62 5 Y 1 A GLY 195 ? A GLY 10 63 5 Y 1 A ARG 196 ? A ARG 11 64 5 Y 1 A GLY 197 ? A GLY 12 65 5 Y 1 A SER 198 ? A SER 13 66 6 Y 1 A MET 186 ? A MET 1 67 6 Y 1 A HIS 187 ? A HIS 2 68 6 Y 1 A HIS 188 ? A HIS 3 69 6 Y 1 A HIS 189 ? A HIS 4 70 6 Y 1 A HIS 190 ? A HIS 5 71 6 Y 1 A HIS 191 ? A HIS 6 72 6 Y 1 A HIS 192 ? A HIS 7 73 6 Y 1 A SER 193 ? A SER 8 74 6 Y 1 A SER 194 ? A SER 9 75 6 Y 1 A GLY 195 ? A GLY 10 76 6 Y 1 A ARG 196 ? A ARG 11 77 6 Y 1 A GLY 197 ? A GLY 12 78 6 Y 1 A SER 198 ? A SER 13 79 7 Y 1 A MET 186 ? A MET 1 80 7 Y 1 A HIS 187 ? A HIS 2 81 7 Y 1 A HIS 188 ? A HIS 3 82 7 Y 1 A HIS 189 ? A HIS 4 83 7 Y 1 A HIS 190 ? A HIS 5 84 7 Y 1 A HIS 191 ? A HIS 6 85 7 Y 1 A HIS 192 ? A HIS 7 86 7 Y 1 A SER 193 ? A SER 8 87 7 Y 1 A SER 194 ? A SER 9 88 7 Y 1 A GLY 195 ? A GLY 10 89 7 Y 1 A ARG 196 ? A ARG 11 90 7 Y 1 A GLY 197 ? A GLY 12 91 7 Y 1 A SER 198 ? A SER 13 92 8 Y 1 A MET 186 ? A MET 1 93 8 Y 1 A HIS 187 ? A HIS 2 94 8 Y 1 A HIS 188 ? A HIS 3 95 8 Y 1 A HIS 189 ? A HIS 4 96 8 Y 1 A HIS 190 ? A HIS 5 97 8 Y 1 A HIS 191 ? A HIS 6 98 8 Y 1 A HIS 192 ? A HIS 7 99 8 Y 1 A SER 193 ? A SER 8 100 8 Y 1 A SER 194 ? A SER 9 101 8 Y 1 A GLY 195 ? A GLY 10 102 8 Y 1 A ARG 196 ? A ARG 11 103 8 Y 1 A GLY 197 ? A GLY 12 104 8 Y 1 A SER 198 ? A SER 13 105 9 Y 1 A MET 186 ? A MET 1 106 9 Y 1 A HIS 187 ? A HIS 2 107 9 Y 1 A HIS 188 ? A HIS 3 108 9 Y 1 A HIS 189 ? A HIS 4 109 9 Y 1 A HIS 190 ? A HIS 5 110 9 Y 1 A HIS 191 ? A HIS 6 111 9 Y 1 A HIS 192 ? A HIS 7 112 9 Y 1 A SER 193 ? A SER 8 113 9 Y 1 A SER 194 ? A SER 9 114 9 Y 1 A GLY 195 ? A GLY 10 115 9 Y 1 A ARG 196 ? A ARG 11 116 9 Y 1 A GLY 197 ? A GLY 12 117 9 Y 1 A SER 198 ? A SER 13 118 10 Y 1 A MET 186 ? A MET 1 119 10 Y 1 A HIS 187 ? A HIS 2 120 10 Y 1 A HIS 188 ? A HIS 3 121 10 Y 1 A HIS 189 ? A HIS 4 122 10 Y 1 A HIS 190 ? A HIS 5 123 10 Y 1 A HIS 191 ? A HIS 6 124 10 Y 1 A HIS 192 ? A HIS 7 125 10 Y 1 A SER 193 ? A SER 8 126 10 Y 1 A SER 194 ? A SER 9 127 10 Y 1 A GLY 195 ? A GLY 10 128 10 Y 1 A ARG 196 ? A ARG 11 129 10 Y 1 A GLY 197 ? A GLY 12 130 10 Y 1 A SER 198 ? A SER 13 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #