HEADER MEMBRANE PROTEIN 24-MAY-17 5XNQ TITLE CRYSTAL STRUCTURES OF HUMAN SALM5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEUCINE-RICH REPEAT AND FIBRONECTIN TYPE-III DOMAIN- COMPND 3 CONTAINING PROTEIN 5; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 18-375; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LRFN5, C14ORF146, SALM5; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293S GNTI-; SOURCE 9 EXPRESSION_SYSTEM_ATCC_NUMBER: CRL-3022; SOURCE 10 EXPRESSION_SYSTEM_ORGAN: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_TISSUE: EMBRYONIC KIDNEY; SOURCE 12 EXPRESSION_SYSTEM_CELL: HEK293S GNTI- KEYWDS REGULATING SOME NEURAL DEVELOPMENTS, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.LIU,Z.LIN,F.XU REVDAT 3 29-JUL-20 5XNQ 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 07-FEB-18 5XNQ 1 JRNL REVDAT 1 24-JAN-18 5XNQ 0 JRNL AUTH Z.LIN,J.LIU,H.DING,F.XU,H.LIU JRNL TITL STRUCTURAL BASIS OF SALM5-INDUCED PTP DELTA DIMERIZATION FOR JRNL TITL 2 SYNAPTIC DIFFERENTIATION JRNL REF NAT COMMUN V. 9 268 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 29348579 JRNL DOI 10.1038/S41467-017-02414-2 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 16105 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.8795 - 5.0884 0.97 2684 137 0.2368 0.2379 REMARK 3 2 5.0884 - 4.0401 0.98 2568 128 0.2029 0.2278 REMARK 3 3 4.0401 - 3.5297 0.99 2548 138 0.2448 0.2639 REMARK 3 4 3.5297 - 3.2072 0.99 2516 129 0.2945 0.3549 REMARK 3 5 3.2072 - 2.9774 1.00 2534 122 0.3618 0.3756 REMARK 3 6 2.9774 - 2.8019 0.98 2444 157 0.3336 0.4155 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2310 REMARK 3 ANGLE : 0.805 3147 REMARK 3 CHIRALITY : 0.051 368 REMARK 3 PLANARITY : 0.005 406 REMARK 3 DIHEDRAL : 14.109 1420 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XNQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1300003528. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JAN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 - 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16115 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 36.8750 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.58800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2% PEG 3000, 0.1 M SODIUM ACETATE, 0.2 REMARK 280 M LITHIUM SULFATE, PH 4.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.91100 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.91100 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 46.91100 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 46.91100 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 46.91100 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 46.91100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -206.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -46.91100 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 288 REMARK 465 ILE A 289 REMARK 465 THR A 290 REMARK 465 ARG A 291 REMARK 465 HIS A 292 REMARK 465 THR A 293 REMARK 465 HIS A 294 REMARK 465 GLU A 295 REMARK 465 MET A 296 REMARK 465 ARG A 297 REMARK 465 VAL A 298 REMARK 465 LEU A 299 REMARK 465 GLU A 300 REMARK 465 GLY A 301 REMARK 465 GLN A 302 REMARK 465 ARG A 303 REMARK 465 ALA A 304 REMARK 465 THR A 305 REMARK 465 LEU A 306 REMARK 465 ARG A 307 REMARK 465 CYS A 308 REMARK 465 LYS A 309 REMARK 465 ALA A 310 REMARK 465 ARG A 311 REMARK 465 PRO A 316 REMARK 465 ALA A 317 REMARK 465 ILE A 318 REMARK 465 HIS A 319 REMARK 465 TRP A 320 REMARK 465 ILE A 321 REMARK 465 SER A 322 REMARK 465 PRO A 323 REMARK 465 GLU A 324 REMARK 465 GLY A 325 REMARK 465 LYS A 326 REMARK 465 LEU A 327 REMARK 465 ILE A 328 REMARK 465 SER A 329 REMARK 465 ASN A 330 REMARK 465 ALA A 331 REMARK 465 THR A 332 REMARK 465 ARG A 333 REMARK 465 SER A 334 REMARK 465 LEU A 335 REMARK 465 VAL A 336 REMARK 465 TYR A 337 REMARK 465 ASP A 338 REMARK 465 ASN A 339 REMARK 465 GLY A 340 REMARK 465 THR A 341 REMARK 465 LEU A 342 REMARK 465 ASP A 343 REMARK 465 ILE A 344 REMARK 465 LEU A 345 REMARK 465 ILE A 346 REMARK 465 THR A 347 REMARK 465 THR A 348 REMARK 465 VAL A 349 REMARK 465 LYS A 350 REMARK 465 ASP A 351 REMARK 465 THR A 352 REMARK 465 GLY A 353 REMARK 465 ALA A 354 REMARK 465 PHE A 355 REMARK 465 THR A 356 REMARK 465 CYS A 357 REMARK 465 ILE A 358 REMARK 465 ALA A 359 REMARK 465 ALA A 366 REMARK 465 THR A 367 REMARK 465 GLN A 368 REMARK 465 ILE A 369 REMARK 465 VAL A 370 REMARK 465 ASP A 371 REMARK 465 LEU A 372 REMARK 465 HIS A 373 REMARK 465 ILE A 374 REMARK 465 ILE A 375 REMARK 465 ALA A 376 REMARK 465 ALA A 377 REMARK 465 ALA A 378 REMARK 465 HIS A 379 REMARK 465 HIS A 380 REMARK 465 HIS A 381 REMARK 465 HIS A 382 REMARK 465 HIS A 383 REMARK 465 HIS A 384 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN A 245 O HOH A 801 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 163 77.65 -67.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 944 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH A 945 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH A 946 DISTANCE = 7.38 ANGSTROMS REMARK 525 HOH A 947 DISTANCE = 7.75 ANGSTROMS REMARK 525 HOH A 948 DISTANCE = 8.01 ANGSTROMS REMARK 525 HOH A 949 DISTANCE = 8.62 ANGSTROMS REMARK 525 HOH A 950 DISTANCE = 8.76 ANGSTROMS REMARK 525 HOH A 951 DISTANCE = 9.52 ANGSTROMS REMARK 525 HOH A 952 DISTANCE = 10.18 ANGSTROMS REMARK 525 HOH A 953 DISTANCE = 11.13 ANGSTROMS REMARK 525 HOH A 954 DISTANCE = 11.50 ANGSTROMS REMARK 525 HOH A 955 DISTANCE = 12.65 ANGSTROMS REMARK 525 HOH A 956 DISTANCE = 14.05 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 705 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 205 O REMARK 620 2 HOH A 831 O 120.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 702 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 208 OE1 REMARK 620 2 PRO A 241 O 94.6 REMARK 620 3 SER A 265 OG 103.4 139.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 703 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 817 O REMARK 620 2 HOH A 854 O 66.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 704 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 883 O REMARK 620 2 HOH A 902 O 134.4 REMARK 620 N 1 DBREF 5XNQ A 18 375 UNP Q96NI6 LRFN5_HUMAN 18 375 SEQADV 5XNQ PRO A 14 UNP Q96NI6 EXPRESSION TAG SEQADV 5XNQ GLY A 15 UNP Q96NI6 EXPRESSION TAG SEQADV 5XNQ ASP A 16 UNP Q96NI6 EXPRESSION TAG SEQADV 5XNQ PRO A 17 UNP Q96NI6 EXPRESSION TAG SEQADV 5XNQ ALA A 376 UNP Q96NI6 EXPRESSION TAG SEQADV 5XNQ ALA A 377 UNP Q96NI6 EXPRESSION TAG SEQADV 5XNQ ALA A 378 UNP Q96NI6 EXPRESSION TAG SEQADV 5XNQ HIS A 379 UNP Q96NI6 EXPRESSION TAG SEQADV 5XNQ HIS A 380 UNP Q96NI6 EXPRESSION TAG SEQADV 5XNQ HIS A 381 UNP Q96NI6 EXPRESSION TAG SEQADV 5XNQ HIS A 382 UNP Q96NI6 EXPRESSION TAG SEQADV 5XNQ HIS A 383 UNP Q96NI6 EXPRESSION TAG SEQADV 5XNQ HIS A 384 UNP Q96NI6 EXPRESSION TAG SEQRES 1 A 371 PRO GLY ASP PRO GLN ILE CYS PRO LYS ARG CYS VAL CYS SEQRES 2 A 371 GLN ILE LEU SER PRO ASN LEU ALA THR LEU CYS ALA LYS SEQRES 3 A 371 LYS GLY LEU LEU PHE VAL PRO PRO ASN ILE ASP ARG ARG SEQRES 4 A 371 THR VAL GLU LEU ARG LEU ALA ASP ASN PHE VAL THR ASN SEQRES 5 A 371 ILE LYS ARG LYS ASP PHE ALA ASN MET THR SER LEU VAL SEQRES 6 A 371 ASP LEU THR LEU SER ARG ASN THR ILE SER PHE ILE THR SEQRES 7 A 371 PRO HIS ALA PHE ALA ASP LEU ARG ASN LEU ARG ALA LEU SEQRES 8 A 371 HIS LEU ASN SER ASN ARG LEU THR LYS ILE THR ASN ASP SEQRES 9 A 371 MET PHE SER GLY LEU SER ASN LEU HIS HIS LEU ILE LEU SEQRES 10 A 371 ASN ASN ASN GLN LEU THR LEU ILE SER SER THR ALA PHE SEQRES 11 A 371 ASP ASP VAL PHE ALA LEU GLU GLU LEU ASP LEU SER TYR SEQRES 12 A 371 ASN ASN LEU GLU THR ILE PRO TRP ASP ALA VAL GLU LYS SEQRES 13 A 371 MET VAL SER LEU HIS THR LEU SER LEU ASP HIS ASN MET SEQRES 14 A 371 ILE ASP ASN ILE PRO LYS GLY THR PHE SER HIS LEU HIS SEQRES 15 A 371 LYS MET THR ARG LEU ASP VAL THR SER ASN LYS LEU GLN SEQRES 16 A 371 LYS LEU PRO PRO ASP PRO LEU PHE GLN ARG ALA GLN VAL SEQRES 17 A 371 LEU ALA THR SER GLY ILE ILE SER PRO SER THR PHE ALA SEQRES 18 A 371 LEU SER PHE GLY GLY ASN PRO LEU HIS CYS ASN CYS GLU SEQRES 19 A 371 LEU LEU TRP LEU ARG ARG LEU SER ARG GLU ASP ASP LEU SEQRES 20 A 371 GLU THR CYS ALA SER PRO PRO LEU LEU THR GLY ARG TYR SEQRES 21 A 371 PHE TRP SER ILE PRO GLU GLU GLU PHE LEU CYS GLU PRO SEQRES 22 A 371 PRO LEU ILE THR ARG HIS THR HIS GLU MET ARG VAL LEU SEQRES 23 A 371 GLU GLY GLN ARG ALA THR LEU ARG CYS LYS ALA ARG GLY SEQRES 24 A 371 ASP PRO GLU PRO ALA ILE HIS TRP ILE SER PRO GLU GLY SEQRES 25 A 371 LYS LEU ILE SER ASN ALA THR ARG SER LEU VAL TYR ASP SEQRES 26 A 371 ASN GLY THR LEU ASP ILE LEU ILE THR THR VAL LYS ASP SEQRES 27 A 371 THR GLY ALA PHE THR CYS ILE ALA SER ASN PRO ALA GLY SEQRES 28 A 371 GLU ALA THR GLN ILE VAL ASP LEU HIS ILE ILE ALA ALA SEQRES 29 A 371 ALA HIS HIS HIS HIS HIS HIS HET NAG A 701 14 HET NA A 702 1 HET NA A 703 1 HET NA A 704 1 HET CA A 705 1 HET CA A 706 1 HET CA A 707 1 HET CA A 708 1 HET CL A 709 1 HET CL A 710 1 HET SO4 A 711 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM NA SODIUM ION HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 2 NAG C8 H15 N O6 FORMUL 3 NA 3(NA 1+) FORMUL 6 CA 4(CA 2+) FORMUL 10 CL 2(CL 1-) FORMUL 12 SO4 O4 S 2- FORMUL 13 HOH *156(H2 O) HELIX 1 AA1 PRO A 163 GLU A 168 1 6 HELIX 2 AA2 ASP A 213 ALA A 219 5 7 HELIX 3 AA3 ASN A 245 GLU A 247 5 3 HELIX 4 AA4 LEU A 248 LEU A 254 1 7 HELIX 5 AA5 PRO A 266 THR A 270 5 5 HELIX 6 AA6 TYR A 273 ILE A 277 5 5 HELIX 7 AA7 PRO A 278 PHE A 282 5 5 SHEET 1 AA110 VAL A 25 LEU A 29 0 SHEET 2 AA110 ASN A 32 LEU A 36 -1 O LEU A 36 N VAL A 25 SHEET 3 AA110 GLU A 55 ARG A 57 1 O GLU A 55 N THR A 35 SHEET 4 AA110 ASP A 79 THR A 81 1 O ASP A 79 N LEU A 56 SHEET 5 AA110 ALA A 103 HIS A 105 1 O HIS A 105 N LEU A 80 SHEET 6 AA110 HIS A 127 ILE A 129 1 O ILE A 129 N LEU A 104 SHEET 7 AA110 GLU A 151 ASP A 153 1 O ASP A 153 N LEU A 128 SHEET 8 AA110 THR A 175 SER A 177 1 O SER A 177 N LEU A 152 SHEET 9 AA110 ARG A 199 ASP A 201 1 O ARG A 199 N LEU A 176 SHEET 10 AA110 ALA A 234 SER A 236 1 O ALA A 234 N LEU A 200 SHEET 1 AA2 2 ASN A 65 ILE A 66 0 SHEET 2 AA2 2 PHE A 89 ILE A 90 1 O PHE A 89 N ILE A 66 SHEET 1 AA3 2 LYS A 113 ILE A 114 0 SHEET 2 AA3 2 LEU A 137 ILE A 138 1 O LEU A 137 N ILE A 114 SHEET 1 AA4 2 LEU A 242 HIS A 243 0 SHEET 2 AA4 2 CYS A 263 SER A 265 1 O ALA A 264 N LEU A 242 SSBOND 1 CYS A 20 CYS A 26 1555 1555 2.03 SSBOND 2 CYS A 24 CYS A 37 1555 1555 2.03 SSBOND 3 CYS A 244 CYS A 263 1555 1555 2.03 SSBOND 4 CYS A 246 CYS A 284 1555 1555 2.03 LINK ND2 ASN A 73 C1 NAG A 701 1555 1555 1.42 LINK O ASN A 205 CA CA A 705 1555 1555 3.09 LINK OE1 GLN A 208 NA NA A 702 1555 1555 2.51 LINK O PRO A 241 NA NA A 702 1555 1555 2.94 LINK OG SER A 265 NA NA A 702 1555 1555 2.84 LINK NA NA A 703 O HOH A 817 1555 12554 2.57 LINK NA NA A 703 O HOH A 854 1555 12554 2.58 LINK NA NA A 704 O HOH A 883 1555 1555 2.71 LINK NA NA A 704 O HOH A 902 1555 1555 2.82 LINK CA CA A 705 O HOH A 831 1555 12554 2.87 LINK CA CA A 707 O HOH A 919 1555 1555 2.53 LINK CA CA A 708 O HOH A 900 1555 1555 2.93 CISPEP 1 SER A 30 PRO A 31 0 -5.91 CISPEP 2 SER A 265 PRO A 266 0 1.30 CISPEP 3 ASP A 313 PRO A 314 0 -13.26 CRYST1 152.601 152.601 93.822 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006553 0.003783 0.000000 0.00000 SCALE2 0.000000 0.007567 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010658 0.00000