HEADER TRANSCRIPTION 04-JUN-17 5XPQ OBSLTE 10-APR-19 5XPQ 6JMI TITLE CRYSTAL STRUCTURE OF M.TUBERCULOSIS RV0081 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED HTH-TYPE TRANSCRIPTIONAL REGULATOR RV0081; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: ATCC 25618 / H37RV; SOURCE 5 GENE: RV0081; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET15B KEYWDS TRANSCRIPTION FACTOR, RV0081, HYPOXIA, TUBERCULOSIS, ARSR/SMTB, FHL KEYWDS 2 REGULATOR, REGULATORY HUB, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR A.KUMAR,S.PHULERA,C.S.MANDE REVDAT 2 10-APR-19 5XPQ 1 OBSLTE REVDAT 1 06-JUN-18 5XPQ 0 JRNL AUTH A.KUMAR,S.PHULERA,A.RIZVI,P.SONAWANE,S.BANNERJEE,C.S.MANDE JRNL TITL CRYSTAL STRUCTURE OF THE RV0081 PROTEIN FROM MYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS SUGGESTS A POTENTIAL MODE OF TRANSCRIPTIONAL JRNL TITL 3 REGULATION UNDER HYPOXIC CONDITION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 8676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.260 REMARK 3 FREE R VALUE : 0.298 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 868 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 5.9930 - 4.7584 1.00 1313 146 0.2560 0.3184 REMARK 3 2 4.7584 - 4.1574 1.00 1287 143 0.2268 0.2533 REMARK 3 3 4.1574 - 3.7775 1.00 1270 140 0.2517 0.3097 REMARK 3 4 3.7775 - 3.5069 1.00 1255 140 0.2838 0.3295 REMARK 3 5 3.5069 - 3.3002 1.00 1264 140 0.3221 0.3816 REMARK 3 6 3.3002 - 3.3000 0.99 1419 159 0.2471 0.2744 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 2631 REMARK 3 ANGLE : 0.398 3577 REMARK 3 CHIRALITY : 0.034 464 REMARK 3 PLANARITY : 0.003 451 REMARK 3 DIHEDRAL : 5.612 1611 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 155.0266 52.4762 350.6014 REMARK 3 T TENSOR REMARK 3 T11: 0.3055 T22: 0.5687 REMARK 3 T33: 0.3901 T12: -0.0493 REMARK 3 T13: 0.0195 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 2.7368 L22: 4.2592 REMARK 3 L33: 5.6144 L12: -0.4992 REMARK 3 L13: -0.7628 L23: 0.0719 REMARK 3 S TENSOR REMARK 3 S11: -0.0675 S12: 0.0956 S13: -0.4043 REMARK 3 S21: 0.0437 S22: 0.1858 S23: 0.0371 REMARK 3 S31: -0.0222 S32: 0.3979 S33: -0.1117 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 144.2432 58.1830 387.4824 REMARK 3 T TENSOR REMARK 3 T11: 0.3839 T22: 0.6431 REMARK 3 T33: 0.4839 T12: 0.0456 REMARK 3 T13: 0.0822 T23: -0.2025 REMARK 3 L TENSOR REMARK 3 L11: 3.4058 L22: 1.4999 REMARK 3 L33: 2.7399 L12: 0.9092 REMARK 3 L13: 1.6608 L23: -0.5925 REMARK 3 S TENSOR REMARK 3 S11: 0.1889 S12: -0.4869 S13: -0.0881 REMARK 3 S21: 0.1440 S22: -0.2152 S23: 0.2272 REMARK 3 S31: -0.0125 S32: -0.3217 S33: -0.0101 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 4 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 163.1379 54.6148 382.5749 REMARK 3 T TENSOR REMARK 3 T11: 0.4454 T22: 0.8434 REMARK 3 T33: 0.4381 T12: 0.1398 REMARK 3 T13: -0.0201 T23: -0.0872 REMARK 3 L TENSOR REMARK 3 L11: 4.6665 L22: 1.5937 REMARK 3 L33: 3.0404 L12: -1.4769 REMARK 3 L13: 1.0891 L23: -0.1792 REMARK 3 S TENSOR REMARK 3 S11: 0.0132 S12: 0.1660 S13: -0.2392 REMARK 3 S21: 0.2885 S22: 0.1760 S23: -0.1491 REMARK 3 S31: -0.1075 S32: 0.6688 S33: -0.1500 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 4 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 146.3422 66.7872 353.3604 REMARK 3 T TENSOR REMARK 3 T11: 0.7972 T22: 0.6640 REMARK 3 T33: 0.4728 T12: 0.2424 REMARK 3 T13: -0.2089 T23: -0.0445 REMARK 3 L TENSOR REMARK 3 L11: 2.6233 L22: 2.4424 REMARK 3 L33: 3.2562 L12: 0.8836 REMARK 3 L13: -1.8656 L23: 0.7604 REMARK 3 S TENSOR REMARK 3 S11: 0.0129 S12: 0.0676 S13: 0.2598 REMARK 3 S21: -0.4060 S22: -0.1401 S23: 0.3124 REMARK 3 S31: -1.0095 S32: -0.5178 S33: 0.0455 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XPQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1300003718. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8684 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 45.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1R1U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CH3COONA , (0.2-0.4) M REMARK 280 NH4(SO4)2, 25% W/VPEG 4000, PH 4.6, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 131.12500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.61500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.61500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.56250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.61500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.61500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 196.68750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.61500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.61500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 65.56250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.61500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.61500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 196.68750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 131.12500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -21 REMARK 465 SER A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 SER A -13 REMARK 465 SER A -12 REMARK 465 GLY A -11 REMARK 465 LEU A -10 REMARK 465 VAL A -9 REMARK 465 PRO A -8 REMARK 465 ARG A -7 REMARK 465 GLY A -6 REMARK 465 SER A -5 REMARK 465 HIS A -4 REMARK 465 MET A -3 REMARK 465 ALA A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 VAL A 1 REMARK 465 GLU A 2 REMARK 465 VAL A 103 REMARK 465 LEU A 104 REMARK 465 GLU A 105 REMARK 465 ASP A 106 REMARK 465 LEU A 107 REMARK 465 ARG A 108 REMARK 465 ALA A 109 REMARK 465 GLY A 110 REMARK 465 GLY A 111 REMARK 465 SER A 112 REMARK 465 ALA A 113 REMARK 465 THR A 114 REMARK 465 SER B -21 REMARK 465 SER B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 SER B -13 REMARK 465 SER B -12 REMARK 465 GLY B -11 REMARK 465 LEU B -10 REMARK 465 VAL B -9 REMARK 465 PRO B -8 REMARK 465 ARG B -7 REMARK 465 GLY B -6 REMARK 465 SER B -5 REMARK 465 HIS B -4 REMARK 465 MET B -3 REMARK 465 ALA B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 VAL B 1 REMARK 465 GLU B 2 REMARK 465 SER B 3 REMARK 465 SER B 41 REMARK 465 SER B 42 REMARK 465 ASP B 43 REMARK 465 VAL B 44 REMARK 465 GLY B 45 REMARK 465 SER B 49 REMARK 465 VAL B 103 REMARK 465 LEU B 104 REMARK 465 GLU B 105 REMARK 465 ASP B 106 REMARK 465 LEU B 107 REMARK 465 ARG B 108 REMARK 465 ALA B 109 REMARK 465 GLY B 110 REMARK 465 GLY B 111 REMARK 465 SER B 112 REMARK 465 ALA B 113 REMARK 465 THR B 114 REMARK 465 SER C -21 REMARK 465 SER C -20 REMARK 465 HIS C -19 REMARK 465 HIS C -18 REMARK 465 HIS C -17 REMARK 465 HIS C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 SER C -13 REMARK 465 SER C -12 REMARK 465 GLY C -11 REMARK 465 LEU C -10 REMARK 465 VAL C -9 REMARK 465 PRO C -8 REMARK 465 ARG C -7 REMARK 465 GLY C -6 REMARK 465 SER C -5 REMARK 465 HIS C -4 REMARK 465 MET C -3 REMARK 465 ALA C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 VAL C 1 REMARK 465 GLU C 2 REMARK 465 SER C 3 REMARK 465 GLY C 45 REMARK 465 LEU C 46 REMARK 465 GLU C 47 REMARK 465 SER C 48 REMARK 465 VAL C 103 REMARK 465 LEU C 104 REMARK 465 GLU C 105 REMARK 465 ASP C 106 REMARK 465 LEU C 107 REMARK 465 ARG C 108 REMARK 465 ALA C 109 REMARK 465 GLY C 110 REMARK 465 GLY C 111 REMARK 465 SER C 112 REMARK 465 ALA C 113 REMARK 465 THR C 114 REMARK 465 SER D -21 REMARK 465 SER D -20 REMARK 465 HIS D -19 REMARK 465 HIS D -18 REMARK 465 HIS D -17 REMARK 465 HIS D -16 REMARK 465 HIS D -15 REMARK 465 HIS D -14 REMARK 465 SER D -13 REMARK 465 SER D -12 REMARK 465 GLY D -11 REMARK 465 LEU D -10 REMARK 465 VAL D -9 REMARK 465 PRO D -8 REMARK 465 ARG D -7 REMARK 465 GLY D -6 REMARK 465 SER D -5 REMARK 465 HIS D -4 REMARK 465 MET D -3 REMARK 465 ALA D -2 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 VAL D 1 REMARK 465 GLU D 2 REMARK 465 SER D 3 REMARK 465 GLY D 37 REMARK 465 GLU D 38 REMARK 465 LEU D 39 REMARK 465 LEU D 40 REMARK 465 SER D 41 REMARK 465 SER D 42 REMARK 465 ASP D 43 REMARK 465 VAL D 44 REMARK 465 GLY D 45 REMARK 465 LEU D 46 REMARK 465 GLU D 47 REMARK 465 SER D 48 REMARK 465 SER D 49 REMARK 465 ALA D 66 REMARK 465 ARG D 67 REMARK 465 ARG D 68 REMARK 465 ASP D 69 REMARK 465 GLY D 70 REMARK 465 ASN D 71 REMARK 465 ALA D 72 REMARK 465 MET D 73 REMARK 465 ILE D 74 REMARK 465 ALA D 102 REMARK 465 VAL D 103 REMARK 465 LEU D 104 REMARK 465 GLU D 105 REMARK 465 ASP D 106 REMARK 465 LEU D 107 REMARK 465 ARG D 108 REMARK 465 ALA D 109 REMARK 465 GLY D 110 REMARK 465 GLY D 111 REMARK 465 SER D 112 REMARK 465 ALA D 113 REMARK 465 THR D 114 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 8 CG CD CE NZ REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 470 LYS A 15 CG CD CE NZ REMARK 470 ARG A 32 CG CD NE CZ NH1 NH2 REMARK 470 SER A 41 OG REMARK 470 SER A 42 OG REMARK 470 GLU A 47 CG CD OE1 OE2 REMARK 470 SER A 49 OG REMARK 470 SER A 52 OG REMARK 470 ARG A 68 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 69 CG OD1 OD2 REMARK 470 ASN A 71 CG OD1 ND2 REMARK 470 SER A 76 OG REMARK 470 ARG A 100 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 470 LYS B 8 CG CD CE NZ REMARK 470 ARG B 24 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 32 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 46 CG CD1 CD2 REMARK 470 GLU B 47 CG CD OE1 OE2 REMARK 470 ASN B 50 N CG OD1 ND2 REMARK 470 SER B 52 OG REMARK 470 GLN B 53 CG CD OE1 NE2 REMARK 470 ARG B 67 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 69 CG OD1 OD2 REMARK 470 SER B 76 OG REMARK 470 LYS B 91 CG CD CE NZ REMARK 470 SER B 98 OG REMARK 470 GLU C 4 CG CD OE1 OE2 REMARK 470 LYS C 8 CG CD CE NZ REMARK 470 LYS C 15 CG CD CE NZ REMARK 470 GLU C 31 CG CD OE1 OE2 REMARK 470 SER C 41 OG REMARK 470 SER C 42 OG REMARK 470 VAL C 44 CG1 CG2 REMARK 470 SER C 49 OG REMARK 470 ASN C 50 CG OD1 ND2 REMARK 470 SER C 52 OG REMARK 470 GLN C 53 CG CD OE1 NE2 REMARK 470 VAL C 57 CG1 CG2 REMARK 470 ARG C 59 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 67 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 68 CG CD NE CZ NH1 NH2 REMARK 470 ASP C 69 CG OD1 OD2 REMARK 470 SER C 76 OG REMARK 470 ARG C 90 CG CD NE CZ NH1 NH2 REMARK 470 SER C 98 OG REMARK 470 LYS D 8 CG CD CE NZ REMARK 470 ARG D 24 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 31 CG CD OE1 OE2 REMARK 470 ARG D 32 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 33 CG OD1 OD2 REMARK 470 ARG D 34 CG CD NE CZ NH1 NH2 REMARK 470 SER D 35 OG REMARK 470 VAL D 36 CG1 CG2 REMARK 470 ASN D 50 CG OD1 ND2 REMARK 470 SER D 52 OG REMARK 470 GLN D 53 CD OE1 NE2 REMARK 470 ARG D 59 CG CD NE CZ NH1 NH2 REMARK 470 VAL D 64 CG1 CG2 REMARK 470 GLU D 84 CG CD OE1 OE2 REMARK 470 LYS D 91 CG CD CE NZ REMARK 470 ASP D 99 CG OD1 OD2 REMARK 470 ARG D 100 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 18 53.23 -90.52 REMARK 500 SER A 41 65.98 -114.49 REMARK 500 SER A 42 -159.03 -137.02 REMARK 500 ASN A 71 -0.50 63.12 REMARK 500 ALA A 79 146.40 67.72 REMARK 500 ALA B 18 51.28 -91.72 REMARK 500 ASN B 71 -0.65 63.55 REMARK 500 ALA B 79 147.66 69.02 REMARK 500 ALA C 18 53.15 -90.87 REMARK 500 SER C 42 -133.66 -128.45 REMARK 500 ALA C 79 145.39 67.42 REMARK 500 ALA D 18 47.33 -92.58 REMARK 500 SER D 35 53.70 -150.01 REMARK 500 REMARK 500 REMARK: NULL DBREF 5XPQ A 2 114 UNP P9WMI7 Y0081_MYCTU 2 114 DBREF 5XPQ B 2 114 UNP P9WMI7 Y0081_MYCTU 2 114 DBREF 5XPQ C 2 114 UNP P9WMI7 Y0081_MYCTU 2 114 DBREF 5XPQ D 2 114 UNP P9WMI7 Y0081_MYCTU 2 114 SEQADV 5XPQ SER A -21 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER A -20 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS A -19 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS A -18 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS A -17 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS A -16 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS A -15 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS A -14 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER A -13 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER A -12 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ GLY A -11 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ LEU A -10 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ VAL A -9 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ PRO A -8 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ ARG A -7 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ GLY A -6 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER A -5 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS A -4 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ MET A -3 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ ALA A -2 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ GLY A -1 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER A 0 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ VAL A 1 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER B -21 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER B -20 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS B -19 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS B -18 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS B -17 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS B -16 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS B -15 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS B -14 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER B -13 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER B -12 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ GLY B -11 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ LEU B -10 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ VAL B -9 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ PRO B -8 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ ARG B -7 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ GLY B -6 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER B -5 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS B -4 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ MET B -3 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ ALA B -2 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ GLY B -1 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER B 0 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ VAL B 1 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER C -21 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER C -20 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS C -19 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS C -18 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS C -17 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS C -16 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS C -15 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS C -14 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER C -13 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER C -12 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ GLY C -11 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ LEU C -10 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ VAL C -9 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ PRO C -8 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ ARG C -7 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ GLY C -6 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER C -5 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS C -4 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ MET C -3 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ ALA C -2 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ GLY C -1 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER C 0 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ VAL C 1 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER D -21 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER D -20 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS D -19 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS D -18 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS D -17 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS D -16 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS D -15 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS D -14 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER D -13 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER D -12 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ GLY D -11 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ LEU D -10 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ VAL D -9 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ PRO D -8 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ ARG D -7 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ GLY D -6 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER D -5 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ HIS D -4 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ MET D -3 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ ALA D -2 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ GLY D -1 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ SER D 0 UNP P9WMI7 EXPRESSION TAG SEQADV 5XPQ VAL D 1 UNP P9WMI7 EXPRESSION TAG SEQRES 1 A 136 SER SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL SEQRES 2 A 136 PRO ARG GLY SER HIS MET ALA GLY SER VAL GLU SER GLU SEQRES 3 A 136 PRO LEU TYR LYS LEU LYS ALA GLU PHE PHE LYS THR LEU SEQRES 4 A 136 ALA HIS PRO ALA ARG ILE ARG ILE LEU GLU LEU LEU VAL SEQRES 5 A 136 GLU ARG ASP ARG SER VAL GLY GLU LEU LEU SER SER ASP SEQRES 6 A 136 VAL GLY LEU GLU SER SER ASN LEU SER GLN GLN LEU GLY SEQRES 7 A 136 VAL LEU ARG ARG ALA GLY VAL VAL ALA ALA ARG ARG ASP SEQRES 8 A 136 GLY ASN ALA MET ILE TYR SER ILE ALA ALA PRO ASP ILE SEQRES 9 A 136 ALA GLU LEU LEU ALA VAL ALA ARG LYS VAL LEU ALA ARG SEQRES 10 A 136 VAL LEU SER ASP ARG VAL ALA VAL LEU GLU ASP LEU ARG SEQRES 11 A 136 ALA GLY GLY SER ALA THR SEQRES 1 B 136 SER SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL SEQRES 2 B 136 PRO ARG GLY SER HIS MET ALA GLY SER VAL GLU SER GLU SEQRES 3 B 136 PRO LEU TYR LYS LEU LYS ALA GLU PHE PHE LYS THR LEU SEQRES 4 B 136 ALA HIS PRO ALA ARG ILE ARG ILE LEU GLU LEU LEU VAL SEQRES 5 B 136 GLU ARG ASP ARG SER VAL GLY GLU LEU LEU SER SER ASP SEQRES 6 B 136 VAL GLY LEU GLU SER SER ASN LEU SER GLN GLN LEU GLY SEQRES 7 B 136 VAL LEU ARG ARG ALA GLY VAL VAL ALA ALA ARG ARG ASP SEQRES 8 B 136 GLY ASN ALA MET ILE TYR SER ILE ALA ALA PRO ASP ILE SEQRES 9 B 136 ALA GLU LEU LEU ALA VAL ALA ARG LYS VAL LEU ALA ARG SEQRES 10 B 136 VAL LEU SER ASP ARG VAL ALA VAL LEU GLU ASP LEU ARG SEQRES 11 B 136 ALA GLY GLY SER ALA THR SEQRES 1 C 136 SER SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL SEQRES 2 C 136 PRO ARG GLY SER HIS MET ALA GLY SER VAL GLU SER GLU SEQRES 3 C 136 PRO LEU TYR LYS LEU LYS ALA GLU PHE PHE LYS THR LEU SEQRES 4 C 136 ALA HIS PRO ALA ARG ILE ARG ILE LEU GLU LEU LEU VAL SEQRES 5 C 136 GLU ARG ASP ARG SER VAL GLY GLU LEU LEU SER SER ASP SEQRES 6 C 136 VAL GLY LEU GLU SER SER ASN LEU SER GLN GLN LEU GLY SEQRES 7 C 136 VAL LEU ARG ARG ALA GLY VAL VAL ALA ALA ARG ARG ASP SEQRES 8 C 136 GLY ASN ALA MET ILE TYR SER ILE ALA ALA PRO ASP ILE SEQRES 9 C 136 ALA GLU LEU LEU ALA VAL ALA ARG LYS VAL LEU ALA ARG SEQRES 10 C 136 VAL LEU SER ASP ARG VAL ALA VAL LEU GLU ASP LEU ARG SEQRES 11 C 136 ALA GLY GLY SER ALA THR SEQRES 1 D 136 SER SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL SEQRES 2 D 136 PRO ARG GLY SER HIS MET ALA GLY SER VAL GLU SER GLU SEQRES 3 D 136 PRO LEU TYR LYS LEU LYS ALA GLU PHE PHE LYS THR LEU SEQRES 4 D 136 ALA HIS PRO ALA ARG ILE ARG ILE LEU GLU LEU LEU VAL SEQRES 5 D 136 GLU ARG ASP ARG SER VAL GLY GLU LEU LEU SER SER ASP SEQRES 6 D 136 VAL GLY LEU GLU SER SER ASN LEU SER GLN GLN LEU GLY SEQRES 7 D 136 VAL LEU ARG ARG ALA GLY VAL VAL ALA ALA ARG ARG ASP SEQRES 8 D 136 GLY ASN ALA MET ILE TYR SER ILE ALA ALA PRO ASP ILE SEQRES 9 D 136 ALA GLU LEU LEU ALA VAL ALA ARG LYS VAL LEU ALA ARG SEQRES 10 D 136 VAL LEU SER ASP ARG VAL ALA VAL LEU GLU ASP LEU ARG SEQRES 11 D 136 ALA GLY GLY SER ALA THR FORMUL 5 HOH *5(H2 O) HELIX 1 AA1 GLU A 4 LEU A 17 1 14 HELIX 2 AA2 HIS A 19 ARG A 32 1 14 HELIX 3 AA3 VAL A 36 SER A 41 1 6 HELIX 4 AA4 GLU A 47 ALA A 61 1 15 HELIX 5 AA5 PRO A 80 ALA A 102 1 23 HELIX 6 AA6 PRO B 5 LEU B 17 1 13 HELIX 7 AA7 HIS B 19 ARG B 32 1 14 HELIX 8 AA8 VAL B 36 LEU B 40 1 5 HELIX 9 AA9 LEU B 51 ALA B 61 1 11 HELIX 10 AB1 PRO B 80 ALA B 102 1 23 HELIX 11 AB2 PRO C 5 LEU C 17 1 13 HELIX 12 AB3 HIS C 19 ARG C 32 1 14 HELIX 13 AB4 VAL C 36 SER C 41 1 6 HELIX 14 AB5 ASN C 50 ALA C 61 1 12 HELIX 15 AB6 PRO C 80 ALA C 102 1 23 HELIX 16 AB7 PRO D 5 LEU D 17 1 13 HELIX 17 AB8 HIS D 19 ARG D 32 1 14 HELIX 18 AB9 LEU D 51 ALA D 61 1 11 HELIX 19 AC1 ALA D 79 VAL D 101 1 23 SHEET 1 AA1 3 ARG A 34 SER A 35 0 SHEET 2 AA1 3 MET A 73 ILE A 77 -1 O TYR A 75 N ARG A 34 SHEET 3 AA1 3 VAL A 64 ARG A 68 -1 N ARG A 67 O ILE A 74 SHEET 1 AA2 3 ARG B 34 SER B 35 0 SHEET 2 AA2 3 MET B 73 ILE B 77 -1 O TYR B 75 N ARG B 34 SHEET 3 AA2 3 VAL B 64 ARG B 68 -1 N ARG B 67 O ILE B 74 SHEET 1 AA3 3 ARG C 34 SER C 35 0 SHEET 2 AA3 3 MET C 73 ILE C 77 -1 O TYR C 75 N ARG C 34 SHEET 3 AA3 3 VAL C 64 ARG C 68 -1 N ALA C 65 O SER C 76 CRYST1 63.230 63.230 262.250 90.00 90.00 90.00 P 41 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015815 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015815 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003813 0.00000