data_5XQM # _entry.id 5XQM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5XQM WWPDB D_1300003946 BMRB 36096 # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'NMR solution structure of SMO1, Sumo homologue in Caenorhabditis elegans' _pdbx_database_related.db_id 36096 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5XQM _pdbx_database_status.recvd_initial_deposition_date 2017-06-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gowda, C.M.' 1 ? 'Surana, P.' 2 ? 'Das, R.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'PLoS ONE' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1932-6203 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first e0186622 _citation.page_last e0186622 _citation.title 'Structural and functional analysis of SMO-1, the SUMO homolog in Caenorhabditis elegans' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1371/journal.pone.0186622 _citation.pdbx_database_id_PubMed 29045470 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Surana, P.' 1 primary 'Gowda, C.M.' 2 primary 'Tripathi, V.' 3 primary 'Broday, L.' 4 primary 'Das, R.' 5 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Small ubiquitin-related modifier' _entity.formula_weight 11048.223 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'SUMO,Ubiquitin-like protein SMT3' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHMADDAAQAGDNAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDGRRINDDDTPKTL EMEDDDVIEVYQEQLGG ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHMADDAAQAGDNAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDGRRINDDDTPKTL EMEDDDVIEVYQEQLGG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 MET n 1 9 ALA n 1 10 ASP n 1 11 ASP n 1 12 ALA n 1 13 ALA n 1 14 GLN n 1 15 ALA n 1 16 GLY n 1 17 ASP n 1 18 ASN n 1 19 ALA n 1 20 GLU n 1 21 TYR n 1 22 ILE n 1 23 LYS n 1 24 ILE n 1 25 LYS n 1 26 VAL n 1 27 VAL n 1 28 GLY n 1 29 GLN n 1 30 ASP n 1 31 SER n 1 32 ASN n 1 33 GLU n 1 34 VAL n 1 35 HIS n 1 36 PHE n 1 37 ARG n 1 38 VAL n 1 39 LYS n 1 40 TYR n 1 41 GLY n 1 42 THR n 1 43 SER n 1 44 MET n 1 45 ALA n 1 46 LYS n 1 47 LEU n 1 48 LYS n 1 49 LYS n 1 50 SER n 1 51 TYR n 1 52 ALA n 1 53 ASP n 1 54 ARG n 1 55 THR n 1 56 GLY n 1 57 VAL n 1 58 ALA n 1 59 VAL n 1 60 ASN n 1 61 SER n 1 62 LEU n 1 63 ARG n 1 64 PHE n 1 65 LEU n 1 66 PHE n 1 67 ASP n 1 68 GLY n 1 69 ARG n 1 70 ARG n 1 71 ILE n 1 72 ASN n 1 73 ASP n 1 74 ASP n 1 75 ASP n 1 76 THR n 1 77 PRO n 1 78 LYS n 1 79 THR n 1 80 LEU n 1 81 GLU n 1 82 MET n 1 83 GLU n 1 84 ASP n 1 85 ASP n 1 86 ASP n 1 87 VAL n 1 88 ILE n 1 89 GLU n 1 90 VAL n 1 91 TYR n 1 92 GLN n 1 93 GLU n 1 94 GLN n 1 95 LEU n 1 96 GLY n 1 97 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 97 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'smo-1, smt3, sumo, K12C11.2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caenorhabditis elegans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SUMO_CAEEL _struct_ref.pdbx_db_accession P55853 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MADDAAQAGDNAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDGRRINDDDTPKTLEMEDDDV IEVYQEQLGG ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5XQM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 97 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P55853 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 90 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 90 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5XQM MET A 1 ? UNP P55853 ? ? 'expression tag' -6 1 1 5XQM HIS A 2 ? UNP P55853 ? ? 'expression tag' -5 2 1 5XQM HIS A 3 ? UNP P55853 ? ? 'expression tag' -4 3 1 5XQM HIS A 4 ? UNP P55853 ? ? 'expression tag' -3 4 1 5XQM HIS A 5 ? UNP P55853 ? ? 'expression tag' -2 5 1 5XQM HIS A 6 ? UNP P55853 ? ? 'expression tag' -1 6 1 5XQM HIS A 7 ? UNP P55853 ? ? 'expression tag' 0 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '3D HNCO' 1 isotropic 3 1 1 '3D HNCA' 1 isotropic 4 1 1 '3D HNCACB' 1 isotropic 5 1 1 '3D CBCA(CO)NH' 1 isotropic 6 1 1 '3D HN(CO)CA' 1 isotropic 7 1 1 '3D C(CO)NH' 1 isotropic 8 1 1 '3D H(CCO)NH' 1 isotropic 9 1 1 '3D 1H-15N NOESY' 1 isotropic 10 1 1 '3D 1H-13C NOESY aliphatic' 1 isotropic 11 1 1 '3D 1H-13C NOESY aromatic' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 150 _pdbx_nmr_exptl_sample_conditions.details '25mM Phosphate buffer pH6.0, 150mM NaCl' _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label condition_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '620 uM [U-13C; U-15N] SMO1, Small Ubiquitin like modifier in C. elegans, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 15N-13C_sample _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AvanceIII _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 5XQM _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;WATER REFINEMENT PERFORMED USING PONDEROSA-C/S PACKAGE. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 5XQM _pdbx_nmr_ensemble.conformers_calculated_total_number 400 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' # _pdbx_nmr_representative.entry_id 5XQM _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'target function' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement CYANA ? 'GUNTERT, MUMENTHALER AND WUTHRICH' 1 'structure solution' CYANA ? ? 2 'structure solution' SPARKY ? ? 3 'structure solution' TOPSPIN ? ? 4 'structure solution' NMRPIPE ? ? 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5XQM _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5XQM _struct.title 'NMR solution structure of SMO1, Sumo homologue in Caenorhabditis elegans' _struct.pdbx_descriptor 'Small ubiquitin-related modifier' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5XQM _struct_keywords.text 'solution structure, Caenorhabditis elegans, Sumo homologue, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 43 ? GLY A 56 ? SER A 36 GLY A 49 1 ? 14 HELX_P HELX_P2 AA2 ALA A 58 ? LEU A 62 ? ALA A 51 LEU A 55 5 ? 5 HELX_P HELX_P3 AA3 THR A 76 ? GLU A 81 ? THR A 69 GLU A 74 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 33 ? VAL A 38 ? GLU A 26 VAL A 31 AA1 2 ILE A 22 ? VAL A 27 ? ILE A 15 VAL A 20 AA1 3 ASP A 86 ? TYR A 91 ? ASP A 79 TYR A 84 AA1 4 ARG A 63 ? PHE A 66 ? ARG A 56 PHE A 59 AA1 5 ARG A 69 ? ARG A 70 ? ARG A 62 ARG A 63 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 38 ? O VAL A 31 N ILE A 22 ? N ILE A 15 AA1 2 3 N LYS A 25 ? N LYS A 18 O ASP A 86 ? O ASP A 79 AA1 3 4 O GLU A 89 ? O GLU A 82 N LEU A 65 ? N LEU A 58 AA1 4 5 N PHE A 66 ? N PHE A 59 O ARG A 69 ? O ARG A 62 # _atom_sites.entry_id 5XQM _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -6 ? ? ? A . n A 1 2 HIS 2 -5 ? ? ? A . n A 1 3 HIS 3 -4 ? ? ? A . n A 1 4 HIS 4 -3 ? ? ? A . n A 1 5 HIS 5 -2 ? ? ? A . n A 1 6 HIS 6 -1 ? ? ? A . n A 1 7 HIS 7 0 ? ? ? A . n A 1 8 MET 8 1 1 MET MET A . n A 1 9 ALA 9 2 2 ALA ALA A . n A 1 10 ASP 10 3 3 ASP ASP A . n A 1 11 ASP 11 4 4 ASP ASP A . n A 1 12 ALA 12 5 5 ALA ALA A . n A 1 13 ALA 13 6 6 ALA ALA A . n A 1 14 GLN 14 7 7 GLN GLN A . n A 1 15 ALA 15 8 8 ALA ALA A . n A 1 16 GLY 16 9 9 GLY GLY A . n A 1 17 ASP 17 10 10 ASP ASP A . n A 1 18 ASN 18 11 11 ASN ASN A . n A 1 19 ALA 19 12 12 ALA ALA A . n A 1 20 GLU 20 13 13 GLU GLU A . n A 1 21 TYR 21 14 14 TYR TYR A . n A 1 22 ILE 22 15 15 ILE ILE A . n A 1 23 LYS 23 16 16 LYS LYS A . n A 1 24 ILE 24 17 17 ILE ILE A . n A 1 25 LYS 25 18 18 LYS LYS A . n A 1 26 VAL 26 19 19 VAL VAL A . n A 1 27 VAL 27 20 20 VAL VAL A . n A 1 28 GLY 28 21 21 GLY GLY A . n A 1 29 GLN 29 22 22 GLN GLN A . n A 1 30 ASP 30 23 23 ASP ASP A . n A 1 31 SER 31 24 24 SER SER A . n A 1 32 ASN 32 25 25 ASN ASN A . n A 1 33 GLU 33 26 26 GLU GLU A . n A 1 34 VAL 34 27 27 VAL VAL A . n A 1 35 HIS 35 28 28 HIS HIS A . n A 1 36 PHE 36 29 29 PHE PHE A . n A 1 37 ARG 37 30 30 ARG ARG A . n A 1 38 VAL 38 31 31 VAL VAL A . n A 1 39 LYS 39 32 32 LYS LYS A . n A 1 40 TYR 40 33 33 TYR TYR A . n A 1 41 GLY 41 34 34 GLY GLY A . n A 1 42 THR 42 35 35 THR THR A . n A 1 43 SER 43 36 36 SER SER A . n A 1 44 MET 44 37 37 MET MET A . n A 1 45 ALA 45 38 38 ALA ALA A . n A 1 46 LYS 46 39 39 LYS LYS A . n A 1 47 LEU 47 40 40 LEU LEU A . n A 1 48 LYS 48 41 41 LYS LYS A . n A 1 49 LYS 49 42 42 LYS LYS A . n A 1 50 SER 50 43 43 SER SER A . n A 1 51 TYR 51 44 44 TYR TYR A . n A 1 52 ALA 52 45 45 ALA ALA A . n A 1 53 ASP 53 46 46 ASP ASP A . n A 1 54 ARG 54 47 47 ARG ARG A . n A 1 55 THR 55 48 48 THR THR A . n A 1 56 GLY 56 49 49 GLY GLY A . n A 1 57 VAL 57 50 50 VAL VAL A . n A 1 58 ALA 58 51 51 ALA ALA A . n A 1 59 VAL 59 52 52 VAL VAL A . n A 1 60 ASN 60 53 53 ASN ASN A . n A 1 61 SER 61 54 54 SER SER A . n A 1 62 LEU 62 55 55 LEU LEU A . n A 1 63 ARG 63 56 56 ARG ARG A . n A 1 64 PHE 64 57 57 PHE PHE A . n A 1 65 LEU 65 58 58 LEU LEU A . n A 1 66 PHE 66 59 59 PHE PHE A . n A 1 67 ASP 67 60 60 ASP ASP A . n A 1 68 GLY 68 61 61 GLY GLY A . n A 1 69 ARG 69 62 62 ARG ARG A . n A 1 70 ARG 70 63 63 ARG ARG A . n A 1 71 ILE 71 64 64 ILE ILE A . n A 1 72 ASN 72 65 65 ASN ASN A . n A 1 73 ASP 73 66 66 ASP ASP A . n A 1 74 ASP 74 67 67 ASP ASP A . n A 1 75 ASP 75 68 68 ASP ASP A . n A 1 76 THR 76 69 69 THR THR A . n A 1 77 PRO 77 70 70 PRO PRO A . n A 1 78 LYS 78 71 71 LYS LYS A . n A 1 79 THR 79 72 72 THR THR A . n A 1 80 LEU 80 73 73 LEU LEU A . n A 1 81 GLU 81 74 74 GLU GLU A . n A 1 82 MET 82 75 75 MET MET A . n A 1 83 GLU 83 76 76 GLU GLU A . n A 1 84 ASP 84 77 77 ASP ASP A . n A 1 85 ASP 85 78 78 ASP ASP A . n A 1 86 ASP 86 79 79 ASP ASP A . n A 1 87 VAL 87 80 80 VAL VAL A . n A 1 88 ILE 88 81 81 ILE ILE A . n A 1 89 GLU 89 82 82 GLU GLU A . n A 1 90 VAL 90 83 83 VAL VAL A . n A 1 91 TYR 91 84 84 TYR TYR A . n A 1 92 GLN 92 85 85 GLN GLN A . n A 1 93 GLU 93 86 86 GLU GLU A . n A 1 94 GLN 94 87 87 GLN GLN A . n A 1 95 LEU 95 88 88 LEU LEU A . n A 1 96 GLY 96 89 89 GLY GLY A . n A 1 97 GLY 97 90 90 GLY GLY A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 5850 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component 'SMO1, Small Ubiquitin like modifier in C. elegans' _pdbx_nmr_exptl_sample.concentration 620 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units uM _pdbx_nmr_exptl_sample.isotopic_labeling '[U-13C; U-15N]' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H A ILE 15 ? ? O A VAL 31 ? ? 1.57 2 2 H A ILE 15 ? ? O A VAL 31 ? ? 1.57 3 4 HH12 A ARG 62 ? ? OD2 A ASP 68 ? ? 1.56 4 5 H A ILE 15 ? ? O A VAL 31 ? ? 1.56 5 11 H A ILE 15 ? ? O A VAL 31 ? ? 1.58 6 15 O A LYS 39 ? ? HG A SER 43 ? ? 1.56 7 15 OD1 A ASP 10 ? ? HH22 A ARG 30 ? ? 1.59 8 17 OD2 A ASP 4 ? ? HZ1 A LYS 32 ? ? 1.57 9 20 HH12 A ARG 62 ? ? OD2 A ASP 68 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 6 ? ? 66.91 126.29 2 1 ALA A 12 ? ? -165.84 -74.41 3 1 ASP A 23 ? ? -69.85 1.60 4 1 GLU A 74 ? ? 38.08 34.27 5 2 ASP A 23 ? ? -79.29 22.19 6 2 ASP A 78 ? ? 70.65 33.91 7 2 GLU A 86 ? ? -94.30 -155.79 8 4 ASP A 78 ? ? 74.90 33.20 9 5 ALA A 6 ? ? 61.43 67.42 10 5 GLN A 7 ? ? 59.35 -161.86 11 5 ALA A 12 ? ? -153.11 -49.16 12 6 ASP A 23 ? ? -69.86 4.17 13 7 ALA A 5 ? ? 62.79 74.21 14 7 GLN A 7 ? ? 58.47 -176.39 15 7 ASP A 78 ? ? 71.27 33.54 16 8 ASP A 3 ? ? 67.01 -179.75 17 8 ASN A 11 ? ? -171.34 42.26 18 8 GLU A 13 ? ? 70.40 35.67 19 9 GLN A 7 ? ? 68.20 125.14 20 9 ASP A 78 ? ? 73.27 34.32 21 10 ALA A 5 ? ? -170.76 -30.99 22 10 ASP A 78 ? ? 71.24 34.68 23 10 GLN A 87 ? ? 177.33 -29.41 24 10 LEU A 88 ? ? 178.44 -37.60 25 11 ALA A 5 ? ? 77.63 -71.96 26 11 ASP A 60 ? ? 56.53 19.84 27 11 GLU A 74 ? ? 36.35 36.52 28 11 ASP A 78 ? ? 71.01 32.45 29 12 GLN A 7 ? ? 54.34 -159.20 30 12 ALA A 12 ? ? -79.68 -70.39 31 12 GLU A 13 ? ? -174.20 -55.36 32 14 GLN A 7 ? ? 56.90 -172.09 33 14 ASP A 23 ? ? -69.33 5.41 34 14 ASP A 66 ? ? -58.38 -9.75 35 15 GLN A 7 ? ? 57.46 102.91 36 15 ALA A 12 ? ? 67.17 178.69 37 15 ASP A 60 ? ? 58.71 18.70 38 16 ALA A 5 ? ? 77.72 -24.87 39 16 ALA A 6 ? ? 54.95 84.53 40 16 GLN A 7 ? ? 61.49 -171.12 41 16 ALA A 12 ? ? 56.90 -160.41 42 16 ASP A 23 ? ? -79.63 21.84 43 17 ALA A 5 ? ? 74.21 -52.66 44 17 ASP A 10 ? ? 66.74 -54.80 45 17 ASP A 78 ? ? 74.19 34.28 46 18 ASN A 11 ? ? -143.12 20.98 47 18 GLU A 13 ? ? -115.37 60.34 48 18 GLU A 74 ? ? 76.26 65.62 49 18 MET A 75 ? ? -39.58 -179.31 50 18 ASP A 77 ? ? -35.34 99.76 51 18 ASP A 78 ? ? 82.42 33.23 52 19 GLN A 7 ? ? 53.53 87.65 53 19 GLU A 13 ? ? -95.31 47.91 54 19 GLU A 86 ? ? 176.04 114.65 55 19 GLN A 87 ? ? -157.18 13.35 56 19 LEU A 88 ? ? 90.44 -7.21 57 20 GLU A 74 ? ? 76.23 66.04 58 20 MET A 75 ? ? -39.84 -179.32 59 20 ASP A 77 ? ? -25.67 97.74 60 20 ASP A 78 ? ? 80.23 33.04 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -6 ? A MET 1 2 1 Y 1 A HIS -5 ? A HIS 2 3 1 Y 1 A HIS -4 ? A HIS 3 4 1 Y 1 A HIS -3 ? A HIS 4 5 1 Y 1 A HIS -2 ? A HIS 5 6 1 Y 1 A HIS -1 ? A HIS 6 7 1 Y 1 A HIS 0 ? A HIS 7 8 2 Y 1 A MET -6 ? A MET 1 9 2 Y 1 A HIS -5 ? A HIS 2 10 2 Y 1 A HIS -4 ? A HIS 3 11 2 Y 1 A HIS -3 ? A HIS 4 12 2 Y 1 A HIS -2 ? A HIS 5 13 2 Y 1 A HIS -1 ? A HIS 6 14 2 Y 1 A HIS 0 ? A HIS 7 15 3 Y 1 A MET -6 ? A MET 1 16 3 Y 1 A HIS -5 ? A HIS 2 17 3 Y 1 A HIS -4 ? A HIS 3 18 3 Y 1 A HIS -3 ? A HIS 4 19 3 Y 1 A HIS -2 ? A HIS 5 20 3 Y 1 A HIS -1 ? A HIS 6 21 3 Y 1 A HIS 0 ? A HIS 7 22 4 Y 1 A MET -6 ? A MET 1 23 4 Y 1 A HIS -5 ? A HIS 2 24 4 Y 1 A HIS -4 ? A HIS 3 25 4 Y 1 A HIS -3 ? A HIS 4 26 4 Y 1 A HIS -2 ? A HIS 5 27 4 Y 1 A HIS -1 ? A HIS 6 28 4 Y 1 A HIS 0 ? A HIS 7 29 5 Y 1 A MET -6 ? A MET 1 30 5 Y 1 A HIS -5 ? A HIS 2 31 5 Y 1 A HIS -4 ? A HIS 3 32 5 Y 1 A HIS -3 ? A HIS 4 33 5 Y 1 A HIS -2 ? A HIS 5 34 5 Y 1 A HIS -1 ? A HIS 6 35 5 Y 1 A HIS 0 ? A HIS 7 36 6 Y 1 A MET -6 ? A MET 1 37 6 Y 1 A HIS -5 ? A HIS 2 38 6 Y 1 A HIS -4 ? A HIS 3 39 6 Y 1 A HIS -3 ? A HIS 4 40 6 Y 1 A HIS -2 ? A HIS 5 41 6 Y 1 A HIS -1 ? A HIS 6 42 6 Y 1 A HIS 0 ? A HIS 7 43 7 Y 1 A MET -6 ? A MET 1 44 7 Y 1 A HIS -5 ? A HIS 2 45 7 Y 1 A HIS -4 ? A HIS 3 46 7 Y 1 A HIS -3 ? A HIS 4 47 7 Y 1 A HIS -2 ? A HIS 5 48 7 Y 1 A HIS -1 ? A HIS 6 49 7 Y 1 A HIS 0 ? A HIS 7 50 8 Y 1 A MET -6 ? A MET 1 51 8 Y 1 A HIS -5 ? A HIS 2 52 8 Y 1 A HIS -4 ? A HIS 3 53 8 Y 1 A HIS -3 ? A HIS 4 54 8 Y 1 A HIS -2 ? A HIS 5 55 8 Y 1 A HIS -1 ? A HIS 6 56 8 Y 1 A HIS 0 ? A HIS 7 57 9 Y 1 A MET -6 ? A MET 1 58 9 Y 1 A HIS -5 ? A HIS 2 59 9 Y 1 A HIS -4 ? A HIS 3 60 9 Y 1 A HIS -3 ? A HIS 4 61 9 Y 1 A HIS -2 ? A HIS 5 62 9 Y 1 A HIS -1 ? A HIS 6 63 9 Y 1 A HIS 0 ? A HIS 7 64 10 Y 1 A MET -6 ? A MET 1 65 10 Y 1 A HIS -5 ? A HIS 2 66 10 Y 1 A HIS -4 ? A HIS 3 67 10 Y 1 A HIS -3 ? A HIS 4 68 10 Y 1 A HIS -2 ? A HIS 5 69 10 Y 1 A HIS -1 ? A HIS 6 70 10 Y 1 A HIS 0 ? A HIS 7 71 11 Y 1 A MET -6 ? A MET 1 72 11 Y 1 A HIS -5 ? A HIS 2 73 11 Y 1 A HIS -4 ? A HIS 3 74 11 Y 1 A HIS -3 ? A HIS 4 75 11 Y 1 A HIS -2 ? A HIS 5 76 11 Y 1 A HIS -1 ? A HIS 6 77 11 Y 1 A HIS 0 ? A HIS 7 78 12 Y 1 A MET -6 ? A MET 1 79 12 Y 1 A HIS -5 ? A HIS 2 80 12 Y 1 A HIS -4 ? A HIS 3 81 12 Y 1 A HIS -3 ? A HIS 4 82 12 Y 1 A HIS -2 ? A HIS 5 83 12 Y 1 A HIS -1 ? A HIS 6 84 12 Y 1 A HIS 0 ? A HIS 7 85 13 Y 1 A MET -6 ? A MET 1 86 13 Y 1 A HIS -5 ? A HIS 2 87 13 Y 1 A HIS -4 ? A HIS 3 88 13 Y 1 A HIS -3 ? A HIS 4 89 13 Y 1 A HIS -2 ? A HIS 5 90 13 Y 1 A HIS -1 ? A HIS 6 91 13 Y 1 A HIS 0 ? A HIS 7 92 14 Y 1 A MET -6 ? A MET 1 93 14 Y 1 A HIS -5 ? A HIS 2 94 14 Y 1 A HIS -4 ? A HIS 3 95 14 Y 1 A HIS -3 ? A HIS 4 96 14 Y 1 A HIS -2 ? A HIS 5 97 14 Y 1 A HIS -1 ? A HIS 6 98 14 Y 1 A HIS 0 ? A HIS 7 99 15 Y 1 A MET -6 ? A MET 1 100 15 Y 1 A HIS -5 ? A HIS 2 101 15 Y 1 A HIS -4 ? A HIS 3 102 15 Y 1 A HIS -3 ? A HIS 4 103 15 Y 1 A HIS -2 ? A HIS 5 104 15 Y 1 A HIS -1 ? A HIS 6 105 15 Y 1 A HIS 0 ? A HIS 7 106 16 Y 1 A MET -6 ? A MET 1 107 16 Y 1 A HIS -5 ? A HIS 2 108 16 Y 1 A HIS -4 ? A HIS 3 109 16 Y 1 A HIS -3 ? A HIS 4 110 16 Y 1 A HIS -2 ? A HIS 5 111 16 Y 1 A HIS -1 ? A HIS 6 112 16 Y 1 A HIS 0 ? A HIS 7 113 17 Y 1 A MET -6 ? A MET 1 114 17 Y 1 A HIS -5 ? A HIS 2 115 17 Y 1 A HIS -4 ? A HIS 3 116 17 Y 1 A HIS -3 ? A HIS 4 117 17 Y 1 A HIS -2 ? A HIS 5 118 17 Y 1 A HIS -1 ? A HIS 6 119 17 Y 1 A HIS 0 ? A HIS 7 120 18 Y 1 A MET -6 ? A MET 1 121 18 Y 1 A HIS -5 ? A HIS 2 122 18 Y 1 A HIS -4 ? A HIS 3 123 18 Y 1 A HIS -3 ? A HIS 4 124 18 Y 1 A HIS -2 ? A HIS 5 125 18 Y 1 A HIS -1 ? A HIS 6 126 18 Y 1 A HIS 0 ? A HIS 7 127 19 Y 1 A MET -6 ? A MET 1 128 19 Y 1 A HIS -5 ? A HIS 2 129 19 Y 1 A HIS -4 ? A HIS 3 130 19 Y 1 A HIS -3 ? A HIS 4 131 19 Y 1 A HIS -2 ? A HIS 5 132 19 Y 1 A HIS -1 ? A HIS 6 133 19 Y 1 A HIS 0 ? A HIS 7 134 20 Y 1 A MET -6 ? A MET 1 135 20 Y 1 A HIS -5 ? A HIS 2 136 20 Y 1 A HIS -4 ? A HIS 3 137 20 Y 1 A HIS -3 ? A HIS 4 138 20 Y 1 A HIS -2 ? A HIS 5 139 20 Y 1 A HIS -1 ? A HIS 6 140 20 Y 1 A HIS 0 ? A HIS 7 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #