HEADER SIGNALING PROTEIN/TRANSFERASE 07-JUN-17 5XQZ TITLE STRUCTURE OF THE MOB1-NDR2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOB KINASE ACTIVATOR 1A; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 33-216; COMPND 5 SYNONYM: MOB1 ALPHA,MOB1A,MOB1 HOMOLOG 1B,MPS ONE BINDER KINASE COMPND 6 ACTIVATOR-LIKE 1B; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SERINE/THREONINE-PROTEIN KINASE 38-LIKE; COMPND 10 CHAIN: C, D; COMPND 11 FRAGMENT: UNP RESIDUES 25-87; COMPND 12 SYNONYM: NDR2 PROTEIN KINASE,NUCLEAR DBF2-RELATED KINASE 2; COMPND 13 EC: 2.7.11.1; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MOB1A, C2ORF6, MOB4B, MOBK1B, MOBKL1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: STK38L, KIAA0965, NDR2; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SIGNALING PROTEIN-TRANSFERASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.WU,K.LIN REVDAT 2 27-MAR-24 5XQZ 1 REMARK REVDAT 1 29-AUG-18 5XQZ 0 JRNL AUTH Y.KULABEROGLU,K.LIN,M.HOLDER,Z.GAI,M.GOMEZ,B.ASSEFA SHIFA, JRNL AUTH 2 M.MAVIS,L.HOA,A.A.D.SHARIF,C.LUJAN,E.S.J.SMITH,I.BJEDOV, JRNL AUTH 3 N.TAPON,G.WU,A.HERGOVICH JRNL TITL STABLE MOB1 INTERACTION WITH HIPPO/MST IS NOT ESSENTIAL FOR JRNL TITL 2 DEVELOPMENT AND TISSUE GROWTH CONTROL. JRNL REF NAT COMMUN V. 8 695 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28947795 JRNL DOI 10.1038/S41467-017-00795-Y REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 31004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1665 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1877 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.1700 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4147 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 248 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.23000 REMARK 3 B22 (A**2) : -0.91000 REMARK 3 B33 (A**2) : 0.68000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.198 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.748 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4254 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2971 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5723 ; 1.550 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7212 ; 3.845 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 499 ; 4.736 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 220 ;37.320 ;24.045 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 782 ;20.766 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;20.329 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 615 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4652 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 889 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7225 ; 5.174 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 75 ;44.204 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 7311 ;17.200 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 2 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 33 211 B 33 211 6406 0.16 0.05 REMARK 3 2 C 21 84 D 21 84 2469 0.23 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5XQZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1300004000. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32723 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, HEPES, MAGNESIUM CHLORIDE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.75950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.10000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.21200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.10000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.75950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.21200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 24 REMARK 465 ALA A 25 REMARK 465 HIS A 26 REMARK 465 HIS A 27 REMARK 465 SER A 28 REMARK 465 SER A 29 REMARK 465 GLY A 30 REMARK 465 HIS A 31 REMARK 465 MET A 32 REMARK 465 GLY A 100 REMARK 465 THR A 101 REMARK 465 SER A 213 REMARK 465 LYS A 214 REMARK 465 ASP A 215 REMARK 465 ARG A 216 REMARK 465 SER C 20 REMARK 465 GLY C 86 REMARK 465 LEU C 87 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 102 CG OD1 ND2 REMARK 470 ILE A 103 CG1 CG2 CD1 REMARK 470 LYS A 104 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 51 O HOH B 1101 1.82 REMARK 500 O ALA B 25 O HOH B 1102 2.05 REMARK 500 OE1 GLU D 50 O HOH D 101 2.07 REMARK 500 O HIS C 23 CG2 THR C 27 2.08 REMARK 500 O GLY B 212 NH1 ARG B 216 2.09 REMARK 500 O HOH B 1172 O HOH D 108 2.13 REMARK 500 OG SER D 20 O HOH D 102 2.15 REMARK 500 O HOH B 1166 O HOH D 102 2.16 REMARK 500 OE1 GLU B 129 O HOH B 1103 2.16 REMARK 500 NE ARG D 67 O HOH D 101 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN D 34 O HOH C 216 2355 2.04 REMARK 500 OD1 ASN D 30 O HOH C 216 2355 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 79 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG C 84 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG B 92 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG B 92 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 132 79.04 -119.31 REMARK 500 SER B 29 138.68 123.92 REMARK 500 THR B 101 -74.93 -138.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1173 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH C 228 DISTANCE = 6.89 ANGSTROMS REMARK 525 HOH B1205 DISTANCE = 8.86 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 79 SG REMARK 620 2 CYS A 84 SG 118.8 REMARK 620 3 HIS A 161 NE2 113.7 103.1 REMARK 620 4 HIS A 166 NE2 117.6 101.9 98.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 79 SG REMARK 620 2 CYS B 84 SG 118.3 REMARK 620 3 HIS B 161 NE2 111.3 108.5 REMARK 620 4 HIS B 166 NE2 109.3 104.0 104.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 1002 DBREF 5XQZ A 33 216 UNP Q9H8S9 MOB1A_HUMAN 33 216 DBREF 5XQZ C 25 87 UNP Q9Y2H1 ST38L_HUMAN 25 87 DBREF 5XQZ B 33 216 UNP Q9H8S9 MOB1A_HUMAN 33 216 DBREF 5XQZ D 25 87 UNP Q9Y2H1 ST38L_HUMAN 25 87 SEQADV 5XQZ ALA A 24 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ ALA A 25 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ HIS A 26 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ HIS A 27 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ SER A 28 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ SER A 29 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ GLY A 30 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ HIS A 31 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ MET A 32 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ SER C 20 UNP Q9Y2H1 EXPRESSION TAG SEQADV 5XQZ SER C 21 UNP Q9Y2H1 EXPRESSION TAG SEQADV 5XQZ GLY C 22 UNP Q9Y2H1 EXPRESSION TAG SEQADV 5XQZ HIS C 23 UNP Q9Y2H1 EXPRESSION TAG SEQADV 5XQZ MET C 24 UNP Q9Y2H1 EXPRESSION TAG SEQADV 5XQZ ALA B 24 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ ALA B 25 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ HIS B 26 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ HIS B 27 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ SER B 28 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ SER B 29 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ GLY B 30 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ HIS B 31 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ MET B 32 UNP Q9H8S9 EXPRESSION TAG SEQADV 5XQZ SER D 20 UNP Q9Y2H1 EXPRESSION TAG SEQADV 5XQZ SER D 21 UNP Q9Y2H1 EXPRESSION TAG SEQADV 5XQZ GLY D 22 UNP Q9Y2H1 EXPRESSION TAG SEQADV 5XQZ HIS D 23 UNP Q9Y2H1 EXPRESSION TAG SEQADV 5XQZ MET D 24 UNP Q9Y2H1 EXPRESSION TAG SEQRES 1 A 193 ALA ALA HIS HIS SER SER GLY HIS MET GLU ALA THR LEU SEQRES 2 A 193 GLY SER GLY ASN LEU ARG GLN ALA VAL MET LEU PRO GLU SEQRES 3 A 193 GLY GLU ASP LEU ASN GLU TRP ILE ALA VAL ASN THR VAL SEQRES 4 A 193 ASP PHE PHE ASN GLN ILE ASN MET LEU TYR GLY THR ILE SEQRES 5 A 193 THR GLU PHE CYS THR GLU ALA SER CYS PRO VAL MET SER SEQRES 6 A 193 ALA GLY PRO ARG TYR GLU TYR HIS TRP ALA ASP GLY THR SEQRES 7 A 193 ASN ILE LYS LYS PRO ILE LYS CYS SER ALA PRO LYS TYR SEQRES 8 A 193 ILE ASP TYR LEU MET THR TRP VAL GLN ASP GLN LEU ASP SEQRES 9 A 193 ASP GLU THR LEU PHE PRO SER LYS ILE GLY VAL PRO PHE SEQRES 10 A 193 PRO LYS ASN PHE MET SER VAL ALA LYS THR ILE LEU LYS SEQRES 11 A 193 ARG LEU PHE ARG VAL TYR ALA HIS ILE TYR HIS GLN HIS SEQRES 12 A 193 PHE ASP SER VAL MET GLN LEU GLN GLU GLU ALA HIS LEU SEQRES 13 A 193 ASN THR SER PHE LYS HIS PHE ILE PHE PHE VAL GLN GLU SEQRES 14 A 193 PHE ASN LEU ILE ASP ARG ARG GLU LEU ALA PRO LEU GLN SEQRES 15 A 193 GLU LEU ILE GLU LYS LEU GLY SER LYS ASP ARG SEQRES 1 C 68 SER SER GLY HIS MET LYS LEU THR LEU GLU ASN PHE TYR SEQRES 2 C 68 SER ASN LEU ILE LEU GLN HIS GLU GLU ARG GLU THR ARG SEQRES 3 C 68 GLN LYS LYS LEU GLU VAL ALA MET GLU GLU GLU GLY LEU SEQRES 4 C 68 ALA ASP GLU GLU LYS LYS LEU ARG ARG SER GLN HIS ALA SEQRES 5 C 68 ARG LYS GLU THR GLU PHE LEU ARG LEU LYS ARG THR ARG SEQRES 6 C 68 LEU GLY LEU SEQRES 1 B 193 ALA ALA HIS HIS SER SER GLY HIS MET GLU ALA THR LEU SEQRES 2 B 193 GLY SER GLY ASN LEU ARG GLN ALA VAL MET LEU PRO GLU SEQRES 3 B 193 GLY GLU ASP LEU ASN GLU TRP ILE ALA VAL ASN THR VAL SEQRES 4 B 193 ASP PHE PHE ASN GLN ILE ASN MET LEU TYR GLY THR ILE SEQRES 5 B 193 THR GLU PHE CYS THR GLU ALA SER CYS PRO VAL MET SER SEQRES 6 B 193 ALA GLY PRO ARG TYR GLU TYR HIS TRP ALA ASP GLY THR SEQRES 7 B 193 ASN ILE LYS LYS PRO ILE LYS CYS SER ALA PRO LYS TYR SEQRES 8 B 193 ILE ASP TYR LEU MET THR TRP VAL GLN ASP GLN LEU ASP SEQRES 9 B 193 ASP GLU THR LEU PHE PRO SER LYS ILE GLY VAL PRO PHE SEQRES 10 B 193 PRO LYS ASN PHE MET SER VAL ALA LYS THR ILE LEU LYS SEQRES 11 B 193 ARG LEU PHE ARG VAL TYR ALA HIS ILE TYR HIS GLN HIS SEQRES 12 B 193 PHE ASP SER VAL MET GLN LEU GLN GLU GLU ALA HIS LEU SEQRES 13 B 193 ASN THR SER PHE LYS HIS PHE ILE PHE PHE VAL GLN GLU SEQRES 14 B 193 PHE ASN LEU ILE ASP ARG ARG GLU LEU ALA PRO LEU GLN SEQRES 15 B 193 GLU LEU ILE GLU LYS LEU GLY SER LYS ASP ARG SEQRES 1 D 68 SER SER GLY HIS MET LYS LEU THR LEU GLU ASN PHE TYR SEQRES 2 D 68 SER ASN LEU ILE LEU GLN HIS GLU GLU ARG GLU THR ARG SEQRES 3 D 68 GLN LYS LYS LEU GLU VAL ALA MET GLU GLU GLU GLY LEU SEQRES 4 D 68 ALA ASP GLU GLU LYS LYS LEU ARG ARG SER GLN HIS ALA SEQRES 5 D 68 ARG LYS GLU THR GLU PHE LEU ARG LEU LYS ARG THR ARG SEQRES 6 D 68 LEU GLY LEU HET ZN A1001 1 HET GOL A1002 6 HET GOL C 101 6 HET ZN B1001 1 HET GOL B1002 6 HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 ZN 2(ZN 2+) FORMUL 6 GOL 3(C3 H8 O3) FORMUL 10 HOH *248(H2 O) HELIX 1 AA1 ASN A 40 VAL A 45 1 6 HELIX 2 AA2 ASP A 52 THR A 74 1 23 HELIX 3 AA3 SER A 110 ASP A 127 1 18 HELIX 4 AA4 ASN A 143 HIS A 166 1 24 HELIX 5 AA5 HIS A 166 LEU A 173 1 8 HELIX 6 AA6 GLU A 175 PHE A 193 1 19 HELIX 7 AA7 ASP A 197 ALA A 202 1 6 HELIX 8 AA8 LEU A 204 GLY A 212 1 9 HELIX 9 AA9 GLY C 22 GLY C 57 1 36 HELIX 10 AB1 ALA C 59 ARG C 84 1 26 HELIX 11 AB2 GLY B 30 ALA B 34 5 5 HELIX 12 AB3 ASN B 40 VAL B 45 1 6 HELIX 13 AB4 ASP B 52 THR B 74 1 23 HELIX 14 AB5 SER B 110 ASP B 127 1 18 HELIX 15 AB6 ASN B 143 HIS B 166 1 24 HELIX 16 AB7 HIS B 166 LEU B 173 1 8 HELIX 17 AB8 GLU B 175 ASN B 194 1 20 HELIX 18 AB9 LEU B 201 PRO B 203 5 3 HELIX 19 AC1 LEU B 204 LEU B 211 1 8 HELIX 20 AC2 GLY B 212 LYS B 214 5 3 HELIX 21 AC3 SER D 21 GLY D 57 1 37 HELIX 22 AC4 ALA D 59 ARG D 84 1 26 SHEET 1 AA1 2 MET A 87 SER A 88 0 SHEET 2 AA1 2 GLU A 94 TYR A 95 -1 O TYR A 95 N MET A 87 SHEET 1 AA2 2 MET B 87 SER B 88 0 SHEET 2 AA2 2 GLU B 94 TYR B 95 -1 O TYR B 95 N MET B 87 LINK SG CYS A 79 ZN ZN A1001 1555 1555 2.35 LINK SG CYS A 84 ZN ZN A1001 1555 1555 2.41 LINK NE2 HIS A 161 ZN ZN A1001 1555 1555 2.04 LINK NE2 HIS A 166 ZN ZN A1001 1555 1555 1.89 LINK SG CYS B 79 ZN ZN B1001 1555 1555 2.32 LINK SG CYS B 84 ZN ZN B1001 1555 1555 2.33 LINK NE2 HIS B 161 ZN ZN B1001 1555 1555 2.06 LINK NE2 HIS B 166 ZN ZN B1001 1555 1555 1.98 CISPEP 1 SER B 29 GLY B 30 0 -6.49 CISPEP 2 ASP B 215 ARG B 216 0 -3.59 SITE 1 AC1 4 CYS A 79 CYS A 84 HIS A 161 HIS A 166 SITE 1 AC2 5 ASN A 66 GLN A 67 MET A 70 PHE C 31 SITE 2 AC2 5 GLU D 41 SITE 1 AC3 6 LEU C 85 HOH C 203 HOH C 205 LEU D 49 SITE 2 AC3 6 ARG D 66 HOH D 122 SITE 1 AC4 4 CYS B 79 CYS B 84 HIS B 161 HIS B 166 SITE 1 AC5 5 ASP B 63 ASN B 66 GLN B 67 LEU D 28 SITE 2 AC5 5 PHE D 31 CRYST1 57.519 94.424 102.200 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017386 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010591 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009785 0.00000