HEADER SUGAR BINDING PROTEIN 12-JUN-17 5XS8 TITLE CRYSTAL STRUCTURE OF SOLUTE-BINDING PROTEIN COMPLEXED WITH UNSATURATED TITLE 2 CHONDROITIN DISACCHARIDE WITH TWO SULFATE GROUPS AT C-4 AND C-6 TITLE 3 POSITIONS OF GALNAC COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTRACELLULAR SOLUTE-BINDING PROTEIN FAMILY 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOBACILLUS MONILIFORMIS DSM 12112; SOURCE 3 ORGANISM_TAXID: 519441; SOURCE 4 STRAIN: DSM 12112; SOURCE 5 GENE: SMON_0123; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSAMINOGLYCAN, ABC TRANSPORTER, SOLUTE-BINDING PROTEIN, SUGAR KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.OIKI,R.KAMOCHI,B.MIKAMI,K.MURATA,W.HASHIMOTO REVDAT 3 22-NOV-23 5XS8 1 HETSYN LINK REVDAT 2 29-JUL-20 5XS8 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 17-JAN-18 5XS8 0 JRNL AUTH S.OIKI,R.KAMOCHI,B.MIKAMI,K.MURATA,W.HASHIMOTO JRNL TITL ALTERNATIVE SUBSTRATE-BOUND CONFORMATION OF BACTERIAL JRNL TITL 2 SOLUTE-BINDING PROTEIN INVOLVED IN THE IMPORT OF MAMMALIAN JRNL TITL 3 HOST GLYCOSAMINOGLYCANS. JRNL REF SCI REP V. 7 17005 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 29208901 JRNL DOI 10.1038/S41598-017-16801-8 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 156219 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.4107 - 6.0576 0.95 4827 249 0.1325 0.1410 REMARK 3 2 6.0576 - 4.8106 0.99 5057 292 0.1373 0.1694 REMARK 3 3 4.8106 - 4.2033 0.99 5012 289 0.1230 0.1435 REMARK 3 4 4.2033 - 3.8193 0.99 5009 271 0.1471 0.1707 REMARK 3 5 3.8193 - 3.5457 0.99 5015 278 0.1612 0.1935 REMARK 3 6 3.5457 - 3.3368 0.99 5068 250 0.1861 0.2222 REMARK 3 7 3.3368 - 3.1697 0.99 5074 237 0.2014 0.2744 REMARK 3 8 3.1697 - 3.0318 0.98 5054 241 0.1973 0.2638 REMARK 3 9 3.0318 - 2.9151 0.98 4983 256 0.2140 0.2470 REMARK 3 10 2.9151 - 2.8145 0.98 5029 282 0.1978 0.2527 REMARK 3 11 2.8145 - 2.7266 0.98 5024 269 0.2027 0.2427 REMARK 3 12 2.7266 - 2.6486 0.98 4933 278 0.1882 0.2330 REMARK 3 13 2.6486 - 2.5789 0.98 4931 250 0.1916 0.2342 REMARK 3 14 2.5789 - 2.5160 0.98 5102 245 0.1904 0.2412 REMARK 3 15 2.5160 - 2.4588 0.98 5001 243 0.1850 0.2425 REMARK 3 16 2.4588 - 2.4065 0.98 4974 278 0.1822 0.2225 REMARK 3 17 2.4065 - 2.3584 0.98 4957 249 0.1778 0.2353 REMARK 3 18 2.3584 - 2.3139 0.97 4969 261 0.1711 0.2445 REMARK 3 19 2.3139 - 2.2725 0.97 4978 249 0.1763 0.2348 REMARK 3 20 2.2725 - 2.2340 0.97 4956 257 0.1766 0.2476 REMARK 3 21 2.2340 - 2.1980 0.97 4950 258 0.1914 0.2660 REMARK 3 22 2.1980 - 2.1642 0.97 4828 265 0.1781 0.2293 REMARK 3 23 2.1642 - 2.1324 0.97 5018 272 0.1780 0.2375 REMARK 3 24 2.1324 - 2.1023 0.97 4964 252 0.1810 0.2657 REMARK 3 25 2.1023 - 2.0739 0.97 4882 265 0.1795 0.2343 REMARK 3 26 2.0739 - 2.0470 0.97 4999 268 0.1840 0.2438 REMARK 3 27 2.0470 - 2.0214 0.97 4913 277 0.1890 0.2574 REMARK 3 28 2.0214 - 1.9970 0.97 4873 250 0.1897 0.2736 REMARK 3 29 1.9970 - 1.9738 0.95 4806 291 0.1976 0.2583 REMARK 3 30 1.9738 - 1.9516 0.81 4217 194 0.2203 0.2691 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.024 15832 REMARK 3 ANGLE : 1.803 21444 REMARK 3 CHIRALITY : 0.139 2296 REMARK 3 PLANARITY : 0.012 2748 REMARK 3 DIHEDRAL : 16.362 9556 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XS8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1300003943. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 160541 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 2.100 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.13400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5GUB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% (W/V) PEG 4000, 20% (W/V) REMARK 280 ISOPROPANOL, 0.1 M NA HEPES (PH 7.5), VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 3 REMARK 465 LEU A 4 REMARK 465 LEU A 5 REMARK 465 ALA A 6 REMARK 465 LEU A 7 REMARK 465 GLY A 8 REMARK 465 LEU A 9 REMARK 465 LEU A 10 REMARK 465 GLY A 11 REMARK 465 LEU A 12 REMARK 465 VAL A 13 REMARK 465 LEU A 14 REMARK 465 ALA A 15 REMARK 465 SER A 16 REMARK 465 CYS A 17 REMARK 465 GLY A 18 REMARK 465 LYS A 19 REMARK 465 LYS A 20 REMARK 465 GLU A 21 REMARK 465 GLU A 22 REMARK 465 THR A 23 REMARK 465 THR A 24 REMARK 465 THR A 25 REMARK 465 GLY A 26 REMARK 465 LYS A 501 REMARK 465 ASN A 502 REMARK 465 PHE A 503 REMARK 465 ASN A 504 REMARK 465 LYS A 505 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 LYS B 3 REMARK 465 LEU B 4 REMARK 465 LEU B 5 REMARK 465 ALA B 6 REMARK 465 LEU B 7 REMARK 465 GLY B 8 REMARK 465 LEU B 9 REMARK 465 LEU B 10 REMARK 465 GLY B 11 REMARK 465 LEU B 12 REMARK 465 VAL B 13 REMARK 465 LEU B 14 REMARK 465 ALA B 15 REMARK 465 SER B 16 REMARK 465 CYS B 17 REMARK 465 GLY B 18 REMARK 465 LYS B 19 REMARK 465 LYS B 20 REMARK 465 GLU B 21 REMARK 465 GLU B 22 REMARK 465 THR B 23 REMARK 465 THR B 24 REMARK 465 THR B 25 REMARK 465 GLY B 26 REMARK 465 LYS B 501 REMARK 465 ASN B 502 REMARK 465 PHE B 503 REMARK 465 ASN B 504 REMARK 465 LYS B 505 REMARK 465 MET C 1 REMARK 465 LYS C 2 REMARK 465 LYS C 3 REMARK 465 LEU C 4 REMARK 465 LEU C 5 REMARK 465 ALA C 6 REMARK 465 LEU C 7 REMARK 465 GLY C 8 REMARK 465 LEU C 9 REMARK 465 LEU C 10 REMARK 465 GLY C 11 REMARK 465 LEU C 12 REMARK 465 VAL C 13 REMARK 465 LEU C 14 REMARK 465 ALA C 15 REMARK 465 SER C 16 REMARK 465 CYS C 17 REMARK 465 GLY C 18 REMARK 465 LYS C 19 REMARK 465 LYS C 20 REMARK 465 GLU C 21 REMARK 465 GLU C 22 REMARK 465 THR C 23 REMARK 465 THR C 24 REMARK 465 THR C 25 REMARK 465 GLY C 26 REMARK 465 LYS C 501 REMARK 465 ASN C 502 REMARK 465 PHE C 503 REMARK 465 ASN C 504 REMARK 465 LYS C 505 REMARK 465 MET D 1 REMARK 465 LYS D 2 REMARK 465 LYS D 3 REMARK 465 LEU D 4 REMARK 465 LEU D 5 REMARK 465 ALA D 6 REMARK 465 LEU D 7 REMARK 465 GLY D 8 REMARK 465 LEU D 9 REMARK 465 LEU D 10 REMARK 465 GLY D 11 REMARK 465 LEU D 12 REMARK 465 VAL D 13 REMARK 465 LEU D 14 REMARK 465 ALA D 15 REMARK 465 SER D 16 REMARK 465 CYS D 17 REMARK 465 GLY D 18 REMARK 465 LYS D 19 REMARK 465 LYS D 20 REMARK 465 GLU D 21 REMARK 465 GLU D 22 REMARK 465 THR D 23 REMARK 465 THR D 24 REMARK 465 THR D 25 REMARK 465 GLY D 26 REMARK 465 LYS D 501 REMARK 465 ASN D 502 REMARK 465 PHE D 503 REMARK 465 ASN D 504 REMARK 465 LYS D 505 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 28 O HOH A 701 1.95 REMARK 500 O HOH D 703 O HOH D 982 2.08 REMARK 500 OE1 GLN A 155 NZ LYS A 210 2.10 REMARK 500 OE2 GLU A 80 NZ LYS C 491 2.10 REMARK 500 OE1 GLN D 155 NZ LYS D 210 2.12 REMARK 500 OE1 GLN B 155 NZ LYS B 210 2.15 REMARK 500 OE1 GLN C 155 NZ LYS C 210 2.16 REMARK 500 O HOH D 959 O HOH D 977 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 121 CE1 PHE A 121 CZ 0.134 REMARK 500 TYR A 128 CD1 TYR A 128 CE1 0.092 REMARK 500 TYR A 325 CE2 TYR A 325 CD2 0.106 REMARK 500 TYR A 425 CD1 TYR A 425 CE1 0.098 REMARK 500 LYS B 53 CD LYS B 53 CE 0.177 REMARK 500 GLU B 80 CB GLU B 80 CG 0.144 REMARK 500 GLU B 352 CD GLU B 352 OE1 0.085 REMARK 500 TRP B 357 CZ3 TRP B 357 CH2 0.098 REMARK 500 GLY B 402 N GLY B 402 CA 0.105 REMARK 500 GLU C 80 CD GLU C 80 OE1 0.089 REMARK 500 GLU C 352 CD GLU C 352 OE2 0.067 REMARK 500 TYR C 399 CD1 TYR C 399 CE1 0.106 REMARK 500 GLU D 80 CB GLU D 80 CG 0.144 REMARK 500 VAL D 153 CB VAL D 153 CG2 -0.135 REMARK 500 LYS D 253 CE LYS D 253 NZ 0.152 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 173 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 LYS A 183 CD - CE - NZ ANGL. DEV. = 16.1 DEGREES REMARK 500 LYS A 372 CD - CE - NZ ANGL. DEV. = 15.2 DEGREES REMARK 500 ARG B 173 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 173 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 LYS B 183 CD - CE - NZ ANGL. DEV. = 15.9 DEGREES REMARK 500 ASP B 337 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP B 337 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 LEU B 401 CA - C - N ANGL. DEV. = 14.6 DEGREES REMARK 500 LEU B 401 O - C - N ANGL. DEV. = -12.4 DEGREES REMARK 500 GLY B 402 C - N - CA ANGL. DEV. = -16.8 DEGREES REMARK 500 ASP B 406 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 LEU B 487 CA - CB - CG ANGL. DEV. = 14.9 DEGREES REMARK 500 ARG C 173 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 LEU C 401 CA - C - N ANGL. DEV. = 12.8 DEGREES REMARK 500 LEU C 401 O - C - N ANGL. DEV. = -11.5 DEGREES REMARK 500 GLY C 402 C - N - CA ANGL. DEV. = -15.6 DEGREES REMARK 500 LEU C 487 CA - CB - CG ANGL. DEV. = 16.4 DEGREES REMARK 500 ARG D 173 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 LYS D 195 CD - CE - NZ ANGL. DEV. = -17.4 DEGREES REMARK 500 ASP D 258 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP D 258 CB - CG - OD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 ASP D 337 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 LEU D 401 CA - C - N ANGL. DEV. = 12.7 DEGREES REMARK 500 LEU D 401 O - C - N ANGL. DEV. = -11.9 DEGREES REMARK 500 GLY D 402 C - N - CA ANGL. DEV. = -16.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 80 31.19 -91.43 REMARK 500 SER A 154 -88.28 -130.00 REMARK 500 ASP A 258 118.07 -36.88 REMARK 500 PHE A 302 119.52 -39.72 REMARK 500 LYS A 381 59.67 -141.29 REMARK 500 LEU A 401 -102.09 -139.93 REMARK 500 ASP A 472 106.33 -161.35 REMARK 500 GLU B 80 32.22 -91.69 REMARK 500 GLU B 101 0.81 -69.62 REMARK 500 SER B 154 -88.70 -128.78 REMARK 500 ASP B 258 118.76 -34.08 REMARK 500 LEU B 401 50.12 -156.58 REMARK 500 GLU C 29 108.24 -58.89 REMARK 500 LYS C 82 123.80 -36.80 REMARK 500 SER C 154 -89.35 -129.61 REMARK 500 ASP C 258 119.11 -36.51 REMARK 500 ASN C 313 51.16 39.87 REMARK 500 SER C 364 -68.25 -120.05 REMARK 500 LEU C 401 39.36 -157.15 REMARK 500 ASP C 472 104.94 -160.70 REMARK 500 GLU D 80 30.69 -92.02 REMARK 500 SER D 154 -86.38 -129.98 REMARK 500 ASP D 258 120.02 -35.09 REMARK 500 LEU D 401 40.90 -156.21 REMARK 500 ASP D 472 107.68 -163.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1027 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH C1026 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH D1019 DISTANCE = 6.23 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 189 OD1 REMARK 620 2 ASN A 191 OD1 86.8 REMARK 620 3 ASN A 193 OD1 81.4 74.2 REMARK 620 4 LYS A 195 O 89.2 160.9 86.7 REMARK 620 5 ASP A 197 OD1 168.4 99.5 90.9 81.7 REMARK 620 6 GLU A 198 OE1 110.6 118.5 162.0 80.3 75.0 REMARK 620 7 GLU A 198 OE2 88.7 73.3 146.4 125.4 102.4 50.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 189 OD1 REMARK 620 2 ASN B 191 OD1 91.3 REMARK 620 3 ASN B 193 OD1 81.9 74.3 REMARK 620 4 LYS B 195 O 87.9 160.9 86.7 REMARK 620 5 ASP B 197 OD1 166.1 98.6 91.4 79.5 REMARK 620 6 GLU B 198 OE1 109.2 116.7 163.2 81.4 74.9 REMARK 620 7 GLU B 198 OE2 90.5 71.3 144.6 127.7 101.8 50.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 189 OD1 REMARK 620 2 ASN C 191 OD1 92.2 REMARK 620 3 ASN C 193 OD1 83.0 75.2 REMARK 620 4 LYS C 195 O 87.6 161.6 86.6 REMARK 620 5 ASP C 197 OD1 164.4 100.6 91.6 77.5 REMARK 620 6 GLU C 198 OE1 89.8 75.3 149.2 123.1 102.0 REMARK 620 7 GLU C 198 OE2 109.0 118.2 160.6 79.1 72.8 48.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 189 OD1 REMARK 620 2 ASN D 191 OD1 89.3 REMARK 620 3 ASN D 193 OD1 80.8 72.3 REMARK 620 4 LYS D 195 O 88.4 158.5 86.2 REMARK 620 5 ASP D 197 OD1 168.8 97.1 92.4 82.2 REMARK 620 6 GLU D 198 OE1 109.6 120.3 162.7 80.4 75.0 REMARK 620 7 GLU D 198 OE2 88.1 75.2 145.7 126.1 102.3 50.8 REMARK 620 N 1 2 3 4 5 6 DBREF 5XS8 A 1 505 UNP D1AWE0 D1AWE0_STRM9 1 505 DBREF 5XS8 B 1 505 UNP D1AWE0 D1AWE0_STRM9 1 505 DBREF 5XS8 C 1 505 UNP D1AWE0 D1AWE0_STRM9 1 505 DBREF 5XS8 D 1 505 UNP D1AWE0 D1AWE0_STRM9 1 505 SEQRES 1 A 505 MET LYS LYS LEU LEU ALA LEU GLY LEU LEU GLY LEU VAL SEQRES 2 A 505 LEU ALA SER CYS GLY LYS LYS GLU GLU THR THR THR GLY SEQRES 3 A 505 PRO LYS GLU THR THR ILE PHE ALA MET HIS LEU GLY LYS SEQRES 4 A 505 ALA LEU ASP PRO ASN LEU PRO VAL PHE VAL LYS ALA GLU SEQRES 5 A 505 LYS ASP THR ASN ILE LYS LEU VAL ASN VAL ALA SER GLN SEQRES 6 A 505 ASN GLN THR ASP GLN ILE GLN ALA TYR ASN LEU MET LEU SEQRES 7 A 505 THR GLU GLY LYS LEU PRO ASP ILE VAL SER TYR GLU LEU SEQRES 8 A 505 SER ALA ASP LEU GLU ASN LEU GLY ILE GLU GLY GLY LEU SEQRES 9 A 505 ILE PRO LEU GLU ASP LEU ILE ASN GLN HIS ALA PRO ASN SEQRES 10 A 505 LEU LYS LYS PHE PHE GLU GLU ASN PRO ARG TYR LYS LYS SEQRES 11 A 505 ASP ALA VAL ALA VAL ASP GLY HIS ILE TYR MET ILE PRO SEQRES 12 A 505 ASN TYR TYR ASP TYR PHE ASN ILE LYS VAL SER GLN GLY SEQRES 13 A 505 TYR PHE ILE ARG GLN ASP TRP LEU GLU LYS LEU GLY LEU SEQRES 14 A 505 LYS GLU PRO ARG THR VAL ASP GLU LEU TYR THR THR LEU SEQRES 15 A 505 LYS ALA PHE ARG GLU LYS ASP PRO ASN GLY ASN GLY LYS SEQRES 16 A 505 LYS ASP GLU VAL PRO PHE PHE VAL ARG ALA ASN ASN VAL SEQRES 17 A 505 ARG LYS VAL LEU THR SER LEU VAL ASP LEU PHE LYS ALA SEQRES 18 A 505 SER PRO ILE TRP TYR GLU GLU ASN GLY MET VAL LYS TYR SEQRES 19 A 505 GLY PRO ALA GLN LYS GLU PHE LYS HIS ALA ILE LYS GLU SEQRES 20 A 505 LEU SER LYS TRP TYR LYS GLU GLY LEU ILE ASP GLU GLU SEQRES 21 A 505 ILE PHE THR ARG GLY LEU GLU SER ARG ASP TYR LEU LEU SEQRES 22 A 505 SER ASN ASN LEU GLY GLY ALA THR ASP ASP TRP ILE ALA SEQRES 23 A 505 SER THR SER SER TYR ASN ARG ASN LEU ALA ASP LYS ILE SEQRES 24 A 505 PRO GLY PHE ASN LEU LYS LEU VAL LEU PRO TYR GLU LEU SEQRES 25 A 505 ASN GLY ASN ALA LYS THR ARG HIS ALA ARG THR THR TYR SEQRES 26 A 505 LEU GLY GLY TRP GLY ILE SER LYS ASP ALA LYS ASP PRO SEQRES 27 A 505 VAL SER LEU ILE LYS TYR PHE ASP TYR TRP TYR SER VAL SEQRES 28 A 505 GLU GLY ARG ARG LEU TRP ASN PHE GLY ILE GLU GLY SER SEQRES 29 A 505 GLU TYR THR LEU VAL ASP GLY LYS PRO VAL PHE THR ASP SEQRES 30 A 505 LYS VAL LEU LYS ASN PRO ASP GLY LYS THR PRO LEU ALA SEQRES 31 A 505 VAL LEU ARG GLU VAL GLY ALA GLN TYR ARG LEU GLY ALA SEQRES 32 A 505 PHE GLN ASP ALA GLN TYR GLU LEU GLY TRP ALA SER GLU SEQRES 33 A 505 SER ALA LYS ALA GLY TYR LYS TYR TYR MET ASP ASN ASP SEQRES 34 A 505 VAL VAL LEU ASP GLU LEU PRO ILE LEU LYS TYR THR LYS SEQRES 35 A 505 GLU LYS SER LYS GLU PHE VAL SER ILE ASP THR ALA MET SEQRES 36 A 505 ARG ALA VAL VAL GLU GLU LYS ALA GLN GLN TRP ILE LEU SEQRES 37 A 505 GLY SER GLY ASP ILE ASP LYS GLU TRP ASP ALA TYR ILE SEQRES 38 A 505 LYS ARG LEU GLU ASN LEU GLY LEU SER LYS ALA GLU GLN SEQRES 39 A 505 ILE GLN ASN GLU ALA PHE LYS ASN PHE ASN LYS SEQRES 1 B 505 MET LYS LYS LEU LEU ALA LEU GLY LEU LEU GLY LEU VAL SEQRES 2 B 505 LEU ALA SER CYS GLY LYS LYS GLU GLU THR THR THR GLY SEQRES 3 B 505 PRO LYS GLU THR THR ILE PHE ALA MET HIS LEU GLY LYS SEQRES 4 B 505 ALA LEU ASP PRO ASN LEU PRO VAL PHE VAL LYS ALA GLU SEQRES 5 B 505 LYS ASP THR ASN ILE LYS LEU VAL ASN VAL ALA SER GLN SEQRES 6 B 505 ASN GLN THR ASP GLN ILE GLN ALA TYR ASN LEU MET LEU SEQRES 7 B 505 THR GLU GLY LYS LEU PRO ASP ILE VAL SER TYR GLU LEU SEQRES 8 B 505 SER ALA ASP LEU GLU ASN LEU GLY ILE GLU GLY GLY LEU SEQRES 9 B 505 ILE PRO LEU GLU ASP LEU ILE ASN GLN HIS ALA PRO ASN SEQRES 10 B 505 LEU LYS LYS PHE PHE GLU GLU ASN PRO ARG TYR LYS LYS SEQRES 11 B 505 ASP ALA VAL ALA VAL ASP GLY HIS ILE TYR MET ILE PRO SEQRES 12 B 505 ASN TYR TYR ASP TYR PHE ASN ILE LYS VAL SER GLN GLY SEQRES 13 B 505 TYR PHE ILE ARG GLN ASP TRP LEU GLU LYS LEU GLY LEU SEQRES 14 B 505 LYS GLU PRO ARG THR VAL ASP GLU LEU TYR THR THR LEU SEQRES 15 B 505 LYS ALA PHE ARG GLU LYS ASP PRO ASN GLY ASN GLY LYS SEQRES 16 B 505 LYS ASP GLU VAL PRO PHE PHE VAL ARG ALA ASN ASN VAL SEQRES 17 B 505 ARG LYS VAL LEU THR SER LEU VAL ASP LEU PHE LYS ALA SEQRES 18 B 505 SER PRO ILE TRP TYR GLU GLU ASN GLY MET VAL LYS TYR SEQRES 19 B 505 GLY PRO ALA GLN LYS GLU PHE LYS HIS ALA ILE LYS GLU SEQRES 20 B 505 LEU SER LYS TRP TYR LYS GLU GLY LEU ILE ASP GLU GLU SEQRES 21 B 505 ILE PHE THR ARG GLY LEU GLU SER ARG ASP TYR LEU LEU SEQRES 22 B 505 SER ASN ASN LEU GLY GLY ALA THR ASP ASP TRP ILE ALA SEQRES 23 B 505 SER THR SER SER TYR ASN ARG ASN LEU ALA ASP LYS ILE SEQRES 24 B 505 PRO GLY PHE ASN LEU LYS LEU VAL LEU PRO TYR GLU LEU SEQRES 25 B 505 ASN GLY ASN ALA LYS THR ARG HIS ALA ARG THR THR TYR SEQRES 26 B 505 LEU GLY GLY TRP GLY ILE SER LYS ASP ALA LYS ASP PRO SEQRES 27 B 505 VAL SER LEU ILE LYS TYR PHE ASP TYR TRP TYR SER VAL SEQRES 28 B 505 GLU GLY ARG ARG LEU TRP ASN PHE GLY ILE GLU GLY SER SEQRES 29 B 505 GLU TYR THR LEU VAL ASP GLY LYS PRO VAL PHE THR ASP SEQRES 30 B 505 LYS VAL LEU LYS ASN PRO ASP GLY LYS THR PRO LEU ALA SEQRES 31 B 505 VAL LEU ARG GLU VAL GLY ALA GLN TYR ARG LEU GLY ALA SEQRES 32 B 505 PHE GLN ASP ALA GLN TYR GLU LEU GLY TRP ALA SER GLU SEQRES 33 B 505 SER ALA LYS ALA GLY TYR LYS TYR TYR MET ASP ASN ASP SEQRES 34 B 505 VAL VAL LEU ASP GLU LEU PRO ILE LEU LYS TYR THR LYS SEQRES 35 B 505 GLU LYS SER LYS GLU PHE VAL SER ILE ASP THR ALA MET SEQRES 36 B 505 ARG ALA VAL VAL GLU GLU LYS ALA GLN GLN TRP ILE LEU SEQRES 37 B 505 GLY SER GLY ASP ILE ASP LYS GLU TRP ASP ALA TYR ILE SEQRES 38 B 505 LYS ARG LEU GLU ASN LEU GLY LEU SER LYS ALA GLU GLN SEQRES 39 B 505 ILE GLN ASN GLU ALA PHE LYS ASN PHE ASN LYS SEQRES 1 C 505 MET LYS LYS LEU LEU ALA LEU GLY LEU LEU GLY LEU VAL SEQRES 2 C 505 LEU ALA SER CYS GLY LYS LYS GLU GLU THR THR THR GLY SEQRES 3 C 505 PRO LYS GLU THR THR ILE PHE ALA MET HIS LEU GLY LYS SEQRES 4 C 505 ALA LEU ASP PRO ASN LEU PRO VAL PHE VAL LYS ALA GLU SEQRES 5 C 505 LYS ASP THR ASN ILE LYS LEU VAL ASN VAL ALA SER GLN SEQRES 6 C 505 ASN GLN THR ASP GLN ILE GLN ALA TYR ASN LEU MET LEU SEQRES 7 C 505 THR GLU GLY LYS LEU PRO ASP ILE VAL SER TYR GLU LEU SEQRES 8 C 505 SER ALA ASP LEU GLU ASN LEU GLY ILE GLU GLY GLY LEU SEQRES 9 C 505 ILE PRO LEU GLU ASP LEU ILE ASN GLN HIS ALA PRO ASN SEQRES 10 C 505 LEU LYS LYS PHE PHE GLU GLU ASN PRO ARG TYR LYS LYS SEQRES 11 C 505 ASP ALA VAL ALA VAL ASP GLY HIS ILE TYR MET ILE PRO SEQRES 12 C 505 ASN TYR TYR ASP TYR PHE ASN ILE LYS VAL SER GLN GLY SEQRES 13 C 505 TYR PHE ILE ARG GLN ASP TRP LEU GLU LYS LEU GLY LEU SEQRES 14 C 505 LYS GLU PRO ARG THR VAL ASP GLU LEU TYR THR THR LEU SEQRES 15 C 505 LYS ALA PHE ARG GLU LYS ASP PRO ASN GLY ASN GLY LYS SEQRES 16 C 505 LYS ASP GLU VAL PRO PHE PHE VAL ARG ALA ASN ASN VAL SEQRES 17 C 505 ARG LYS VAL LEU THR SER LEU VAL ASP LEU PHE LYS ALA SEQRES 18 C 505 SER PRO ILE TRP TYR GLU GLU ASN GLY MET VAL LYS TYR SEQRES 19 C 505 GLY PRO ALA GLN LYS GLU PHE LYS HIS ALA ILE LYS GLU SEQRES 20 C 505 LEU SER LYS TRP TYR LYS GLU GLY LEU ILE ASP GLU GLU SEQRES 21 C 505 ILE PHE THR ARG GLY LEU GLU SER ARG ASP TYR LEU LEU SEQRES 22 C 505 SER ASN ASN LEU GLY GLY ALA THR ASP ASP TRP ILE ALA SEQRES 23 C 505 SER THR SER SER TYR ASN ARG ASN LEU ALA ASP LYS ILE SEQRES 24 C 505 PRO GLY PHE ASN LEU LYS LEU VAL LEU PRO TYR GLU LEU SEQRES 25 C 505 ASN GLY ASN ALA LYS THR ARG HIS ALA ARG THR THR TYR SEQRES 26 C 505 LEU GLY GLY TRP GLY ILE SER LYS ASP ALA LYS ASP PRO SEQRES 27 C 505 VAL SER LEU ILE LYS TYR PHE ASP TYR TRP TYR SER VAL SEQRES 28 C 505 GLU GLY ARG ARG LEU TRP ASN PHE GLY ILE GLU GLY SER SEQRES 29 C 505 GLU TYR THR LEU VAL ASP GLY LYS PRO VAL PHE THR ASP SEQRES 30 C 505 LYS VAL LEU LYS ASN PRO ASP GLY LYS THR PRO LEU ALA SEQRES 31 C 505 VAL LEU ARG GLU VAL GLY ALA GLN TYR ARG LEU GLY ALA SEQRES 32 C 505 PHE GLN ASP ALA GLN TYR GLU LEU GLY TRP ALA SER GLU SEQRES 33 C 505 SER ALA LYS ALA GLY TYR LYS TYR TYR MET ASP ASN ASP SEQRES 34 C 505 VAL VAL LEU ASP GLU LEU PRO ILE LEU LYS TYR THR LYS SEQRES 35 C 505 GLU LYS SER LYS GLU PHE VAL SER ILE ASP THR ALA MET SEQRES 36 C 505 ARG ALA VAL VAL GLU GLU LYS ALA GLN GLN TRP ILE LEU SEQRES 37 C 505 GLY SER GLY ASP ILE ASP LYS GLU TRP ASP ALA TYR ILE SEQRES 38 C 505 LYS ARG LEU GLU ASN LEU GLY LEU SER LYS ALA GLU GLN SEQRES 39 C 505 ILE GLN ASN GLU ALA PHE LYS ASN PHE ASN LYS SEQRES 1 D 505 MET LYS LYS LEU LEU ALA LEU GLY LEU LEU GLY LEU VAL SEQRES 2 D 505 LEU ALA SER CYS GLY LYS LYS GLU GLU THR THR THR GLY SEQRES 3 D 505 PRO LYS GLU THR THR ILE PHE ALA MET HIS LEU GLY LYS SEQRES 4 D 505 ALA LEU ASP PRO ASN LEU PRO VAL PHE VAL LYS ALA GLU SEQRES 5 D 505 LYS ASP THR ASN ILE LYS LEU VAL ASN VAL ALA SER GLN SEQRES 6 D 505 ASN GLN THR ASP GLN ILE GLN ALA TYR ASN LEU MET LEU SEQRES 7 D 505 THR GLU GLY LYS LEU PRO ASP ILE VAL SER TYR GLU LEU SEQRES 8 D 505 SER ALA ASP LEU GLU ASN LEU GLY ILE GLU GLY GLY LEU SEQRES 9 D 505 ILE PRO LEU GLU ASP LEU ILE ASN GLN HIS ALA PRO ASN SEQRES 10 D 505 LEU LYS LYS PHE PHE GLU GLU ASN PRO ARG TYR LYS LYS SEQRES 11 D 505 ASP ALA VAL ALA VAL ASP GLY HIS ILE TYR MET ILE PRO SEQRES 12 D 505 ASN TYR TYR ASP TYR PHE ASN ILE LYS VAL SER GLN GLY SEQRES 13 D 505 TYR PHE ILE ARG GLN ASP TRP LEU GLU LYS LEU GLY LEU SEQRES 14 D 505 LYS GLU PRO ARG THR VAL ASP GLU LEU TYR THR THR LEU SEQRES 15 D 505 LYS ALA PHE ARG GLU LYS ASP PRO ASN GLY ASN GLY LYS SEQRES 16 D 505 LYS ASP GLU VAL PRO PHE PHE VAL ARG ALA ASN ASN VAL SEQRES 17 D 505 ARG LYS VAL LEU THR SER LEU VAL ASP LEU PHE LYS ALA SEQRES 18 D 505 SER PRO ILE TRP TYR GLU GLU ASN GLY MET VAL LYS TYR SEQRES 19 D 505 GLY PRO ALA GLN LYS GLU PHE LYS HIS ALA ILE LYS GLU SEQRES 20 D 505 LEU SER LYS TRP TYR LYS GLU GLY LEU ILE ASP GLU GLU SEQRES 21 D 505 ILE PHE THR ARG GLY LEU GLU SER ARG ASP TYR LEU LEU SEQRES 22 D 505 SER ASN ASN LEU GLY GLY ALA THR ASP ASP TRP ILE ALA SEQRES 23 D 505 SER THR SER SER TYR ASN ARG ASN LEU ALA ASP LYS ILE SEQRES 24 D 505 PRO GLY PHE ASN LEU LYS LEU VAL LEU PRO TYR GLU LEU SEQRES 25 D 505 ASN GLY ASN ALA LYS THR ARG HIS ALA ARG THR THR TYR SEQRES 26 D 505 LEU GLY GLY TRP GLY ILE SER LYS ASP ALA LYS ASP PRO SEQRES 27 D 505 VAL SER LEU ILE LYS TYR PHE ASP TYR TRP TYR SER VAL SEQRES 28 D 505 GLU GLY ARG ARG LEU TRP ASN PHE GLY ILE GLU GLY SER SEQRES 29 D 505 GLU TYR THR LEU VAL ASP GLY LYS PRO VAL PHE THR ASP SEQRES 30 D 505 LYS VAL LEU LYS ASN PRO ASP GLY LYS THR PRO LEU ALA SEQRES 31 D 505 VAL LEU ARG GLU VAL GLY ALA GLN TYR ARG LEU GLY ALA SEQRES 32 D 505 PHE GLN ASP ALA GLN TYR GLU LEU GLY TRP ALA SER GLU SEQRES 33 D 505 SER ALA LYS ALA GLY TYR LYS TYR TYR MET ASP ASN ASP SEQRES 34 D 505 VAL VAL LEU ASP GLU LEU PRO ILE LEU LYS TYR THR LYS SEQRES 35 D 505 GLU LYS SER LYS GLU PHE VAL SER ILE ASP THR ALA MET SEQRES 36 D 505 ARG ALA VAL VAL GLU GLU LYS ALA GLN GLN TRP ILE LEU SEQRES 37 D 505 GLY SER GLY ASP ILE ASP LYS GLU TRP ASP ALA TYR ILE SEQRES 38 D 505 LYS ARG LEU GLU ASN LEU GLY LEU SER LYS ALA GLU GLN SEQRES 39 D 505 ILE GLN ASN GLU ALA PHE LYS ASN PHE ASN LYS HET 8EX E 1 23 HET GCD E 2 11 HET 8EX F 1 23 HET GCD F 2 11 HET 8EX G 1 23 HET GCD G 2 11 HET 8EX H 1 23 HET GCD H 2 11 HET CA A 601 1 HET CA B 601 1 HET CA C 601 1 HET CA D 601 1 HETNAM 8EX 2-ACETAMIDO-2-DEOXY-4,6-DI-O-SULFO-BETA-D- HETNAM 2 8EX GALACTOPYRANOSE HETNAM GCD 4-DEOXY-ALPHA-L-THREO-HEX-4-ENOPYRANURONIC ACID HETNAM CA CALCIUM ION HETSYN 8EX [(2R,3R,4R,5R,6R)-5-ACETAMIDO-4,6-BIS(OXIDANYL)-2- HETSYN 2 8EX (SULFOOXYMETHYL)OXAN-3-YL] HYDROGEN SULFATE; N-ACETYL- HETSYN 3 8EX 4-SULFO-6-SULFO-BETA-D-GALACTOPYRANOSE; 2-ACETAMIDO-2- HETSYN 4 8EX DEOXY-4,6-DI-O-SULFO-BETA-D-GALACTOSE; 2-ACETAMIDO-2- HETSYN 5 8EX DEOXY-4,6-DI-O-SULFO-D-GALACTOSE; 2-ACETAMIDO-2-DEOXY- HETSYN 6 8EX 4,6-DI-O-SULFO-GALACTOSE HETSYN GCD 4,5-DEHYDRO-D-GLUCURONIC ACID; 4-DEOXY-ALPHA-L-THREO- HETSYN 2 GCD HEX-4-ENURONIC ACID; 4-DEOXY-L-THREO-HEX-4-ENURONIC HETSYN 3 GCD ACID; 4-DEOXY-THREO-HEX-4-ENURONIC ACID FORMUL 5 8EX 4(C8 H15 N O12 S2) FORMUL 5 GCD 4(C6 H8 O6) FORMUL 9 CA 4(CA 2+) FORMUL 13 HOH *1293(H2 O) HELIX 1 AA1 LEU A 45 ASN A 56 1 12 HELIX 2 AA2 ASP A 69 GLU A 80 1 12 HELIX 3 AA3 LEU A 91 GLU A 101 1 11 HELIX 4 AA4 LEU A 107 ALA A 115 1 9 HELIX 5 AA5 ALA A 115 ASN A 125 1 11 HELIX 6 AA6 ASN A 125 VAL A 133 1 9 HELIX 7 AA7 GLN A 161 LEU A 167 1 7 HELIX 8 AA8 THR A 174 LYS A 188 1 15 HELIX 9 AA9 ASN A 207 ASP A 217 1 11 HELIX 10 AB1 LEU A 218 LYS A 220 5 3 HELIX 11 AB2 GLN A 238 GLU A 254 1 17 HELIX 12 AB3 GLU A 267 ASN A 275 1 9 HELIX 13 AB4 ILE A 285 SER A 290 1 6 HELIX 14 AB5 SER A 290 LEU A 295 1 6 HELIX 15 AB6 ASP A 337 TRP A 348 1 12 HELIX 16 AB7 SER A 350 GLY A 360 1 11 HELIX 17 AB8 THR A 376 LYS A 381 1 6 HELIX 18 AB9 THR A 387 VAL A 395 1 9 HELIX 19 AC1 ASP A 406 ALA A 414 1 9 HELIX 20 AC2 SER A 415 ASN A 428 1 14 HELIX 21 AC3 THR A 441 LEU A 468 1 28 HELIX 22 AC4 ASP A 472 LEU A 487 1 16 HELIX 23 AC5 GLY A 488 PHE A 500 1 13 HELIX 24 AC6 LEU B 45 ASN B 56 1 12 HELIX 25 AC7 ASP B 69 GLU B 80 1 12 HELIX 26 AC8 LEU B 91 GLU B 101 1 11 HELIX 27 AC9 LEU B 107 ALA B 115 1 9 HELIX 28 AD1 ALA B 115 ASN B 125 1 11 HELIX 29 AD2 ASN B 125 VAL B 133 1 9 HELIX 30 AD3 GLN B 161 LEU B 167 1 7 HELIX 31 AD4 THR B 174 LYS B 188 1 15 HELIX 32 AD5 ASN B 207 ASP B 217 1 11 HELIX 33 AD6 LEU B 218 LYS B 220 5 3 HELIX 34 AD7 GLN B 238 GLU B 254 1 17 HELIX 35 AD8 GLU B 267 ASN B 275 1 9 HELIX 36 AD9 ILE B 285 SER B 290 1 6 HELIX 37 AE1 SER B 290 LEU B 295 1 6 HELIX 38 AE2 ASP B 337 TRP B 348 1 12 HELIX 39 AE3 SER B 350 GLY B 360 1 11 HELIX 40 AE4 THR B 376 LYS B 381 1 6 HELIX 41 AE5 THR B 387 VAL B 395 1 9 HELIX 42 AE6 ASP B 406 ALA B 414 1 9 HELIX 43 AE7 SER B 415 ASN B 428 1 14 HELIX 44 AE8 THR B 441 LEU B 468 1 28 HELIX 45 AE9 ASP B 472 LEU B 487 1 16 HELIX 46 AF1 GLY B 488 PHE B 500 1 13 HELIX 47 AF2 LEU C 45 ASN C 56 1 12 HELIX 48 AF3 ASP C 69 GLU C 80 1 12 HELIX 49 AF4 LEU C 91 GLU C 101 1 11 HELIX 50 AF5 LEU C 107 ALA C 115 1 9 HELIX 51 AF6 ALA C 115 ASN C 125 1 11 HELIX 52 AF7 ASN C 125 VAL C 133 1 9 HELIX 53 AF8 GLN C 161 LEU C 167 1 7 HELIX 54 AF9 THR C 174 LYS C 188 1 15 HELIX 55 AG1 ASN C 207 ASP C 217 1 11 HELIX 56 AG2 LEU C 218 LYS C 220 5 3 HELIX 57 AG3 GLN C 238 GLU C 254 1 17 HELIX 58 AG4 GLU C 267 ASN C 275 1 9 HELIX 59 AG5 ILE C 285 SER C 290 1 6 HELIX 60 AG6 SER C 290 LEU C 295 1 6 HELIX 61 AG7 ASP C 337 TRP C 348 1 12 HELIX 62 AG8 SER C 350 GLY C 360 1 11 HELIX 63 AG9 THR C 376 LYS C 381 1 6 HELIX 64 AH1 THR C 387 VAL C 395 1 9 HELIX 65 AH2 ASP C 406 ALA C 414 1 9 HELIX 66 AH3 SER C 415 ASN C 428 1 14 HELIX 67 AH4 THR C 441 LEU C 468 1 28 HELIX 68 AH5 ASP C 472 LEU C 487 1 16 HELIX 69 AH6 GLY C 488 PHE C 500 1 13 HELIX 70 AH7 LEU D 45 ASN D 56 1 12 HELIX 71 AH8 ASP D 69 GLU D 80 1 12 HELIX 72 AH9 LEU D 91 GLU D 101 1 11 HELIX 73 AI1 LEU D 107 ALA D 115 1 9 HELIX 74 AI2 ALA D 115 ASN D 125 1 11 HELIX 75 AI3 ASN D 125 VAL D 133 1 9 HELIX 76 AI4 GLN D 161 LEU D 167 1 7 HELIX 77 AI5 THR D 174 LYS D 188 1 15 HELIX 78 AI6 ASN D 207 ASP D 217 1 11 HELIX 79 AI7 LEU D 218 LYS D 220 5 3 HELIX 80 AI8 GLN D 238 GLU D 254 1 17 HELIX 81 AI9 GLU D 267 ASN D 275 1 9 HELIX 82 AJ1 ILE D 285 SER D 290 1 6 HELIX 83 AJ2 SER D 290 LEU D 295 1 6 HELIX 84 AJ3 ASP D 337 TRP D 348 1 12 HELIX 85 AJ4 SER D 350 GLY D 360 1 11 HELIX 86 AJ5 THR D 376 LYS D 381 1 6 HELIX 87 AJ6 THR D 387 VAL D 395 1 9 HELIX 88 AJ7 ASP D 406 ALA D 414 1 9 HELIX 89 AJ8 SER D 415 ASN D 428 1 14 HELIX 90 AJ9 THR D 441 LEU D 468 1 28 HELIX 91 AK1 ASP D 472 LEU D 487 1 16 HELIX 92 AK2 GLY D 488 PHE D 500 1 13 SHEET 1 AA1 5 ILE A 57 ASN A 61 0 SHEET 2 AA1 5 LYS A 28 PHE A 33 1 N THR A 30 O LYS A 58 SHEET 3 AA1 5 ILE A 86 TYR A 89 1 O SER A 88 N PHE A 33 SHEET 4 AA1 5 TYR A 325 ILE A 331 -1 O GLY A 328 N TYR A 89 SHEET 5 AA1 5 ILE A 142 TYR A 145 -1 N ILE A 142 O TRP A 329 SHEET 1 AA2 2 MET A 35 HIS A 36 0 SHEET 2 AA2 2 LYS A 39 ALA A 40 -1 O LYS A 39 N HIS A 36 SHEET 1 AA3 4 VAL A 199 PHE A 202 0 SHEET 2 AA3 4 GLY A 278 TRP A 284 1 O ALA A 280 N PHE A 202 SHEET 3 AA3 4 GLN A 155 ARG A 160 -1 N GLY A 156 O ASP A 283 SHEET 4 AA3 4 LEU A 304 VAL A 307 -1 O VAL A 307 N TYR A 157 SHEET 1 AA4 2 TRP A 225 GLU A 228 0 SHEET 2 AA4 2 MET A 231 TYR A 234 -1 O MET A 231 N GLU A 228 SHEET 1 AA5 2 TYR A 366 VAL A 369 0 SHEET 2 AA5 2 LYS A 372 PHE A 375 -1 O LYS A 372 N VAL A 369 SHEET 1 AA6 5 ILE B 57 ASN B 61 0 SHEET 2 AA6 5 LYS B 28 PHE B 33 1 N THR B 30 O LYS B 58 SHEET 3 AA6 5 ILE B 86 TYR B 89 1 O SER B 88 N PHE B 33 SHEET 4 AA6 5 TYR B 325 ILE B 331 -1 O GLY B 328 N TYR B 89 SHEET 5 AA6 5 ILE B 142 TYR B 145 -1 N ILE B 142 O TRP B 329 SHEET 1 AA7 2 MET B 35 HIS B 36 0 SHEET 2 AA7 2 LYS B 39 ALA B 40 -1 O LYS B 39 N HIS B 36 SHEET 1 AA8 4 VAL B 199 PHE B 202 0 SHEET 2 AA8 4 GLY B 278 TRP B 284 1 O ALA B 280 N PHE B 202 SHEET 3 AA8 4 GLN B 155 ARG B 160 -1 N GLY B 156 O ASP B 283 SHEET 4 AA8 4 LEU B 304 VAL B 307 -1 O LYS B 305 N ILE B 159 SHEET 1 AA9 2 TRP B 225 GLU B 228 0 SHEET 2 AA9 2 MET B 231 TYR B 234 -1 O MET B 231 N GLU B 228 SHEET 1 AB1 2 TYR B 366 VAL B 369 0 SHEET 2 AB1 2 LYS B 372 PHE B 375 -1 O LYS B 372 N VAL B 369 SHEET 1 AB2 5 ILE C 57 ASN C 61 0 SHEET 2 AB2 5 LYS C 28 PHE C 33 1 N THR C 30 O LYS C 58 SHEET 3 AB2 5 ILE C 86 TYR C 89 1 O SER C 88 N PHE C 33 SHEET 4 AB2 5 TYR C 325 ILE C 331 -1 O GLY C 330 N VAL C 87 SHEET 5 AB2 5 ILE C 142 TYR C 145 -1 N ILE C 142 O TRP C 329 SHEET 1 AB3 2 MET C 35 HIS C 36 0 SHEET 2 AB3 2 LYS C 39 ALA C 40 -1 O LYS C 39 N HIS C 36 SHEET 1 AB4 4 VAL C 199 PHE C 202 0 SHEET 2 AB4 4 GLY C 278 TRP C 284 1 O ALA C 280 N PHE C 202 SHEET 3 AB4 4 GLN C 155 ARG C 160 -1 N GLY C 156 O ASP C 283 SHEET 4 AB4 4 LEU C 304 VAL C 307 -1 O LYS C 305 N ILE C 159 SHEET 1 AB5 2 TRP C 225 GLU C 228 0 SHEET 2 AB5 2 MET C 231 TYR C 234 -1 O MET C 231 N GLU C 228 SHEET 1 AB6 2 TYR C 366 VAL C 369 0 SHEET 2 AB6 2 LYS C 372 PHE C 375 -1 O LYS C 372 N VAL C 369 SHEET 1 AB7 5 LEU D 59 ASN D 61 0 SHEET 2 AB7 5 THR D 30 PHE D 33 1 N ILE D 32 O VAL D 60 SHEET 3 AB7 5 ILE D 86 TYR D 89 1 O SER D 88 N PHE D 33 SHEET 4 AB7 5 TYR D 325 ILE D 331 -1 O GLY D 330 N VAL D 87 SHEET 5 AB7 5 ILE D 142 TYR D 145 -1 N ILE D 142 O TRP D 329 SHEET 1 AB8 2 MET D 35 HIS D 36 0 SHEET 2 AB8 2 LYS D 39 ALA D 40 -1 O LYS D 39 N HIS D 36 SHEET 1 AB9 4 VAL D 199 PHE D 202 0 SHEET 2 AB9 4 GLY D 278 TRP D 284 1 O ALA D 280 N PHE D 202 SHEET 3 AB9 4 GLN D 155 ARG D 160 -1 N GLY D 156 O ASP D 283 SHEET 4 AB9 4 LEU D 304 VAL D 307 -1 O VAL D 307 N TYR D 157 SHEET 1 AC1 2 TRP D 225 GLU D 228 0 SHEET 2 AC1 2 MET D 231 TYR D 234 -1 O MET D 231 N GLU D 228 SHEET 1 AC2 2 TYR D 366 VAL D 369 0 SHEET 2 AC2 2 LYS D 372 PHE D 375 -1 O LYS D 372 N VAL D 369 LINK O3 8EX E 1 C1 GCD E 2 1555 1555 1.42 LINK O3 8EX F 1 C1 GCD F 2 1555 1555 1.41 LINK O3 8EX G 1 C1 GCD G 2 1555 1555 1.40 LINK O3 8EX H 1 C1 GCD H 2 1555 1555 1.42 LINK OD1 ASP A 189 CA CA A 601 1555 1555 2.23 LINK OD1 ASN A 191 CA CA A 601 1555 1555 2.23 LINK OD1 ASN A 193 CA CA A 601 1555 1555 2.52 LINK O LYS A 195 CA CA A 601 1555 1555 2.45 LINK OD1 ASP A 197 CA CA A 601 1555 1555 2.30 LINK OE1 GLU A 198 CA CA A 601 1555 1555 2.76 LINK OE2 GLU A 198 CA CA A 601 1555 1555 2.45 LINK OD1 ASP B 189 CA CA B 601 1555 1555 2.22 LINK OD1 ASN B 191 CA CA B 601 1555 1555 2.22 LINK OD1 ASN B 193 CA CA B 601 1555 1555 2.50 LINK O LYS B 195 CA CA B 601 1555 1555 2.44 LINK OD1 ASP B 197 CA CA B 601 1555 1555 2.29 LINK OE1 GLU B 198 CA CA B 601 1555 1555 2.79 LINK OE2 GLU B 198 CA CA B 601 1555 1555 2.47 LINK OD1 ASP C 189 CA CA C 601 1555 1555 2.29 LINK OD1 ASN C 191 CA CA C 601 1555 1555 2.24 LINK OD1 ASN C 193 CA CA C 601 1555 1555 2.48 LINK O LYS C 195 CA CA C 601 1555 1555 2.43 LINK OD1 ASP C 197 CA CA C 601 1555 1555 2.27 LINK OE1 GLU C 198 CA CA C 601 1555 1555 2.51 LINK OE2 GLU C 198 CA CA C 601 1555 1555 2.80 LINK OD1 ASP D 189 CA CA D 601 1555 1555 2.27 LINK OD1 ASN D 191 CA CA D 601 1555 1555 2.25 LINK OD1 ASN D 193 CA CA D 601 1555 1555 2.58 LINK O LYS D 195 CA CA D 601 1555 1555 2.41 LINK OD1 ASP D 197 CA CA D 601 1555 1555 2.27 LINK OE1 GLU D 198 CA CA D 601 1555 1555 2.74 LINK OE2 GLU D 198 CA CA D 601 1555 1555 2.53 CRYST1 49.741 69.208 165.967 89.99 90.04 90.03 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020104 0.000012 0.000015 0.00000 SCALE2 0.000000 0.014449 -0.000003 0.00000 SCALE3 0.000000 0.000000 0.006025 0.00000