HEADER TRANSFERASE 27-JUN-17 5XVF TITLE CRYSTAL STRUCTURE OF PAK4 IN COMPLEX WITH INHIBITOR CZH062 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PAK 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PAK4 KINASE DOMAIN (UNP RESIDUES 300-588); COMPND 5 SYNONYM: P21-ACTIVATED KINASE 4,PAK-4; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PAK4, KIAA1142; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSUMOH10 KEYWDS ATP BINDING POCKET, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.ZHAO,H.LI REVDAT 2 22-NOV-23 5XVF 1 REMARK REVDAT 1 07-FEB-18 5XVF 0 JRNL AUTH C.HAO,F.ZHAO,H.SONG,J.GUO,X.LI,X.JIANG,R.HUAN,S.SONG, JRNL AUTH 2 Q.ZHANG,R.WANG,K.WANG,Y.PANG,T.LIU,T.LU,W.HUANG,J.WANG, JRNL AUTH 3 B.LIN,Z.HE,H.LI,F.LI,D.ZHAO,M.CHENG JRNL TITL STRUCTURE-BASED DESIGN OF JRNL TITL 2 6-CHLORO-4-AMINOQUINAZOLINE-2-CARBOXAMIDE DERIVATIVES AS JRNL TITL 3 POTENT AND SELECTIVE P21-ACTIVATED KINASE 4 (PAK4) JRNL TITL 4 INHIBITORS. JRNL REF J. MED. CHEM. V. 61 265 2018 JRNL REFN ISSN 1520-4804 JRNL PMID 29190083 JRNL DOI 10.1021/ACS.JMEDCHEM.7B01342 REMARK 2 REMARK 2 RESOLUTION. 2.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2689 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 12003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 605 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.1967 - 4.2124 1.00 3007 158 0.1780 0.2244 REMARK 3 2 4.2124 - 3.3442 1.00 2838 157 0.1975 0.2569 REMARK 3 3 3.3442 - 2.9217 1.00 2799 146 0.2194 0.2935 REMARK 3 4 2.9217 - 2.6546 0.99 2754 144 0.2336 0.3317 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 65.77 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2364 REMARK 3 ANGLE : 1.044 3206 REMARK 3 CHIRALITY : 0.055 360 REMARK 3 PLANARITY : 0.007 410 REMARK 3 DIHEDRAL : 19.063 1447 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 299 THROUGH 372 ) REMARK 3 ORIGIN FOR THE GROUP (A): 83.8039 38.1367 203.2736 REMARK 3 T TENSOR REMARK 3 T11: 0.5621 T22: 0.3072 REMARK 3 T33: 0.4717 T12: 0.0790 REMARK 3 T13: -0.0502 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 0.9131 L22: 3.0025 REMARK 3 L33: 1.6762 L12: 0.9369 REMARK 3 L13: -0.4786 L23: 1.9199 REMARK 3 S TENSOR REMARK 3 S11: -0.0609 S12: -0.0095 S13: 0.0555 REMARK 3 S21: 0.3049 S22: -0.0347 S23: -0.4271 REMARK 3 S31: -0.1374 S32: 0.0401 S33: -0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 373 THROUGH 453 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.8014 33.8379 192.8540 REMARK 3 T TENSOR REMARK 3 T11: 0.4261 T22: 0.3316 REMARK 3 T33: 0.3979 T12: 0.0889 REMARK 3 T13: 0.0106 T23: -0.0853 REMARK 3 L TENSOR REMARK 3 L11: 2.1908 L22: 0.7905 REMARK 3 L33: 1.7506 L12: 1.6789 REMARK 3 L13: 3.0948 L23: 0.4771 REMARK 3 S TENSOR REMARK 3 S11: 0.0895 S12: 0.0284 S13: -0.0591 REMARK 3 S21: 0.1254 S22: -0.0613 S23: -0.0600 REMARK 3 S31: 0.2239 S32: -0.2052 S33: -0.0025 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 454 THROUGH 542 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.7274 41.8684 177.9193 REMARK 3 T TENSOR REMARK 3 T11: 0.5299 T22: 0.5758 REMARK 3 T33: 0.4528 T12: -0.1143 REMARK 3 T13: -0.1822 T23: 0.0313 REMARK 3 L TENSOR REMARK 3 L11: 2.1327 L22: 0.9955 REMARK 3 L33: 1.3397 L12: 1.2237 REMARK 3 L13: 2.2050 L23: 0.0773 REMARK 3 S TENSOR REMARK 3 S11: -0.5750 S12: 0.8627 S13: 0.2237 REMARK 3 S21: -0.0327 S22: 0.1709 S23: 0.2066 REMARK 3 S31: -0.5148 S32: 0.6848 S33: -0.0350 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 543 THROUGH 588 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.6035 35.0757 179.8942 REMARK 3 T TENSOR REMARK 3 T11: 0.5556 T22: 0.5104 REMARK 3 T33: 0.5969 T12: 0.1690 REMARK 3 T13: -0.1899 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 1.6912 L22: 0.8950 REMARK 3 L33: 1.5457 L12: 1.7051 REMARK 3 L13: 1.5525 L23: 0.8614 REMARK 3 S TENSOR REMARK 3 S11: -0.4362 S12: 0.1140 S13: 0.1774 REMARK 3 S21: 0.0323 S22: -0.0736 S23: -0.3560 REMARK 3 S31: -0.4823 S32: -0.5237 S33: -0.0427 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XVF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1300004238. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2818 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12074 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.00 REMARK 200 R MERGE FOR SHELL (I) : 1.07500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 2J0I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 25% PEG3350., REMARK 280 VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.43150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.70200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.70200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.21575 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.70200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.70200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 135.64725 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.70200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.70200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.21575 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.70200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.70200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 135.64725 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 90.43150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 472 C LYS A 473 N 0.235 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 472 C - N - CA ANGL. DEV. = 15.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 343 -14.79 -159.87 REMARK 500 GLN A 358 -71.38 -48.55 REMARK 500 TYR A 382 -66.39 -107.67 REMARK 500 ASP A 440 50.10 -143.07 REMARK 500 SER A 488 0.36 -69.15 REMARK 500 PRO A 532 166.25 -47.13 REMARK 500 ASN A 537 37.71 -73.00 REMARK 500 LEU A 553 42.63 -87.82 REMARK 500 LYS A 574 -6.80 -59.74 REMARK 500 PRO A 583 38.41 -75.45 REMARK 500 MET A 585 -96.62 -75.73 REMARK 500 GLN A 587 26.25 -141.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG A 471 ARG A 472 -128.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG A 472 19.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8FR A 601 DBREF 5XVF A 300 588 UNP O96013 PAK4_HUMAN 300 588 SEQADV 5XVF SER A 299 UNP O96013 EXPRESSION TAG SEQRES 1 A 290 SER SER HIS GLU GLN PHE ARG ALA ALA LEU GLN LEU VAL SEQRES 2 A 290 VAL ASP PRO GLY ASP PRO ARG SER TYR LEU ASP ASN PHE SEQRES 3 A 290 ILE LYS ILE GLY GLU GLY SER THR GLY ILE VAL CYS ILE SEQRES 4 A 290 ALA THR VAL ARG SER SER GLY LYS LEU VAL ALA VAL LYS SEQRES 5 A 290 LYS MET ASP LEU ARG LYS GLN GLN ARG ARG GLU LEU LEU SEQRES 6 A 290 PHE ASN GLU VAL VAL ILE MET ARG ASP TYR GLN HIS GLU SEQRES 7 A 290 ASN VAL VAL GLU MET TYR ASN SER TYR LEU VAL GLY ASP SEQRES 8 A 290 GLU LEU TRP VAL VAL MET GLU PHE LEU GLU GLY GLY ALA SEQRES 9 A 290 LEU THR ASP ILE VAL THR HIS THR ARG MET ASN GLU GLU SEQRES 10 A 290 GLN ILE ALA ALA VAL CYS LEU ALA VAL LEU GLN ALA LEU SEQRES 11 A 290 SER VAL LEU HIS ALA GLN GLY VAL ILE HIS ARG ASP ILE SEQRES 12 A 290 LYS SER ASP SER ILE LEU LEU THR HIS ASP GLY ARG VAL SEQRES 13 A 290 LYS LEU SER ASP PHE GLY PHE CYS ALA GLN VAL SER LYS SEQRES 14 A 290 GLU VAL PRO ARG ARG LYS SEP LEU VAL GLY THR PRO TYR SEQRES 15 A 290 TRP MET ALA PRO GLU LEU ILE SER ARG LEU PRO TYR GLY SEQRES 16 A 290 PRO GLU VAL ASP ILE TRP SER LEU GLY ILE MET VAL ILE SEQRES 17 A 290 GLU MET VAL ASP GLY GLU PRO PRO TYR PHE ASN GLU PRO SEQRES 18 A 290 PRO LEU LYS ALA MET LYS MET ILE ARG ASP ASN LEU PRO SEQRES 19 A 290 PRO ARG LEU LYS ASN LEU HIS LYS VAL SER PRO SER LEU SEQRES 20 A 290 LYS GLY PHE LEU ASP ARG LEU LEU VAL ARG ASP PRO ALA SEQRES 21 A 290 GLN ARG ALA THR ALA ALA GLU LEU LEU LYS HIS PRO PHE SEQRES 22 A 290 LEU ALA LYS ALA GLY PRO PRO ALA SER ILE VAL PRO LEU SEQRES 23 A 290 MET ARG GLN ASN MODRES 5XVF SEP A 474 SER MODIFIED RESIDUE HET SEP A 474 10 HET 8FR A 601 25 HETNAM SEP PHOSPHOSERINE HETNAM 8FR 2-(4-AZANYLPIPERIDIN-1-YL)-6-CHLORANYL-N-(1- HETNAM 2 8FR METHYLIMIDAZOL-4-YL)QUINAZOLIN-4-AMINE HETSYN SEP PHOSPHONOSERINE FORMUL 1 SEP C3 H8 N O6 P FORMUL 2 8FR C17 H20 CL N7 FORMUL 3 HOH *7(H2 O) HELIX 1 AA1 SER A 300 GLN A 309 1 10 HELIX 2 AA2 ASP A 316 SER A 319 5 4 HELIX 3 AA3 ARG A 359 GLU A 361 5 3 HELIX 4 AA4 LEU A 362 TYR A 373 1 12 HELIX 5 AA5 ALA A 402 THR A 408 1 7 HELIX 6 AA6 ASN A 413 GLN A 434 1 22 HELIX 7 AA7 LYS A 442 ASP A 444 5 3 HELIX 8 AA8 THR A 478 MET A 482 5 5 HELIX 9 AA9 ALA A 483 SER A 488 1 6 HELIX 10 AB1 PRO A 494 GLY A 511 1 18 HELIX 11 AB2 PRO A 519 ASN A 530 1 12 HELIX 12 AB3 ASN A 537 VAL A 541 5 5 HELIX 13 AB4 SER A 542 LEU A 553 1 12 HELIX 14 AB5 THR A 562 LEU A 567 1 6 HELIX 15 AB6 LYS A 568 ALA A 575 5 8 HELIX 16 AB7 PRO A 577 VAL A 582 5 6 SHEET 1 AA1 5 LEU A 321 GLU A 329 0 SHEET 2 AA1 5 ILE A 334 VAL A 340 -1 O VAL A 335 N ILE A 327 SHEET 3 AA1 5 LEU A 346 ASP A 353 -1 O VAL A 349 N CYS A 336 SHEET 4 AA1 5 GLU A 390 GLU A 396 -1 O MET A 395 N ALA A 348 SHEET 5 AA1 5 MET A 381 VAL A 387 -1 N VAL A 387 O GLU A 390 SHEET 1 AA2 2 VAL A 436 ILE A 437 0 SHEET 2 AA2 2 ALA A 463 GLN A 464 -1 O ALA A 463 N ILE A 437 SHEET 1 AA3 2 ILE A 446 LEU A 448 0 SHEET 2 AA3 2 VAL A 454 LEU A 456 -1 O LYS A 455 N LEU A 447 LINK C LYS A 473 N SEP A 474 1555 1555 1.34 LINK C SEP A 474 N LEU A 475 1555 1555 1.34 SITE 1 AC1 10 ILE A 327 GLU A 329 ALA A 348 MET A 395 SITE 2 AC1 10 GLU A 396 LEU A 398 GLU A 399 GLY A 401 SITE 3 AC1 10 ASP A 444 LEU A 447 CRYST1 65.404 65.404 180.863 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015290 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015290 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005529 0.00000