HEADER TRANSFERASE/TRANSFERASE INHIBITOR 11-JUL-17 5XYZ TITLE THE STRUCTURE OF HUMAN BTK KINASE DOMAIN IN COMPLEX WITH A COVALENT TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE BTK; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 393-656; COMPND 5 SYNONYM: AGAMMAGLOBULINEMIA TYROSINE KINASE,ATK,B-CELL PROGENITOR COMPND 6 KINASE,BPK,BRUTON TYROSINE KINASE; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BTK, AGMX1, ATK, BPK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BTK, COVALENT INHIBITOR, TRANSFERASE, TRANSFERASE-TRANSFERASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.L.WANG,Y.Z.SUN,R.CAO,D.LIU,Y.T.XIE,L.LI,X.B.QI,N.HUANG REVDAT 2 22-NOV-23 5XYZ 1 REMARK REVDAT 1 23-MAY-18 5XYZ 0 JRNL AUTH Y.WANG,Y.SUN,R.CAO,D.LIU,Y.XIE,L.LI,X.QI,N.HUANG JRNL TITL IN SILICO IDENTIFICATION OF A NOVEL HINGE-BINDING SCAFFOLD JRNL TITL 2 FOR KINASE INHIBITOR DISCOVERY. JRNL REF J. MED. CHEM. V. 60 8552 2017 JRNL REFN ISSN 1520-4804 JRNL PMID 28945083 JRNL DOI 10.1021/ACS.JMEDCHEM.7B01075 REMARK 2 REMARK 2 RESOLUTION. 2.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0123 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 17575 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.268 REMARK 3 R VALUE (WORKING SET) : 0.265 REMARK 3 FREE R VALUE : 0.326 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 898 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.64 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.71 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1079 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.4060 REMARK 3 BIN FREE R VALUE SET COUNT : 50 REMARK 3 BIN FREE R VALUE : 0.4030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3758 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.16000 REMARK 3 B22 (A**2) : 6.57000 REMARK 3 B33 (A**2) : -2.93000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.99000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.117 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.420 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.402 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.744 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.906 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.854 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4082 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3842 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5502 ; 1.537 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8834 ; 1.054 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 474 ; 7.904 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 188 ;36.548 ;23.723 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 740 ;18.291 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;14.033 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 584 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4480 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 956 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1908 ; 5.405 ; 6.849 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1907 ; 5.402 ; 6.848 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2372 ; 8.869 ;10.256 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2373 ; 8.868 ;10.256 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2174 ; 4.901 ; 7.356 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2175 ; 4.900 ; 7.355 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3129 ; 7.958 ;10.814 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4683 ;12.919 ;54.606 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4684 ;12.917 ;54.608 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5XYZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1300004351. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18634 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.640 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.93 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5VGO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M LISO4, 0.1M CITRIC ACID PH 5.5, REMARK 280 6% PEG 10000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.80000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 392 REMARK 465 GLY A 393 REMARK 465 GLY A 409 REMARK 465 THR A 410 REMARK 465 GLY A 411 REMARK 465 GLN A 412 REMARK 465 PHE A 413 REMARK 465 GLY A 414 REMARK 465 VAL A 415 REMARK 465 GLU A 434 REMARK 465 GLY A 435 REMARK 465 SER A 436 REMARK 465 GLU A 439 REMARK 465 PHE A 442 REMARK 465 ILE A 443 REMARK 465 MET A 489 REMARK 465 ARG A 490 REMARK 465 HIS A 491 REMARK 465 TYR A 545 REMARK 465 VAL A 546 REMARK 465 LEU A 547 REMARK 465 ASP A 548 REMARK 465 ASP A 549 REMARK 465 GLU A 550 REMARK 465 TYR A 551 REMARK 465 THR A 552 REMARK 465 SER A 553 REMARK 465 SER A 554 REMARK 465 VAL A 555 REMARK 465 GLY A 556 REMARK 465 SER A 557 REMARK 465 LYS A 558 REMARK 465 TYR A 571 REMARK 465 SER A 572 REMARK 465 LYS A 573 REMARK 465 GLY B 392 REMARK 465 GLY B 393 REMARK 465 GLY B 409 REMARK 465 THR B 410 REMARK 465 GLY B 411 REMARK 465 GLN B 412 REMARK 465 PHE B 413 REMARK 465 GLY B 414 REMARK 465 VAL B 415 REMARK 465 GLU B 434 REMARK 465 GLY B 435 REMARK 465 SER B 436 REMARK 465 PHE B 442 REMARK 465 TYR B 545 REMARK 465 VAL B 546 REMARK 465 LEU B 547 REMARK 465 ASP B 548 REMARK 465 ASP B 549 REMARK 465 GLU B 550 REMARK 465 TYR B 551 REMARK 465 THR B 552 REMARK 465 SER B 553 REMARK 465 SER B 554 REMARK 465 VAL B 555 REMARK 465 GLY B 556 REMARK 465 SER B 557 REMARK 465 LYS B 558 REMARK 465 TYR B 571 REMARK 465 SER B 572 REMARK 465 LYS B 573 REMARK 465 PHE B 574 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 405 CG CD1 CD2 REMARK 470 GLU A 407 CG CD OE1 OE2 REMARK 470 LYS A 433 CG CD CE NZ REMARK 470 LYS A 466 CG CD CE NZ REMARK 470 GLN A 467 CG CD OE1 NE2 REMARK 470 ARG A 520 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 559 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR A 617 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 407 CG CD OE1 OE2 REMARK 470 LYS B 433 CG CD CE NZ REMARK 470 LYS B 466 CG CD CE NZ REMARK 470 GLN B 467 CG CD OE1 NE2 REMARK 470 ARG B 468 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 520 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 559 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR B 617 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 406 139.98 177.39 REMARK 500 GLN A 424 -70.26 -56.95 REMARK 500 ARG A 520 -27.42 90.65 REMARK 500 SER A 576 -44.24 -28.52 REMARK 500 MET A 596 109.16 -59.08 REMARK 500 HIS A 620 -51.69 -6.08 REMARK 500 LYS A 645 -53.94 -26.91 REMARK 500 ARG B 422 18.38 56.95 REMARK 500 SER B 453 115.23 -164.24 REMARK 500 HIS B 454 129.85 -172.28 REMARK 500 LYS B 466 -37.14 -34.56 REMARK 500 PRO B 469 -165.42 -76.49 REMARK 500 ARG B 520 -54.65 106.37 REMARK 500 HIS B 620 -61.61 -18.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN A 424 TYR A 425 -147.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GYL A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GYL B 701 and CYS B REMARK 800 481 DBREF 5XYZ A 393 656 UNP Q06187 BTK_HUMAN 393 656 DBREF 5XYZ B 393 656 UNP Q06187 BTK_HUMAN 393 656 SEQADV 5XYZ GLY A 392 UNP Q06187 EXPRESSION TAG SEQADV 5XYZ GLY B 392 UNP Q06187 EXPRESSION TAG SEQRES 1 A 265 GLY GLY SER TRP GLU ILE ASP PRO LYS ASP LEU THR PHE SEQRES 2 A 265 LEU LYS GLU LEU GLY THR GLY GLN PHE GLY VAL VAL LYS SEQRES 3 A 265 TYR GLY LYS TRP ARG GLY GLN TYR ASP VAL ALA ILE LYS SEQRES 4 A 265 MET ILE LYS GLU GLY SER MET SER GLU ASP GLU PHE ILE SEQRES 5 A 265 GLU GLU ALA LYS VAL MET MET ASN LEU SER HIS GLU LYS SEQRES 6 A 265 LEU VAL GLN LEU TYR GLY VAL CYS THR LYS GLN ARG PRO SEQRES 7 A 265 ILE PHE ILE ILE THR GLU TYR MET ALA ASN GLY CYS LEU SEQRES 8 A 265 LEU ASN TYR LEU ARG GLU MET ARG HIS ARG PHE GLN THR SEQRES 9 A 265 GLN GLN LEU LEU GLU MET CYS LYS ASP VAL CYS GLU ALA SEQRES 10 A 265 MET GLU TYR LEU GLU SER LYS GLN PHE LEU HIS ARG ASP SEQRES 11 A 265 LEU ALA ALA ARG ASN CYS LEU VAL ASN ASP GLN GLY VAL SEQRES 12 A 265 VAL LYS VAL SER ASP PHE GLY LEU SER ARG TYR VAL LEU SEQRES 13 A 265 ASP ASP GLU TYR THR SER SER VAL GLY SER LYS PHE PRO SEQRES 14 A 265 VAL ARG TRP SER PRO PRO GLU VAL LEU MET TYR SER LYS SEQRES 15 A 265 PHE SER SER LYS SER ASP ILE TRP ALA PHE GLY VAL LEU SEQRES 16 A 265 MET TRP GLU ILE TYR SER LEU GLY LYS MET PRO TYR GLU SEQRES 17 A 265 ARG PHE THR ASN SER GLU THR ALA GLU HIS ILE ALA GLN SEQRES 18 A 265 GLY LEU ARG LEU TYR ARG PRO HIS LEU ALA SER GLU LYS SEQRES 19 A 265 VAL TYR THR ILE MET TYR SER CYS TRP HIS GLU LYS ALA SEQRES 20 A 265 ASP GLU ARG PRO THR PHE LYS ILE LEU LEU SER ASN ILE SEQRES 21 A 265 LEU ASP VAL MET ASP SEQRES 1 B 265 GLY GLY SER TRP GLU ILE ASP PRO LYS ASP LEU THR PHE SEQRES 2 B 265 LEU LYS GLU LEU GLY THR GLY GLN PHE GLY VAL VAL LYS SEQRES 3 B 265 TYR GLY LYS TRP ARG GLY GLN TYR ASP VAL ALA ILE LYS SEQRES 4 B 265 MET ILE LYS GLU GLY SER MET SER GLU ASP GLU PHE ILE SEQRES 5 B 265 GLU GLU ALA LYS VAL MET MET ASN LEU SER HIS GLU LYS SEQRES 6 B 265 LEU VAL GLN LEU TYR GLY VAL CYS THR LYS GLN ARG PRO SEQRES 7 B 265 ILE PHE ILE ILE THR GLU TYR MET ALA ASN GLY CYS LEU SEQRES 8 B 265 LEU ASN TYR LEU ARG GLU MET ARG HIS ARG PHE GLN THR SEQRES 9 B 265 GLN GLN LEU LEU GLU MET CYS LYS ASP VAL CYS GLU ALA SEQRES 10 B 265 MET GLU TYR LEU GLU SER LYS GLN PHE LEU HIS ARG ASP SEQRES 11 B 265 LEU ALA ALA ARG ASN CYS LEU VAL ASN ASP GLN GLY VAL SEQRES 12 B 265 VAL LYS VAL SER ASP PHE GLY LEU SER ARG TYR VAL LEU SEQRES 13 B 265 ASP ASP GLU TYR THR SER SER VAL GLY SER LYS PHE PRO SEQRES 14 B 265 VAL ARG TRP SER PRO PRO GLU VAL LEU MET TYR SER LYS SEQRES 15 B 265 PHE SER SER LYS SER ASP ILE TRP ALA PHE GLY VAL LEU SEQRES 16 B 265 MET TRP GLU ILE TYR SER LEU GLY LYS MET PRO TYR GLU SEQRES 17 B 265 ARG PHE THR ASN SER GLU THR ALA GLU HIS ILE ALA GLN SEQRES 18 B 265 GLY LEU ARG LEU TYR ARG PRO HIS LEU ALA SER GLU LYS SEQRES 19 B 265 VAL TYR THR ILE MET TYR SER CYS TRP HIS GLU LYS ALA SEQRES 20 B 265 ASP GLU ARG PRO THR PHE LYS ILE LEU LEU SER ASN ILE SEQRES 21 B 265 LEU ASP VAL MET ASP HET GYL A 701 26 HET GYL B 701 26 HETNAM GYL N-[3-(5-{[(2-CHLORO-6-FLUOROPHENYL)METHYL]AMINO}-1H-1, HETNAM 2 GYL 2,4-TRIAZOL-3-YL)PHENYL]PROPANAMIDE FORMUL 3 GYL 2(C18 H17 CL F N5 O) HELIX 1 AA1 ASP A 398 LYS A 400 5 3 HELIX 2 AA2 GLU A 445 LEU A 452 1 8 HELIX 3 AA3 LEU A 482 GLU A 488 1 7 HELIX 4 AA4 GLN A 494 LYS A 515 1 22 HELIX 5 AA5 ALA A 523 ASN A 526 5 4 HELIX 6 AA6 PRO A 560 SER A 564 5 5 HELIX 7 AA7 PRO A 565 MET A 570 1 6 HELIX 8 AA8 SER A 575 SER A 592 1 18 HELIX 9 AA9 THR A 602 GLY A 613 1 12 HELIX 10 AB1 SER A 623 CYS A 633 1 11 HELIX 11 AB2 THR A 643 ASP A 656 1 14 HELIX 12 AB3 ASP B 398 LEU B 402 5 5 HELIX 13 AB4 ASP B 440 GLU B 441 5 2 HELIX 14 AB5 ILE B 443 ILE B 443 5 1 HELIX 15 AB6 GLU B 444 LEU B 452 1 9 HELIX 16 AB7 LEU B 482 MET B 489 1 8 HELIX 17 AB8 GLN B 494 SER B 514 1 21 HELIX 18 AB9 PRO B 560 SER B 564 5 5 HELIX 19 AC1 PRO B 565 MET B 570 1 6 HELIX 20 AC2 SER B 576 SER B 592 1 17 HELIX 21 AC3 THR B 602 GLN B 612 1 11 HELIX 22 AC4 SER B 623 SER B 632 1 10 HELIX 23 AC5 CYS B 633 HIS B 635 5 3 HELIX 24 AC6 LYS B 637 ARG B 641 5 5 HELIX 25 AC7 THR B 643 ASP B 656 1 14 SHEET 1 AA1 5 LEU A 402 LYS A 406 0 SHEET 2 AA1 5 LYS A 417 TRP A 421 -1 O TYR A 418 N LEU A 405 SHEET 3 AA1 5 TYR A 425 MET A 431 -1 O ILE A 429 N LYS A 417 SHEET 4 AA1 5 PHE A 471 GLU A 475 -1 O ILE A 472 N LYS A 430 SHEET 5 AA1 5 LEU A 460 CYS A 464 -1 N TYR A 461 O ILE A 473 SHEET 1 AA2 3 GLY A 480 CYS A 481 0 SHEET 2 AA2 3 LEU A 528 VAL A 529 -1 O VAL A 529 N GLY A 480 SHEET 3 AA2 3 VAL A 535 LYS A 536 -1 O LYS A 536 N LEU A 528 SHEET 1 AA3 4 LYS B 417 TRP B 421 0 SHEET 2 AA3 4 TYR B 425 MET B 431 -1 O ILE B 429 N LYS B 417 SHEET 3 AA3 4 PHE B 471 GLU B 475 -1 O ILE B 472 N LYS B 430 SHEET 4 AA3 4 LEU B 460 VAL B 463 -1 N GLY B 462 O ILE B 473 SHEET 1 AA4 3 GLY B 480 CYS B 481 0 SHEET 2 AA4 3 CYS B 527 VAL B 529 -1 O VAL B 529 N GLY B 480 SHEET 3 AA4 3 VAL B 535 VAL B 537 -1 O LYS B 536 N LEU B 528 LINK SG CYS A 481 C37 GYL A 701 1555 1555 1.63 LINK SG CYS B 481 C37 GYL B 701 1555 1555 1.61 CISPEP 1 ARG A 468 PRO A 469 0 -1.03 CISPEP 2 ARG B 468 PRO B 469 0 -2.99 SITE 1 AC1 10 VAL A 416 ALA A 428 LYS A 430 THR A 474 SITE 2 AC1 10 GLU A 475 MET A 477 GLY A 480 CYS A 481 SITE 3 AC1 10 LEU A 528 SER A 538 SITE 1 AC2 17 VAL B 416 ALA B 428 LYS B 430 ILE B 472 SITE 2 AC2 17 THR B 474 GLU B 475 MET B 477 GLY B 480 SITE 3 AC2 17 LEU B 482 LEU B 483 ASN B 484 TYR B 485 SITE 4 AC2 17 ARG B 525 CYS B 527 LEU B 528 SER B 538 SITE 5 AC2 17 PHE B 540 CRYST1 59.590 53.600 101.635 90.00 100.04 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016781 0.000000 0.002972 0.00000 SCALE2 0.000000 0.018657 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009992 0.00000