HEADER TOXIN 11-JUL-17 5XZ0 TITLE STAPHYLOCOCCAL ENTEROTOXIN B (SEB) MUTANT S19 - N23A, Y90A, R110A AND TITLE 2 F177A COMPND MOL_ID: 1; COMPND 2 MOLECULE: STAPHYLOCOCCAL ENTEROTOXIN B; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 29-263; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS (STRAIN COL); SOURCE 3 ORGANISM_TAXID: 93062; SOURCE 4 STRAIN: COL; SOURCE 5 GENE: SEB, SACOL0907; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: BL21 KEYWDS STAPHYLOCOCCAL AUREUS, ENTEROTOXIN, SEB, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR W.H.JEONG,D.H.SONG,G.H.HUR,S.T.JEONG REVDAT 3 22-NOV-23 5XZ0 1 REMARK REVDAT 2 15-NOV-17 5XZ0 1 JRNL REVDAT 1 01-NOV-17 5XZ0 0 JRNL AUTH W.H.JEONG,D.H.SONG,G.H.HUR,S.T.JEONG JRNL TITL STRUCTURE OF THE STAPHYLOCOCCAL ENTEROTOXIN B VACCINE JRNL TITL 2 CANDIDATE S19 SHOWING ELIMINATED SUPERANTIGEN ACTIVITY JRNL REF ACTA CRYSTALLOGR F STRUCT V. 73 595 2017 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 2053-230X JRNL PMID 29095152 JRNL DOI 10.1107/S2053230X17014844 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 15415 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1548 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.1569 - 6.6670 0.99 1344 156 0.2343 0.2867 REMARK 3 2 6.6670 - 5.2954 1.00 1281 145 0.2057 0.2201 REMARK 3 3 5.2954 - 4.6270 1.00 1276 142 0.1699 0.2067 REMARK 3 4 4.6270 - 4.2044 1.00 1278 144 0.1644 0.1792 REMARK 3 5 4.2044 - 3.9033 1.00 1234 135 0.1735 0.2234 REMARK 3 6 3.9033 - 3.6734 1.00 1246 140 0.1961 0.2148 REMARK 3 7 3.6734 - 3.4895 1.00 1232 136 0.2020 0.2644 REMARK 3 8 3.4895 - 3.3377 1.00 1257 136 0.2197 0.2945 REMARK 3 9 3.3377 - 3.2092 1.00 1237 141 0.2376 0.2718 REMARK 3 10 3.2092 - 3.0985 1.00 1236 139 0.2501 0.3084 REMARK 3 11 3.0985 - 3.0017 0.99 1246 134 0.2676 0.3323 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3747 REMARK 3 ANGLE : 0.500 5045 REMARK 3 CHIRALITY : 0.043 528 REMARK 3 PLANARITY : 0.004 646 REMARK 3 DIHEDRAL : 2.042 2266 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.3912 -11.9019 16.0777 REMARK 3 T TENSOR REMARK 3 T11: 0.2712 T22: 0.1588 REMARK 3 T33: 0.2740 T12: 0.0579 REMARK 3 T13: -0.0624 T23: 0.0190 REMARK 3 L TENSOR REMARK 3 L11: 3.5621 L22: 1.5627 REMARK 3 L33: 1.8133 L12: 0.9109 REMARK 3 L13: -0.0457 L23: 0.0794 REMARK 3 S TENSOR REMARK 3 S11: -0.0544 S12: -0.4228 S13: 0.0929 REMARK 3 S21: 0.0617 S22: -0.0350 S23: -0.0505 REMARK 3 S31: 0.4838 S32: 0.2378 S33: 0.0324 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.4586 -9.8638 11.7600 REMARK 3 T TENSOR REMARK 3 T11: 0.2518 T22: 0.0725 REMARK 3 T33: 0.1942 T12: 0.0003 REMARK 3 T13: -0.0269 T23: -0.0448 REMARK 3 L TENSOR REMARK 3 L11: 4.2320 L22: 2.8197 REMARK 3 L33: 2.1620 L12: 1.7323 REMARK 3 L13: -0.1213 L23: -0.3873 REMARK 3 S TENSOR REMARK 3 S11: -0.0973 S12: -0.0203 S13: 0.4570 REMARK 3 S21: -0.0084 S22: 0.0142 S23: 0.3171 REMARK 3 S31: 0.1361 S32: -0.0628 S33: 0.1038 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.4293 -20.0180 14.6683 REMARK 3 T TENSOR REMARK 3 T11: 0.3325 T22: 0.2507 REMARK 3 T33: 0.2675 T12: -0.1166 REMARK 3 T13: 0.0010 T23: -0.0316 REMARK 3 L TENSOR REMARK 3 L11: 4.2156 L22: 2.2903 REMARK 3 L33: 0.6238 L12: 0.6833 REMARK 3 L13: -0.4198 L23: -0.4211 REMARK 3 S TENSOR REMARK 3 S11: 0.0336 S12: -0.3534 S13: -0.6250 REMARK 3 S21: -0.0279 S22: -0.1534 S23: -0.1601 REMARK 3 S31: 0.7371 S32: -0.1781 S33: -0.0913 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.9133 -45.8895 16.0578 REMARK 3 T TENSOR REMARK 3 T11: 0.1784 T22: 0.2279 REMARK 3 T33: 0.2208 T12: -0.0833 REMARK 3 T13: -0.0207 T23: 0.0413 REMARK 3 L TENSOR REMARK 3 L11: 1.7181 L22: 4.1711 REMARK 3 L33: 2.6787 L12: -1.0158 REMARK 3 L13: -0.0744 L23: 0.4107 REMARK 3 S TENSOR REMARK 3 S11: -0.0789 S12: -0.1010 S13: -0.0968 REMARK 3 S21: 0.3455 S22: -0.0028 S23: 0.0097 REMARK 3 S31: 0.1374 S32: -0.3621 S33: 0.0587 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 78 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.8957 -51.2837 12.8047 REMARK 3 T TENSOR REMARK 3 T11: 0.2659 T22: 0.1448 REMARK 3 T33: 0.2318 T12: 0.0189 REMARK 3 T13: 0.0100 T23: -0.0213 REMARK 3 L TENSOR REMARK 3 L11: 4.2197 L22: 2.8449 REMARK 3 L33: 4.1160 L12: 0.0357 REMARK 3 L13: 0.2578 L23: 1.4359 REMARK 3 S TENSOR REMARK 3 S11: -0.0702 S12: -0.2718 S13: -0.2360 REMARK 3 S21: -0.4823 S22: -0.0437 S23: -0.3511 REMARK 3 S31: 0.3571 S32: -0.3244 S33: 0.1439 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 121 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.9053 -30.7025 11.1159 REMARK 3 T TENSOR REMARK 3 T11: 0.1697 T22: 0.2360 REMARK 3 T33: 0.1975 T12: 0.1154 REMARK 3 T13: -0.0327 T23: 0.0785 REMARK 3 L TENSOR REMARK 3 L11: 3.2452 L22: 4.1716 REMARK 3 L33: 1.9300 L12: -1.1702 REMARK 3 L13: -0.7904 L23: 0.2387 REMARK 3 S TENSOR REMARK 3 S11: 0.0582 S12: -0.0272 S13: 0.3022 REMARK 3 S21: 0.0341 S22: -0.0906 S23: -0.2738 REMARK 3 S31: -0.2880 S32: -0.0258 S33: 0.0741 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 200 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.1445 -37.2658 16.5044 REMARK 3 T TENSOR REMARK 3 T11: 0.2764 T22: 0.2742 REMARK 3 T33: 0.2449 T12: 0.0177 REMARK 3 T13: 0.0036 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 1.8597 L22: 3.5426 REMARK 3 L33: 1.0011 L12: -0.8747 REMARK 3 L13: 0.7251 L23: 0.5209 REMARK 3 S TENSOR REMARK 3 S11: -0.1625 S12: -0.1559 S13: -0.0930 REMARK 3 S21: 0.4596 S22: -0.1382 S23: 0.6048 REMARK 3 S31: -0.1938 S32: -0.7247 S33: 0.0600 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 9 THROUGH 53 OR RESID REMARK 3 55 THROUGH 91 OR RESID 108 THROUGH 140 OR REMARK 3 RESID 142 THROUGH 152 OR RESID 154 REMARK 3 THROUGH 175 OR RESID 177 OR RESID 179 REMARK 3 THROUGH 192 OR RESID 194 THROUGH 206 OR REMARK 3 RESID 208 THROUGH 236)) REMARK 3 SELECTION : (CHAIN B AND (RESID 9 THROUGH 53 OR RESID REMARK 3 55 THROUGH 91 OR RESID 108 THROUGH 140 OR REMARK 3 RESID 142 THROUGH 152 OR RESID 154 REMARK 3 THROUGH 175 OR RESID 177 OR RESID 179 REMARK 3 THROUGH 192 OR RESID 194 THROUGH 206 OR REMARK 3 RESID 208 THROUGH 236)) REMARK 3 ATOM PAIRS NUMBER : 1692 REMARK 3 RMSD : 0.015 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XZ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1300004323. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15421 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.001 REMARK 200 RESOLUTION RANGE LOW (A) : 41.153 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4C56, 4RGM REMARK 200 REMARK 200 REMARK: CUBIC, 0.05MM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M POTASSIUM FLUORIDE 20% W/V PEG REMARK 280 3350, EVAPORATION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y+1/2,-Z REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 87.28250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 87.31500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 87.28250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 87.31500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 87.28250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 87.31500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 87.28250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 87.31500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 SG CYS B 93 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 95 REMARK 465 SER A 96 REMARK 465 LYS A 97 REMARK 465 LYS A 98 REMARK 465 THR A 99 REMARK 465 ASN A 100 REMARK 465 ASP A 101 REMARK 465 ILE A 102 REMARK 465 ASN A 103 REMARK 465 SER A 104 REMARK 465 HIS A 105 REMARK 465 GLN A 106 REMARK 465 THR A 107 REMARK 465 PHE B 95 REMARK 465 SER B 96 REMARK 465 LYS B 97 REMARK 465 LYS B 98 REMARK 465 THR B 99 REMARK 465 ASN B 100 REMARK 465 ASP B 101 REMARK 465 ILE B 102 REMARK 465 ASN B 103 REMARK 465 SER B 104 REMARK 465 HIS B 105 REMARK 465 GLN B 106 REMARK 465 THR B 107 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CB CYS B 93 SG CYS B 93 3556 1.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS B 93 CA - CB - SG ANGL. DEV. = 10.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 37 61.30 63.44 REMARK 500 ASN A 70 -164.44 -125.86 REMARK 500 ASP A 139 15.94 59.95 REMARK 500 ASN A 179 173.10 64.96 REMARK 500 ASN A 192 -117.65 50.90 REMARK 500 ASN B 37 61.38 63.43 REMARK 500 ASN B 70 -164.72 -125.61 REMARK 500 ASN B 179 172.45 66.69 REMARK 500 ASN B 192 -120.59 56.01 REMARK 500 REMARK 500 REMARK: NULL DBREF1 5XZ0 A 2 236 UNP A0A0H2WZB2_STAAC DBREF2 5XZ0 A A0A0H2WZB2 29 263 DBREF1 5XZ0 B 2 236 UNP A0A0H2WZB2_STAAC DBREF2 5XZ0 B A0A0H2WZB2 29 263 SEQADV 5XZ0 ALA A 23 UNP A0A0H2WZB ASN 50 ENGINEERED MUTATION SEQADV 5XZ0 ALA A 90 UNP A0A0H2WZB TYR 117 ENGINEERED MUTATION SEQADV 5XZ0 ALA A 110 UNP A0A0H2WZB ARG 137 ENGINEERED MUTATION SEQADV 5XZ0 ALA A 177 UNP A0A0H2WZB PHE 204 ENGINEERED MUTATION SEQADV 5XZ0 ALA B 23 UNP A0A0H2WZB ASN 50 ENGINEERED MUTATION SEQADV 5XZ0 ALA B 90 UNP A0A0H2WZB TYR 117 ENGINEERED MUTATION SEQADV 5XZ0 ALA B 110 UNP A0A0H2WZB ARG 137 ENGINEERED MUTATION SEQADV 5XZ0 ALA B 177 UNP A0A0H2WZB PHE 204 ENGINEERED MUTATION SEQRES 1 A 235 SER GLN PRO ASP PRO LYS PRO ASP GLU LEU HIS LYS SER SEQRES 2 A 235 SER LYS PHE THR GLY LEU MET GLU ALA MET LYS VAL LEU SEQRES 3 A 235 TYR ASP ASP ASN HIS VAL SER ALA ILE ASN VAL LYS SER SEQRES 4 A 235 ILE ASP GLN PHE LEU TYR PHE ASP LEU ILE TYR SER ILE SEQRES 5 A 235 LYS ASP THR LYS LEU GLY ASN TYR ASP ASN VAL ARG VAL SEQRES 6 A 235 GLU PHE LYS ASN LYS ASP LEU ALA ASP LYS TYR LYS ASP SEQRES 7 A 235 LYS TYR VAL ASP VAL PHE GLY ALA ASN TYR ALA TYR GLN SEQRES 8 A 235 CYS TYR PHE SER LYS LYS THR ASN ASP ILE ASN SER HIS SEQRES 9 A 235 GLN THR ASP LYS ALA LYS THR CYS MET TYR GLY GLY VAL SEQRES 10 A 235 THR GLU HIS ASN GLY ASN GLN LEU ASP LYS TYR ARG SER SEQRES 11 A 235 ILE THR VAL ARG VAL PHE GLU ASP GLY LYS ASN LEU LEU SEQRES 12 A 235 SER PHE ASP VAL GLN THR ASN LYS LYS LYS VAL THR ALA SEQRES 13 A 235 GLN GLU LEU ASP TYR LEU THR ARG HIS TYR LEU VAL LYS SEQRES 14 A 235 ASN LYS LYS LEU TYR GLU ALA ASN ASN SER PRO TYR GLU SEQRES 15 A 235 THR GLY TYR ILE LYS PHE ILE GLU ASN GLU ASN SER PHE SEQRES 16 A 235 TRP TYR ASP MET MET PRO ALA PRO GLY ASP LYS PHE ASP SEQRES 17 A 235 GLN SER LYS TYR LEU MET MET TYR ASN ASP ASN LYS MET SEQRES 18 A 235 VAL ASP SER LYS ASP VAL LYS ILE GLU VAL TYR LEU THR SEQRES 19 A 235 THR SEQRES 1 B 235 SER GLN PRO ASP PRO LYS PRO ASP GLU LEU HIS LYS SER SEQRES 2 B 235 SER LYS PHE THR GLY LEU MET GLU ALA MET LYS VAL LEU SEQRES 3 B 235 TYR ASP ASP ASN HIS VAL SER ALA ILE ASN VAL LYS SER SEQRES 4 B 235 ILE ASP GLN PHE LEU TYR PHE ASP LEU ILE TYR SER ILE SEQRES 5 B 235 LYS ASP THR LYS LEU GLY ASN TYR ASP ASN VAL ARG VAL SEQRES 6 B 235 GLU PHE LYS ASN LYS ASP LEU ALA ASP LYS TYR LYS ASP SEQRES 7 B 235 LYS TYR VAL ASP VAL PHE GLY ALA ASN TYR ALA TYR GLN SEQRES 8 B 235 CYS TYR PHE SER LYS LYS THR ASN ASP ILE ASN SER HIS SEQRES 9 B 235 GLN THR ASP LYS ALA LYS THR CYS MET TYR GLY GLY VAL SEQRES 10 B 235 THR GLU HIS ASN GLY ASN GLN LEU ASP LYS TYR ARG SER SEQRES 11 B 235 ILE THR VAL ARG VAL PHE GLU ASP GLY LYS ASN LEU LEU SEQRES 12 B 235 SER PHE ASP VAL GLN THR ASN LYS LYS LYS VAL THR ALA SEQRES 13 B 235 GLN GLU LEU ASP TYR LEU THR ARG HIS TYR LEU VAL LYS SEQRES 14 B 235 ASN LYS LYS LEU TYR GLU ALA ASN ASN SER PRO TYR GLU SEQRES 15 B 235 THR GLY TYR ILE LYS PHE ILE GLU ASN GLU ASN SER PHE SEQRES 16 B 235 TRP TYR ASP MET MET PRO ALA PRO GLY ASP LYS PHE ASP SEQRES 17 B 235 GLN SER LYS TYR LEU MET MET TYR ASN ASP ASN LYS MET SEQRES 18 B 235 VAL ASP SER LYS ASP VAL LYS ILE GLU VAL TYR LEU THR SEQRES 19 B 235 THR FORMUL 3 HOH *34(H2 O) HELIX 1 AA1 LYS A 13 PHE A 17 5 5 HELIX 2 AA2 MET A 21 VAL A 26 1 6 HELIX 3 AA3 LEU A 27 ASP A 29 5 3 HELIX 4 AA4 ASN A 70 TYR A 77 1 8 HELIX 5 AA5 ALA A 157 LYS A 173 1 17 HELIX 6 AA6 ASP A 209 MET A 215 1 7 HELIX 7 AA7 MET A 216 ASN A 220 5 5 HELIX 8 AA8 LYS B 13 PHE B 17 5 5 HELIX 9 AA9 MET B 21 VAL B 26 1 6 HELIX 10 AB1 LEU B 27 ASP B 29 5 3 HELIX 11 AB2 ASN B 70 TYR B 77 1 8 HELIX 12 AB3 ALA B 157 LYS B 173 1 17 HELIX 13 AB4 ASP B 209 MET B 215 1 7 HELIX 14 AB5 MET B 216 ASN B 220 5 5 SHEET 1 AA1 3 VAL A 33 VAL A 38 0 SHEET 2 AA1 3 VAL A 82 GLY A 86 -1 O VAL A 82 N VAL A 38 SHEET 3 AA1 3 VAL A 118 GLU A 120 -1 O THR A 119 N ASP A 83 SHEET 1 AA2 3 ASP A 48 TYR A 51 0 SHEET 2 AA2 3 TYR A 61 GLU A 67 -1 O VAL A 64 N TYR A 51 SHEET 3 AA2 3 ALA A 110 TYR A 115 1 O THR A 112 N ARG A 65 SHEET 1 AA3 5 LYS A 141 LYS A 152 0 SHEET 2 AA3 5 GLN A 125 GLU A 138 -1 N VAL A 136 O LEU A 144 SHEET 3 AA3 5 VAL A 228 THR A 235 1 O LEU A 234 N PHE A 137 SHEET 4 AA3 5 THR A 184 GLU A 191 -1 N ILE A 190 O LYS A 229 SHEET 5 AA3 5 ASN A 194 ASP A 199 -1 O PHE A 196 N PHE A 189 SHEET 1 AA4 2 LYS A 154 THR A 156 0 SHEET 2 AA4 2 MET A 222 ASP A 224 -1 O VAL A 223 N VAL A 155 SHEET 1 AA5 3 VAL B 33 VAL B 38 0 SHEET 2 AA5 3 VAL B 82 GLY B 86 -1 O VAL B 82 N VAL B 38 SHEET 3 AA5 3 VAL B 118 GLU B 120 -1 O THR B 119 N ASP B 83 SHEET 1 AA6 3 ASP B 48 TYR B 51 0 SHEET 2 AA6 3 TYR B 61 GLU B 67 -1 O VAL B 64 N TYR B 51 SHEET 3 AA6 3 ALA B 110 TYR B 115 1 O THR B 112 N ARG B 65 SHEET 1 AA7 5 LYS B 141 LYS B 152 0 SHEET 2 AA7 5 GLN B 125 GLU B 138 -1 N VAL B 136 O LEU B 144 SHEET 3 AA7 5 VAL B 228 THR B 235 1 O LEU B 234 N PHE B 137 SHEET 4 AA7 5 THR B 184 GLU B 191 -1 N ILE B 190 O LYS B 229 SHEET 5 AA7 5 ASN B 194 ASP B 199 -1 O PHE B 196 N PHE B 189 SHEET 1 AA8 2 LYS B 154 THR B 156 0 SHEET 2 AA8 2 MET B 222 ASP B 224 -1 O VAL B 223 N VAL B 155 SSBOND 1 CYS A 93 CYS A 93 1555 4556 2.03 CRYST1 174.565 174.630 48.769 90.00 90.00 90.00 C 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005729 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005726 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020505 0.00000