HEADER IMMUNE SYSTEM/INHIBITOR 12-JUL-17 5XZB TITLE MOUSE CGAS BOUND TO THE INHIBITOR RU365 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC GMP-AMP SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 149-505; COMPND 5 SYNONYM: M-CGAS, 2'3'-CGAMP SYNTHASE, MAB-21 DOMAIN-CONTAINING COMPND 6 PROTEIN 1; COMPND 7 EC: 2.7.7.86; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: DNA (5'-D(*AP*AP*AP*TP*TP*GP*CP*CP*GP*AP*AP*GP*AP*CP*G)- COMPND 11 3'); COMPND 12 CHAIN: E; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: DNA (5'-D(P*CP*GP*TP*CP*TP*TP*CP*GP*GP*CP*AP*AP*TP*T)-3'); COMPND 16 CHAIN: F; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MB21D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 16 ORGANISM_COMMON: MOUSE; SOURCE 17 ORGANISM_TAXID: 10090 KEYWDS INHIBITOR, CGAS, STING, IMMUNE SYSTEM-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.VINCENT,C.ADURA,P.GAO,A.LUZ,L.LAMA,Y.ASANO,R.OKAMOTO,T.IMAEDA, AUTHOR 2 J.AIDA,K.ROTHAMEL,T.GOGAKOS,J.STEINBERG,S.REASONER,K.ASO,T.TUSCHL, AUTHOR 3 D.J.PATEL,J.F.GLICKMAN,M.ASCANO REVDAT 5 12-OCT-22 5XZB 1 REMARK REVDAT 4 01-JAN-20 5XZB 1 REMARK REVDAT 3 11-OCT-17 5XZB 1 JRNL REVDAT 2 13-SEP-17 5XZB 1 REMARK REVDAT 1 09-AUG-17 5XZB 0 JRNL AUTH J.VINCENT,C.ADURA,P.GAO,A.LUZ,L.LAMA,Y.ASANO,R.OKAMOTO, JRNL AUTH 2 T.IMAEDA,J.AIDA,K.ROTHAMEL,T.GOGAKOS,J.STEINBERG,S.REASONER, JRNL AUTH 3 K.ASO,T.TUSCHL,D.J.PATEL,J.F.GLICKMAN,M.ASCANO JRNL TITL SMALL MOLECULE INHIBITION OF CGAS REDUCES INTERFERON JRNL TITL 2 EXPRESSION IN PRIMARY MACROPHAGES FROM AUTOIMMUNE MICE. JRNL REF NAT COMMUN V. 8 750 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28963528 JRNL DOI 10.1038/S41467-017-00833-9 REMARK 2 REMARK 2 RESOLUTION. 2.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 78.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 30303 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1530 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 78.7798 - 4.7370 0.93 2668 137 0.1616 0.1930 REMARK 3 2 4.7370 - 3.7599 0.96 2616 160 0.1659 0.1896 REMARK 3 3 3.7599 - 3.2846 0.97 2633 120 0.2105 0.2474 REMARK 3 4 3.2846 - 2.9843 0.99 2663 143 0.2455 0.2756 REMARK 3 5 2.9843 - 2.7704 0.98 2639 143 0.2672 0.3115 REMARK 3 6 2.7704 - 2.6070 1.00 2648 167 0.2603 0.3040 REMARK 3 7 2.6070 - 2.4764 1.00 2684 118 0.2589 0.2930 REMARK 3 8 2.4764 - 2.3686 0.99 2624 131 0.2892 0.3145 REMARK 3 9 2.3686 - 2.2774 0.96 2596 135 0.3339 0.4129 REMARK 3 10 2.2774 - 2.1989 0.92 2399 138 0.4003 0.4449 REMARK 3 11 2.1989 - 2.1301 0.97 2603 138 0.3843 0.4214 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3694 REMARK 3 ANGLE : 1.228 5095 REMARK 3 CHIRALITY : 0.045 549 REMARK 3 PLANARITY : 0.005 545 REMARK 3 DIHEDRAL : 20.489 1466 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): 98.1074 122.9176 170.2856 REMARK 3 T TENSOR REMARK 3 T11: 0.3518 T22: 0.4092 REMARK 3 T33: 0.8024 T12: -0.0747 REMARK 3 T13: 0.0176 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 1.5163 L22: 2.7638 REMARK 3 L33: 6.2266 L12: -0.4142 REMARK 3 L13: 0.5789 L23: 0.3058 REMARK 3 S TENSOR REMARK 3 S11: 0.0290 S12: 0.0006 S13: 0.6961 REMARK 3 S21: -0.1311 S22: -0.0266 S23: 0.1236 REMARK 3 S31: -0.6314 S32: -0.2267 S33: 0.1189 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 100.5000 113.0446 162.3714 REMARK 3 T TENSOR REMARK 3 T11: 0.5962 T22: 0.4054 REMARK 3 T33: 0.5691 T12: -0.0454 REMARK 3 T13: 0.0250 T23: 0.1233 REMARK 3 L TENSOR REMARK 3 L11: 3.2192 L22: 5.0335 REMARK 3 L33: 2.5653 L12: -0.9650 REMARK 3 L13: -0.5055 L23: 5.4090 REMARK 3 S TENSOR REMARK 3 S11: -0.1109 S12: 0.2678 S13: 0.2561 REMARK 3 S21: -0.5660 S22: -0.2817 S23: 0.1354 REMARK 3 S31: -0.5772 S32: 0.1727 S33: 0.4590 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 220 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 111.7977 92.9795 159.4773 REMARK 3 T TENSOR REMARK 3 T11: 0.5278 T22: 0.5614 REMARK 3 T33: 0.7340 T12: 0.0841 REMARK 3 T13: 0.0957 T23: -0.0470 REMARK 3 L TENSOR REMARK 3 L11: 6.6119 L22: 8.5629 REMARK 3 L33: 4.6356 L12: -1.7415 REMARK 3 L13: -2.1824 L23: 0.1135 REMARK 3 S TENSOR REMARK 3 S11: -0.1080 S12: 0.1957 S13: -0.9251 REMARK 3 S21: -0.7051 S22: -0.0493 S23: -0.4599 REMARK 3 S31: 0.9545 S32: 0.5977 S33: -0.1338 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 110.2921 97.4793 146.7264 REMARK 3 T TENSOR REMARK 3 T11: 0.9636 T22: 0.9706 REMARK 3 T33: 0.7005 T12: 0.1222 REMARK 3 T13: 0.1591 T23: -0.0830 REMARK 3 L TENSOR REMARK 3 L11: 3.1378 L22: 7.6015 REMARK 3 L33: 6.9938 L12: 3.2523 REMARK 3 L13: -1.3110 L23: -1.2961 REMARK 3 S TENSOR REMARK 3 S11: -0.0380 S12: 1.4227 S13: -0.9696 REMARK 3 S21: -2.0615 S22: 0.1234 S23: -0.0439 REMARK 3 S31: 0.3091 S32: 0.5884 S33: -0.0074 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 259 THROUGH 348 ) REMARK 3 ORIGIN FOR THE GROUP (A): 104.9441 108.8533 163.1900 REMARK 3 T TENSOR REMARK 3 T11: 0.3639 T22: 0.4377 REMARK 3 T33: 0.4949 T12: 0.0143 REMARK 3 T13: 0.0251 T23: 0.0414 REMARK 3 L TENSOR REMARK 3 L11: 1.6419 L22: 3.9801 REMARK 3 L33: 3.0472 L12: 1.0627 REMARK 3 L13: -0.7847 L23: -1.7653 REMARK 3 S TENSOR REMARK 3 S11: 0.0238 S12: 0.2503 S13: 0.1527 REMARK 3 S21: -0.3671 S22: -0.1368 S23: -0.2717 REMARK 3 S31: -0.1378 S32: 0.3059 S33: 0.1126 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 349 THROUGH 376 ) REMARK 3 ORIGIN FOR THE GROUP (A): 110.0383 102.6869 166.4395 REMARK 3 T TENSOR REMARK 3 T11: 0.4188 T22: 0.4576 REMARK 3 T33: 0.6481 T12: 0.0078 REMARK 3 T13: 0.0260 T23: 0.1016 REMARK 3 L TENSOR REMARK 3 L11: 4.6314 L22: 3.8963 REMARK 3 L33: 6.0284 L12: 1.0756 REMARK 3 L13: -2.5189 L23: 0.0789 REMARK 3 S TENSOR REMARK 3 S11: -0.0210 S12: -0.3739 S13: -0.1012 REMARK 3 S21: -0.2994 S22: -0.1540 S23: -0.8850 REMARK 3 S31: 0.0238 S32: 1.0675 S33: 0.1517 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 377 THROUGH 505 ) REMARK 3 ORIGIN FOR THE GROUP (A): 107.8381 107.7573 185.9576 REMARK 3 T TENSOR REMARK 3 T11: 0.3811 T22: 0.5006 REMARK 3 T33: 0.5484 T12: -0.0606 REMARK 3 T13: -0.0316 T23: 0.0233 REMARK 3 L TENSOR REMARK 3 L11: 2.8958 L22: 3.5558 REMARK 3 L33: 2.5407 L12: 0.2341 REMARK 3 L13: 0.3322 L23: 1.6526 REMARK 3 S TENSOR REMARK 3 S11: 0.1026 S12: -0.4256 S13: 0.1580 REMARK 3 S21: 0.1081 S22: 0.1141 S23: -0.6278 REMARK 3 S31: -0.1004 S32: 0.5260 S33: -0.1919 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 83.9143 118.8157 168.8152 REMARK 3 T TENSOR REMARK 3 T11: 0.6779 T22: 0.6330 REMARK 3 T33: 0.7173 T12: 0.0747 REMARK 3 T13: 0.1859 T23: 0.0384 REMARK 3 L TENSOR REMARK 3 L11: 3.4491 L22: 7.2562 REMARK 3 L33: 5.2481 L12: 0.8084 REMARK 3 L13: 0.2278 L23: -1.9229 REMARK 3 S TENSOR REMARK 3 S11: 0.2827 S12: 0.8777 S13: 0.6149 REMARK 3 S21: -1.1222 S22: 0.1496 S23: -0.5216 REMARK 3 S31: -0.7314 S32: -0.1190 S33: -0.3446 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 4 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 82.2358 117.2926 170.3630 REMARK 3 T TENSOR REMARK 3 T11: 0.8880 T22: 0.9636 REMARK 3 T33: 0.7849 T12: -0.0321 REMARK 3 T13: -0.0350 T23: 0.0939 REMARK 3 L TENSOR REMARK 3 L11: 2.5865 L22: 5.2951 REMARK 3 L33: 2.2277 L12: 0.4901 REMARK 3 L13: -0.8466 L23: 4.4961 REMARK 3 S TENSOR REMARK 3 S11: 0.0231 S12: 0.1823 S13: 0.0571 REMARK 3 S21: -0.0975 S22: -0.1185 S23: 0.6239 REMARK 3 S31: 0.3064 S32: -2.1553 S33: -0.3932 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XZB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1300004414. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.008 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30303 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.130 REMARK 200 RESOLUTION RANGE LOW (A) : 78.726 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES, PH 6.3, 26% PEG400, 0.1 M REMARK 280 MAGNESIUM CHLORIDE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.75100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.42050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 65.10050 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.75100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.42050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.10050 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.75100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.42050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 65.10050 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.75100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 49.42050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.10050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 241 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 242 CG1 CG2 CD1 REMARK 470 ARG A 244 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG A 185 N SER A 187 2.10 REMARK 500 OP2 DT F 16 O HOH F 101 2.12 REMARK 500 O HOH A 727 O HOH A 742 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA F 14 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 185 -166.31 -44.67 REMARK 500 GLU A 186 -24.51 29.06 REMARK 500 SER A 207 -58.72 72.15 REMARK 500 ARG A 222 80.29 57.04 REMARK 500 TYR A 229 -126.73 49.68 REMARK 500 LYS A 240 -78.09 -73.38 REMARK 500 PRO A 243 32.33 -58.64 REMARK 500 ARG A 244 -124.48 52.77 REMARK 500 TRP A 331 -71.49 -120.28 REMARK 500 ASP A 354 -74.57 -53.00 REMARK 500 PHE A 504 2.02 -68.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 378 NE2 REMARK 620 2 CYS A 384 SG 117.2 REMARK 620 3 CYS A 385 SG 97.5 131.4 REMARK 620 4 CYS A 392 SG 98.1 99.6 108.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue A9Y A 602 DBREF 5XZB A 149 505 UNP Q8C6L5 CGAS_MOUSE 149 505 DBREF 5XZB E 1 15 PDB 5XZB 5XZB 1 15 DBREF 5XZB F 4 17 PDB 5XZB 5XZB 4 17 SEQRES 1 A 357 LYS LEU LYS LYS VAL LEU ASP LYS LEU ARG LEU LYS ARG SEQRES 2 A 357 LYS ASP ILE SER GLU ALA ALA GLU THR VAL ASN LYS VAL SEQRES 3 A 357 VAL GLU ARG LEU LEU ARG ARG MET GLN LYS ARG GLU SER SEQRES 4 A 357 GLU PHE LYS GLY VAL GLU GLN LEU ASN THR GLY SER TYR SEQRES 5 A 357 TYR GLU HIS VAL LYS ILE SER ALA PRO ASN GLU PHE ASP SEQRES 6 A 357 VAL MET PHE LYS LEU GLU VAL PRO ARG ILE GLU LEU GLN SEQRES 7 A 357 GLU TYR TYR GLU THR GLY ALA PHE TYR LEU VAL LYS PHE SEQRES 8 A 357 LYS ARG ILE PRO ARG GLY ASN PRO LEU SER HIS PHE LEU SEQRES 9 A 357 GLU GLY GLU VAL LEU SER ALA THR LYS MET LEU SER LYS SEQRES 10 A 357 PHE ARG LYS ILE ILE LYS GLU GLU VAL LYS GLU ILE LYS SEQRES 11 A 357 ASP ILE ASP VAL SER VAL GLU LYS GLU LYS PRO GLY SER SEQRES 12 A 357 PRO ALA VAL THR LEU LEU ILE ARG ASN PRO GLU GLU ILE SEQRES 13 A 357 SER VAL ASP ILE ILE LEU ALA LEU GLU SER LYS GLY SER SEQRES 14 A 357 TRP PRO ILE SER THR LYS GLU GLY LEU PRO ILE GLN GLY SEQRES 15 A 357 TRP LEU GLY THR LYS VAL ARG THR ASN LEU ARG ARG GLU SEQRES 16 A 357 PRO PHE TYR LEU VAL PRO LYS ASN ALA LYS ASP GLY ASN SEQRES 17 A 357 SER PHE GLN GLY GLU THR TRP ARG LEU SER PHE SER HIS SEQRES 18 A 357 THR GLU LYS TYR ILE LEU ASN ASN HIS GLY ILE GLU LYS SEQRES 19 A 357 THR CYS CYS GLU SER SER GLY ALA LYS CYS CYS ARG LYS SEQRES 20 A 357 GLU CYS LEU LYS LEU MET LYS TYR LEU LEU GLU GLN LEU SEQRES 21 A 357 LYS LYS GLU PHE GLN GLU LEU ASP ALA PHE CYS SER TYR SEQRES 22 A 357 HIS VAL LYS THR ALA ILE PHE HIS MET TRP THR GLN ASP SEQRES 23 A 357 PRO GLN ASP SER GLN TRP ASP PRO ARG ASN LEU SER SER SEQRES 24 A 357 CYS PHE ASP LYS LEU LEU ALA PHE PHE LEU GLU CYS LEU SEQRES 25 A 357 ARG THR GLU LYS LEU ASP HIS TYR PHE ILE PRO LYS PHE SEQRES 26 A 357 ASN LEU PHE SER GLN GLU LEU ILE ASP ARG LYS SER LYS SEQRES 27 A 357 GLU PHE LEU SER LYS LYS ILE GLU TYR GLU ARG ASN ASN SEQRES 28 A 357 GLY PHE PRO ILE PHE ASP SEQRES 1 E 15 DA DA DA DT DT DG DC DC DG DA DA DG DA SEQRES 2 E 15 DC DG SEQRES 1 F 14 DC DG DT DC DT DT DC DG DG DC DA DA DT SEQRES 2 F 14 DT HET ZN A 601 1 HET A9Y A 602 26 HETNAM ZN ZINC ION HETNAM A9Y (3R)-3-[1-(1H-BENZIMIDAZOL-2-YL)-5-HYDROXY-3-METHYL-1H- HETNAM 2 A9Y PYRAZOL-4-YL]-2-BENZOFURAN-1(3H)-ONE FORMUL 4 ZN ZN 2+ FORMUL 5 A9Y C19 H14 N4 O3 FORMUL 6 HOH *66(H2 O) HELIX 1 AA1 LYS A 149 ARG A 158 1 10 HELIX 2 AA2 LYS A 160 LYS A 184 1 25 HELIX 3 AA3 LEU A 248 HIS A 250 5 3 HELIX 4 AA4 SER A 258 LYS A 275 1 18 HELIX 5 AA5 PRO A 319 LYS A 323 5 5 HELIX 6 AA6 GLY A 333 ARG A 341 1 9 HELIX 7 AA7 PHE A 367 ASN A 377 1 11 HELIX 8 AA8 CYS A 393 PHE A 412 1 20 HELIX 9 AA9 GLN A 413 ASP A 416 5 4 HELIX 10 AB1 CYS A 419 ASP A 434 1 16 HELIX 11 AB2 GLN A 436 ARG A 443 5 8 HELIX 12 AB3 ASN A 444 THR A 462 1 19 HELIX 13 AB4 ASP A 482 ASN A 498 1 17 HELIX 14 AB5 PHE A 501 ASP A 505 5 5 SHEET 1 AA1 7 GLU A 193 THR A 197 0 SHEET 2 AA1 7 GLU A 211 GLU A 219 -1 O MET A 215 N LEU A 195 SHEET 3 AA1 7 GLU A 303 SER A 314 1 O ALA A 311 N LEU A 218 SHEET 4 AA1 7 PHE A 345 VAL A 348 -1 O LEU A 347 N LEU A 312 SHEET 5 AA1 7 TRP A 363 SER A 366 -1 O ARG A 364 N VAL A 348 SHEET 6 AA1 7 PHE A 234 PHE A 239 -1 N TYR A 235 O TRP A 363 SHEET 7 AA1 7 ILE A 223 GLU A 227 -1 N GLN A 226 O LEU A 236 SHEET 1 AA2 5 GLU A 193 THR A 197 0 SHEET 2 AA2 5 GLU A 211 GLU A 219 -1 O MET A 215 N LEU A 195 SHEET 3 AA2 5 GLU A 303 SER A 314 1 O ALA A 311 N LEU A 218 SHEET 4 AA2 5 ALA A 293 ARG A 299 -1 N ILE A 298 O ILE A 304 SHEET 5 AA2 5 ASP A 281 VAL A 284 -1 N SER A 283 O LEU A 297 SHEET 1 AA3 2 LEU A 252 GLU A 253 0 SHEET 2 AA3 2 VAL A 256 LEU A 257 -1 O VAL A 256 N GLU A 253 LINK NE2 HIS A 378 ZN ZN A 601 1555 1555 2.28 LINK SG CYS A 384 ZN ZN A 601 1555 1555 2.27 LINK SG CYS A 385 ZN ZN A 601 1555 1555 2.35 LINK SG CYS A 392 ZN ZN A 601 1555 1555 2.49 CISPEP 1 ASN A 300 PRO A 301 0 3.08 SITE 1 AC1 4 HIS A 378 CYS A 384 CYS A 385 CYS A 392 SITE 1 AC2 6 ARG A 364 LEU A 365 CYS A 419 TYR A 421 SITE 2 AC2 6 HIS A 467 HOH A 738 CRYST1 85.502 98.841 130.201 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011696 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010117 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007680 0.00000