HEADER IMMUNE SYSTEM/INHIBITOR 12-JUL-17 5XZE TITLE MOUSE CGAS BOUND TO THE INHIBITOR RU332 CAVEAT 5XZE LIGAND A ZN 601 IS MODELED WITH ZERO OCCUPANCY. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC GMP-AMP SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 147-505; COMPND 5 SYNONYM: M-CGAS, 2'3'-CGAMP SYNTHASE, MAB-21 DOMAIN-CONTAINING COMPND 6 PROTEIN 1; COMPND 7 EC: 2.7.7.86; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: DNA (5'-D(*AP*AP*AP*TP*TP*GP*CP*CP*GP*AP*AP*GP*AP*CP*G)- COMPND 11 3'); COMPND 12 CHAIN: E; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: DNA (5'-D(P*CP*GP*TP*CP*TP*TP*CP*GP*GP*CP*AP*AP*TP*T)-3'); COMPND 16 CHAIN: F; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MB21D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 16 ORGANISM_COMMON: MOUSE; SOURCE 17 ORGANISM_TAXID: 10090 KEYWDS INHIBITOR, CGAS, STING, IMMUNE SYSTEM-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.VINCENT,C.ADURA,P.GAO,A.LUZ,L.LAMA,Y.ASANO,R.OKAMOTO,T.IMAEDA, AUTHOR 2 J.AIDA,K.ROTHAMEL,T.GOGAKOS,J.STEINBERG,S.REASONER,K.ASO,T.TUSCHL, AUTHOR 3 D.J.PATEL,J.F.GLICKMAN,M.ASCANO REVDAT 2 13-MAR-24 5XZE 1 REMARK REVDAT 1 11-OCT-17 5XZE 0 JRNL AUTH J.VINCENT,C.ADURA,P.GAO,A.LUZ,L.LAMA,Y.ASANO,R.OKAMOTO, JRNL AUTH 2 T.IMAEDA,J.AIDA,K.ROTHAMEL,T.GOGAKOS,J.STEINBERG,S.REASONER, JRNL AUTH 3 K.ASO,T.TUSCHL,D.J.PATEL,J.F.GLICKMAN,M.ASCANO JRNL TITL SMALL MOLECULE INHIBITION OF CGAS REDUCES INTERFERON JRNL TITL 2 EXPRESSION IN PRIMARY MACROPHAGES FROM AUTOIMMUNE MICE. JRNL REF NAT COMMUN V. 8 750 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28963528 JRNL DOI 10.1038/S41467-017-00833-9 REMARK 2 REMARK 2 RESOLUTION. 2.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 28373 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.244 REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1428 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.2029 - 4.6871 0.94 2730 144 0.1909 0.2447 REMARK 3 2 4.6871 - 3.7212 0.98 2716 158 0.1963 0.2236 REMARK 3 3 3.7212 - 3.2511 0.99 2743 140 0.2360 0.2749 REMARK 3 4 3.2511 - 2.9539 0.99 2718 144 0.2758 0.3097 REMARK 3 5 2.9539 - 2.7423 1.00 2740 128 0.2981 0.3435 REMARK 3 6 2.7423 - 2.5806 1.00 2709 150 0.3015 0.3295 REMARK 3 7 2.5806 - 2.4514 1.00 2709 143 0.3097 0.3456 REMARK 3 8 2.4514 - 2.3447 0.99 2692 148 0.3338 0.3863 REMARK 3 9 2.3447 - 2.2544 0.99 2692 133 0.3510 0.3987 REMARK 3 10 2.2544 - 2.1767 0.93 2496 140 0.3899 0.4087 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3694 REMARK 3 ANGLE : 1.253 5095 REMARK 3 CHIRALITY : 0.048 549 REMARK 3 PLANARITY : 0.005 545 REMARK 3 DIHEDRAL : 20.460 1466 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): 101.3108 211.8781 293.1301 REMARK 3 T TENSOR REMARK 3 T11: 0.3921 T22: 0.4000 REMARK 3 T33: 0.5271 T12: -0.0796 REMARK 3 T13: 0.0407 T23: 0.1070 REMARK 3 L TENSOR REMARK 3 L11: 3.2589 L22: 3.0136 REMARK 3 L33: 2.4325 L12: -0.1160 REMARK 3 L13: 0.4710 L23: -0.2434 REMARK 3 S TENSOR REMARK 3 S11: 0.0529 S12: 0.4685 S13: 0.4596 REMARK 3 S21: -0.4954 S22: -0.0144 S23: -0.0547 REMARK 3 S31: -0.2143 S32: 0.0962 S33: -0.0156 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 235 THROUGH 376 ) REMARK 3 ORIGIN FOR THE GROUP (A): 106.7151 204.0520 289.2943 REMARK 3 T TENSOR REMARK 3 T11: 0.4274 T22: 0.4463 REMARK 3 T33: 0.5192 T12: -0.0065 REMARK 3 T13: 0.0719 T23: 0.0162 REMARK 3 L TENSOR REMARK 3 L11: 1.6138 L22: 3.3866 REMARK 3 L33: 2.0160 L12: 0.5403 REMARK 3 L13: -0.2235 L23: -1.0907 REMARK 3 S TENSOR REMARK 3 S11: 0.0423 S12: 0.3489 S13: -0.0231 REMARK 3 S21: -0.5182 S22: -0.1668 S23: -0.4167 REMARK 3 S31: -0.0984 S32: 0.3948 S33: 0.0981 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 377 THROUGH 505 ) REMARK 3 ORIGIN FOR THE GROUP (A): 107.6158 206.1474 313.6681 REMARK 3 T TENSOR REMARK 3 T11: 0.3024 T22: 0.4282 REMARK 3 T33: 0.5869 T12: -0.0600 REMARK 3 T13: -0.0165 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 2.5287 L22: 2.3787 REMARK 3 L33: 2.1369 L12: -0.1106 REMARK 3 L13: 0.1954 L23: 1.3463 REMARK 3 S TENSOR REMARK 3 S11: 0.1066 S12: -0.3702 S13: 0.2270 REMARK 3 S21: 0.1024 S22: 0.1154 S23: -0.6987 REMARK 3 S31: -0.0851 S32: 0.5166 S33: -0.1848 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 1 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): 83.8626 213.9607 279.4493 REMARK 3 T TENSOR REMARK 3 T11: 1.4161 T22: 1.7596 REMARK 3 T33: 0.9654 T12: -0.1402 REMARK 3 T13: 0.1774 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 7.5509 L22: 6.7807 REMARK 3 L33: 8.9458 L12: 3.8142 REMARK 3 L13: 0.3529 L23: -2.7699 REMARK 3 S TENSOR REMARK 3 S11: 0.1665 S12: 1.4387 S13: -0.2928 REMARK 3 S21: -0.6728 S22: 0.2540 S23: -0.7273 REMARK 3 S31: -0.1667 S32: -0.3189 S33: -0.4150 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 6 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 83.6077 218.8008 304.6611 REMARK 3 T TENSOR REMARK 3 T11: 0.5367 T22: 0.3072 REMARK 3 T33: 0.6194 T12: 0.0211 REMARK 3 T13: 0.1063 T23: 0.0235 REMARK 3 L TENSOR REMARK 3 L11: 6.9308 L22: 7.9368 REMARK 3 L33: 3.7519 L12: 1.1259 REMARK 3 L13: -0.8412 L23: 1.3244 REMARK 3 S TENSOR REMARK 3 S11: 0.2030 S12: -0.1654 S13: 1.1656 REMARK 3 S21: 0.4543 S22: 0.0999 S23: 0.4520 REMARK 3 S31: -0.8536 S32: -0.2994 S33: -0.1966 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 4 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 82.1032 215.6923 298.0468 REMARK 3 T TENSOR REMARK 3 T11: 0.5618 T22: 0.7024 REMARK 3 T33: 0.6478 T12: 0.0119 REMARK 3 T13: -0.0411 T23: 0.1051 REMARK 3 L TENSOR REMARK 3 L11: 5.1166 L22: 5.5293 REMARK 3 L33: 5.9111 L12: 0.4039 REMARK 3 L13: 0.3069 L23: 0.9885 REMARK 3 S TENSOR REMARK 3 S11: 0.1525 S12: -0.1237 S13: 0.2043 REMARK 3 S21: -0.0670 S22: 0.1648 S23: 0.3318 REMARK 3 S31: 0.0864 S32: -1.5974 S33: -0.3212 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XZE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1300004421. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SINGLE REMARK 200 CRYSTAL SI(220) SIDE BOUNCE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28373 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.177 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES, PH 6.3, 25% PEG400, 0.1 M REMARK 280 MAGNESIUM CHLORIDE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.64250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.31650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 64.58750 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.64250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.31650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.58750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.64250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.31650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 64.58750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.64250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 49.31650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 64.58750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 728 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 751 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 146 REMARK 465 PRO A 147 REMARK 465 ASP A 148 REMARK 465 LYS A 506 REMARK 465 LEU A 507 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 241 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 242 CG1 CG2 CD1 REMARK 470 ARG A 244 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 315 O HOH A 701 1.90 REMARK 500 OH TYR A 403 O HOH A 702 1.99 REMARK 500 OE2 GLU A 381 O HOH A 703 2.11 REMARK 500 OP1 DG E 12 O HOH E 101 2.16 REMARK 500 OG1 THR A 260 O GLY A 360 2.17 REMARK 500 OP2 DG F 12 O HOH F 101 2.17 REMARK 500 NZ LYS A 173 OD2 ASP A 279 2.17 REMARK 500 NZ LYS A 315 O HOH A 704 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP A 354 OD1 ASP A 354 2895 1.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC E 8 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DA E 11 C3' - C2' - C1' ANGL. DEV. = -4.9 DEGREES REMARK 500 DA E 11 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 183 -140.95 -79.27 REMARK 500 LYS A 184 81.25 64.92 REMARK 500 ARG A 185 -154.45 42.29 REMARK 500 GLU A 186 -84.93 40.98 REMARK 500 PHE A 189 35.69 -89.28 REMARK 500 LYS A 190 -90.69 -50.94 REMARK 500 SER A 207 -63.89 66.86 REMARK 500 TYR A 229 -123.64 55.51 REMARK 500 ARG A 244 -88.83 56.50 REMARK 500 GLU A 287 151.47 -40.45 REMARK 500 TRP A 331 -70.36 -124.00 REMARK 500 PRO A 349 49.18 -74.73 REMARK 500 PHE A 501 71.30 46.22 REMARK 500 PHE A 504 9.29 -64.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 243 ARG A 244 -148.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 ZN A 601 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 378 NE2 REMARK 620 2 CYS A 384 SG 120.4 REMARK 620 3 CYS A 385 SG 95.4 128.0 REMARK 620 4 CYS A 392 SG 100.5 96.1 114.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AE7 A 602 DBREF 5XZE A 147 507 UNP Q8C6L5 CGAS_MOUSE 147 507 DBREF 5XZE E 1 15 PDB 5XZE 5XZE 1 15 DBREF 5XZE F 4 17 PDB 5XZE 5XZE 4 17 SEQADV 5XZE SER A 146 UNP Q8C6L5 EXPRESSION TAG SEQRES 1 A 362 SER PRO ASP LYS LEU LYS LYS VAL LEU ASP LYS LEU ARG SEQRES 2 A 362 LEU LYS ARG LYS ASP ILE SER GLU ALA ALA GLU THR VAL SEQRES 3 A 362 ASN LYS VAL VAL GLU ARG LEU LEU ARG ARG MET GLN LYS SEQRES 4 A 362 ARG GLU SER GLU PHE LYS GLY VAL GLU GLN LEU ASN THR SEQRES 5 A 362 GLY SER TYR TYR GLU HIS VAL LYS ILE SER ALA PRO ASN SEQRES 6 A 362 GLU PHE ASP VAL MET PHE LYS LEU GLU VAL PRO ARG ILE SEQRES 7 A 362 GLU LEU GLN GLU TYR TYR GLU THR GLY ALA PHE TYR LEU SEQRES 8 A 362 VAL LYS PHE LYS ARG ILE PRO ARG GLY ASN PRO LEU SER SEQRES 9 A 362 HIS PHE LEU GLU GLY GLU VAL LEU SER ALA THR LYS MET SEQRES 10 A 362 LEU SER LYS PHE ARG LYS ILE ILE LYS GLU GLU VAL LYS SEQRES 11 A 362 GLU ILE LYS ASP ILE ASP VAL SER VAL GLU LYS GLU LYS SEQRES 12 A 362 PRO GLY SER PRO ALA VAL THR LEU LEU ILE ARG ASN PRO SEQRES 13 A 362 GLU GLU ILE SER VAL ASP ILE ILE LEU ALA LEU GLU SER SEQRES 14 A 362 LYS GLY SER TRP PRO ILE SER THR LYS GLU GLY LEU PRO SEQRES 15 A 362 ILE GLN GLY TRP LEU GLY THR LYS VAL ARG THR ASN LEU SEQRES 16 A 362 ARG ARG GLU PRO PHE TYR LEU VAL PRO LYS ASN ALA LYS SEQRES 17 A 362 ASP GLY ASN SER PHE GLN GLY GLU THR TRP ARG LEU SER SEQRES 18 A 362 PHE SER HIS THR GLU LYS TYR ILE LEU ASN ASN HIS GLY SEQRES 19 A 362 ILE GLU LYS THR CYS CYS GLU SER SER GLY ALA LYS CYS SEQRES 20 A 362 CYS ARG LYS GLU CYS LEU LYS LEU MET LYS TYR LEU LEU SEQRES 21 A 362 GLU GLN LEU LYS LYS GLU PHE GLN GLU LEU ASP ALA PHE SEQRES 22 A 362 CYS SER TYR HIS VAL LYS THR ALA ILE PHE HIS MET TRP SEQRES 23 A 362 THR GLN ASP PRO GLN ASP SER GLN TRP ASP PRO ARG ASN SEQRES 24 A 362 LEU SER SER CYS PHE ASP LYS LEU LEU ALA PHE PHE LEU SEQRES 25 A 362 GLU CYS LEU ARG THR GLU LYS LEU ASP HIS TYR PHE ILE SEQRES 26 A 362 PRO LYS PHE ASN LEU PHE SER GLN GLU LEU ILE ASP ARG SEQRES 27 A 362 LYS SER LYS GLU PHE LEU SER LYS LYS ILE GLU TYR GLU SEQRES 28 A 362 ARG ASN ASN GLY PHE PRO ILE PHE ASP LYS LEU SEQRES 1 E 15 DA DA DA DT DT DG DC DC DG DA DA DG DA SEQRES 2 E 15 DC DG SEQRES 1 F 14 DC DG DT DC DT DT DC DG DG DC DA DA DT SEQRES 2 F 14 DT HET ZN A 601 1 HET AE7 A 602 26 HETNAM ZN ZINC ION HETNAM AE7 (3R)-3-[1-(3H-1LAMBDA~4~,3-BENZOTHIAZOL-2-YL)-5- HETNAM 2 AE7 HYDROXY-3-METHYL-1H-PYRAZOL-4-YL]-2-BENZOFURAN-1(3H)- HETNAM 3 AE7 ONE FORMUL 4 ZN ZN 2+ FORMUL 5 AE7 C19 H15 N3 O3 S FORMUL 6 HOH *82(H2 O) HELIX 1 AA1 LYS A 149 ARG A 158 1 10 HELIX 2 AA2 LYS A 160 GLN A 183 1 24 HELIX 3 AA3 ASN A 246 HIS A 250 5 5 HELIX 4 AA4 SER A 258 LYS A 275 1 18 HELIX 5 AA5 PRO A 319 LYS A 323 5 5 HELIX 6 AA6 GLY A 333 GLU A 343 1 11 HELIX 7 AA7 PHE A 367 ASN A 377 1 11 HELIX 8 AA8 CYS A 393 PHE A 412 1 20 HELIX 9 AA9 GLN A 413 ASP A 416 5 4 HELIX 10 AB1 CYS A 419 ASP A 434 1 16 HELIX 11 AB2 GLN A 436 ARG A 443 5 8 HELIX 12 AB3 ASN A 444 THR A 462 1 19 HELIX 13 AB4 ASP A 482 ASN A 499 1 18 HELIX 14 AB5 GLY A 500 ASP A 505 5 6 SHEET 1 AA1 7 GLU A 193 THR A 197 0 SHEET 2 AA1 7 GLU A 211 GLU A 219 -1 O MET A 215 N LEU A 195 SHEET 3 AA1 7 GLU A 303 SER A 314 1 O ALA A 311 N LEU A 218 SHEET 4 AA1 7 PHE A 345 VAL A 348 -1 O LEU A 347 N LEU A 312 SHEET 5 AA1 7 TRP A 363 SER A 366 -1 O ARG A 364 N VAL A 348 SHEET 6 AA1 7 PHE A 234 PHE A 239 -1 N TYR A 235 O TRP A 363 SHEET 7 AA1 7 ILE A 223 GLU A 227 -1 N GLU A 224 O LYS A 238 SHEET 1 AA2 5 GLU A 193 THR A 197 0 SHEET 2 AA2 5 GLU A 211 GLU A 219 -1 O MET A 215 N LEU A 195 SHEET 3 AA2 5 GLU A 303 SER A 314 1 O ALA A 311 N LEU A 218 SHEET 4 AA2 5 ALA A 293 ARG A 299 -1 N ILE A 298 O ILE A 304 SHEET 5 AA2 5 ASP A 281 VAL A 284 -1 N SER A 283 O LEU A 297 SHEET 1 AA3 2 LEU A 252 GLU A 253 0 SHEET 2 AA3 2 VAL A 256 LEU A 257 -1 O VAL A 256 N GLU A 253 LINK NE2 HIS A 378 ZN ZN A 601 1555 1555 2.24 LINK SG CYS A 384 ZN ZN A 601 1555 1555 2.53 LINK SG CYS A 385 ZN ZN A 601 1555 1555 2.54 LINK SG CYS A 392 ZN ZN A 601 1555 1555 2.24 CISPEP 1 ASN A 300 PRO A 301 0 4.30 SITE 1 AC1 6 ARG A 364 LEU A 365 CYS A 419 HIS A 422 SITE 2 AC1 6 HIS A 467 LEU A 475 CRYST1 85.285 98.633 129.175 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011725 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010139 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007741 0.00000