HEADER VIRUS/IMMUNE SYSTEM 15-JUL-17 5Y0A TITLE CRYO-EM STRUCTURE OF ZIKA VIRUS COMPLEXED WITH FAB OF ZKA190 AT PH 8.0 TITLE 2 AND 37 CELSIUS DEGREE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN E; COMPND 3 CHAIN: A, C, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: VARIABLE REGION OF FAB ZKA190 HEAVY CHAIN; COMPND 7 CHAIN: H, F, D; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: VARIABLE REGION OF FAB ZKA190 LIGHT CHAIN; COMPND 11 CHAIN: L, G, E; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZIKA VIRUS (STRAIN MR 766); SOURCE 3 ORGANISM_COMMON: ZIKV; SOURCE 4 ORGANISM_TAXID: 64320; SOURCE 5 STRAIN: MR 766; SOURCE 6 EXPRESSION_SYSTEM: AEDES ALBOPICTUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7160; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: C6/36; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM_CELL_LINE: EXPI293; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 21 EXPRESSION_SYSTEM_CELL_LINE: EXPI293 KEYWDS VIRUS, ANTIBODY, COMPLEX, VIRUS-IMMUNE SYSTEM COMPLEX, ICOSAHEDRAL KEYWDS 2 VIRUS EXPDTA ELECTRON MICROSCOPY MDLTYP CA ATOMS ONLY, CHAIN A, C, B, H, L, F, G, D, E AUTHOR J.Q.WANG,S.M.LOK REVDAT 2 27-MAR-24 5Y0A 1 REMARK REVDAT 1 04-OCT-17 5Y0A 0 JRNL AUTH J.WANG,M.BARDELLI,D.A.ESPINOSA,M.PEDOTTI,T.S.NG,S.BIANCHI, JRNL AUTH 2 L.SIMONELLI,E.X.Y.LIM,M.FOGLIERINI,F.ZATTA,S.JACONI, JRNL AUTH 3 M.BELTRAMELLO,E.CAMERONI,G.FIBRIANSAH,J.SHI,T.BARCA, JRNL AUTH 4 I.PAGANI,A.RUBIO,V.BROCCOLI,E.VICENZI,V.GRAHAM,S.PULLAN, JRNL AUTH 5 S.DOWALL,R.HEWSON,S.JURT,O.ZERBE,K.STETTLER,A.LANZAVECCHIA, JRNL AUTH 6 F.SALLUSTO,A.CAVALLI,E.HARRIS,S.M.LOK,L.VARANI,D.CORTI JRNL TITL A HUMAN BI-SPECIFIC ANTIBODY AGAINST ZIKA VIRUS WITH HIGH JRNL TITL 2 THERAPEUTIC POTENTIAL. JRNL REF CELL V. 171 229 2017 JRNL REFN ISSN 1097-4172 JRNL PMID 28938115 JRNL DOI 10.1016/J.CELL.2017.09.002 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.Q.WANG,S.M.LOK REMARK 1 TITL CRYO-EM STRUCTURE OF ZIKA VIRUS COMPLEXED WITH A HUMAN REMARK 1 TITL 2 MONOCLONAL ANTIBODY REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 22.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, LEGINON, CTFFIND3, RELION, REMARK 3 RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : BACK PROJECTION REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 22.00 REMARK 3 NUMBER OF PARTICLES : 6728 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 5Y0A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1300004443. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ZIKA VIRUS COMPLEXED WITH FAB REMARK 245 OF A HUMAN MONOCLONAL ANTIBODY REMARK 245 NAMED ZKA190; ZIKA VIRUS; FAB REMARK 245 ZKA190 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON II (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 2000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, H, L, F, G, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.361803 0.587785 -0.723607 0.00000 REMARK 350 BIOMT2 2 -0.262866 0.809017 0.525731 0.00000 REMARK 350 BIOMT3 2 0.894427 0.000000 0.447214 0.00000 REMARK 350 BIOMT1 3 -0.670820 0.688191 -0.276393 0.00000 REMARK 350 BIOMT2 3 0.162460 0.500000 0.850651 0.00000 REMARK 350 BIOMT3 3 0.723607 0.525731 -0.447214 0.00000 REMARK 350 BIOMT1 4 -0.670820 0.162460 0.723607 0.00000 REMARK 350 BIOMT2 4 0.688191 0.500000 0.525731 0.00000 REMARK 350 BIOMT3 4 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 5 0.361803 -0.262866 0.894427 0.00000 REMARK 350 BIOMT2 5 0.587785 0.809017 0.000000 0.00000 REMARK 350 BIOMT3 5 -0.723607 0.525731 0.447214 0.00000 REMARK 350 BIOMT1 6 -0.052787 0.688191 0.723607 0.00000 REMARK 350 BIOMT2 6 0.688191 -0.500000 0.525731 0.00000 REMARK 350 BIOMT3 6 0.723607 0.525731 -0.447213 0.00000 REMARK 350 BIOMT1 7 0.447214 0.525731 0.723607 0.00000 REMARK 350 BIOMT2 7 0.850651 0.000000 -0.525731 0.00000 REMARK 350 BIOMT3 7 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 8 0.670820 0.688191 0.276393 0.00000 REMARK 350 BIOMT2 8 -0.162460 0.500000 -0.850651 0.00000 REMARK 350 BIOMT3 8 -0.723607 0.525731 0.447214 0.00000 REMARK 350 BIOMT1 9 0.309017 0.951057 0.000000 0.00000 REMARK 350 BIOMT2 9 -0.951057 0.309017 0.000000 0.00000 REMARK 350 BIOMT3 9 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 10 -0.138197 0.951057 0.276393 0.00000 REMARK 350 BIOMT2 10 -0.425326 -0.309017 0.850651 0.00000 REMARK 350 BIOMT3 10 0.894427 0.000000 0.447214 0.00000 REMARK 350 BIOMT1 11 -0.309017 -0.951057 0.000000 0.00000 REMARK 350 BIOMT2 11 -0.951057 0.309017 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 12 0.138197 -0.951057 -0.276393 0.00000 REMARK 350 BIOMT2 12 -0.425326 -0.309017 0.850651 0.00000 REMARK 350 BIOMT3 12 -0.894427 0.000000 -0.447214 0.00000 REMARK 350 BIOMT1 13 0.052787 -0.688191 -0.723607 0.00000 REMARK 350 BIOMT2 13 0.688191 -0.500000 0.525731 0.00000 REMARK 350 BIOMT3 13 -0.723607 -0.525731 0.447213 0.00000 REMARK 350 BIOMT1 14 -0.447214 -0.525731 -0.723607 0.00000 REMARK 350 BIOMT2 14 0.850651 0.000000 -0.525731 0.00000 REMARK 350 BIOMT3 14 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 15 -0.670820 -0.688191 -0.276393 0.00000 REMARK 350 BIOMT2 15 -0.162460 0.500000 -0.850651 0.00000 REMARK 350 BIOMT3 15 0.723607 -0.525731 -0.447214 0.00000 REMARK 350 BIOMT1 16 -0.638196 0.262866 -0.723607 0.00000 REMARK 350 BIOMT2 16 0.262866 -0.809017 -0.525731 0.00000 REMARK 350 BIOMT3 16 -0.723607 -0.525731 0.447213 0.00000 REMARK 350 BIOMT1 17 -0.947214 -0.162460 0.276393 0.00000 REMARK 350 BIOMT2 17 -0.162460 -0.500000 -0.850651 0.00000 REMARK 350 BIOMT3 17 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 18 -0.052787 -0.688191 0.723607 0.00000 REMARK 350 BIOMT2 18 -0.688191 -0.500000 -0.525731 0.00000 REMARK 350 BIOMT3 18 0.723607 -0.525731 -0.447213 0.00000 REMARK 350 BIOMT1 19 0.809017 -0.587785 0.000000 0.00000 REMARK 350 BIOMT2 19 -0.587785 -0.809017 0.000000 0.00000 REMARK 350 BIOMT3 19 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 20 0.447214 0.000000 -0.894427 0.00000 REMARK 350 BIOMT2 20 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 20 -0.894427 0.000000 -0.447214 0.00000 REMARK 350 BIOMT1 21 -0.447214 0.525731 -0.723607 0.00000 REMARK 350 BIOMT2 21 -0.850651 0.000000 0.525731 0.00000 REMARK 350 BIOMT3 21 0.276393 0.850651 0.447214 0.00000 REMARK 350 BIOMT1 22 -0.947214 0.162460 0.276393 0.00000 REMARK 350 BIOMT2 22 0.162460 -0.500000 0.850651 0.00000 REMARK 350 BIOMT3 22 0.276393 0.850651 0.447214 0.00000 REMARK 350 BIOMT1 23 -0.138197 -0.425326 0.894427 0.00000 REMARK 350 BIOMT2 23 0.951057 -0.309017 0.000000 0.00000 REMARK 350 BIOMT3 23 0.276393 0.850651 0.447214 0.00000 REMARK 350 BIOMT1 24 0.861803 -0.425326 0.276393 0.00000 REMARK 350 BIOMT2 24 0.425326 0.309017 -0.850651 0.00000 REMARK 350 BIOMT3 24 0.276393 0.850651 0.447214 0.00000 REMARK 350 BIOMT1 25 0.670820 0.162460 -0.723607 0.00000 REMARK 350 BIOMT2 25 -0.688191 0.500000 -0.525731 0.00000 REMARK 350 BIOMT3 25 0.276393 0.850651 0.447214 0.00000 REMARK 350 BIOMT1 26 -0.138197 -0.951057 0.276393 0.00000 REMARK 350 BIOMT2 26 0.425326 -0.309017 -0.850651 0.00000 REMARK 350 BIOMT3 26 0.894427 0.000000 0.447214 0.00000 REMARK 350 BIOMT1 27 0.447214 -0.850651 -0.276393 0.00000 REMARK 350 BIOMT2 27 -0.525731 0.000000 -0.850651 0.00000 REMARK 350 BIOMT3 27 0.723607 0.525731 -0.447214 0.00000 REMARK 350 BIOMT1 28 0.138197 -0.425326 -0.894427 0.00000 REMARK 350 BIOMT2 28 -0.951057 -0.309017 0.000000 0.00000 REMARK 350 BIOMT3 28 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 29 -0.638196 -0.262866 -0.723607 0.00000 REMARK 350 BIOMT2 29 -0.262866 -0.809017 0.525731 0.00000 REMARK 350 BIOMT3 29 -0.723607 0.525731 0.447213 0.00000 REMARK 350 BIOMT1 30 -0.809017 -0.587785 0.000000 0.00000 REMARK 350 BIOMT2 30 0.587785 -0.809017 0.000000 0.00000 REMARK 350 BIOMT3 30 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 31 -0.361803 0.587785 0.723607 0.00000 REMARK 350 BIOMT2 31 0.262866 0.809017 -0.525731 0.00000 REMARK 350 BIOMT3 31 -0.894427 0.000000 -0.447214 0.00000 REMARK 350 BIOMT1 32 0.361803 0.262866 0.894427 0.00000 REMARK 350 BIOMT2 32 -0.587785 0.809017 0.000000 0.00000 REMARK 350 BIOMT3 32 -0.723607 -0.525731 0.447214 0.00000 REMARK 350 BIOMT1 33 0.861803 0.425326 0.276393 0.00000 REMARK 350 BIOMT2 33 -0.425326 0.309017 0.850651 0.00000 REMARK 350 BIOMT3 33 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 34 0.447214 0.850651 -0.276393 0.00000 REMARK 350 BIOMT2 34 0.525731 0.000000 0.850651 0.00000 REMARK 350 BIOMT3 34 0.723607 -0.525731 -0.447214 0.00000 REMARK 350 BIOMT1 35 -0.309017 0.951057 0.000000 0.00000 REMARK 350 BIOMT2 35 0.951057 0.309017 0.000000 0.00000 REMARK 350 BIOMT3 35 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 36 0.947214 -0.162460 -0.276393 0.00000 REMARK 350 BIOMT2 36 0.162460 -0.500000 0.850651 0.00000 REMARK 350 BIOMT3 36 -0.276393 -0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 37 0.138197 0.425326 -0.894427 0.00000 REMARK 350 BIOMT2 37 0.951057 -0.309017 0.000000 0.00000 REMARK 350 BIOMT3 37 -0.276393 -0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 38 -0.861803 0.425326 -0.276393 0.00000 REMARK 350 BIOMT2 38 0.425326 0.309017 -0.850651 0.00000 REMARK 350 BIOMT3 38 -0.276393 -0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 39 -0.670820 -0.162460 0.723607 0.00000 REMARK 350 BIOMT2 39 -0.688191 0.500000 -0.525731 0.00000 REMARK 350 BIOMT3 39 -0.276393 -0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 40 0.447214 -0.525731 0.723607 0.00000 REMARK 350 BIOMT2 40 -0.850651 0.000000 0.525731 0.00000 REMARK 350 BIOMT3 40 -0.276393 -0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 41 -0.447214 -0.850651 0.276393 0.00000 REMARK 350 BIOMT2 41 0.525731 0.000000 0.850651 0.00000 REMARK 350 BIOMT3 41 -0.723607 0.525731 0.447214 0.00000 REMARK 350 BIOMT1 42 0.309017 -0.951057 0.000000 0.00000 REMARK 350 BIOMT2 42 0.951057 0.309017 0.000000 0.00000 REMARK 350 BIOMT3 42 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 43 0.361803 -0.587785 -0.723607 0.00000 REMARK 350 BIOMT2 43 0.262866 0.809017 -0.525731 0.00000 REMARK 350 BIOMT3 43 0.894427 0.000000 0.447214 0.00000 REMARK 350 BIOMT1 44 -0.361803 -0.262866 -0.894427 0.00000 REMARK 350 BIOMT2 44 -0.587785 0.809017 0.000000 0.00000 REMARK 350 BIOMT3 44 0.723607 0.525731 -0.447214 0.00000 REMARK 350 BIOMT1 45 -0.861803 -0.425326 -0.276393 0.00000 REMARK 350 BIOMT2 45 -0.425326 0.309017 0.850651 0.00000 REMARK 350 BIOMT3 45 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 46 -0.361803 0.262866 -0.894427 0.00000 REMARK 350 BIOMT2 46 0.587785 0.809017 0.000000 0.00000 REMARK 350 BIOMT3 46 0.723607 -0.525731 -0.447214 0.00000 REMARK 350 BIOMT1 47 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 47 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 47 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 48 -0.361803 -0.587785 0.723607 0.00000 REMARK 350 BIOMT2 48 -0.262866 0.809017 0.525731 0.00000 REMARK 350 BIOMT3 48 -0.894427 0.000000 -0.447214 0.00000 REMARK 350 BIOMT1 49 0.670820 -0.688191 0.276393 0.00000 REMARK 350 BIOMT2 49 0.162460 0.500000 0.850651 0.00000 REMARK 350 BIOMT3 49 -0.723607 -0.525731 0.447214 0.00000 REMARK 350 BIOMT1 50 0.670820 -0.162460 -0.723607 0.00000 REMARK 350 BIOMT2 50 0.688191 0.500000 0.525731 0.00000 REMARK 350 BIOMT3 50 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 51 0.947214 0.162460 -0.276393 0.00000 REMARK 350 BIOMT2 51 -0.162460 -0.500000 -0.850651 0.00000 REMARK 350 BIOMT3 51 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 52 0.052787 0.688191 -0.723607 0.00000 REMARK 350 BIOMT2 52 -0.688191 -0.500000 -0.525731 0.00000 REMARK 350 BIOMT3 52 -0.723607 0.525731 0.447213 0.00000 REMARK 350 BIOMT1 53 -0.809017 0.587785 0.000000 0.00000 REMARK 350 BIOMT2 53 -0.587785 -0.809017 0.000000 0.00000 REMARK 350 BIOMT3 53 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 54 -0.447214 0.000000 0.894427 0.00000 REMARK 350 BIOMT2 54 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 54 0.894427 0.000000 0.447214 0.00000 REMARK 350 BIOMT1 55 0.638196 -0.262866 0.723607 0.00000 REMARK 350 BIOMT2 55 0.262866 -0.809017 -0.525731 0.00000 REMARK 350 BIOMT3 55 0.723607 0.525731 -0.447213 0.00000 REMARK 350 BIOMT1 56 -0.138197 0.425326 0.894427 0.00000 REMARK 350 BIOMT2 56 -0.951057 -0.309017 0.000000 0.00000 REMARK 350 BIOMT3 56 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 57 0.638196 0.262866 0.723607 0.00000 REMARK 350 BIOMT2 57 -0.262866 -0.809017 0.525731 0.00000 REMARK 350 BIOMT3 57 0.723607 -0.525731 -0.447213 0.00000 REMARK 350 BIOMT1 58 0.809017 0.587785 0.000000 0.00000 REMARK 350 BIOMT2 58 0.587785 -0.809017 0.000000 0.00000 REMARK 350 BIOMT3 58 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 59 0.138197 0.951057 -0.276393 0.00000 REMARK 350 BIOMT2 59 0.425326 -0.309017 -0.850651 0.00000 REMARK 350 BIOMT3 59 -0.894427 0.000000 -0.447214 0.00000 REMARK 350 BIOMT1 60 -0.447214 0.850651 0.276393 0.00000 REMARK 350 BIOMT2 60 -0.525731 0.000000 -0.850651 0.00000 REMARK 350 BIOMT3 60 -0.723607 -0.525731 0.447214 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 147 REMARK 465 HIS A 148 REMARK 465 SER A 149 REMARK 465 GLY A 150 REMARK 465 MET A 151 REMARK 465 ILE A 152 REMARK 465 VAL A 153 REMARK 465 ASN A 154 REMARK 465 ASP A 155 REMARK 465 THR A 156 REMARK 465 GLY A 157 REMARK 465 HIS A 158 REMARK 465 GLU A 159 REMARK 465 THR A 160 REMARK 465 ASP A 161 REMARK 465 GLN C 147 REMARK 465 HIS C 148 REMARK 465 SER C 149 REMARK 465 GLY C 150 REMARK 465 MET C 151 REMARK 465 ILE C 152 REMARK 465 VAL C 153 REMARK 465 ASN C 154 REMARK 465 ASP C 155 REMARK 465 THR C 156 REMARK 465 GLY C 157 REMARK 465 HIS C 158 REMARK 465 GLU C 159 REMARK 465 THR C 160 REMARK 465 ASP C 161 REMARK 465 GLN B 147 REMARK 465 HIS B 148 REMARK 465 SER B 149 REMARK 465 GLY B 150 REMARK 465 MET B 151 REMARK 465 ILE B 152 REMARK 465 VAL B 153 REMARK 465 ASN B 154 REMARK 465 ASP B 155 REMARK 465 THR B 156 REMARK 465 GLY B 157 REMARK 465 HIS B 158 REMARK 465 GLU B 159 REMARK 465 THR B 160 REMARK 465 ASP B 161 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CA ASP A 230 CA GLY B 78 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-6793 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF ZIKA VIRUS COMPLEXED WITH FAB OF ZKA190 AT PH REMARK 900 8.0 AND 37 CELSIUS DEGREE DBREF1 5Y0A A 1 403 UNP A0A1V0E2E9_ZIKV DBREF2 5Y0A A A0A1V0E2E9 291 693 DBREF1 5Y0A C 1 403 UNP A0A1V0E2E9_ZIKV DBREF2 5Y0A C A0A1V0E2E9 291 693 DBREF1 5Y0A B 1 403 UNP A0A1V0E2E9_ZIKV DBREF2 5Y0A B A0A1V0E2E9 291 693 DBREF 5Y0A H 1 129 PDB 5Y0A 5Y0A 1 129 DBREF 5Y0A L 1 108 PDB 5Y0A 5Y0A 1 108 DBREF 5Y0A F 1 129 PDB 5Y0A 5Y0A 1 129 DBREF 5Y0A G 1 108 PDB 5Y0A 5Y0A 1 108 DBREF 5Y0A D 1 129 PDB 5Y0A 5Y0A 1 129 DBREF 5Y0A E 1 108 PDB 5Y0A 5Y0A 1 108 SEQRES 1 A 403 ILE ARG CYS ILE GLY VAL SER ASN ARG ASP PHE VAL GLU SEQRES 2 A 403 GLY MET SER GLY GLY THR TRP VAL ASP VAL VAL LEU GLU SEQRES 3 A 403 HIS GLY GLY CYS VAL THR VAL MET ALA GLN ASP LYS PRO SEQRES 4 A 403 THR VAL ASP ILE GLU LEU VAL THR THR THR VAL SER ASN SEQRES 5 A 403 MET ALA GLU VAL ARG SER TYR CYS TYR GLU ALA SER ILE SEQRES 6 A 403 SER ASP MET ALA SER ASP SER ARG CYS PRO THR GLN GLY SEQRES 7 A 403 GLU ALA TYR LEU ASP LYS GLN SER ASP THR GLN TYR VAL SEQRES 8 A 403 CYS LYS ARG THR LEU VAL ASP ARG GLY TRP GLY ASN GLY SEQRES 9 A 403 CYS GLY LEU PHE GLY LYS GLY SER LEU VAL THR CYS ALA SEQRES 10 A 403 LYS PHE ALA CYS SER LYS LYS MET THR GLY LYS SER ILE SEQRES 11 A 403 GLN PRO GLU ASN LEU GLU TYR ARG ILE MET LEU SER VAL SEQRES 12 A 403 HIS GLY SER GLN HIS SER GLY MET ILE VAL ASN ASP THR SEQRES 13 A 403 GLY HIS GLU THR ASP GLU ASN ARG ALA LYS VAL GLU ILE SEQRES 14 A 403 THR PRO ASN SER PRO ARG ALA GLU ALA THR LEU GLY GLY SEQRES 15 A 403 PHE GLY SER LEU GLY LEU ASP CYS GLU PRO ARG THR GLY SEQRES 16 A 403 LEU ASP PHE SER ASP LEU TYR TYR LEU THR MET ASN ASN SEQRES 17 A 403 LYS HIS TRP LEU VAL HIS LYS GLU TRP PHE HIS ASP ILE SEQRES 18 A 403 PRO LEU PRO TRP HIS ALA GLY ALA ASP THR GLY THR PRO SEQRES 19 A 403 HIS TRP ASN ASN LYS GLU ALA LEU VAL GLU PHE LYS ASP SEQRES 20 A 403 ALA HIS ALA LYS ARG GLN THR VAL VAL VAL LEU GLY SER SEQRES 21 A 403 GLN GLU GLY ALA VAL HIS THR ALA LEU ALA GLY ALA LEU SEQRES 22 A 403 GLU ALA GLU MET ASP GLY ALA LYS GLY ARG LEU SER SER SEQRES 23 A 403 GLY HIS LEU LYS CYS ARG LEU LYS MET ASP LYS LEU ARG SEQRES 24 A 403 LEU LYS GLY VAL SER TYR SER LEU CYS THR ALA ALA PHE SEQRES 25 A 403 THR PHE THR LYS ILE PRO ALA GLU THR LEU HIS GLY THR SEQRES 26 A 403 VAL THR VAL GLU VAL GLN TYR ALA GLY THR ASP GLY PRO SEQRES 27 A 403 CYS LYS VAL PRO ALA GLN MET ALA VAL ASP MET GLN THR SEQRES 28 A 403 LEU THR PRO VAL GLY ARG LEU ILE THR ALA ASN PRO VAL SEQRES 29 A 403 ILE THR GLU SER THR GLU ASN SER LYS MET MET LEU GLU SEQRES 30 A 403 LEU ASP PRO PRO PHE GLY ASP SER TYR ILE VAL ILE GLY SEQRES 31 A 403 VAL GLY GLU LYS LYS ILE THR HIS HIS TRP HIS ARG SER SEQRES 1 C 403 ILE ARG CYS ILE GLY VAL SER ASN ARG ASP PHE VAL GLU SEQRES 2 C 403 GLY MET SER GLY GLY THR TRP VAL ASP VAL VAL LEU GLU SEQRES 3 C 403 HIS GLY GLY CYS VAL THR VAL MET ALA GLN ASP LYS PRO SEQRES 4 C 403 THR VAL ASP ILE GLU LEU VAL THR THR THR VAL SER ASN SEQRES 5 C 403 MET ALA GLU VAL ARG SER TYR CYS TYR GLU ALA SER ILE SEQRES 6 C 403 SER ASP MET ALA SER ASP SER ARG CYS PRO THR GLN GLY SEQRES 7 C 403 GLU ALA TYR LEU ASP LYS GLN SER ASP THR GLN TYR VAL SEQRES 8 C 403 CYS LYS ARG THR LEU VAL ASP ARG GLY TRP GLY ASN GLY SEQRES 9 C 403 CYS GLY LEU PHE GLY LYS GLY SER LEU VAL THR CYS ALA SEQRES 10 C 403 LYS PHE ALA CYS SER LYS LYS MET THR GLY LYS SER ILE SEQRES 11 C 403 GLN PRO GLU ASN LEU GLU TYR ARG ILE MET LEU SER VAL SEQRES 12 C 403 HIS GLY SER GLN HIS SER GLY MET ILE VAL ASN ASP THR SEQRES 13 C 403 GLY HIS GLU THR ASP GLU ASN ARG ALA LYS VAL GLU ILE SEQRES 14 C 403 THR PRO ASN SER PRO ARG ALA GLU ALA THR LEU GLY GLY SEQRES 15 C 403 PHE GLY SER LEU GLY LEU ASP CYS GLU PRO ARG THR GLY SEQRES 16 C 403 LEU ASP PHE SER ASP LEU TYR TYR LEU THR MET ASN ASN SEQRES 17 C 403 LYS HIS TRP LEU VAL HIS LYS GLU TRP PHE HIS ASP ILE SEQRES 18 C 403 PRO LEU PRO TRP HIS ALA GLY ALA ASP THR GLY THR PRO SEQRES 19 C 403 HIS TRP ASN ASN LYS GLU ALA LEU VAL GLU PHE LYS ASP SEQRES 20 C 403 ALA HIS ALA LYS ARG GLN THR VAL VAL VAL LEU GLY SER SEQRES 21 C 403 GLN GLU GLY ALA VAL HIS THR ALA LEU ALA GLY ALA LEU SEQRES 22 C 403 GLU ALA GLU MET ASP GLY ALA LYS GLY ARG LEU SER SER SEQRES 23 C 403 GLY HIS LEU LYS CYS ARG LEU LYS MET ASP LYS LEU ARG SEQRES 24 C 403 LEU LYS GLY VAL SER TYR SER LEU CYS THR ALA ALA PHE SEQRES 25 C 403 THR PHE THR LYS ILE PRO ALA GLU THR LEU HIS GLY THR SEQRES 26 C 403 VAL THR VAL GLU VAL GLN TYR ALA GLY THR ASP GLY PRO SEQRES 27 C 403 CYS LYS VAL PRO ALA GLN MET ALA VAL ASP MET GLN THR SEQRES 28 C 403 LEU THR PRO VAL GLY ARG LEU ILE THR ALA ASN PRO VAL SEQRES 29 C 403 ILE THR GLU SER THR GLU ASN SER LYS MET MET LEU GLU SEQRES 30 C 403 LEU ASP PRO PRO PHE GLY ASP SER TYR ILE VAL ILE GLY SEQRES 31 C 403 VAL GLY GLU LYS LYS ILE THR HIS HIS TRP HIS ARG SER SEQRES 1 B 403 ILE ARG CYS ILE GLY VAL SER ASN ARG ASP PHE VAL GLU SEQRES 2 B 403 GLY MET SER GLY GLY THR TRP VAL ASP VAL VAL LEU GLU SEQRES 3 B 403 HIS GLY GLY CYS VAL THR VAL MET ALA GLN ASP LYS PRO SEQRES 4 B 403 THR VAL ASP ILE GLU LEU VAL THR THR THR VAL SER ASN SEQRES 5 B 403 MET ALA GLU VAL ARG SER TYR CYS TYR GLU ALA SER ILE SEQRES 6 B 403 SER ASP MET ALA SER ASP SER ARG CYS PRO THR GLN GLY SEQRES 7 B 403 GLU ALA TYR LEU ASP LYS GLN SER ASP THR GLN TYR VAL SEQRES 8 B 403 CYS LYS ARG THR LEU VAL ASP ARG GLY TRP GLY ASN GLY SEQRES 9 B 403 CYS GLY LEU PHE GLY LYS GLY SER LEU VAL THR CYS ALA SEQRES 10 B 403 LYS PHE ALA CYS SER LYS LYS MET THR GLY LYS SER ILE SEQRES 11 B 403 GLN PRO GLU ASN LEU GLU TYR ARG ILE MET LEU SER VAL SEQRES 12 B 403 HIS GLY SER GLN HIS SER GLY MET ILE VAL ASN ASP THR SEQRES 13 B 403 GLY HIS GLU THR ASP GLU ASN ARG ALA LYS VAL GLU ILE SEQRES 14 B 403 THR PRO ASN SER PRO ARG ALA GLU ALA THR LEU GLY GLY SEQRES 15 B 403 PHE GLY SER LEU GLY LEU ASP CYS GLU PRO ARG THR GLY SEQRES 16 B 403 LEU ASP PHE SER ASP LEU TYR TYR LEU THR MET ASN ASN SEQRES 17 B 403 LYS HIS TRP LEU VAL HIS LYS GLU TRP PHE HIS ASP ILE SEQRES 18 B 403 PRO LEU PRO TRP HIS ALA GLY ALA ASP THR GLY THR PRO SEQRES 19 B 403 HIS TRP ASN ASN LYS GLU ALA LEU VAL GLU PHE LYS ASP SEQRES 20 B 403 ALA HIS ALA LYS ARG GLN THR VAL VAL VAL LEU GLY SER SEQRES 21 B 403 GLN GLU GLY ALA VAL HIS THR ALA LEU ALA GLY ALA LEU SEQRES 22 B 403 GLU ALA GLU MET ASP GLY ALA LYS GLY ARG LEU SER SER SEQRES 23 B 403 GLY HIS LEU LYS CYS ARG LEU LYS MET ASP LYS LEU ARG SEQRES 24 B 403 LEU LYS GLY VAL SER TYR SER LEU CYS THR ALA ALA PHE SEQRES 25 B 403 THR PHE THR LYS ILE PRO ALA GLU THR LEU HIS GLY THR SEQRES 26 B 403 VAL THR VAL GLU VAL GLN TYR ALA GLY THR ASP GLY PRO SEQRES 27 B 403 CYS LYS VAL PRO ALA GLN MET ALA VAL ASP MET GLN THR SEQRES 28 B 403 LEU THR PRO VAL GLY ARG LEU ILE THR ALA ASN PRO VAL SEQRES 29 B 403 ILE THR GLU SER THR GLU ASN SER LYS MET MET LEU GLU SEQRES 30 B 403 LEU ASP PRO PRO PHE GLY ASP SER TYR ILE VAL ILE GLY SEQRES 31 B 403 VAL GLY GLU LYS LYS ILE THR HIS HIS TRP HIS ARG SER SEQRES 1 H 129 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 H 129 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 129 PHE THR PHE SER LYS TYR GLY MET HIS TRP VAL ARG GLN SEQRES 4 H 129 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA VAL ILE SER SEQRES 5 H 129 TYR GLU GLY SER ASN LYS TYR TYR ALA ASP SER VAL LYS SEQRES 6 H 129 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 H 129 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 129 ALA VAL TYR TYR CYS ALA LYS SER GLY THR GLN TYR TYR SEQRES 9 H 129 ASP THR THR GLY TYR GLU TYR ARG GLY LEU GLU TYR PHE SEQRES 10 H 129 GLY TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 1 L 108 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 L 108 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 108 GLN SER VAL SER SER SER TYR LEU ALA TRP TYR GLN GLN SEQRES 4 L 108 LYS ARG GLY GLN ALA PRO ARG LEU LEU ILE TYR ASP ALA SEQRES 5 L 108 SER SER ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 L 108 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 L 108 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 L 108 TYR GLY ARG SER ARG TRP THR PHE GLY GLN GLY THR LYS SEQRES 9 L 108 VAL GLU ILE LYS SEQRES 1 F 129 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 F 129 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 F 129 PHE THR PHE SER LYS TYR GLY MET HIS TRP VAL ARG GLN SEQRES 4 F 129 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA VAL ILE SER SEQRES 5 F 129 TYR GLU GLY SER ASN LYS TYR TYR ALA ASP SER VAL LYS SEQRES 6 F 129 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 F 129 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 F 129 ALA VAL TYR TYR CYS ALA LYS SER GLY THR GLN TYR TYR SEQRES 9 F 129 ASP THR THR GLY TYR GLU TYR ARG GLY LEU GLU TYR PHE SEQRES 10 F 129 GLY TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 1 G 108 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 G 108 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 G 108 GLN SER VAL SER SER SER TYR LEU ALA TRP TYR GLN GLN SEQRES 4 G 108 LYS ARG GLY GLN ALA PRO ARG LEU LEU ILE TYR ASP ALA SEQRES 5 G 108 SER SER ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 G 108 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 G 108 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 G 108 TYR GLY ARG SER ARG TRP THR PHE GLY GLN GLY THR LYS SEQRES 9 G 108 VAL GLU ILE LYS SEQRES 1 D 129 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 D 129 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 D 129 PHE THR PHE SER LYS TYR GLY MET HIS TRP VAL ARG GLN SEQRES 4 D 129 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA VAL ILE SER SEQRES 5 D 129 TYR GLU GLY SER ASN LYS TYR TYR ALA ASP SER VAL LYS SEQRES 6 D 129 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 D 129 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 D 129 ALA VAL TYR TYR CYS ALA LYS SER GLY THR GLN TYR TYR SEQRES 9 D 129 ASP THR THR GLY TYR GLU TYR ARG GLY LEU GLU TYR PHE SEQRES 10 D 129 GLY TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 1 E 108 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 E 108 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 E 108 GLN SER VAL SER SER SER TYR LEU ALA TRP TYR GLN GLN SEQRES 4 E 108 LYS ARG GLY GLN ALA PRO ARG LEU LEU ILE TYR ASP ALA SEQRES 5 E 108 SER SER ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 E 108 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 E 108 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 E 108 TYR GLY ARG SER ARG TRP THR PHE GLY GLN GLY THR LYS SEQRES 9 E 108 VAL GLU ILE LYS CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000