data_5Y25 # _entry.id 5Y25 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5Y25 pdb_00005y25 10.2210/pdb5y25/pdb WWPDB D_1300004534 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-07-25 2 'Structure model' 1 1 2019-08-07 3 'Structure model' 1 2 2023-11-22 4 'Structure model' 1 3 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' pdbx_entry_details 8 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5Y25 _pdbx_database_status.recvd_initial_deposition_date 2017-07-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Shiroishi, M.' 1 ? 'Abe, Y.' 2 ? 'Caaveiro, J.M.M.' 3 ? 'Sakamoto, S.' 4 ? 'Morimoto, S.' 5 ? 'Fuchida, H.' 6 ? 'Shindo, N.' 7 ? 'Ojida, A.' 8 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1552-4469 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 250 _citation.page_last 258 _citation.title 'Selective and reversible modification of kinase cysteines with chlorofluoroacetamides.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41589-018-0204-3 _citation.pdbx_database_id_PubMed 30643284 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shindo, N.' 1 0000-0002-2374-9896 primary 'Fuchida, H.' 2 ? primary 'Sato, M.' 3 ? primary 'Watari, K.' 4 ? primary 'Shibata, T.' 5 ? primary 'Kuwata, K.' 6 ? primary 'Miura, C.' 7 ? primary 'Okamoto, K.' 8 ? primary 'Hatsuyama, Y.' 9 ? primary 'Tokunaga, K.' 10 ? primary 'Sakamoto, S.' 11 0000-0001-6871-522X primary 'Morimoto, S.' 12 ? primary 'Abe, Y.' 13 ? primary 'Shiroishi, M.' 14 ? primary 'Caaveiro, J.M.M.' 15 0000-0001-5568-2369 primary 'Ueda, T.' 16 ? primary 'Tamura, T.' 17 0000-0003-1648-9296 primary 'Matsunaga, N.' 18 ? primary 'Nakao, T.' 19 ? primary 'Koyanagi, S.' 20 ? primary 'Ohdo, S.' 21 ? primary 'Yamaguchi, Y.' 22 ? primary 'Hamachi, I.' 23 ? primary 'Ono, M.' 24 ? primary 'Ojida, A.' 25 0000-0002-9440-8167 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Epidermal growth factor receptor' 38152.160 1 2.7.10.1 'T790M, L858R' 'Kinase domain, UNP residues 698-1022' ? 2 non-polymer syn ;(2R)-N-[4-[(3-chloranyl-4-fluoranyl-phenyl)amino]-7-(3-morpholin-4-ylpropoxy)quinazolin-6-yl]-1-(2-fluoranylethanoyl)pyrrolidine-2-carboxamide ; 589.033 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Proto-oncogene c-ErbB-1,Receptor tyrosine-protein kinase erbB-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEEDMDDV VDADEYLIPQQG ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEEDMDDV VDADEYLIPQQG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name ;(2R)-N-[4-[(3-chloranyl-4-fluoranyl-phenyl)amino]-7-(3-morpholin-4-ylpropoxy)quinazolin-6-yl]-1-(2-fluoranylethanoyl)pyrrolidine-2-carboxamide ; _pdbx_entity_nonpoly.comp_id 8LU # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 ALA n 1 9 PRO n 1 10 ASN n 1 11 GLN n 1 12 ALA n 1 13 LEU n 1 14 LEU n 1 15 ARG n 1 16 ILE n 1 17 LEU n 1 18 LYS n 1 19 GLU n 1 20 THR n 1 21 GLU n 1 22 PHE n 1 23 LYS n 1 24 LYS n 1 25 ILE n 1 26 LYS n 1 27 VAL n 1 28 LEU n 1 29 GLY n 1 30 SER n 1 31 GLY n 1 32 ALA n 1 33 PHE n 1 34 GLY n 1 35 THR n 1 36 VAL n 1 37 TYR n 1 38 LYS n 1 39 GLY n 1 40 LEU n 1 41 TRP n 1 42 ILE n 1 43 PRO n 1 44 GLU n 1 45 GLY n 1 46 GLU n 1 47 LYS n 1 48 VAL n 1 49 LYS n 1 50 ILE n 1 51 PRO n 1 52 VAL n 1 53 ALA n 1 54 ILE n 1 55 LYS n 1 56 GLU n 1 57 LEU n 1 58 ARG n 1 59 GLU n 1 60 ALA n 1 61 THR n 1 62 SER n 1 63 PRO n 1 64 LYS n 1 65 ALA n 1 66 ASN n 1 67 LYS n 1 68 GLU n 1 69 ILE n 1 70 LEU n 1 71 ASP n 1 72 GLU n 1 73 ALA n 1 74 TYR n 1 75 VAL n 1 76 MET n 1 77 ALA n 1 78 SER n 1 79 VAL n 1 80 ASP n 1 81 ASN n 1 82 PRO n 1 83 HIS n 1 84 VAL n 1 85 CYS n 1 86 ARG n 1 87 LEU n 1 88 LEU n 1 89 GLY n 1 90 ILE n 1 91 CYS n 1 92 LEU n 1 93 THR n 1 94 SER n 1 95 THR n 1 96 VAL n 1 97 GLN n 1 98 LEU n 1 99 ILE n 1 100 MET n 1 101 GLN n 1 102 LEU n 1 103 MET n 1 104 PRO n 1 105 PHE n 1 106 GLY n 1 107 CYS n 1 108 LEU n 1 109 LEU n 1 110 ASP n 1 111 TYR n 1 112 VAL n 1 113 ARG n 1 114 GLU n 1 115 HIS n 1 116 LYS n 1 117 ASP n 1 118 ASN n 1 119 ILE n 1 120 GLY n 1 121 SER n 1 122 GLN n 1 123 TYR n 1 124 LEU n 1 125 LEU n 1 126 ASN n 1 127 TRP n 1 128 CYS n 1 129 VAL n 1 130 GLN n 1 131 ILE n 1 132 ALA n 1 133 LYS n 1 134 GLY n 1 135 MET n 1 136 ASN n 1 137 TYR n 1 138 LEU n 1 139 GLU n 1 140 ASP n 1 141 ARG n 1 142 ARG n 1 143 LEU n 1 144 VAL n 1 145 HIS n 1 146 ARG n 1 147 ASP n 1 148 LEU n 1 149 ALA n 1 150 ALA n 1 151 ARG n 1 152 ASN n 1 153 VAL n 1 154 LEU n 1 155 VAL n 1 156 LYS n 1 157 THR n 1 158 PRO n 1 159 GLN n 1 160 HIS n 1 161 VAL n 1 162 LYS n 1 163 ILE n 1 164 THR n 1 165 ASP n 1 166 PHE n 1 167 GLY n 1 168 ARG n 1 169 ALA n 1 170 LYS n 1 171 LEU n 1 172 LEU n 1 173 GLY n 1 174 ALA n 1 175 GLU n 1 176 GLU n 1 177 LYS n 1 178 GLU n 1 179 TYR n 1 180 HIS n 1 181 ALA n 1 182 GLU n 1 183 GLY n 1 184 GLY n 1 185 LYS n 1 186 VAL n 1 187 PRO n 1 188 ILE n 1 189 LYS n 1 190 TRP n 1 191 MET n 1 192 ALA n 1 193 LEU n 1 194 GLU n 1 195 SER n 1 196 ILE n 1 197 LEU n 1 198 HIS n 1 199 ARG n 1 200 ILE n 1 201 TYR n 1 202 THR n 1 203 HIS n 1 204 GLN n 1 205 SER n 1 206 ASP n 1 207 VAL n 1 208 TRP n 1 209 SER n 1 210 TYR n 1 211 GLY n 1 212 VAL n 1 213 THR n 1 214 VAL n 1 215 TRP n 1 216 GLU n 1 217 LEU n 1 218 MET n 1 219 THR n 1 220 PHE n 1 221 GLY n 1 222 SER n 1 223 LYS n 1 224 PRO n 1 225 TYR n 1 226 ASP n 1 227 GLY n 1 228 ILE n 1 229 PRO n 1 230 ALA n 1 231 SER n 1 232 GLU n 1 233 ILE n 1 234 SER n 1 235 SER n 1 236 ILE n 1 237 LEU n 1 238 GLU n 1 239 LYS n 1 240 GLY n 1 241 GLU n 1 242 ARG n 1 243 LEU n 1 244 PRO n 1 245 GLN n 1 246 PRO n 1 247 PRO n 1 248 ILE n 1 249 CYS n 1 250 THR n 1 251 ILE n 1 252 ASP n 1 253 VAL n 1 254 TYR n 1 255 MET n 1 256 ILE n 1 257 MET n 1 258 VAL n 1 259 LYS n 1 260 CYS n 1 261 TRP n 1 262 MET n 1 263 ILE n 1 264 ASP n 1 265 ALA n 1 266 ASP n 1 267 SER n 1 268 ARG n 1 269 PRO n 1 270 LYS n 1 271 PHE n 1 272 ARG n 1 273 GLU n 1 274 LEU n 1 275 ILE n 1 276 ILE n 1 277 GLU n 1 278 PHE n 1 279 SER n 1 280 LYS n 1 281 MET n 1 282 ALA n 1 283 ARG n 1 284 ASP n 1 285 PRO n 1 286 GLN n 1 287 ARG n 1 288 TYR n 1 289 LEU n 1 290 VAL n 1 291 ILE n 1 292 GLN n 1 293 GLY n 1 294 ASP n 1 295 GLU n 1 296 ARG n 1 297 MET n 1 298 HIS n 1 299 LEU n 1 300 PRO n 1 301 SER n 1 302 PRO n 1 303 THR n 1 304 ASP n 1 305 SER n 1 306 ASN n 1 307 PHE n 1 308 TYR n 1 309 ARG n 1 310 ALA n 1 311 LEU n 1 312 MET n 1 313 ASP n 1 314 GLU n 1 315 GLU n 1 316 ASP n 1 317 MET n 1 318 ASP n 1 319 ASP n 1 320 VAL n 1 321 VAL n 1 322 ASP n 1 323 ALA n 1 324 ASP n 1 325 GLU n 1 326 TYR n 1 327 LEU n 1 328 ILE n 1 329 PRO n 1 330 GLN n 1 331 GLN n 1 332 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 332 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'EGFR, ERBB, ERBB1, HER1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8LU non-polymer . ;(2R)-N-[4-[(3-chloranyl-4-fluoranyl-phenyl)amino]-7-(3-morpholin-4-ylpropoxy)quinazolin-6-yl]-1-(2-fluoranylethanoyl)pyrrolidine-2-carboxamide ; ? 'C28 H31 Cl F2 N6 O4' 589.033 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 691 ? ? ? A . n A 1 2 HIS 2 692 ? ? ? A . n A 1 3 HIS 3 693 ? ? ? A . n A 1 4 HIS 4 694 ? ? ? A . n A 1 5 HIS 5 695 ? ? ? A . n A 1 6 HIS 6 696 ? ? ? A . n A 1 7 HIS 7 697 697 HIS HIS A . n A 1 8 ALA 8 698 698 ALA ALA A . n A 1 9 PRO 9 699 699 PRO PRO A . n A 1 10 ASN 10 700 700 ASN ASN A . n A 1 11 GLN 11 701 701 GLN GLN A . n A 1 12 ALA 12 702 702 ALA ALA A . n A 1 13 LEU 13 703 703 LEU LEU A . n A 1 14 LEU 14 704 704 LEU LEU A . n A 1 15 ARG 15 705 705 ARG ARG A . n A 1 16 ILE 16 706 706 ILE ILE A . n A 1 17 LEU 17 707 707 LEU LEU A . n A 1 18 LYS 18 708 708 LYS LYS A . n A 1 19 GLU 19 709 709 GLU GLU A . n A 1 20 THR 20 710 710 THR THR A . n A 1 21 GLU 21 711 711 GLU GLU A . n A 1 22 PHE 22 712 712 PHE PHE A . n A 1 23 LYS 23 713 713 LYS LYS A . n A 1 24 LYS 24 714 714 LYS LYS A . n A 1 25 ILE 25 715 715 ILE ILE A . n A 1 26 LYS 26 716 716 LYS LYS A . n A 1 27 VAL 27 717 717 VAL VAL A . n A 1 28 LEU 28 718 718 LEU LEU A . n A 1 29 GLY 29 719 719 GLY GLY A . n A 1 30 SER 30 720 720 SER SER A . n A 1 31 GLY 31 721 721 GLY GLY A . n A 1 32 ALA 32 722 722 ALA ALA A . n A 1 33 PHE 33 723 723 PHE PHE A . n A 1 34 GLY 34 724 724 GLY GLY A . n A 1 35 THR 35 725 725 THR THR A . n A 1 36 VAL 36 726 726 VAL VAL A . n A 1 37 TYR 37 727 727 TYR TYR A . n A 1 38 LYS 38 728 728 LYS LYS A . n A 1 39 GLY 39 729 729 GLY GLY A . n A 1 40 LEU 40 730 730 LEU LEU A . n A 1 41 TRP 41 731 731 TRP TRP A . n A 1 42 ILE 42 732 732 ILE ILE A . n A 1 43 PRO 43 733 733 PRO PRO A . n A 1 44 GLU 44 734 734 GLU GLU A . n A 1 45 GLY 45 735 735 GLY GLY A . n A 1 46 GLU 46 736 736 GLU GLU A . n A 1 47 LYS 47 737 737 LYS LYS A . n A 1 48 VAL 48 738 738 VAL VAL A . n A 1 49 LYS 49 739 739 LYS LYS A . n A 1 50 ILE 50 740 740 ILE ILE A . n A 1 51 PRO 51 741 741 PRO PRO A . n A 1 52 VAL 52 742 742 VAL VAL A . n A 1 53 ALA 53 743 743 ALA ALA A . n A 1 54 ILE 54 744 744 ILE ILE A . n A 1 55 LYS 55 745 745 LYS LYS A . n A 1 56 GLU 56 746 746 GLU GLU A . n A 1 57 LEU 57 747 747 LEU LEU A . n A 1 58 ARG 58 748 ? ? ? A . n A 1 59 GLU 59 749 ? ? ? A . n A 1 60 ALA 60 750 ? ? ? A . n A 1 61 THR 61 751 751 THR THR A . n A 1 62 SER 62 752 752 SER SER A . n A 1 63 PRO 63 753 753 PRO PRO A . n A 1 64 LYS 64 754 754 LYS LYS A . n A 1 65 ALA 65 755 755 ALA ALA A . n A 1 66 ASN 66 756 756 ASN ASN A . n A 1 67 LYS 67 757 757 LYS LYS A . n A 1 68 GLU 68 758 758 GLU GLU A . n A 1 69 ILE 69 759 759 ILE ILE A . n A 1 70 LEU 70 760 760 LEU LEU A . n A 1 71 ASP 71 761 761 ASP ASP A . n A 1 72 GLU 72 762 762 GLU GLU A . n A 1 73 ALA 73 763 763 ALA ALA A . n A 1 74 TYR 74 764 764 TYR TYR A . n A 1 75 VAL 75 765 765 VAL VAL A . n A 1 76 MET 76 766 766 MET MET A . n A 1 77 ALA 77 767 767 ALA ALA A . n A 1 78 SER 78 768 768 SER SER A . n A 1 79 VAL 79 769 769 VAL VAL A . n A 1 80 ASP 80 770 770 ASP ASP A . n A 1 81 ASN 81 771 771 ASN ASN A . n A 1 82 PRO 82 772 772 PRO PRO A . n A 1 83 HIS 83 773 773 HIS HIS A . n A 1 84 VAL 84 774 774 VAL VAL A . n A 1 85 CYS 85 775 775 CYS CYS A . n A 1 86 ARG 86 776 776 ARG ARG A . n A 1 87 LEU 87 777 777 LEU LEU A . n A 1 88 LEU 88 778 778 LEU LEU A . n A 1 89 GLY 89 779 779 GLY GLY A . n A 1 90 ILE 90 780 780 ILE ILE A . n A 1 91 CYS 91 781 781 CYS CYS A . n A 1 92 LEU 92 782 782 LEU LEU A . n A 1 93 THR 93 783 783 THR THR A . n A 1 94 SER 94 784 784 SER SER A . n A 1 95 THR 95 785 785 THR THR A . n A 1 96 VAL 96 786 786 VAL VAL A . n A 1 97 GLN 97 787 787 GLN GLN A . n A 1 98 LEU 98 788 788 LEU LEU A . n A 1 99 ILE 99 789 789 ILE ILE A . n A 1 100 MET 100 790 790 MET MET A . n A 1 101 GLN 101 791 791 GLN GLN A . n A 1 102 LEU 102 792 792 LEU LEU A . n A 1 103 MET 103 793 793 MET MET A . n A 1 104 PRO 104 794 794 PRO PRO A . n A 1 105 PHE 105 795 795 PHE PHE A . n A 1 106 GLY 106 796 796 GLY GLY A . n A 1 107 CYS 107 797 797 CYS CYS A . n A 1 108 LEU 108 798 798 LEU LEU A . n A 1 109 LEU 109 799 799 LEU LEU A . n A 1 110 ASP 110 800 800 ASP ASP A . n A 1 111 TYR 111 801 801 TYR TYR A . n A 1 112 VAL 112 802 802 VAL VAL A . n A 1 113 ARG 113 803 803 ARG ARG A . n A 1 114 GLU 114 804 804 GLU GLU A . n A 1 115 HIS 115 805 805 HIS HIS A . n A 1 116 LYS 116 806 806 LYS LYS A . n A 1 117 ASP 117 807 807 ASP ASP A . n A 1 118 ASN 118 808 808 ASN ASN A . n A 1 119 ILE 119 809 809 ILE ILE A . n A 1 120 GLY 120 810 810 GLY GLY A . n A 1 121 SER 121 811 811 SER SER A . n A 1 122 GLN 122 812 812 GLN GLN A . n A 1 123 TYR 123 813 813 TYR TYR A . n A 1 124 LEU 124 814 814 LEU LEU A . n A 1 125 LEU 125 815 815 LEU LEU A . n A 1 126 ASN 126 816 816 ASN ASN A . n A 1 127 TRP 127 817 817 TRP TRP A . n A 1 128 CYS 128 818 818 CYS CYS A . n A 1 129 VAL 129 819 819 VAL VAL A . n A 1 130 GLN 130 820 820 GLN GLN A . n A 1 131 ILE 131 821 821 ILE ILE A . n A 1 132 ALA 132 822 822 ALA ALA A . n A 1 133 LYS 133 823 823 LYS LYS A . n A 1 134 GLY 134 824 824 GLY GLY A . n A 1 135 MET 135 825 825 MET MET A . n A 1 136 ASN 136 826 826 ASN ASN A . n A 1 137 TYR 137 827 827 TYR TYR A . n A 1 138 LEU 138 828 828 LEU LEU A . n A 1 139 GLU 139 829 829 GLU GLU A . n A 1 140 ASP 140 830 830 ASP ASP A . n A 1 141 ARG 141 831 831 ARG ARG A . n A 1 142 ARG 142 832 832 ARG ARG A . n A 1 143 LEU 143 833 833 LEU LEU A . n A 1 144 VAL 144 834 834 VAL VAL A . n A 1 145 HIS 145 835 835 HIS HIS A . n A 1 146 ARG 146 836 836 ARG ARG A . n A 1 147 ASP 147 837 837 ASP ASP A . n A 1 148 LEU 148 838 838 LEU LEU A . n A 1 149 ALA 149 839 839 ALA ALA A . n A 1 150 ALA 150 840 840 ALA ALA A . n A 1 151 ARG 151 841 841 ARG ARG A . n A 1 152 ASN 152 842 842 ASN ASN A . n A 1 153 VAL 153 843 843 VAL VAL A . n A 1 154 LEU 154 844 844 LEU LEU A . n A 1 155 VAL 155 845 845 VAL VAL A . n A 1 156 LYS 156 846 846 LYS LYS A . n A 1 157 THR 157 847 847 THR THR A . n A 1 158 PRO 158 848 848 PRO PRO A . n A 1 159 GLN 159 849 849 GLN GLN A . n A 1 160 HIS 160 850 850 HIS HIS A . n A 1 161 VAL 161 851 851 VAL VAL A . n A 1 162 LYS 162 852 852 LYS LYS A . n A 1 163 ILE 163 853 853 ILE ILE A . n A 1 164 THR 164 854 854 THR THR A . n A 1 165 ASP 165 855 855 ASP ASP A . n A 1 166 PHE 166 856 856 PHE PHE A . n A 1 167 GLY 167 857 857 GLY GLY A . n A 1 168 ARG 168 858 858 ARG ARG A . n A 1 169 ALA 169 859 859 ALA ALA A . n A 1 170 LYS 170 860 ? ? ? A . n A 1 171 LEU 171 861 ? ? ? A . n A 1 172 LEU 172 862 ? ? ? A . n A 1 173 GLY 173 863 ? ? ? A . n A 1 174 ALA 174 864 ? ? ? A . n A 1 175 GLU 175 865 ? ? ? A . n A 1 176 GLU 176 866 ? ? ? A . n A 1 177 LYS 177 867 ? ? ? A . n A 1 178 GLU 178 868 ? ? ? A . n A 1 179 TYR 179 869 ? ? ? A . n A 1 180 HIS 180 870 ? ? ? A . n A 1 181 ALA 181 871 ? ? ? A . n A 1 182 GLU 182 872 ? ? ? A . n A 1 183 GLY 183 873 ? ? ? A . n A 1 184 GLY 184 874 ? ? ? A . n A 1 185 LYS 185 875 ? ? ? A . n A 1 186 VAL 186 876 876 VAL VAL A . n A 1 187 PRO 187 877 877 PRO PRO A . n A 1 188 ILE 188 878 878 ILE ILE A . n A 1 189 LYS 189 879 879 LYS LYS A . n A 1 190 TRP 190 880 880 TRP TRP A . n A 1 191 MET 191 881 881 MET MET A . n A 1 192 ALA 192 882 882 ALA ALA A . n A 1 193 LEU 193 883 883 LEU LEU A . n A 1 194 GLU 194 884 884 GLU GLU A . n A 1 195 SER 195 885 885 SER SER A . n A 1 196 ILE 196 886 886 ILE ILE A . n A 1 197 LEU 197 887 887 LEU LEU A . n A 1 198 HIS 198 888 888 HIS HIS A . n A 1 199 ARG 199 889 889 ARG ARG A . n A 1 200 ILE 200 890 890 ILE ILE A . n A 1 201 TYR 201 891 891 TYR TYR A . n A 1 202 THR 202 892 892 THR THR A . n A 1 203 HIS 203 893 893 HIS HIS A . n A 1 204 GLN 204 894 894 GLN GLN A . n A 1 205 SER 205 895 895 SER SER A . n A 1 206 ASP 206 896 896 ASP ASP A . n A 1 207 VAL 207 897 897 VAL VAL A . n A 1 208 TRP 208 898 898 TRP TRP A . n A 1 209 SER 209 899 899 SER SER A . n A 1 210 TYR 210 900 900 TYR TYR A . n A 1 211 GLY 211 901 901 GLY GLY A . n A 1 212 VAL 212 902 902 VAL VAL A . n A 1 213 THR 213 903 903 THR THR A . n A 1 214 VAL 214 904 904 VAL VAL A . n A 1 215 TRP 215 905 905 TRP TRP A . n A 1 216 GLU 216 906 906 GLU GLU A . n A 1 217 LEU 217 907 907 LEU LEU A . n A 1 218 MET 218 908 908 MET MET A . n A 1 219 THR 219 909 909 THR THR A . n A 1 220 PHE 220 910 910 PHE PHE A . n A 1 221 GLY 221 911 911 GLY GLY A . n A 1 222 SER 222 912 912 SER SER A . n A 1 223 LYS 223 913 913 LYS LYS A . n A 1 224 PRO 224 914 914 PRO PRO A . n A 1 225 TYR 225 915 915 TYR TYR A . n A 1 226 ASP 226 916 916 ASP ASP A . n A 1 227 GLY 227 917 917 GLY GLY A . n A 1 228 ILE 228 918 918 ILE ILE A . n A 1 229 PRO 229 919 919 PRO PRO A . n A 1 230 ALA 230 920 920 ALA ALA A . n A 1 231 SER 231 921 921 SER SER A . n A 1 232 GLU 232 922 922 GLU GLU A . n A 1 233 ILE 233 923 923 ILE ILE A . n A 1 234 SER 234 924 924 SER SER A . n A 1 235 SER 235 925 925 SER SER A . n A 1 236 ILE 236 926 926 ILE ILE A . n A 1 237 LEU 237 927 927 LEU LEU A . n A 1 238 GLU 238 928 928 GLU GLU A . n A 1 239 LYS 239 929 929 LYS LYS A . n A 1 240 GLY 240 930 930 GLY GLY A . n A 1 241 GLU 241 931 931 GLU GLU A . n A 1 242 ARG 242 932 932 ARG ARG A . n A 1 243 LEU 243 933 933 LEU LEU A . n A 1 244 PRO 244 934 934 PRO PRO A . n A 1 245 GLN 245 935 935 GLN GLN A . n A 1 246 PRO 246 936 936 PRO PRO A . n A 1 247 PRO 247 937 937 PRO PRO A . n A 1 248 ILE 248 938 938 ILE ILE A . n A 1 249 CYS 249 939 939 CYS CYS A . n A 1 250 THR 250 940 940 THR THR A . n A 1 251 ILE 251 941 941 ILE ILE A . n A 1 252 ASP 252 942 942 ASP ASP A . n A 1 253 VAL 253 943 943 VAL VAL A . n A 1 254 TYR 254 944 944 TYR TYR A . n A 1 255 MET 255 945 945 MET MET A . n A 1 256 ILE 256 946 946 ILE ILE A . n A 1 257 MET 257 947 947 MET MET A . n A 1 258 VAL 258 948 948 VAL VAL A . n A 1 259 LYS 259 949 949 LYS LYS A . n A 1 260 CYS 260 950 950 CYS CYS A . n A 1 261 TRP 261 951 951 TRP TRP A . n A 1 262 MET 262 952 952 MET MET A . n A 1 263 ILE 263 953 953 ILE ILE A . n A 1 264 ASP 264 954 954 ASP ASP A . n A 1 265 ALA 265 955 955 ALA ALA A . n A 1 266 ASP 266 956 956 ASP ASP A . n A 1 267 SER 267 957 957 SER SER A . n A 1 268 ARG 268 958 958 ARG ARG A . n A 1 269 PRO 269 959 959 PRO PRO A . n A 1 270 LYS 270 960 960 LYS LYS A . n A 1 271 PHE 271 961 961 PHE PHE A . n A 1 272 ARG 272 962 962 ARG ARG A . n A 1 273 GLU 273 963 963 GLU GLU A . n A 1 274 LEU 274 964 964 LEU LEU A . n A 1 275 ILE 275 965 965 ILE ILE A . n A 1 276 ILE 276 966 966 ILE ILE A . n A 1 277 GLU 277 967 967 GLU GLU A . n A 1 278 PHE 278 968 968 PHE PHE A . n A 1 279 SER 279 969 969 SER SER A . n A 1 280 LYS 280 970 970 LYS LYS A . n A 1 281 MET 281 971 971 MET MET A . n A 1 282 ALA 282 972 972 ALA ALA A . n A 1 283 ARG 283 973 973 ARG ARG A . n A 1 284 ASP 284 974 974 ASP ASP A . n A 1 285 PRO 285 975 975 PRO PRO A . n A 1 286 GLN 286 976 976 GLN GLN A . n A 1 287 ARG 287 977 977 ARG ARG A . n A 1 288 TYR 288 978 978 TYR TYR A . n A 1 289 LEU 289 979 979 LEU LEU A . n A 1 290 VAL 290 980 980 VAL VAL A . n A 1 291 ILE 291 981 981 ILE ILE A . n A 1 292 GLN 292 982 982 GLN GLN A . n A 1 293 GLY 293 983 983 GLY GLY A . n A 1 294 ASP 294 984 984 ASP ASP A . n A 1 295 GLU 295 985 985 GLU GLU A . n A 1 296 ARG 296 986 986 ARG ARG A . n A 1 297 MET 297 987 987 MET MET A . n A 1 298 HIS 298 988 988 HIS HIS A . n A 1 299 LEU 299 989 989 LEU LEU A . n A 1 300 PRO 300 990 990 PRO PRO A . n A 1 301 SER 301 991 991 SER SER A . n A 1 302 PRO 302 992 992 PRO PRO A . n A 1 303 THR 303 993 993 THR THR A . n A 1 304 ASP 304 994 994 ASP ASP A . n A 1 305 SER 305 995 995 SER SER A . n A 1 306 ASN 306 996 996 ASN ASN A . n A 1 307 PHE 307 997 997 PHE PHE A . n A 1 308 TYR 308 998 ? ? ? A . n A 1 309 ARG 309 999 ? ? ? A . n A 1 310 ALA 310 1000 ? ? ? A . n A 1 311 LEU 311 1001 ? ? ? A . n A 1 312 MET 312 1002 ? ? ? A . n A 1 313 ASP 313 1003 ? ? ? A . n A 1 314 GLU 314 1004 ? ? ? A . n A 1 315 GLU 315 1005 ? ? ? A . n A 1 316 ASP 316 1006 ? ? ? A . n A 1 317 MET 317 1007 ? ? ? A . n A 1 318 ASP 318 1008 1008 ASP ASP A . n A 1 319 ASP 319 1009 1009 ASP ASP A . n A 1 320 VAL 320 1010 1010 VAL VAL A . n A 1 321 VAL 321 1011 1011 VAL VAL A . n A 1 322 ASP 322 1012 1012 ASP ASP A . n A 1 323 ALA 323 1013 1013 ALA ALA A . n A 1 324 ASP 324 1014 1014 ASP ASP A . n A 1 325 GLU 325 1015 1015 GLU GLU A . n A 1 326 TYR 326 1016 1016 TYR TYR A . n A 1 327 LEU 327 1017 1017 LEU LEU A . n A 1 328 ILE 328 1018 ? ? ? A . n A 1 329 PRO 329 1019 ? ? ? A . n A 1 330 GLN 330 1020 ? ? ? A . n A 1 331 GLN 331 1021 ? ? ? A . n A 1 332 GLY 332 1022 ? ? ? A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 8LU _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 8LU _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 8LU _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1100 _pdbx_nonpoly_scheme.auth_seq_num 1100 _pdbx_nonpoly_scheme.pdb_mon_id 8LU _pdbx_nonpoly_scheme.auth_mon_id UNK _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 716 ? CG ? A LYS 26 CG 2 1 Y 1 A LYS 716 ? CD ? A LYS 26 CD 3 1 Y 1 A LYS 716 ? CE ? A LYS 26 CE 4 1 Y 1 A LYS 716 ? NZ ? A LYS 26 NZ 5 1 Y 1 A GLU 734 ? CG ? A GLU 44 CG 6 1 Y 1 A GLU 734 ? CD ? A GLU 44 CD 7 1 Y 1 A GLU 734 ? OE1 ? A GLU 44 OE1 8 1 Y 1 A GLU 734 ? OE2 ? A GLU 44 OE2 9 1 Y 1 A LYS 754 ? CG ? A LYS 64 CG 10 1 Y 1 A LYS 754 ? CD ? A LYS 64 CD 11 1 Y 1 A LYS 754 ? CE ? A LYS 64 CE 12 1 Y 1 A LYS 754 ? NZ ? A LYS 64 NZ 13 1 Y 1 A ARG 858 ? NE ? A ARG 168 NE 14 1 Y 1 A ARG 858 ? CZ ? A ARG 168 CZ 15 1 Y 1 A ARG 858 ? NH1 ? A ARG 168 NH1 16 1 Y 1 A ARG 858 ? NH2 ? A ARG 168 NH2 17 1 Y 1 A LYS 960 ? CD ? A LYS 270 CD 18 1 Y 1 A LYS 960 ? CE ? A LYS 270 CE 19 1 Y 1 A LYS 960 ? NZ ? A LYS 270 NZ 20 1 Y 1 A ARG 986 ? CG ? A ARG 296 CG 21 1 Y 1 A ARG 986 ? CD ? A ARG 296 CD 22 1 Y 1 A ARG 986 ? NE ? A ARG 296 NE 23 1 Y 1 A ARG 986 ? CZ ? A ARG 296 CZ 24 1 Y 1 A ARG 986 ? NH1 ? A ARG 296 NH1 25 1 Y 1 A ARG 986 ? NH2 ? A ARG 296 NH2 26 1 Y 1 A HIS 988 ? CG ? A HIS 298 CG 27 1 Y 1 A HIS 988 ? ND1 ? A HIS 298 ND1 28 1 Y 1 A HIS 988 ? CD2 ? A HIS 298 CD2 29 1 Y 1 A HIS 988 ? CE1 ? A HIS 298 CE1 30 1 Y 1 A HIS 988 ? NE2 ? A HIS 298 NE2 31 1 Y 1 A ASP 994 ? CG ? A ASP 304 CG 32 1 Y 1 A ASP 994 ? OD1 ? A ASP 304 OD1 33 1 Y 1 A ASP 994 ? OD2 ? A ASP 304 OD2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10.1_2155 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10.1_2155 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5Y25 _cell.details ? _cell.formula_units_Z ? _cell.length_a 148.291 _cell.length_a_esd ? _cell.length_b 148.291 _cell.length_b_esd ? _cell.length_c 148.291 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y25 _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5Y25 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.56 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 69.64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM HEPES pH7.5, 10% PEG 10000, 8% ethylene glycol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-07-05 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL26B1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL26B1 _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5Y25 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.1 _reflns.d_resolution_low 39.6 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10020 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 21.7 _reflns.pdbx_Rmerge_I_obs 0.080 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 54.39 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.207 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.018 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.10 _reflns_shell.d_res_low 3.15 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 7.39 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 502 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.585 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 21.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.012 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.129 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.968 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5Y25 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.102 _refine.ls_d_res_low 19.816 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9961 _refine.ls_number_reflns_R_free 992 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.94 _refine.ls_percent_reflns_R_free 9.96 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2167 _refine.ls_R_factor_R_free 0.2460 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2134 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5EDP _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2312 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2353 _refine_hist.d_res_high 3.102 _refine_hist.d_res_low 19.816 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.005 ? 2409 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.696 ? 3267 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 19.394 ? 1454 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.047 ? 366 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 407 ? f_plane_restr ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 3.102 _refine_ls_shell.d_res_low 3.2644 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 139 _refine_ls_shell.number_reflns_R_work 1284 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3551 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3175 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5Y25 _struct.title 'EGFR kinase domain mutant (T790M/L858R) with covalent ligand NS-062' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5Y25 _struct_keywords.text 'Inhibitor, complex, TRANSFERASE, TRANSFERASE-TRANSFERASE INHIBITOR complex' _struct_keywords.pdbx_keywords 'TRANSFERASE/TRANSFERASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code EGFR_HUMAN _struct_ref.pdbx_db_accession P00533 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEEDMDDVVDADEYL IPQQG ; _struct_ref.pdbx_align_begin 698 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5Y25 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 332 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00533 _struct_ref_seq.db_align_beg 698 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1022 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 698 _struct_ref_seq.pdbx_auth_seq_align_end 1022 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5Y25 MET A 1 ? UNP P00533 ? ? 'expression tag' 691 1 1 5Y25 HIS A 2 ? UNP P00533 ? ? 'expression tag' 692 2 1 5Y25 HIS A 3 ? UNP P00533 ? ? 'expression tag' 693 3 1 5Y25 HIS A 4 ? UNP P00533 ? ? 'expression tag' 694 4 1 5Y25 HIS A 5 ? UNP P00533 ? ? 'expression tag' 695 5 1 5Y25 HIS A 6 ? UNP P00533 ? ? 'expression tag' 696 6 1 5Y25 HIS A 7 ? UNP P00533 ? ? 'expression tag' 697 7 1 5Y25 MET A 100 ? UNP P00533 THR 790 'engineered mutation' 790 8 1 5Y25 ARG A 168 ? UNP P00533 LEU 858 'engineered mutation' 858 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 14730 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 62 ? ALA A 77 ? SER A 752 ALA A 767 1 ? 16 HELX_P HELX_P2 AA2 CYS A 107 ? GLU A 114 ? CYS A 797 GLU A 804 1 ? 8 HELX_P HELX_P3 AA3 HIS A 115 ? ILE A 119 ? HIS A 805 ILE A 809 5 ? 5 HELX_P HELX_P4 AA4 GLY A 120 ? ARG A 141 ? GLY A 810 ARG A 831 1 ? 22 HELX_P HELX_P5 AA5 ALA A 149 ? ARG A 151 ? ALA A 839 ARG A 841 5 ? 3 HELX_P HELX_P6 AA6 PRO A 187 ? MET A 191 ? PRO A 877 MET A 881 5 ? 5 HELX_P HELX_P7 AA7 ALA A 192 ? HIS A 198 ? ALA A 882 HIS A 888 1 ? 7 HELX_P HELX_P8 AA8 THR A 202 ? THR A 219 ? THR A 892 THR A 909 1 ? 18 HELX_P HELX_P9 AA9 GLU A 232 ? GLY A 240 ? GLU A 922 GLY A 930 1 ? 9 HELX_P HELX_P10 AB1 THR A 250 ? TRP A 261 ? THR A 940 TRP A 951 1 ? 12 HELX_P HELX_P11 AB2 LYS A 270 ? ALA A 282 ? LYS A 960 ALA A 972 1 ? 13 HELX_P HELX_P12 AB3 ARG A 283 ? TYR A 288 ? ARG A 973 TYR A 978 5 ? 6 HELX_P HELX_P13 AB4 ASP A 322 ? TYR A 326 ? ASP A 1012 TYR A 1016 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag none _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 107 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id 8LU _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C19 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 797 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 8LU _struct_conn.ptnr2_auth_seq_id 1100 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.767 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id 8LU _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id . _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 107 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id 8LU _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 1100 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 797 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom C19 _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id CYS _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id 8LU _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Covalent chemical modification' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 16 ? LEU A 17 ? ILE A 706 LEU A 707 AA1 2 LEU A 87 ? LEU A 92 ? LEU A 777 LEU A 782 AA1 3 VAL A 96 ? GLN A 101 ? VAL A 786 GLN A 791 AA1 4 ILE A 50 ? GLU A 56 ? ILE A 740 GLU A 746 AA1 5 THR A 35 ? TRP A 41 ? THR A 725 TRP A 731 AA1 6 PHE A 22 ? GLY A 29 ? PHE A 712 GLY A 719 AA2 1 VAL A 153 ? THR A 157 ? VAL A 843 THR A 847 AA2 2 HIS A 160 ? ILE A 163 ? HIS A 850 ILE A 853 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 17 ? N LEU A 707 O ILE A 90 ? O ILE A 780 AA1 2 3 N LEU A 88 ? N LEU A 778 O ILE A 99 ? O ILE A 789 AA1 3 4 O MET A 100 ? O MET A 790 N ALA A 53 ? N ALA A 743 AA1 4 5 O ILE A 50 ? O ILE A 740 N TRP A 41 ? N TRP A 731 AA1 5 6 O VAL A 36 ? O VAL A 726 N LEU A 28 ? N LEU A 718 AA2 1 2 N LEU A 154 ? N LEU A 844 O LYS A 162 ? O LYS A 852 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 8LU _struct_site.pdbx_auth_seq_id 1100 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 15 _struct_site.details 'binding site for residue 8LU A 1100' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 LEU A 28 ? LEU A 718 . ? 1_555 ? 2 AC1 15 ALA A 53 ? ALA A 743 . ? 1_555 ? 3 AC1 15 LYS A 55 ? LYS A 745 . ? 1_555 ? 4 AC1 15 LEU A 98 ? LEU A 788 . ? 1_555 ? 5 AC1 15 MET A 100 ? MET A 790 . ? 1_555 ? 6 AC1 15 GLN A 101 ? GLN A 791 . ? 1_555 ? 7 AC1 15 LEU A 102 ? LEU A 792 . ? 1_555 ? 8 AC1 15 MET A 103 ? MET A 793 . ? 1_555 ? 9 AC1 15 PRO A 104 ? PRO A 794 . ? 1_555 ? 10 AC1 15 PHE A 105 ? PHE A 795 . ? 1_555 ? 11 AC1 15 GLY A 106 ? GLY A 796 . ? 1_555 ? 12 AC1 15 CYS A 107 ? CYS A 797 . ? 1_555 ? 13 AC1 15 ASP A 110 ? ASP A 800 . ? 1_555 ? 14 AC1 15 ARG A 151 ? ARG A 841 . ? 1_555 ? 15 AC1 15 LEU A 154 ? LEU A 844 . ? 1_555 ? # _pdbx_entry_details.entry_id 5Y25 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 736 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OH _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 TYR _pdbx_validate_close_contact.auth_seq_id_2 1016 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 715 ? ? -140.93 -41.05 2 1 GLU A 734 ? ? 43.86 -134.20 3 1 HIS A 805 ? ? -143.48 19.68 4 1 ARG A 836 ? ? 68.83 -3.95 5 1 ASP A 837 ? ? -157.17 50.13 6 1 ALA A 920 ? ? -56.81 -6.08 7 1 ASP A 984 ? ? -59.36 87.15 8 1 GLU A 985 ? ? -173.43 -34.83 9 1 HIS A 988 ? ? 62.38 129.26 10 1 PRO A 992 ? ? -47.00 85.70 11 1 ASP A 994 ? ? 62.40 -56.05 12 1 SER A 995 ? ? -87.88 -105.33 13 1 ASN A 996 ? ? 56.32 -87.98 14 1 ASP A 1009 ? ? -80.63 39.70 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 691 ? A MET 1 2 1 Y 1 A HIS 692 ? A HIS 2 3 1 Y 1 A HIS 693 ? A HIS 3 4 1 Y 1 A HIS 694 ? A HIS 4 5 1 Y 1 A HIS 695 ? A HIS 5 6 1 Y 1 A HIS 696 ? A HIS 6 7 1 Y 1 A ARG 748 ? A ARG 58 8 1 Y 1 A GLU 749 ? A GLU 59 9 1 Y 1 A ALA 750 ? A ALA 60 10 1 Y 1 A LYS 860 ? A LYS 170 11 1 Y 1 A LEU 861 ? A LEU 171 12 1 Y 1 A LEU 862 ? A LEU 172 13 1 Y 1 A GLY 863 ? A GLY 173 14 1 Y 1 A ALA 864 ? A ALA 174 15 1 Y 1 A GLU 865 ? A GLU 175 16 1 Y 1 A GLU 866 ? A GLU 176 17 1 Y 1 A LYS 867 ? A LYS 177 18 1 Y 1 A GLU 868 ? A GLU 178 19 1 Y 1 A TYR 869 ? A TYR 179 20 1 Y 1 A HIS 870 ? A HIS 180 21 1 Y 1 A ALA 871 ? A ALA 181 22 1 Y 1 A GLU 872 ? A GLU 182 23 1 Y 1 A GLY 873 ? A GLY 183 24 1 Y 1 A GLY 874 ? A GLY 184 25 1 Y 1 A LYS 875 ? A LYS 185 26 1 Y 1 A TYR 998 ? A TYR 308 27 1 Y 1 A ARG 999 ? A ARG 309 28 1 Y 1 A ALA 1000 ? A ALA 310 29 1 Y 1 A LEU 1001 ? A LEU 311 30 1 Y 1 A MET 1002 ? A MET 312 31 1 Y 1 A ASP 1003 ? A ASP 313 32 1 Y 1 A GLU 1004 ? A GLU 314 33 1 Y 1 A GLU 1005 ? A GLU 315 34 1 Y 1 A ASP 1006 ? A ASP 316 35 1 Y 1 A MET 1007 ? A MET 317 36 1 Y 1 A ILE 1018 ? A ILE 328 37 1 Y 1 A PRO 1019 ? A PRO 329 38 1 Y 1 A GLN 1020 ? A GLN 330 39 1 Y 1 A GLN 1021 ? A GLN 331 40 1 Y 1 A GLY 1022 ? A GLY 332 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8LU F1 F N N 1 8LU C1 C Y N 2 8LU C2 C Y N 3 8LU C3 C Y N 4 8LU C4 C Y N 5 8LU CL1 CL N N 6 8LU C5 C Y N 7 8LU C6 C Y N 8 8LU N1 N N N 9 8LU C7 C Y N 10 8LU N2 N Y N 11 8LU C8 C Y N 12 8LU N3 N Y N 13 8LU C9 C Y N 14 8LU C10 C Y N 15 8LU C11 C Y N 16 8LU C12 C Y N 17 8LU N4 N N N 18 8LU C13 C N N 19 8LU C14 C N R 20 8LU C15 C N N 21 8LU C16 C N N 22 8LU C17 C N N 23 8LU N5 N N N 24 8LU C18 C N N 25 8LU C19 C N N 26 8LU F2 F N N 27 8LU O1 O N N 28 8LU O2 O N N 29 8LU C20 C Y N 30 8LU O3 O N N 31 8LU C21 C N N 32 8LU C22 C N N 33 8LU C23 C N N 34 8LU N6 N N N 35 8LU C24 C N N 36 8LU C25 C N N 37 8LU O4 O N N 38 8LU C26 C N N 39 8LU C27 C N N 40 8LU C28 C Y N 41 8LU H1 H N N 42 8LU H2 H N N 43 8LU H3 H N N 44 8LU H4 H N N 45 8LU H5 H N N 46 8LU H6 H N N 47 8LU H7 H N N 48 8LU H8 H N N 49 8LU H9 H N N 50 8LU H10 H N N 51 8LU H11 H N N 52 8LU H12 H N N 53 8LU H13 H N N 54 8LU H14 H N N 55 8LU H15 H N N 56 8LU H16 H N N 57 8LU H17 H N N 58 8LU H18 H N N 59 8LU H19 H N N 60 8LU H20 H N N 61 8LU H21 H N N 62 8LU H22 H N N 63 8LU H24 H N N 64 8LU H25 H N N 65 8LU H26 H N N 66 8LU H27 H N N 67 8LU H28 H N N 68 8LU H29 H N N 69 8LU H30 H N N 70 8LU H31 H N N 71 8LU H32 H N N 72 ALA N N N N 73 ALA CA C N S 74 ALA C C N N 75 ALA O O N N 76 ALA CB C N N 77 ALA OXT O N N 78 ALA H H N N 79 ALA H2 H N N 80 ALA HA H N N 81 ALA HB1 H N N 82 ALA HB2 H N N 83 ALA HB3 H N N 84 ALA HXT H N N 85 ARG N N N N 86 ARG CA C N S 87 ARG C C N N 88 ARG O O N N 89 ARG CB C N N 90 ARG CG C N N 91 ARG CD C N N 92 ARG NE N N N 93 ARG CZ C N N 94 ARG NH1 N N N 95 ARG NH2 N N N 96 ARG OXT O N N 97 ARG H H N N 98 ARG H2 H N N 99 ARG HA H N N 100 ARG HB2 H N N 101 ARG HB3 H N N 102 ARG HG2 H N N 103 ARG HG3 H N N 104 ARG HD2 H N N 105 ARG HD3 H N N 106 ARG HE H N N 107 ARG HH11 H N N 108 ARG HH12 H N N 109 ARG HH21 H N N 110 ARG HH22 H N N 111 ARG HXT H N N 112 ASN N N N N 113 ASN CA C N S 114 ASN C C N N 115 ASN O O N N 116 ASN CB C N N 117 ASN CG C N N 118 ASN OD1 O N N 119 ASN ND2 N N N 120 ASN OXT O N N 121 ASN H H N N 122 ASN H2 H N N 123 ASN HA H N N 124 ASN HB2 H N N 125 ASN HB3 H N N 126 ASN HD21 H N N 127 ASN HD22 H N N 128 ASN HXT H N N 129 ASP N N N N 130 ASP CA C N S 131 ASP C C N N 132 ASP O O N N 133 ASP CB C N N 134 ASP CG C N N 135 ASP OD1 O N N 136 ASP OD2 O N N 137 ASP OXT O N N 138 ASP H H N N 139 ASP H2 H N N 140 ASP HA H N N 141 ASP HB2 H N N 142 ASP HB3 H N N 143 ASP HD2 H N N 144 ASP HXT H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 GLN N N N N 160 GLN CA C N S 161 GLN C C N N 162 GLN O O N N 163 GLN CB C N N 164 GLN CG C N N 165 GLN CD C N N 166 GLN OE1 O N N 167 GLN NE2 N N N 168 GLN OXT O N N 169 GLN H H N N 170 GLN H2 H N N 171 GLN HA H N N 172 GLN HB2 H N N 173 GLN HB3 H N N 174 GLN HG2 H N N 175 GLN HG3 H N N 176 GLN HE21 H N N 177 GLN HE22 H N N 178 GLN HXT H N N 179 GLU N N N N 180 GLU CA C N S 181 GLU C C N N 182 GLU O O N N 183 GLU CB C N N 184 GLU CG C N N 185 GLU CD C N N 186 GLU OE1 O N N 187 GLU OE2 O N N 188 GLU OXT O N N 189 GLU H H N N 190 GLU H2 H N N 191 GLU HA H N N 192 GLU HB2 H N N 193 GLU HB3 H N N 194 GLU HG2 H N N 195 GLU HG3 H N N 196 GLU HE2 H N N 197 GLU HXT H N N 198 GLY N N N N 199 GLY CA C N N 200 GLY C C N N 201 GLY O O N N 202 GLY OXT O N N 203 GLY H H N N 204 GLY H2 H N N 205 GLY HA2 H N N 206 GLY HA3 H N N 207 GLY HXT H N N 208 HIS N N N N 209 HIS CA C N S 210 HIS C C N N 211 HIS O O N N 212 HIS CB C N N 213 HIS CG C Y N 214 HIS ND1 N Y N 215 HIS CD2 C Y N 216 HIS CE1 C Y N 217 HIS NE2 N Y N 218 HIS OXT O N N 219 HIS H H N N 220 HIS H2 H N N 221 HIS HA H N N 222 HIS HB2 H N N 223 HIS HB3 H N N 224 HIS HD1 H N N 225 HIS HD2 H N N 226 HIS HE1 H N N 227 HIS HE2 H N N 228 HIS HXT H N N 229 ILE N N N N 230 ILE CA C N S 231 ILE C C N N 232 ILE O O N N 233 ILE CB C N S 234 ILE CG1 C N N 235 ILE CG2 C N N 236 ILE CD1 C N N 237 ILE OXT O N N 238 ILE H H N N 239 ILE H2 H N N 240 ILE HA H N N 241 ILE HB H N N 242 ILE HG12 H N N 243 ILE HG13 H N N 244 ILE HG21 H N N 245 ILE HG22 H N N 246 ILE HG23 H N N 247 ILE HD11 H N N 248 ILE HD12 H N N 249 ILE HD13 H N N 250 ILE HXT H N N 251 LEU N N N N 252 LEU CA C N S 253 LEU C C N N 254 LEU O O N N 255 LEU CB C N N 256 LEU CG C N N 257 LEU CD1 C N N 258 LEU CD2 C N N 259 LEU OXT O N N 260 LEU H H N N 261 LEU H2 H N N 262 LEU HA H N N 263 LEU HB2 H N N 264 LEU HB3 H N N 265 LEU HG H N N 266 LEU HD11 H N N 267 LEU HD12 H N N 268 LEU HD13 H N N 269 LEU HD21 H N N 270 LEU HD22 H N N 271 LEU HD23 H N N 272 LEU HXT H N N 273 LYS N N N N 274 LYS CA C N S 275 LYS C C N N 276 LYS O O N N 277 LYS CB C N N 278 LYS CG C N N 279 LYS CD C N N 280 LYS CE C N N 281 LYS NZ N N N 282 LYS OXT O N N 283 LYS H H N N 284 LYS H2 H N N 285 LYS HA H N N 286 LYS HB2 H N N 287 LYS HB3 H N N 288 LYS HG2 H N N 289 LYS HG3 H N N 290 LYS HD2 H N N 291 LYS HD3 H N N 292 LYS HE2 H N N 293 LYS HE3 H N N 294 LYS HZ1 H N N 295 LYS HZ2 H N N 296 LYS HZ3 H N N 297 LYS HXT H N N 298 MET N N N N 299 MET CA C N S 300 MET C C N N 301 MET O O N N 302 MET CB C N N 303 MET CG C N N 304 MET SD S N N 305 MET CE C N N 306 MET OXT O N N 307 MET H H N N 308 MET H2 H N N 309 MET HA H N N 310 MET HB2 H N N 311 MET HB3 H N N 312 MET HG2 H N N 313 MET HG3 H N N 314 MET HE1 H N N 315 MET HE2 H N N 316 MET HE3 H N N 317 MET HXT H N N 318 PHE N N N N 319 PHE CA C N S 320 PHE C C N N 321 PHE O O N N 322 PHE CB C N N 323 PHE CG C Y N 324 PHE CD1 C Y N 325 PHE CD2 C Y N 326 PHE CE1 C Y N 327 PHE CE2 C Y N 328 PHE CZ C Y N 329 PHE OXT O N N 330 PHE H H N N 331 PHE H2 H N N 332 PHE HA H N N 333 PHE HB2 H N N 334 PHE HB3 H N N 335 PHE HD1 H N N 336 PHE HD2 H N N 337 PHE HE1 H N N 338 PHE HE2 H N N 339 PHE HZ H N N 340 PHE HXT H N N 341 PRO N N N N 342 PRO CA C N S 343 PRO C C N N 344 PRO O O N N 345 PRO CB C N N 346 PRO CG C N N 347 PRO CD C N N 348 PRO OXT O N N 349 PRO H H N N 350 PRO HA H N N 351 PRO HB2 H N N 352 PRO HB3 H N N 353 PRO HG2 H N N 354 PRO HG3 H N N 355 PRO HD2 H N N 356 PRO HD3 H N N 357 PRO HXT H N N 358 SER N N N N 359 SER CA C N S 360 SER C C N N 361 SER O O N N 362 SER CB C N N 363 SER OG O N N 364 SER OXT O N N 365 SER H H N N 366 SER H2 H N N 367 SER HA H N N 368 SER HB2 H N N 369 SER HB3 H N N 370 SER HG H N N 371 SER HXT H N N 372 THR N N N N 373 THR CA C N S 374 THR C C N N 375 THR O O N N 376 THR CB C N R 377 THR OG1 O N N 378 THR CG2 C N N 379 THR OXT O N N 380 THR H H N N 381 THR H2 H N N 382 THR HA H N N 383 THR HB H N N 384 THR HG1 H N N 385 THR HG21 H N N 386 THR HG22 H N N 387 THR HG23 H N N 388 THR HXT H N N 389 TRP N N N N 390 TRP CA C N S 391 TRP C C N N 392 TRP O O N N 393 TRP CB C N N 394 TRP CG C Y N 395 TRP CD1 C Y N 396 TRP CD2 C Y N 397 TRP NE1 N Y N 398 TRP CE2 C Y N 399 TRP CE3 C Y N 400 TRP CZ2 C Y N 401 TRP CZ3 C Y N 402 TRP CH2 C Y N 403 TRP OXT O N N 404 TRP H H N N 405 TRP H2 H N N 406 TRP HA H N N 407 TRP HB2 H N N 408 TRP HB3 H N N 409 TRP HD1 H N N 410 TRP HE1 H N N 411 TRP HE3 H N N 412 TRP HZ2 H N N 413 TRP HZ3 H N N 414 TRP HH2 H N N 415 TRP HXT H N N 416 TYR N N N N 417 TYR CA C N S 418 TYR C C N N 419 TYR O O N N 420 TYR CB C N N 421 TYR CG C Y N 422 TYR CD1 C Y N 423 TYR CD2 C Y N 424 TYR CE1 C Y N 425 TYR CE2 C Y N 426 TYR CZ C Y N 427 TYR OH O N N 428 TYR OXT O N N 429 TYR H H N N 430 TYR H2 H N N 431 TYR HA H N N 432 TYR HB2 H N N 433 TYR HB3 H N N 434 TYR HD1 H N N 435 TYR HD2 H N N 436 TYR HE1 H N N 437 TYR HE2 H N N 438 TYR HH H N N 439 TYR HXT H N N 440 VAL N N N N 441 VAL CA C N S 442 VAL C C N N 443 VAL O O N N 444 VAL CB C N N 445 VAL CG1 C N N 446 VAL CG2 C N N 447 VAL OXT O N N 448 VAL H H N N 449 VAL H2 H N N 450 VAL HA H N N 451 VAL HB H N N 452 VAL HG11 H N N 453 VAL HG12 H N N 454 VAL HG13 H N N 455 VAL HG21 H N N 456 VAL HG22 H N N 457 VAL HG23 H N N 458 VAL HXT H N N 459 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8LU F1 C1 sing N N 1 8LU C1 C2 doub Y N 2 8LU C1 C4 sing Y N 3 8LU CL1 C4 sing N N 4 8LU C2 C3 sing Y N 5 8LU C4 C5 doub Y N 6 8LU C3 C6 doub Y N 7 8LU C5 C6 sing Y N 8 8LU C6 N1 sing N N 9 8LU N1 C7 sing N N 10 8LU N2 C7 doub Y N 11 8LU N2 C8 sing Y N 12 8LU C7 C10 sing Y N 13 8LU C8 N3 doub Y N 14 8LU C10 C11 doub Y N 15 8LU C10 C9 sing Y N 16 8LU N3 C9 sing Y N 17 8LU C11 C12 sing Y N 18 8LU C9 C28 doub Y N 19 8LU C12 N4 sing N N 20 8LU C12 C20 doub Y N 21 8LU O1 C18 doub N N 22 8LU C28 C20 sing Y N 23 8LU F2 C19 sing N N 24 8LU N4 C13 sing N N 25 8LU C20 O3 sing N N 26 8LU C18 C19 sing N N 27 8LU C18 N5 sing N N 28 8LU C13 O2 doub N N 29 8LU C13 C14 sing N N 30 8LU C14 N5 sing N N 31 8LU C14 C15 sing N N 32 8LU O3 C21 sing N N 33 8LU N5 C17 sing N N 34 8LU C21 C22 sing N N 35 8LU C15 C16 sing N N 36 8LU C17 C16 sing N N 37 8LU C22 C23 sing N N 38 8LU C23 N6 sing N N 39 8LU N6 C27 sing N N 40 8LU N6 C24 sing N N 41 8LU C27 C26 sing N N 42 8LU C24 C25 sing N N 43 8LU C26 O4 sing N N 44 8LU C25 O4 sing N N 45 8LU C2 H1 sing N N 46 8LU C3 H2 sing N N 47 8LU C5 H3 sing N N 48 8LU N1 H4 sing N N 49 8LU C8 H5 sing N N 50 8LU C11 H6 sing N N 51 8LU N4 H7 sing N N 52 8LU C14 H8 sing N N 53 8LU C15 H9 sing N N 54 8LU C15 H10 sing N N 55 8LU C16 H11 sing N N 56 8LU C16 H12 sing N N 57 8LU C17 H13 sing N N 58 8LU C17 H14 sing N N 59 8LU C19 H15 sing N N 60 8LU C19 H16 sing N N 61 8LU C21 H17 sing N N 62 8LU C21 H18 sing N N 63 8LU C22 H19 sing N N 64 8LU C22 H20 sing N N 65 8LU C23 H21 sing N N 66 8LU C23 H22 sing N N 67 8LU C24 H24 sing N N 68 8LU C24 H25 sing N N 69 8LU C25 H26 sing N N 70 8LU C25 H27 sing N N 71 8LU C26 H28 sing N N 72 8LU C26 H29 sing N N 73 8LU C27 H30 sing N N 74 8LU C27 H31 sing N N 75 8LU C28 H32 sing N N 76 ALA N CA sing N N 77 ALA N H sing N N 78 ALA N H2 sing N N 79 ALA CA C sing N N 80 ALA CA CB sing N N 81 ALA CA HA sing N N 82 ALA C O doub N N 83 ALA C OXT sing N N 84 ALA CB HB1 sing N N 85 ALA CB HB2 sing N N 86 ALA CB HB3 sing N N 87 ALA OXT HXT sing N N 88 ARG N CA sing N N 89 ARG N H sing N N 90 ARG N H2 sing N N 91 ARG CA C sing N N 92 ARG CA CB sing N N 93 ARG CA HA sing N N 94 ARG C O doub N N 95 ARG C OXT sing N N 96 ARG CB CG sing N N 97 ARG CB HB2 sing N N 98 ARG CB HB3 sing N N 99 ARG CG CD sing N N 100 ARG CG HG2 sing N N 101 ARG CG HG3 sing N N 102 ARG CD NE sing N N 103 ARG CD HD2 sing N N 104 ARG CD HD3 sing N N 105 ARG NE CZ sing N N 106 ARG NE HE sing N N 107 ARG CZ NH1 sing N N 108 ARG CZ NH2 doub N N 109 ARG NH1 HH11 sing N N 110 ARG NH1 HH12 sing N N 111 ARG NH2 HH21 sing N N 112 ARG NH2 HH22 sing N N 113 ARG OXT HXT sing N N 114 ASN N CA sing N N 115 ASN N H sing N N 116 ASN N H2 sing N N 117 ASN CA C sing N N 118 ASN CA CB sing N N 119 ASN CA HA sing N N 120 ASN C O doub N N 121 ASN C OXT sing N N 122 ASN CB CG sing N N 123 ASN CB HB2 sing N N 124 ASN CB HB3 sing N N 125 ASN CG OD1 doub N N 126 ASN CG ND2 sing N N 127 ASN ND2 HD21 sing N N 128 ASN ND2 HD22 sing N N 129 ASN OXT HXT sing N N 130 ASP N CA sing N N 131 ASP N H sing N N 132 ASP N H2 sing N N 133 ASP CA C sing N N 134 ASP CA CB sing N N 135 ASP CA HA sing N N 136 ASP C O doub N N 137 ASP C OXT sing N N 138 ASP CB CG sing N N 139 ASP CB HB2 sing N N 140 ASP CB HB3 sing N N 141 ASP CG OD1 doub N N 142 ASP CG OD2 sing N N 143 ASP OD2 HD2 sing N N 144 ASP OXT HXT sing N N 145 CYS N CA sing N N 146 CYS N H sing N N 147 CYS N H2 sing N N 148 CYS CA C sing N N 149 CYS CA CB sing N N 150 CYS CA HA sing N N 151 CYS C O doub N N 152 CYS C OXT sing N N 153 CYS CB SG sing N N 154 CYS CB HB2 sing N N 155 CYS CB HB3 sing N N 156 CYS SG HG sing N N 157 CYS OXT HXT sing N N 158 GLN N CA sing N N 159 GLN N H sing N N 160 GLN N H2 sing N N 161 GLN CA C sing N N 162 GLN CA CB sing N N 163 GLN CA HA sing N N 164 GLN C O doub N N 165 GLN C OXT sing N N 166 GLN CB CG sing N N 167 GLN CB HB2 sing N N 168 GLN CB HB3 sing N N 169 GLN CG CD sing N N 170 GLN CG HG2 sing N N 171 GLN CG HG3 sing N N 172 GLN CD OE1 doub N N 173 GLN CD NE2 sing N N 174 GLN NE2 HE21 sing N N 175 GLN NE2 HE22 sing N N 176 GLN OXT HXT sing N N 177 GLU N CA sing N N 178 GLU N H sing N N 179 GLU N H2 sing N N 180 GLU CA C sing N N 181 GLU CA CB sing N N 182 GLU CA HA sing N N 183 GLU C O doub N N 184 GLU C OXT sing N N 185 GLU CB CG sing N N 186 GLU CB HB2 sing N N 187 GLU CB HB3 sing N N 188 GLU CG CD sing N N 189 GLU CG HG2 sing N N 190 GLU CG HG3 sing N N 191 GLU CD OE1 doub N N 192 GLU CD OE2 sing N N 193 GLU OE2 HE2 sing N N 194 GLU OXT HXT sing N N 195 GLY N CA sing N N 196 GLY N H sing N N 197 GLY N H2 sing N N 198 GLY CA C sing N N 199 GLY CA HA2 sing N N 200 GLY CA HA3 sing N N 201 GLY C O doub N N 202 GLY C OXT sing N N 203 GLY OXT HXT sing N N 204 HIS N CA sing N N 205 HIS N H sing N N 206 HIS N H2 sing N N 207 HIS CA C sing N N 208 HIS CA CB sing N N 209 HIS CA HA sing N N 210 HIS C O doub N N 211 HIS C OXT sing N N 212 HIS CB CG sing N N 213 HIS CB HB2 sing N N 214 HIS CB HB3 sing N N 215 HIS CG ND1 sing Y N 216 HIS CG CD2 doub Y N 217 HIS ND1 CE1 doub Y N 218 HIS ND1 HD1 sing N N 219 HIS CD2 NE2 sing Y N 220 HIS CD2 HD2 sing N N 221 HIS CE1 NE2 sing Y N 222 HIS CE1 HE1 sing N N 223 HIS NE2 HE2 sing N N 224 HIS OXT HXT sing N N 225 ILE N CA sing N N 226 ILE N H sing N N 227 ILE N H2 sing N N 228 ILE CA C sing N N 229 ILE CA CB sing N N 230 ILE CA HA sing N N 231 ILE C O doub N N 232 ILE C OXT sing N N 233 ILE CB CG1 sing N N 234 ILE CB CG2 sing N N 235 ILE CB HB sing N N 236 ILE CG1 CD1 sing N N 237 ILE CG1 HG12 sing N N 238 ILE CG1 HG13 sing N N 239 ILE CG2 HG21 sing N N 240 ILE CG2 HG22 sing N N 241 ILE CG2 HG23 sing N N 242 ILE CD1 HD11 sing N N 243 ILE CD1 HD12 sing N N 244 ILE CD1 HD13 sing N N 245 ILE OXT HXT sing N N 246 LEU N CA sing N N 247 LEU N H sing N N 248 LEU N H2 sing N N 249 LEU CA C sing N N 250 LEU CA CB sing N N 251 LEU CA HA sing N N 252 LEU C O doub N N 253 LEU C OXT sing N N 254 LEU CB CG sing N N 255 LEU CB HB2 sing N N 256 LEU CB HB3 sing N N 257 LEU CG CD1 sing N N 258 LEU CG CD2 sing N N 259 LEU CG HG sing N N 260 LEU CD1 HD11 sing N N 261 LEU CD1 HD12 sing N N 262 LEU CD1 HD13 sing N N 263 LEU CD2 HD21 sing N N 264 LEU CD2 HD22 sing N N 265 LEU CD2 HD23 sing N N 266 LEU OXT HXT sing N N 267 LYS N CA sing N N 268 LYS N H sing N N 269 LYS N H2 sing N N 270 LYS CA C sing N N 271 LYS CA CB sing N N 272 LYS CA HA sing N N 273 LYS C O doub N N 274 LYS C OXT sing N N 275 LYS CB CG sing N N 276 LYS CB HB2 sing N N 277 LYS CB HB3 sing N N 278 LYS CG CD sing N N 279 LYS CG HG2 sing N N 280 LYS CG HG3 sing N N 281 LYS CD CE sing N N 282 LYS CD HD2 sing N N 283 LYS CD HD3 sing N N 284 LYS CE NZ sing N N 285 LYS CE HE2 sing N N 286 LYS CE HE3 sing N N 287 LYS NZ HZ1 sing N N 288 LYS NZ HZ2 sing N N 289 LYS NZ HZ3 sing N N 290 LYS OXT HXT sing N N 291 MET N CA sing N N 292 MET N H sing N N 293 MET N H2 sing N N 294 MET CA C sing N N 295 MET CA CB sing N N 296 MET CA HA sing N N 297 MET C O doub N N 298 MET C OXT sing N N 299 MET CB CG sing N N 300 MET CB HB2 sing N N 301 MET CB HB3 sing N N 302 MET CG SD sing N N 303 MET CG HG2 sing N N 304 MET CG HG3 sing N N 305 MET SD CE sing N N 306 MET CE HE1 sing N N 307 MET CE HE2 sing N N 308 MET CE HE3 sing N N 309 MET OXT HXT sing N N 310 PHE N CA sing N N 311 PHE N H sing N N 312 PHE N H2 sing N N 313 PHE CA C sing N N 314 PHE CA CB sing N N 315 PHE CA HA sing N N 316 PHE C O doub N N 317 PHE C OXT sing N N 318 PHE CB CG sing N N 319 PHE CB HB2 sing N N 320 PHE CB HB3 sing N N 321 PHE CG CD1 doub Y N 322 PHE CG CD2 sing Y N 323 PHE CD1 CE1 sing Y N 324 PHE CD1 HD1 sing N N 325 PHE CD2 CE2 doub Y N 326 PHE CD2 HD2 sing N N 327 PHE CE1 CZ doub Y N 328 PHE CE1 HE1 sing N N 329 PHE CE2 CZ sing Y N 330 PHE CE2 HE2 sing N N 331 PHE CZ HZ sing N N 332 PHE OXT HXT sing N N 333 PRO N CA sing N N 334 PRO N CD sing N N 335 PRO N H sing N N 336 PRO CA C sing N N 337 PRO CA CB sing N N 338 PRO CA HA sing N N 339 PRO C O doub N N 340 PRO C OXT sing N N 341 PRO CB CG sing N N 342 PRO CB HB2 sing N N 343 PRO CB HB3 sing N N 344 PRO CG CD sing N N 345 PRO CG HG2 sing N N 346 PRO CG HG3 sing N N 347 PRO CD HD2 sing N N 348 PRO CD HD3 sing N N 349 PRO OXT HXT sing N N 350 SER N CA sing N N 351 SER N H sing N N 352 SER N H2 sing N N 353 SER CA C sing N N 354 SER CA CB sing N N 355 SER CA HA sing N N 356 SER C O doub N N 357 SER C OXT sing N N 358 SER CB OG sing N N 359 SER CB HB2 sing N N 360 SER CB HB3 sing N N 361 SER OG HG sing N N 362 SER OXT HXT sing N N 363 THR N CA sing N N 364 THR N H sing N N 365 THR N H2 sing N N 366 THR CA C sing N N 367 THR CA CB sing N N 368 THR CA HA sing N N 369 THR C O doub N N 370 THR C OXT sing N N 371 THR CB OG1 sing N N 372 THR CB CG2 sing N N 373 THR CB HB sing N N 374 THR OG1 HG1 sing N N 375 THR CG2 HG21 sing N N 376 THR CG2 HG22 sing N N 377 THR CG2 HG23 sing N N 378 THR OXT HXT sing N N 379 TRP N CA sing N N 380 TRP N H sing N N 381 TRP N H2 sing N N 382 TRP CA C sing N N 383 TRP CA CB sing N N 384 TRP CA HA sing N N 385 TRP C O doub N N 386 TRP C OXT sing N N 387 TRP CB CG sing N N 388 TRP CB HB2 sing N N 389 TRP CB HB3 sing N N 390 TRP CG CD1 doub Y N 391 TRP CG CD2 sing Y N 392 TRP CD1 NE1 sing Y N 393 TRP CD1 HD1 sing N N 394 TRP CD2 CE2 doub Y N 395 TRP CD2 CE3 sing Y N 396 TRP NE1 CE2 sing Y N 397 TRP NE1 HE1 sing N N 398 TRP CE2 CZ2 sing Y N 399 TRP CE3 CZ3 doub Y N 400 TRP CE3 HE3 sing N N 401 TRP CZ2 CH2 doub Y N 402 TRP CZ2 HZ2 sing N N 403 TRP CZ3 CH2 sing Y N 404 TRP CZ3 HZ3 sing N N 405 TRP CH2 HH2 sing N N 406 TRP OXT HXT sing N N 407 TYR N CA sing N N 408 TYR N H sing N N 409 TYR N H2 sing N N 410 TYR CA C sing N N 411 TYR CA CB sing N N 412 TYR CA HA sing N N 413 TYR C O doub N N 414 TYR C OXT sing N N 415 TYR CB CG sing N N 416 TYR CB HB2 sing N N 417 TYR CB HB3 sing N N 418 TYR CG CD1 doub Y N 419 TYR CG CD2 sing Y N 420 TYR CD1 CE1 sing Y N 421 TYR CD1 HD1 sing N N 422 TYR CD2 CE2 doub Y N 423 TYR CD2 HD2 sing N N 424 TYR CE1 CZ doub Y N 425 TYR CE1 HE1 sing N N 426 TYR CE2 CZ sing Y N 427 TYR CE2 HE2 sing N N 428 TYR CZ OH sing N N 429 TYR OH HH sing N N 430 TYR OXT HXT sing N N 431 VAL N CA sing N N 432 VAL N H sing N N 433 VAL N H2 sing N N 434 VAL CA C sing N N 435 VAL CA CB sing N N 436 VAL CA HA sing N N 437 VAL C O doub N N 438 VAL C OXT sing N N 439 VAL CB CG1 sing N N 440 VAL CB CG2 sing N N 441 VAL CB HB sing N N 442 VAL CG1 HG11 sing N N 443 VAL CG1 HG12 sing N N 444 VAL CG1 HG13 sing N N 445 VAL CG2 HG21 sing N N 446 VAL CG2 HG22 sing N N 447 VAL CG2 HG23 sing N N 448 VAL OXT HXT sing N N 449 # _pdbx_audit_support.funding_organization 'Network Joint Research Center for Materials and Devices (MEXT,Japan)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5EDP _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5Y25 _atom_sites.fract_transf_matrix[1][1] 0.006743 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006743 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006743 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL F N O S # loop_