data_5Y2E # _entry.id 5Y2E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5Y2E pdb_00005y2e 10.2210/pdb5y2e/pdb WWPDB D_1300004546 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-03-14 2 'Structure model' 1 1 2018-05-30 3 'Structure model' 1 2 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_database_2.pdbx_DOI' 5 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5Y2E _pdbx_database_status.recvd_initial_deposition_date 2017-07-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Suguna, K.' 1 ? 'Kumar, S.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Arch. Virol.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1432-8798 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 163 _citation.language ? _citation.page_first 1531 _citation.page_last 1547 _citation.title 'New tetrameric forms of the rotavirus NSP4 with antiparallel helices.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1007/s00705-018-3753-6 _citation.pdbx_database_id_PubMed 29455326 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kumar, S.' 1 ? primary 'Ramappa, R.' 2 ? primary 'Pamidimukkala, K.' 3 ? primary 'Rao, C.D.' 4 ? primary 'Suguna, K.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Non-structural glycoprotein 4' 5749.946 4 ? E120G 'UNP residues 95-140' ? 2 water nat water 18.015 8 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name NSP4,NCVP5,NS28 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MIEKQMDRVVKEMRRQLEMIDKLTTRGIEQVELLKRIHDKLMIRAVD _entity_poly.pdbx_seq_one_letter_code_can MIEKQMDRVVKEMRRQLEMIDKLTTRGIEQVELLKRIHDKLMIRAVD _entity_poly.pdbx_strand_id D,A,C,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 GLU n 1 4 LYS n 1 5 GLN n 1 6 MET n 1 7 ASP n 1 8 ARG n 1 9 VAL n 1 10 VAL n 1 11 LYS n 1 12 GLU n 1 13 MET n 1 14 ARG n 1 15 ARG n 1 16 GLN n 1 17 LEU n 1 18 GLU n 1 19 MET n 1 20 ILE n 1 21 ASP n 1 22 LYS n 1 23 LEU n 1 24 THR n 1 25 THR n 1 26 ARG n 1 27 GLY n 1 28 ILE n 1 29 GLU n 1 30 GLN n 1 31 VAL n 1 32 GLU n 1 33 LEU n 1 34 LEU n 1 35 LYS n 1 36 ARG n 1 37 ILE n 1 38 HIS n 1 39 ASP n 1 40 LYS n 1 41 LEU n 1 42 MET n 1 43 ILE n 1 44 ARG n 1 45 ALA n 1 46 VAL n 1 47 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 47 _entity_src_gen.gene_src_common_name RV-A _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'RVA/Cow/United States/NCDV-Lincoln/1969/G6P6[1]' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rotavirus A (strain RVA/Cow/United States/NCDV-Lincoln/1969/G6P6[1])' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 36439 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 94 94 MET MET D . n A 1 2 ILE 2 95 95 ILE ILE D . n A 1 3 GLU 3 96 96 GLU GLU D . n A 1 4 LYS 4 97 97 LYS LYS D . n A 1 5 GLN 5 98 98 GLN GLN D . n A 1 6 MET 6 99 99 MET MET D . n A 1 7 ASP 7 100 100 ASP ASP D . n A 1 8 ARG 8 101 101 ARG ARG D . n A 1 9 VAL 9 102 102 VAL VAL D . n A 1 10 VAL 10 103 103 VAL VAL D . n A 1 11 LYS 11 104 104 LYS LYS D . n A 1 12 GLU 12 105 105 GLU GLU D . n A 1 13 MET 13 106 106 MET MET D . n A 1 14 ARG 14 107 107 ARG ARG D . n A 1 15 ARG 15 108 108 ARG ARG D . n A 1 16 GLN 16 109 109 GLN GLN D . n A 1 17 LEU 17 110 110 LEU LEU D . n A 1 18 GLU 18 111 111 GLU GLU D . n A 1 19 MET 19 112 112 MET MET D . n A 1 20 ILE 20 113 113 ILE ILE D . n A 1 21 ASP 21 114 114 ASP ASP D . n A 1 22 LYS 22 115 115 LYS LYS D . n A 1 23 LEU 23 116 116 LEU LEU D . n A 1 24 THR 24 117 117 THR THR D . n A 1 25 THR 25 118 118 THR THR D . n A 1 26 ARG 26 119 119 ARG ARG D . n A 1 27 GLY 27 120 120 GLY GLY D . n A 1 28 ILE 28 121 121 ILE ILE D . n A 1 29 GLU 29 122 122 GLU GLU D . n A 1 30 GLN 30 123 123 GLN GLN D . n A 1 31 VAL 31 124 124 VAL VAL D . n A 1 32 GLU 32 125 125 GLU GLU D . n A 1 33 LEU 33 126 126 LEU LEU D . n A 1 34 LEU 34 127 127 LEU LEU D . n A 1 35 LYS 35 128 128 LYS LYS D . n A 1 36 ARG 36 129 129 ARG ARG D . n A 1 37 ILE 37 130 130 ILE ILE D . n A 1 38 HIS 38 131 131 HIS HIS D . n A 1 39 ASP 39 132 132 ASP ASP D . n A 1 40 LYS 40 133 133 LYS LYS D . n A 1 41 LEU 41 134 134 LEU LEU D . n A 1 42 MET 42 135 135 MET MET D . n A 1 43 ILE 43 136 136 ILE ILE D . n A 1 44 ARG 44 137 137 ARG ARG D . n A 1 45 ALA 45 138 138 ALA ALA D . n A 1 46 VAL 46 139 139 VAL VAL D . n A 1 47 ASP 47 140 ? ? ? D . n B 1 1 MET 1 94 94 MET MET A . n B 1 2 ILE 2 95 95 ILE ILE A . n B 1 3 GLU 3 96 96 GLU GLU A . n B 1 4 LYS 4 97 97 LYS LYS A . n B 1 5 GLN 5 98 98 GLN GLN A . n B 1 6 MET 6 99 99 MET MET A . n B 1 7 ASP 7 100 100 ASP ASP A . n B 1 8 ARG 8 101 101 ARG ARG A . n B 1 9 VAL 9 102 102 VAL VAL A . n B 1 10 VAL 10 103 103 VAL VAL A . n B 1 11 LYS 11 104 104 LYS LYS A . n B 1 12 GLU 12 105 105 GLU GLU A . n B 1 13 MET 13 106 106 MET MET A . n B 1 14 ARG 14 107 107 ARG ARG A . n B 1 15 ARG 15 108 108 ARG ARG A . n B 1 16 GLN 16 109 109 GLN GLN A . n B 1 17 LEU 17 110 110 LEU LEU A . n B 1 18 GLU 18 111 111 GLU GLU A . n B 1 19 MET 19 112 112 MET MET A . n B 1 20 ILE 20 113 113 ILE ILE A . n B 1 21 ASP 21 114 114 ASP ASP A . n B 1 22 LYS 22 115 115 LYS LYS A . n B 1 23 LEU 23 116 116 LEU LEU A . n B 1 24 THR 24 117 117 THR THR A . n B 1 25 THR 25 118 118 THR THR A . n B 1 26 ARG 26 119 119 ARG ARG A . n B 1 27 GLY 27 120 120 GLY GLY A . n B 1 28 ILE 28 121 121 ILE ILE A . n B 1 29 GLU 29 122 122 GLU GLU A . n B 1 30 GLN 30 123 123 GLN GLN A . n B 1 31 VAL 31 124 124 VAL VAL A . n B 1 32 GLU 32 125 125 GLU GLU A . n B 1 33 LEU 33 126 126 LEU LEU A . n B 1 34 LEU 34 127 127 LEU LEU A . n B 1 35 LYS 35 128 128 LYS LYS A . n B 1 36 ARG 36 129 129 ARG ARG A . n B 1 37 ILE 37 130 130 ILE ILE A . n B 1 38 HIS 38 131 131 HIS HIS A . n B 1 39 ASP 39 132 132 ASP ASP A . n B 1 40 LYS 40 133 133 LYS LYS A . n B 1 41 LEU 41 134 134 LEU LEU A . n B 1 42 MET 42 135 135 MET MET A . n B 1 43 ILE 43 136 136 ILE ILE A . n B 1 44 ARG 44 137 137 ARG ARG A . n B 1 45 ALA 45 138 138 ALA ALA A . n B 1 46 VAL 46 139 ? ? ? A . n B 1 47 ASP 47 140 ? ? ? A . n C 1 1 MET 1 94 94 MET MET C . n C 1 2 ILE 2 95 95 ILE ILE C . n C 1 3 GLU 3 96 96 GLU GLU C . n C 1 4 LYS 4 97 97 LYS LYS C . n C 1 5 GLN 5 98 98 GLN GLN C . n C 1 6 MET 6 99 99 MET MET C . n C 1 7 ASP 7 100 100 ASP ASP C . n C 1 8 ARG 8 101 101 ARG ARG C . n C 1 9 VAL 9 102 102 VAL VAL C . n C 1 10 VAL 10 103 103 VAL VAL C . n C 1 11 LYS 11 104 104 LYS LYS C . n C 1 12 GLU 12 105 105 GLU GLU C . n C 1 13 MET 13 106 106 MET MET C . n C 1 14 ARG 14 107 107 ARG ARG C . n C 1 15 ARG 15 108 108 ARG ARG C . n C 1 16 GLN 16 109 109 GLN GLN C . n C 1 17 LEU 17 110 110 LEU LEU C . n C 1 18 GLU 18 111 111 GLU GLU C . n C 1 19 MET 19 112 112 MET MET C . n C 1 20 ILE 20 113 113 ILE ILE C . n C 1 21 ASP 21 114 114 ASP ASP C . n C 1 22 LYS 22 115 115 LYS LYS C . n C 1 23 LEU 23 116 116 LEU LEU C . n C 1 24 THR 24 117 117 THR THR C . n C 1 25 THR 25 118 118 THR THR C . n C 1 26 ARG 26 119 119 ARG ARG C . n C 1 27 GLY 27 120 120 GLY GLY C . n C 1 28 ILE 28 121 121 ILE ILE C . n C 1 29 GLU 29 122 122 GLU GLU C . n C 1 30 GLN 30 123 123 GLN GLN C . n C 1 31 VAL 31 124 124 VAL VAL C . n C 1 32 GLU 32 125 125 GLU GLU C . n C 1 33 LEU 33 126 126 LEU LEU C . n C 1 34 LEU 34 127 127 LEU LEU C . n C 1 35 LYS 35 128 128 LYS LYS C . n C 1 36 ARG 36 129 129 ARG ARG C . n C 1 37 ILE 37 130 130 ILE ILE C . n C 1 38 HIS 38 131 131 HIS HIS C . n C 1 39 ASP 39 132 132 ASP ASP C . n C 1 40 LYS 40 133 133 LYS LYS C . n C 1 41 LEU 41 134 134 LEU LEU C . n C 1 42 MET 42 135 135 MET MET C . n C 1 43 ILE 43 136 136 ILE ILE C . n C 1 44 ARG 44 137 137 ARG ARG C . n C 1 45 ALA 45 138 138 ALA ALA C . n C 1 46 VAL 46 139 139 VAL VAL C . n C 1 47 ASP 47 140 140 ASP ASP C . n D 1 1 MET 1 94 94 MET MET B . n D 1 2 ILE 2 95 95 ILE ILE B . n D 1 3 GLU 3 96 96 GLU GLU B . n D 1 4 LYS 4 97 97 LYS LYS B . n D 1 5 GLN 5 98 98 GLN GLN B . n D 1 6 MET 6 99 99 MET MET B . n D 1 7 ASP 7 100 100 ASP ASP B . n D 1 8 ARG 8 101 101 ARG ARG B . n D 1 9 VAL 9 102 102 VAL VAL B . n D 1 10 VAL 10 103 103 VAL VAL B . n D 1 11 LYS 11 104 104 LYS LYS B . n D 1 12 GLU 12 105 105 GLU GLU B . n D 1 13 MET 13 106 106 MET MET B . n D 1 14 ARG 14 107 107 ARG ARG B . n D 1 15 ARG 15 108 108 ARG ARG B . n D 1 16 GLN 16 109 109 GLN GLN B . n D 1 17 LEU 17 110 110 LEU LEU B . n D 1 18 GLU 18 111 111 GLU GLU B . n D 1 19 MET 19 112 112 MET MET B . n D 1 20 ILE 20 113 113 ILE ILE B . n D 1 21 ASP 21 114 114 ASP ASP B . n D 1 22 LYS 22 115 115 LYS LYS B . n D 1 23 LEU 23 116 116 LEU LEU B . n D 1 24 THR 24 117 117 THR THR B . n D 1 25 THR 25 118 118 THR THR B . n D 1 26 ARG 26 119 119 ARG ARG B . n D 1 27 GLY 27 120 120 GLY GLY B . n D 1 28 ILE 28 121 121 ILE ILE B . n D 1 29 GLU 29 122 122 GLU GLU B . n D 1 30 GLN 30 123 123 GLN GLN B . n D 1 31 VAL 31 124 124 VAL VAL B . n D 1 32 GLU 32 125 125 GLU GLU B . n D 1 33 LEU 33 126 126 LEU LEU B . n D 1 34 LEU 34 127 127 LEU LEU B . n D 1 35 LYS 35 128 128 LYS LYS B . n D 1 36 ARG 36 129 129 ARG ARG B . n D 1 37 ILE 37 130 130 ILE ILE B . n D 1 38 HIS 38 131 131 HIS HIS B . n D 1 39 ASP 39 132 132 ASP ASP B . n D 1 40 LYS 40 133 133 LYS LYS B . n D 1 41 LEU 41 134 134 LEU LEU B . n D 1 42 MET 42 135 135 MET MET B . n D 1 43 ILE 43 136 136 ILE ILE B . n D 1 44 ARG 44 137 137 ARG ARG B . n D 1 45 ALA 45 138 ? ? ? B . n D 1 46 VAL 46 139 ? ? ? B . n D 1 47 ASP 47 140 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HOH 1 201 6 HOH HOH A . E 2 HOH 2 202 8 HOH HOH A . E 2 HOH 3 203 1 HOH HOH A . F 2 HOH 1 201 9 HOH HOH C . F 2 HOH 2 202 5 HOH HOH C . F 2 HOH 3 203 10 HOH HOH C . G 2 HOH 1 201 4 HOH HOH B . G 2 HOH 2 202 11 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 D MET 94 ? CG ? A MET 1 CG 2 1 Y 1 D MET 94 ? SD ? A MET 1 SD 3 1 Y 1 D MET 94 ? CE ? A MET 1 CE 4 1 Y 1 D GLU 96 ? CG ? A GLU 3 CG 5 1 Y 1 D GLU 96 ? CD ? A GLU 3 CD 6 1 Y 1 D GLU 96 ? OE1 ? A GLU 3 OE1 7 1 Y 1 D GLU 96 ? OE2 ? A GLU 3 OE2 8 1 Y 1 D LYS 97 ? CG ? A LYS 4 CG 9 1 Y 1 D LYS 97 ? CD ? A LYS 4 CD 10 1 Y 1 D LYS 97 ? CE ? A LYS 4 CE 11 1 Y 1 D LYS 97 ? NZ ? A LYS 4 NZ 12 1 Y 1 D ARG 101 ? CD ? A ARG 8 CD 13 1 Y 1 D ARG 101 ? NE ? A ARG 8 NE 14 1 Y 1 D ARG 101 ? CZ ? A ARG 8 CZ 15 1 Y 1 D ARG 101 ? NH1 ? A ARG 8 NH1 16 1 Y 1 D ARG 101 ? NH2 ? A ARG 8 NH2 17 1 Y 1 D LYS 104 ? CG ? A LYS 11 CG 18 1 Y 1 D LYS 104 ? CD ? A LYS 11 CD 19 1 Y 1 D LYS 104 ? CE ? A LYS 11 CE 20 1 Y 1 D LYS 104 ? NZ ? A LYS 11 NZ 21 1 Y 1 D ARG 107 ? CD ? A ARG 14 CD 22 1 Y 1 D ARG 107 ? NE ? A ARG 14 NE 23 1 Y 1 D ARG 107 ? CZ ? A ARG 14 CZ 24 1 Y 1 D ARG 107 ? NH1 ? A ARG 14 NH1 25 1 Y 1 D ARG 107 ? NH2 ? A ARG 14 NH2 26 1 Y 1 D LYS 115 ? CE ? A LYS 22 CE 27 1 Y 1 D LYS 115 ? NZ ? A LYS 22 NZ 28 1 Y 1 D ARG 119 ? CZ ? A ARG 26 CZ 29 1 Y 1 D ARG 119 ? NH1 ? A ARG 26 NH1 30 1 Y 1 D ARG 119 ? NH2 ? A ARG 26 NH2 31 1 Y 1 D LYS 128 ? CD ? A LYS 35 CD 32 1 Y 1 D LYS 128 ? CE ? A LYS 35 CE 33 1 Y 1 D LYS 128 ? NZ ? A LYS 35 NZ 34 1 Y 1 D ARG 129 ? CG ? A ARG 36 CG 35 1 Y 1 D ARG 129 ? CD ? A ARG 36 CD 36 1 Y 1 D ARG 129 ? NE ? A ARG 36 NE 37 1 Y 1 D ARG 129 ? CZ ? A ARG 36 CZ 38 1 Y 1 D ARG 129 ? NH1 ? A ARG 36 NH1 39 1 Y 1 D ARG 129 ? NH2 ? A ARG 36 NH2 40 1 Y 1 D LYS 133 ? CE ? A LYS 40 CE 41 1 Y 1 D LYS 133 ? NZ ? A LYS 40 NZ 42 1 Y 1 D ARG 137 ? CG ? A ARG 44 CG 43 1 Y 1 D ARG 137 ? CD ? A ARG 44 CD 44 1 Y 1 D ARG 137 ? NE ? A ARG 44 NE 45 1 Y 1 D ARG 137 ? CZ ? A ARG 44 CZ 46 1 Y 1 D ARG 137 ? NH1 ? A ARG 44 NH1 47 1 Y 1 D ARG 137 ? NH2 ? A ARG 44 NH2 48 1 Y 1 A LYS 97 ? CG ? B LYS 4 CG 49 1 Y 1 A LYS 97 ? CD ? B LYS 4 CD 50 1 Y 1 A LYS 97 ? CE ? B LYS 4 CE 51 1 Y 1 A LYS 97 ? NZ ? B LYS 4 NZ 52 1 Y 1 A GLN 98 ? CG ? B GLN 5 CG 53 1 Y 1 A GLN 98 ? CD ? B GLN 5 CD 54 1 Y 1 A GLN 98 ? OE1 ? B GLN 5 OE1 55 1 Y 1 A GLN 98 ? NE2 ? B GLN 5 NE2 56 1 Y 1 A ARG 101 ? CD ? B ARG 8 CD 57 1 Y 1 A ARG 101 ? NE ? B ARG 8 NE 58 1 Y 1 A ARG 101 ? CZ ? B ARG 8 CZ 59 1 Y 1 A ARG 101 ? NH1 ? B ARG 8 NH1 60 1 Y 1 A ARG 101 ? NH2 ? B ARG 8 NH2 61 1 Y 1 A ARG 108 ? CZ ? B ARG 15 CZ 62 1 Y 1 A ARG 108 ? NH1 ? B ARG 15 NH1 63 1 Y 1 A ARG 108 ? NH2 ? B ARG 15 NH2 64 1 Y 1 A LYS 115 ? CD ? B LYS 22 CD 65 1 Y 1 A LYS 115 ? CE ? B LYS 22 CE 66 1 Y 1 A LYS 115 ? NZ ? B LYS 22 NZ 67 1 Y 1 A LYS 128 ? CD ? B LYS 35 CD 68 1 Y 1 A LYS 128 ? CE ? B LYS 35 CE 69 1 Y 1 A LYS 128 ? NZ ? B LYS 35 NZ 70 1 Y 1 A ARG 129 ? NE ? B ARG 36 NE 71 1 Y 1 A ARG 129 ? CZ ? B ARG 36 CZ 72 1 Y 1 A ARG 129 ? NH1 ? B ARG 36 NH1 73 1 Y 1 A ARG 129 ? NH2 ? B ARG 36 NH2 74 1 Y 1 A LYS 133 ? CE ? B LYS 40 CE 75 1 Y 1 A LYS 133 ? NZ ? B LYS 40 NZ 76 1 Y 1 C LYS 97 ? CG ? C LYS 4 CG 77 1 Y 1 C LYS 97 ? CD ? C LYS 4 CD 78 1 Y 1 C LYS 97 ? CE ? C LYS 4 CE 79 1 Y 1 C LYS 97 ? NZ ? C LYS 4 NZ 80 1 Y 1 C ARG 101 ? CG ? C ARG 8 CG 81 1 Y 1 C ARG 101 ? CD ? C ARG 8 CD 82 1 Y 1 C ARG 101 ? NE ? C ARG 8 NE 83 1 Y 1 C ARG 101 ? CZ ? C ARG 8 CZ 84 1 Y 1 C ARG 101 ? NH1 ? C ARG 8 NH1 85 1 Y 1 C ARG 101 ? NH2 ? C ARG 8 NH2 86 1 Y 1 C ARG 107 ? CZ ? C ARG 14 CZ 87 1 Y 1 C ARG 107 ? NH1 ? C ARG 14 NH1 88 1 Y 1 C ARG 107 ? NH2 ? C ARG 14 NH2 89 1 Y 1 C LYS 115 ? CD ? C LYS 22 CD 90 1 Y 1 C LYS 115 ? CE ? C LYS 22 CE 91 1 Y 1 C LYS 115 ? NZ ? C LYS 22 NZ 92 1 Y 1 C ARG 119 ? NE ? C ARG 26 NE 93 1 Y 1 C ARG 119 ? CZ ? C ARG 26 CZ 94 1 Y 1 C ARG 119 ? NH1 ? C ARG 26 NH1 95 1 Y 1 C ARG 119 ? NH2 ? C ARG 26 NH2 96 1 Y 1 C ARG 129 ? NE ? C ARG 36 NE 97 1 Y 1 C ARG 129 ? CZ ? C ARG 36 CZ 98 1 Y 1 C ARG 129 ? NH1 ? C ARG 36 NH1 99 1 Y 1 C ARG 129 ? NH2 ? C ARG 36 NH2 100 1 Y 1 C LYS 133 ? CG ? C LYS 40 CG 101 1 Y 1 C LYS 133 ? CD ? C LYS 40 CD 102 1 Y 1 C LYS 133 ? CE ? C LYS 40 CE 103 1 Y 1 C LYS 133 ? NZ ? C LYS 40 NZ 104 1 Y 1 C ARG 137 ? CG ? C ARG 44 CG 105 1 Y 1 C ARG 137 ? CD ? C ARG 44 CD 106 1 Y 1 C ARG 137 ? NE ? C ARG 44 NE 107 1 Y 1 C ARG 137 ? CZ ? C ARG 44 CZ 108 1 Y 1 C ARG 137 ? NH1 ? C ARG 44 NH1 109 1 Y 1 C ARG 137 ? NH2 ? C ARG 44 NH2 110 1 Y 1 C ASP 140 ? CG ? C ASP 47 CG 111 1 Y 1 C ASP 140 ? OD1 ? C ASP 47 OD1 112 1 Y 1 C ASP 140 ? OD2 ? C ASP 47 OD2 113 1 Y 1 B LYS 97 ? CG ? D LYS 4 CG 114 1 Y 1 B LYS 97 ? CD ? D LYS 4 CD 115 1 Y 1 B LYS 97 ? CE ? D LYS 4 CE 116 1 Y 1 B LYS 97 ? NZ ? D LYS 4 NZ 117 1 Y 1 B GLN 98 ? CD ? D GLN 5 CD 118 1 Y 1 B GLN 98 ? OE1 ? D GLN 5 OE1 119 1 Y 1 B GLN 98 ? NE2 ? D GLN 5 NE2 120 1 Y 1 B ARG 101 ? CG ? D ARG 8 CG 121 1 Y 1 B ARG 101 ? CD ? D ARG 8 CD 122 1 Y 1 B ARG 101 ? NE ? D ARG 8 NE 123 1 Y 1 B ARG 101 ? CZ ? D ARG 8 CZ 124 1 Y 1 B ARG 101 ? NH1 ? D ARG 8 NH1 125 1 Y 1 B ARG 101 ? NH2 ? D ARG 8 NH2 126 1 Y 1 B LYS 104 ? CD ? D LYS 11 CD 127 1 Y 1 B LYS 104 ? CE ? D LYS 11 CE 128 1 Y 1 B LYS 104 ? NZ ? D LYS 11 NZ 129 1 Y 1 B ARG 108 ? CG ? D ARG 15 CG 130 1 Y 1 B ARG 108 ? CD ? D ARG 15 CD 131 1 Y 1 B ARG 108 ? NE ? D ARG 15 NE 132 1 Y 1 B ARG 108 ? CZ ? D ARG 15 CZ 133 1 Y 1 B ARG 108 ? NH1 ? D ARG 15 NH1 134 1 Y 1 B ARG 108 ? NH2 ? D ARG 15 NH2 135 1 Y 1 B LYS 115 ? CD ? D LYS 22 CD 136 1 Y 1 B LYS 115 ? CE ? D LYS 22 CE 137 1 Y 1 B LYS 115 ? NZ ? D LYS 22 NZ 138 1 Y 1 B LYS 128 ? CG ? D LYS 35 CG 139 1 Y 1 B LYS 128 ? CD ? D LYS 35 CD 140 1 Y 1 B LYS 128 ? CE ? D LYS 35 CE 141 1 Y 1 B LYS 128 ? NZ ? D LYS 35 NZ 142 1 Y 1 B ARG 129 ? CD ? D ARG 36 CD 143 1 Y 1 B ARG 129 ? NE ? D ARG 36 NE 144 1 Y 1 B ARG 129 ? CZ ? D ARG 36 CZ 145 1 Y 1 B ARG 129 ? NH1 ? D ARG 36 NH1 146 1 Y 1 B ARG 129 ? NH2 ? D ARG 36 NH2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.10 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5Y2E _cell.details ? _cell.formula_units_Z ? _cell.length_a 43.350 _cell.length_a_esd ? _cell.length_b 48.140 _cell.length_b_esd ? _cell.length_c 122.610 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y2E _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5Y2E _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.8 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 56.5 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method MICROBATCH _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M tri-Sodium citrate dehydrate, 0.5M ammonium sulfate, 1.0M lithium sulfate monohydrate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2008-08-27 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5Y2E _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.7 _reflns.d_resolution_low 61.38 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7012 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 4.3500 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.8900 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -5.2400 _refine.B_iso_max 159.410 _refine.B_iso_mean 65.6870 _refine.B_iso_min 37.400 _refine.correlation_coeff_Fo_to_Fc 0.9450 _refine.correlation_coeff_Fo_to_Fc_free 0.9270 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5Y2E _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.7000 _refine.ls_d_res_low 61.3800 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6980 _refine.ls_number_reflns_R_free 336 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.1800 _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2389 _refine.ls_R_factor_R_free 0.2735 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2372 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.7770 _refine.pdbx_overall_ESU_R_Free 0.3530 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1395 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 8 _refine_hist.number_atoms_total 1403 _refine_hist.d_res_high 2.7000 _refine_hist.d_res_low 61.3800 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.018 0.019 1395 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.000 0.020 1397 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.728 1.998 1866 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 3.633 3.000 3209 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 3.916 5.000 178 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.500 26.226 53 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 21.787 15.000 305 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 21.372 15.000 8 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.093 0.200 240 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 1474 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 218 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 4.042 5.434 724 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 4.039 5.432 723 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 6.203 8.116 898 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.7000 _refine_ls_shell.d_res_low 2.7700 _refine_ls_shell.number_reflns_all 502 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 23 _refine_ls_shell.number_reflns_R_work 479 _refine_ls_shell.percent_reflns_obs 95.9800 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.4330 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3400 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5Y2E _struct.title 'Crystal structure of the oligomerization domain of NSP4 from the rotavirus strain NCDV' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5Y2E _struct_keywords.text 'Antiparallel tetramer NSP4 Rotavirus Coiled-coil, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NSP4_ROTBN _struct_ref.pdbx_db_accession P08434 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code IEKQMDRVVKEMRRQLEMIDKLTTREIEQVELLKRIHDKLMIRAVD _struct_ref.pdbx_align_begin 95 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5Y2E D 2 ? 47 ? P08434 95 ? 140 ? 95 140 2 1 5Y2E A 2 ? 47 ? P08434 95 ? 140 ? 95 140 3 1 5Y2E C 2 ? 47 ? P08434 95 ? 140 ? 95 140 4 1 5Y2E B 2 ? 47 ? P08434 95 ? 140 ? 95 140 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5Y2E MET D 1 ? UNP P08434 ? ? 'expression tag' 94 1 1 5Y2E GLY D 27 ? UNP P08434 GLU 120 'engineered mutation' 120 2 2 5Y2E MET A 1 ? UNP P08434 ? ? 'expression tag' 94 3 2 5Y2E GLY A 27 ? UNP P08434 GLU 120 'engineered mutation' 120 4 3 5Y2E MET C 1 ? UNP P08434 ? ? 'expression tag' 94 5 3 5Y2E GLY C 27 ? UNP P08434 GLU 120 'engineered mutation' 120 6 4 5Y2E MET B 1 ? UNP P08434 ? ? 'expression tag' 94 7 4 5Y2E GLY B 27 ? UNP P08434 GLU 120 'engineered mutation' 120 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8420 ? 1 MORE -103 ? 1 'SSA (A^2)' 9510 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 MET A 1 ? VAL A 46 ? MET D 94 VAL D 139 1 ? 46 HELX_P HELX_P2 AA2 ILE B 2 ? ALA B 45 ? ILE A 95 ALA A 138 1 ? 44 HELX_P HELX_P3 AA3 ILE C 2 ? ALA C 45 ? ILE C 95 ALA C 138 1 ? 44 HELX_P HELX_P4 AA4 ILE D 2 ? ARG D 44 ? ILE B 95 ARG B 137 1 ? 43 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 ILE _pdbx_validate_close_contact.auth_seq_id_1 95 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 GLN _pdbx_validate_close_contact.auth_seq_id_2 98 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.04 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLU _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 96 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -34.98 _pdbx_validate_torsion.psi -36.40 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 0.7530 8.8690 -19.4070 0.0136 0.0209 0.0293 -0.0002 0.0074 -0.0154 0.5120 1.8222 12.5552 -0.1269 0.8400 -3.8385 -0.0063 0.0191 -0.0127 0.0147 -0.0082 -0.0403 -0.1338 0.3262 0.2319 'X-RAY DIFFRACTION' 2 ? refined -5.1420 2.5090 -13.4800 0.0390 0.0153 0.0185 -0.0122 -0.0013 -0.0012 0.5489 0.6306 12.9446 -0.0061 -1.1521 -0.6669 0.0013 -0.0231 0.0217 -0.0383 -0.0810 0.0229 -0.0658 0.5187 0.0354 'X-RAY DIFFRACTION' 3 ? refined -9.7580 8.7650 -17.8300 0.0122 0.0637 0.0132 -0.0177 0.0045 0.0050 0.4514 0.4861 11.1863 -0.0403 0.8357 0.2860 -0.0364 0.0268 0.0096 -0.0341 -0.0132 0.0144 -0.0151 -0.0356 -0.2394 'X-RAY DIFFRACTION' 4 ? refined -3.0820 13.4460 -11.8860 0.0187 0.0281 0.0688 -0.0015 0.0200 -0.0087 2.0511 1.1039 17.6475 -0.6017 4.9774 -3.1264 -0.1381 -0.0719 0.2101 -0.0117 0.0725 -0.1228 0.0048 -0.3395 -0.0406 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 D 94 D 139 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 94 A 138 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 94 C 140 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 B 94 B 137 ? ? ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D ASP 140 ? A ASP 47 2 1 Y 1 A VAL 139 ? B VAL 46 3 1 Y 1 A ASP 140 ? B ASP 47 4 1 Y 1 B ALA 138 ? D ALA 45 5 1 Y 1 B VAL 139 ? D VAL 46 6 1 Y 1 B ASP 140 ? D ASP 47 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 GLN N N N N 57 GLN CA C N S 58 GLN C C N N 59 GLN O O N N 60 GLN CB C N N 61 GLN CG C N N 62 GLN CD C N N 63 GLN OE1 O N N 64 GLN NE2 N N N 65 GLN OXT O N N 66 GLN H H N N 67 GLN H2 H N N 68 GLN HA H N N 69 GLN HB2 H N N 70 GLN HB3 H N N 71 GLN HG2 H N N 72 GLN HG3 H N N 73 GLN HE21 H N N 74 GLN HE22 H N N 75 GLN HXT H N N 76 GLU N N N N 77 GLU CA C N S 78 GLU C C N N 79 GLU O O N N 80 GLU CB C N N 81 GLU CG C N N 82 GLU CD C N N 83 GLU OE1 O N N 84 GLU OE2 O N N 85 GLU OXT O N N 86 GLU H H N N 87 GLU H2 H N N 88 GLU HA H N N 89 GLU HB2 H N N 90 GLU HB3 H N N 91 GLU HG2 H N N 92 GLU HG3 H N N 93 GLU HE2 H N N 94 GLU HXT H N N 95 GLY N N N N 96 GLY CA C N N 97 GLY C C N N 98 GLY O O N N 99 GLY OXT O N N 100 GLY H H N N 101 GLY H2 H N N 102 GLY HA2 H N N 103 GLY HA3 H N N 104 GLY HXT H N N 105 HIS N N N N 106 HIS CA C N S 107 HIS C C N N 108 HIS O O N N 109 HIS CB C N N 110 HIS CG C Y N 111 HIS ND1 N Y N 112 HIS CD2 C Y N 113 HIS CE1 C Y N 114 HIS NE2 N Y N 115 HIS OXT O N N 116 HIS H H N N 117 HIS H2 H N N 118 HIS HA H N N 119 HIS HB2 H N N 120 HIS HB3 H N N 121 HIS HD1 H N N 122 HIS HD2 H N N 123 HIS HE1 H N N 124 HIS HE2 H N N 125 HIS HXT H N N 126 HOH O O N N 127 HOH H1 H N N 128 HOH H2 H N N 129 ILE N N N N 130 ILE CA C N S 131 ILE C C N N 132 ILE O O N N 133 ILE CB C N S 134 ILE CG1 C N N 135 ILE CG2 C N N 136 ILE CD1 C N N 137 ILE OXT O N N 138 ILE H H N N 139 ILE H2 H N N 140 ILE HA H N N 141 ILE HB H N N 142 ILE HG12 H N N 143 ILE HG13 H N N 144 ILE HG21 H N N 145 ILE HG22 H N N 146 ILE HG23 H N N 147 ILE HD11 H N N 148 ILE HD12 H N N 149 ILE HD13 H N N 150 ILE HXT H N N 151 LEU N N N N 152 LEU CA C N S 153 LEU C C N N 154 LEU O O N N 155 LEU CB C N N 156 LEU CG C N N 157 LEU CD1 C N N 158 LEU CD2 C N N 159 LEU OXT O N N 160 LEU H H N N 161 LEU H2 H N N 162 LEU HA H N N 163 LEU HB2 H N N 164 LEU HB3 H N N 165 LEU HG H N N 166 LEU HD11 H N N 167 LEU HD12 H N N 168 LEU HD13 H N N 169 LEU HD21 H N N 170 LEU HD22 H N N 171 LEU HD23 H N N 172 LEU HXT H N N 173 LYS N N N N 174 LYS CA C N S 175 LYS C C N N 176 LYS O O N N 177 LYS CB C N N 178 LYS CG C N N 179 LYS CD C N N 180 LYS CE C N N 181 LYS NZ N N N 182 LYS OXT O N N 183 LYS H H N N 184 LYS H2 H N N 185 LYS HA H N N 186 LYS HB2 H N N 187 LYS HB3 H N N 188 LYS HG2 H N N 189 LYS HG3 H N N 190 LYS HD2 H N N 191 LYS HD3 H N N 192 LYS HE2 H N N 193 LYS HE3 H N N 194 LYS HZ1 H N N 195 LYS HZ2 H N N 196 LYS HZ3 H N N 197 LYS HXT H N N 198 MET N N N N 199 MET CA C N S 200 MET C C N N 201 MET O O N N 202 MET CB C N N 203 MET CG C N N 204 MET SD S N N 205 MET CE C N N 206 MET OXT O N N 207 MET H H N N 208 MET H2 H N N 209 MET HA H N N 210 MET HB2 H N N 211 MET HB3 H N N 212 MET HG2 H N N 213 MET HG3 H N N 214 MET HE1 H N N 215 MET HE2 H N N 216 MET HE3 H N N 217 MET HXT H N N 218 THR N N N N 219 THR CA C N S 220 THR C C N N 221 THR O O N N 222 THR CB C N R 223 THR OG1 O N N 224 THR CG2 C N N 225 THR OXT O N N 226 THR H H N N 227 THR H2 H N N 228 THR HA H N N 229 THR HB H N N 230 THR HG1 H N N 231 THR HG21 H N N 232 THR HG22 H N N 233 THR HG23 H N N 234 THR HXT H N N 235 VAL N N N N 236 VAL CA C N S 237 VAL C C N N 238 VAL O O N N 239 VAL CB C N N 240 VAL CG1 C N N 241 VAL CG2 C N N 242 VAL OXT O N N 243 VAL H H N N 244 VAL H2 H N N 245 VAL HA H N N 246 VAL HB H N N 247 VAL HG11 H N N 248 VAL HG12 H N N 249 VAL HG13 H N N 250 VAL HG21 H N N 251 VAL HG22 H N N 252 VAL HG23 H N N 253 VAL HXT H N N 254 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 GLN N CA sing N N 54 GLN N H sing N N 55 GLN N H2 sing N N 56 GLN CA C sing N N 57 GLN CA CB sing N N 58 GLN CA HA sing N N 59 GLN C O doub N N 60 GLN C OXT sing N N 61 GLN CB CG sing N N 62 GLN CB HB2 sing N N 63 GLN CB HB3 sing N N 64 GLN CG CD sing N N 65 GLN CG HG2 sing N N 66 GLN CG HG3 sing N N 67 GLN CD OE1 doub N N 68 GLN CD NE2 sing N N 69 GLN NE2 HE21 sing N N 70 GLN NE2 HE22 sing N N 71 GLN OXT HXT sing N N 72 GLU N CA sing N N 73 GLU N H sing N N 74 GLU N H2 sing N N 75 GLU CA C sing N N 76 GLU CA CB sing N N 77 GLU CA HA sing N N 78 GLU C O doub N N 79 GLU C OXT sing N N 80 GLU CB CG sing N N 81 GLU CB HB2 sing N N 82 GLU CB HB3 sing N N 83 GLU CG CD sing N N 84 GLU CG HG2 sing N N 85 GLU CG HG3 sing N N 86 GLU CD OE1 doub N N 87 GLU CD OE2 sing N N 88 GLU OE2 HE2 sing N N 89 GLU OXT HXT sing N N 90 GLY N CA sing N N 91 GLY N H sing N N 92 GLY N H2 sing N N 93 GLY CA C sing N N 94 GLY CA HA2 sing N N 95 GLY CA HA3 sing N N 96 GLY C O doub N N 97 GLY C OXT sing N N 98 GLY OXT HXT sing N N 99 HIS N CA sing N N 100 HIS N H sing N N 101 HIS N H2 sing N N 102 HIS CA C sing N N 103 HIS CA CB sing N N 104 HIS CA HA sing N N 105 HIS C O doub N N 106 HIS C OXT sing N N 107 HIS CB CG sing N N 108 HIS CB HB2 sing N N 109 HIS CB HB3 sing N N 110 HIS CG ND1 sing Y N 111 HIS CG CD2 doub Y N 112 HIS ND1 CE1 doub Y N 113 HIS ND1 HD1 sing N N 114 HIS CD2 NE2 sing Y N 115 HIS CD2 HD2 sing N N 116 HIS CE1 NE2 sing Y N 117 HIS CE1 HE1 sing N N 118 HIS NE2 HE2 sing N N 119 HIS OXT HXT sing N N 120 HOH O H1 sing N N 121 HOH O H2 sing N N 122 ILE N CA sing N N 123 ILE N H sing N N 124 ILE N H2 sing N N 125 ILE CA C sing N N 126 ILE CA CB sing N N 127 ILE CA HA sing N N 128 ILE C O doub N N 129 ILE C OXT sing N N 130 ILE CB CG1 sing N N 131 ILE CB CG2 sing N N 132 ILE CB HB sing N N 133 ILE CG1 CD1 sing N N 134 ILE CG1 HG12 sing N N 135 ILE CG1 HG13 sing N N 136 ILE CG2 HG21 sing N N 137 ILE CG2 HG22 sing N N 138 ILE CG2 HG23 sing N N 139 ILE CD1 HD11 sing N N 140 ILE CD1 HD12 sing N N 141 ILE CD1 HD13 sing N N 142 ILE OXT HXT sing N N 143 LEU N CA sing N N 144 LEU N H sing N N 145 LEU N H2 sing N N 146 LEU CA C sing N N 147 LEU CA CB sing N N 148 LEU CA HA sing N N 149 LEU C O doub N N 150 LEU C OXT sing N N 151 LEU CB CG sing N N 152 LEU CB HB2 sing N N 153 LEU CB HB3 sing N N 154 LEU CG CD1 sing N N 155 LEU CG CD2 sing N N 156 LEU CG HG sing N N 157 LEU CD1 HD11 sing N N 158 LEU CD1 HD12 sing N N 159 LEU CD1 HD13 sing N N 160 LEU CD2 HD21 sing N N 161 LEU CD2 HD22 sing N N 162 LEU CD2 HD23 sing N N 163 LEU OXT HXT sing N N 164 LYS N CA sing N N 165 LYS N H sing N N 166 LYS N H2 sing N N 167 LYS CA C sing N N 168 LYS CA CB sing N N 169 LYS CA HA sing N N 170 LYS C O doub N N 171 LYS C OXT sing N N 172 LYS CB CG sing N N 173 LYS CB HB2 sing N N 174 LYS CB HB3 sing N N 175 LYS CG CD sing N N 176 LYS CG HG2 sing N N 177 LYS CG HG3 sing N N 178 LYS CD CE sing N N 179 LYS CD HD2 sing N N 180 LYS CD HD3 sing N N 181 LYS CE NZ sing N N 182 LYS CE HE2 sing N N 183 LYS CE HE3 sing N N 184 LYS NZ HZ1 sing N N 185 LYS NZ HZ2 sing N N 186 LYS NZ HZ3 sing N N 187 LYS OXT HXT sing N N 188 MET N CA sing N N 189 MET N H sing N N 190 MET N H2 sing N N 191 MET CA C sing N N 192 MET CA CB sing N N 193 MET CA HA sing N N 194 MET C O doub N N 195 MET C OXT sing N N 196 MET CB CG sing N N 197 MET CB HB2 sing N N 198 MET CB HB3 sing N N 199 MET CG SD sing N N 200 MET CG HG2 sing N N 201 MET CG HG3 sing N N 202 MET SD CE sing N N 203 MET CE HE1 sing N N 204 MET CE HE2 sing N N 205 MET CE HE3 sing N N 206 MET OXT HXT sing N N 207 THR N CA sing N N 208 THR N H sing N N 209 THR N H2 sing N N 210 THR CA C sing N N 211 THR CA CB sing N N 212 THR CA HA sing N N 213 THR C O doub N N 214 THR C OXT sing N N 215 THR CB OG1 sing N N 216 THR CB CG2 sing N N 217 THR CB HB sing N N 218 THR OG1 HG1 sing N N 219 THR CG2 HG21 sing N N 220 THR CG2 HG22 sing N N 221 THR CG2 HG23 sing N N 222 THR OXT HXT sing N N 223 VAL N CA sing N N 224 VAL N H sing N N 225 VAL N H2 sing N N 226 VAL CA C sing N N 227 VAL CA CB sing N N 228 VAL CA HA sing N N 229 VAL C O doub N N 230 VAL C OXT sing N N 231 VAL CB CG1 sing N N 232 VAL CB CG2 sing N N 233 VAL CB HB sing N N 234 VAL CG1 HG11 sing N N 235 VAL CG1 HG12 sing N N 236 VAL CG1 HG13 sing N N 237 VAL CG2 HG21 sing N N 238 VAL CG2 HG22 sing N N 239 VAL CG2 HG23 sing N N 240 VAL OXT HXT sing N N 241 # _pdbx_audit_support.funding_organization ;Department of Biotechnology (DBT) Indian Institute of Science, (IISc) Partnership Program for Advanced Research in Biological Sciences and Bioengineering ; _pdbx_audit_support.country India _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 5Y2E _atom_sites.fract_transf_matrix[1][1] 0.023068 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020773 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008156 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_