HEADER IMMUNE SYSTEM 29-JUL-17 5Y3K TITLE CRYSTAL STRUCTURE OF HORSE TLR9 IN COMPLEX WITH TWO DNAS (CPG DNA AND TITLE 2 GCGCAC DNA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 9; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 26-819; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'-D(*AP*GP*GP*CP*GP*TP*TP*TP*TP*T)-3'); COMPND 8 CHAIN: C, D; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (5'-D(*GP*CP*GP*CP*AP*C)-3'); COMPND 12 CHAIN: E, F; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; SOURCE 3 ORGANISM_COMMON: HORSE; SOURCE 4 ORGANISM_TAXID: 9796; SOURCE 5 GENE: TLR9; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 15 ORGANISM_TAXID: 32630 KEYWDS INNATE IMMUNITY, TOLL-LIKE RECEPTOR, LEUCINE-RICH REPEAT, DNA KEYWDS 2 BINDING, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR U.OHTO,T.SHIMIZU REVDAT 4 22-NOV-23 5Y3K 1 HETSYN REVDAT 3 29-JUL-20 5Y3K 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 02-MAY-18 5Y3K 1 JRNL REVDAT 1 18-APR-18 5Y3K 0 JRNL AUTH U.OHTO,H.ISHIDA,T.SHIBATA,R.SATO,K.MIYAKE,T.SHIMIZU JRNL TITL TOLL-LIKE RECEPTOR 9 CONTAINS TWO DNA BINDING SITES THAT JRNL TITL 2 FUNCTION COOPERATIVELY TO PROMOTE RECEPTOR DIMERIZATION AND JRNL TITL 3 ACTIVATION JRNL REF IMMUNITY V. 48 649 2018 JRNL REFN ISSN 1097-4180 JRNL PMID 29625894 JRNL DOI 10.1016/J.IMMUNI.2018.03.013 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 47705 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2533 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3524 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.3610 REMARK 3 BIN FREE R VALUE SET COUNT : 178 REMARK 3 BIN FREE R VALUE : 0.3760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11786 REMARK 3 NUCLEIC ACID ATOMS : 644 REMARK 3 HETEROGEN ATOMS : 266 REMARK 3 SOLVENT ATOMS : 70 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.38000 REMARK 3 B22 (A**2) : -2.96000 REMARK 3 B33 (A**2) : 0.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.350 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.308 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 35.444 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 13081 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 11775 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 17954 ; 1.446 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): 27365 ; 1.003 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1496 ; 6.450 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 536 ;37.708 ;23.545 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2004 ;14.546 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 84 ;17.710 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2060 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 13878 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2625 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5996 ; 1.867 ; 5.260 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 5995 ; 1.864 ; 5.260 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7488 ; 3.166 ; 7.886 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 7489 ; 3.167 ; 7.887 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 7085 ; 1.884 ; 5.472 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 7084 ; 1.884 ; 5.471 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 10466 ; 3.224 ; 8.145 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 13564 ; 5.093 ;59.255 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 13563 ; 5.092 ;59.250 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 28 807 B 28 807 48188 0.01 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 28 A 1009 REMARK 3 ORIGIN FOR THE GROUP (A): 0.3843 -0.6980 52.2402 REMARK 3 T TENSOR REMARK 3 T11: 0.0796 T22: 0.0302 REMARK 3 T33: 0.0532 T12: -0.0131 REMARK 3 T13: -0.0058 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.1872 L22: 0.1745 REMARK 3 L33: 0.4102 L12: -0.0290 REMARK 3 L13: -0.1205 L23: -0.0237 REMARK 3 S TENSOR REMARK 3 S11: -0.0366 S12: 0.0458 S13: 0.0432 REMARK 3 S21: -0.0722 S22: 0.0175 S23: 0.0068 REMARK 3 S31: 0.0848 S32: 0.0154 S33: 0.0191 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 10 REMARK 3 ORIGIN FOR THE GROUP (A): 14.5147 -14.8389 61.2230 REMARK 3 T TENSOR REMARK 3 T11: 0.2776 T22: 0.1932 REMARK 3 T33: 0.3411 T12: 0.2281 REMARK 3 T13: 0.2424 T23: 0.1719 REMARK 3 L TENSOR REMARK 3 L11: 0.0373 L22: 7.7305 REMARK 3 L33: 0.0148 L12: -0.5196 REMARK 3 L13: 0.0233 L23: -0.3344 REMARK 3 S TENSOR REMARK 3 S11: -0.0645 S12: -0.0291 S13: 0.0528 REMARK 3 S21: -0.1128 S22: 0.0712 S23: -1.0958 REMARK 3 S31: -0.0041 S32: -0.0126 S33: -0.0066 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 6 REMARK 3 ORIGIN FOR THE GROUP (A): 16.2917 26.5140 67.9934 REMARK 3 T TENSOR REMARK 3 T11: 0.1409 T22: 0.1556 REMARK 3 T33: 0.1514 T12: -0.1117 REMARK 3 T13: -0.0142 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.2728 L22: 6.2567 REMARK 3 L33: 0.0644 L12: 1.2617 REMARK 3 L13: -0.1039 L23: -0.5794 REMARK 3 S TENSOR REMARK 3 S11: 0.0598 S12: -0.0834 S13: -0.0726 REMARK 3 S21: 0.0232 S22: -0.1398 S23: -0.3648 REMARK 3 S31: 0.0110 S32: -0.0179 S33: 0.0800 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 28 B 1010 REMARK 3 ORIGIN FOR THE GROUP (A): -10.8483 4.7009 17.3775 REMARK 3 T TENSOR REMARK 3 T11: 0.1249 T22: 0.0464 REMARK 3 T33: 0.0336 T12: 0.0602 REMARK 3 T13: -0.0021 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.2210 L22: 0.1131 REMARK 3 L33: 0.6037 L12: 0.0478 REMARK 3 L13: -0.0281 L23: -0.0341 REMARK 3 S TENSOR REMARK 3 S11: -0.0794 S12: -0.0860 S13: -0.0362 REMARK 3 S21: 0.0776 S22: 0.0082 S23: -0.0313 REMARK 3 S31: -0.0522 S32: -0.0558 S33: 0.0712 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 10 REMARK 3 ORIGIN FOR THE GROUP (A): -24.7971 -9.5118 8.3790 REMARK 3 T TENSOR REMARK 3 T11: 0.2253 T22: 0.1626 REMARK 3 T33: 0.2949 T12: -0.1341 REMARK 3 T13: 0.1789 T23: -0.1338 REMARK 3 L TENSOR REMARK 3 L11: 0.2656 L22: 6.7374 REMARK 3 L33: 1.3936 L12: 0.3901 REMARK 3 L13: 0.6000 L23: 0.5803 REMARK 3 S TENSOR REMARK 3 S11: -0.1928 S12: -0.0187 S13: 0.0223 REMARK 3 S21: -0.2095 S22: 0.1961 S23: 0.7191 REMARK 3 S31: -0.2037 S32: -0.0878 S33: -0.0033 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 6 REMARK 3 ORIGIN FOR THE GROUP (A): -26.8021 31.9060 1.5259 REMARK 3 T TENSOR REMARK 3 T11: 0.2135 T22: 0.2048 REMARK 3 T33: 0.1463 T12: 0.0252 REMARK 3 T13: -0.0182 T23: 0.0511 REMARK 3 L TENSOR REMARK 3 L11: 0.7315 L22: 5.4257 REMARK 3 L33: 0.3479 L12: -1.5966 REMARK 3 L13: -0.0530 L23: 0.9311 REMARK 3 S TENSOR REMARK 3 S11: -0.1639 S12: 0.2148 S13: -0.1205 REMARK 3 S21: 0.2678 S22: -0.0705 S23: 0.7554 REMARK 3 S31: -0.0559 S32: 0.1346 S33: 0.2344 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5Y3K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1300004520. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50239 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3WPC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4-6%(W/V) PEG 4000, 4-6%(V/V) 2 REMARK 280 -PROPANOL, 0.2M NACL, 0.1M CITRATE-NAOH PH 5.6, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.42450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.25100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.42450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 63.25100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -20.77486 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 139.17398 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 22 REMARK 465 SER A 23 REMARK 465 PRO A 24 REMARK 465 TRP A 25 REMARK 465 GLN A 26 REMARK 465 GLY A 27 REMARK 465 PRO A 433 REMARK 465 VAL A 434 REMARK 465 ALA A 435 REMARK 465 THR A 436 REMARK 465 THR A 437 REMARK 465 GLY A 438 REMARK 465 GLU A 439 REMARK 465 VAL A 440 REMARK 465 ASP A 441 REMARK 465 GLY A 442 REMARK 465 GLY A 443 REMARK 465 LYS A 444 REMARK 465 LYS A 445 REMARK 465 VAL A 446 REMARK 465 TRP A 447 REMARK 465 LEU A 448 REMARK 465 THR A 449 REMARK 465 SER A 450 REMARK 465 ARG A 451 REMARK 465 ASP A 452 REMARK 465 LEU A 453 REMARK 465 THR A 454 REMARK 465 PRO A 455 REMARK 465 GLY A 456 REMARK 465 PRO A 457 REMARK 465 LEU A 458 REMARK 465 ASP A 459 REMARK 465 THR A 460 REMARK 465 PRO A 461 REMARK 465 SER A 462 REMARK 465 LEU A 808 REMARK 465 CYS A 809 REMARK 465 LEU A 810 REMARK 465 ASP A 811 REMARK 465 GLU A 812 REMARK 465 SER A 813 REMARK 465 LEU A 814 REMARK 465 SER A 815 REMARK 465 TRP A 816 REMARK 465 ASP A 817 REMARK 465 GLU A 818 REMARK 465 PHE A 819 REMARK 465 LEU A 820 REMARK 465 VAL A 821 REMARK 465 PRO A 822 REMARK 465 ARG A 823 REMARK 465 ARG B 22 REMARK 465 SER B 23 REMARK 465 PRO B 24 REMARK 465 TRP B 25 REMARK 465 GLN B 26 REMARK 465 GLY B 27 REMARK 465 PRO B 433 REMARK 465 VAL B 434 REMARK 465 ALA B 435 REMARK 465 THR B 436 REMARK 465 THR B 437 REMARK 465 GLY B 438 REMARK 465 GLU B 439 REMARK 465 VAL B 440 REMARK 465 ASP B 441 REMARK 465 GLY B 442 REMARK 465 GLY B 443 REMARK 465 LYS B 444 REMARK 465 LYS B 445 REMARK 465 VAL B 446 REMARK 465 TRP B 447 REMARK 465 LEU B 448 REMARK 465 THR B 449 REMARK 465 SER B 450 REMARK 465 ARG B 451 REMARK 465 ASP B 452 REMARK 465 LEU B 453 REMARK 465 THR B 454 REMARK 465 PRO B 455 REMARK 465 GLY B 456 REMARK 465 PRO B 457 REMARK 465 LEU B 458 REMARK 465 ASP B 459 REMARK 465 THR B 460 REMARK 465 PRO B 461 REMARK 465 SER B 462 REMARK 465 LEU B 808 REMARK 465 CYS B 809 REMARK 465 LEU B 810 REMARK 465 ASP B 811 REMARK 465 GLU B 812 REMARK 465 SER B 813 REMARK 465 LEU B 814 REMARK 465 SER B 815 REMARK 465 TRP B 816 REMARK 465 ASP B 817 REMARK 465 GLU B 818 REMARK 465 PHE B 819 REMARK 465 LEU B 820 REMARK 465 VAL B 821 REMARK 465 PRO B 822 REMARK 465 ARG B 823 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 56 125.30 70.75 REMARK 500 ARG A 62 0.45 -66.43 REMARK 500 LEU A 86 65.39 -106.75 REMARK 500 LEU A 166 63.28 -109.12 REMARK 500 CYS A 178 89.04 -160.76 REMARK 500 ASN A 182 63.11 -153.94 REMARK 500 LEU A 206 51.51 -142.18 REMARK 500 SER A 217 74.69 56.47 REMARK 500 ASN A 230 -155.10 -105.15 REMARK 500 LEU A 243 54.22 -107.61 REMARK 500 LEU A 283 61.04 -119.79 REMARK 500 LEU A 307 54.63 -116.82 REMARK 500 LYS A 326 -50.80 -122.32 REMARK 500 THR A 327 156.95 -45.38 REMARK 500 PHE A 375 92.41 74.78 REMARK 500 ASN A 506 -155.04 -104.71 REMARK 500 TYR A 536 -50.76 -148.95 REMARK 500 PHE A 541 -6.18 77.82 REMARK 500 MET A 561 89.12 -69.56 REMARK 500 GLN A 637 57.80 33.77 REMARK 500 ASN A 663 -164.80 -100.54 REMARK 500 LEU A 676 73.63 -118.67 REMARK 500 SER A 693 -165.46 -164.44 REMARK 500 ASN A 711 -161.42 -103.22 REMARK 500 ASN A 735 -163.37 -126.49 REMARK 500 PHE B 56 124.83 70.26 REMARK 500 ARG B 62 1.52 -67.16 REMARK 500 ASN B 64 -9.97 -59.21 REMARK 500 LEU B 86 65.91 -106.95 REMARK 500 LEU B 166 63.18 -109.24 REMARK 500 CYS B 178 89.70 -160.60 REMARK 500 ASN B 182 63.31 -153.32 REMARK 500 LEU B 206 51.07 -141.99 REMARK 500 SER B 217 75.47 55.10 REMARK 500 ASN B 230 -155.15 -104.81 REMARK 500 LEU B 243 53.74 -106.92 REMARK 500 LEU B 283 60.62 -118.74 REMARK 500 LEU B 307 57.55 -115.57 REMARK 500 LYS B 326 -50.83 -122.45 REMARK 500 THR B 327 156.69 -44.32 REMARK 500 PHE B 375 92.04 75.63 REMARK 500 ASN B 506 -154.92 -104.63 REMARK 500 TYR B 536 -50.42 -148.05 REMARK 500 PHE B 541 -5.16 76.82 REMARK 500 MET B 561 89.91 -69.66 REMARK 500 GLN B 637 58.92 32.41 REMARK 500 ASN B 663 -164.62 -100.78 REMARK 500 LEU B 676 73.85 -118.60 REMARK 500 SER B 693 -166.01 -163.84 REMARK 500 ASN B 711 -161.55 -103.36 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 5Y3K A 26 819 UNP Q2EEY0 TLR9_HORSE 26 819 DBREF 5Y3K C 1 10 PDB 5Y3K 5Y3K 1 10 DBREF 5Y3K E 1 6 PDB 5Y3K 5Y3K 1 6 DBREF 5Y3K B 26 819 UNP Q2EEY0 TLR9_HORSE 26 819 DBREF 5Y3K D 1 10 PDB 5Y3K 5Y3K 1 10 DBREF 5Y3K F 1 6 PDB 5Y3K 5Y3K 1 6 SEQADV 5Y3K ARG A 22 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K SER A 23 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K PRO A 24 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K TRP A 25 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K GLU A 818 UNP Q2EEY0 CYS 818 CONFLICT SEQADV 5Y3K LEU A 820 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K VAL A 821 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K PRO A 822 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K ARG A 823 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K ARG B 22 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K SER B 23 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K PRO B 24 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K TRP B 25 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K GLU B 818 UNP Q2EEY0 CYS 818 CONFLICT SEQADV 5Y3K LEU B 820 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K VAL B 821 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K PRO B 822 UNP Q2EEY0 EXPRESSION TAG SEQADV 5Y3K ARG B 823 UNP Q2EEY0 EXPRESSION TAG SEQRES 1 A 802 ARG SER PRO TRP GLN GLY THR LEU PRO PRO PHE LEU PRO SEQRES 2 A 802 CYS GLU LEU GLN PRO HIS GLY LEU VAL ASN CYS ASN TRP SEQRES 3 A 802 LEU PHE LEU LYS SER VAL PRO HIS PHE SER ALA ALA ALA SEQRES 4 A 802 PRO ARG ASP ASN VAL THR SER LEU SER LEU LEU SER ASN SEQRES 5 A 802 ARG ILE HIS HIS LEU HIS ASP SER ASP PHE ALA GLN LEU SEQRES 6 A 802 SER ASN LEU GLN LYS LEU ASN LEU LYS TRP ASN CYS PRO SEQRES 7 A 802 PRO ALA GLY LEU SER PRO MET HIS PHE PRO CYS HIS MET SEQRES 8 A 802 THR ILE GLU PRO ASN THR PHE LEU ALA VAL PRO THR LEU SEQRES 9 A 802 GLU GLU LEU ASN LEU SER TYR ASN GLY ILE THR THR VAL SEQRES 10 A 802 PRO ALA LEU PRO SER SER LEU VAL SER LEU ILE LEU SER SEQRES 11 A 802 ARG THR ASN ILE LEU GLN LEU ASP PRO THR SER LEU THR SEQRES 12 A 802 GLY LEU HIS ALA LEU ARG PHE LEU TYR MET ASP GLY ASN SEQRES 13 A 802 CYS TYR TYR LYS ASN PRO CYS GLY ARG ALA LEU GLU VAL SEQRES 14 A 802 ALA PRO GLY ALA LEU LEU GLY LEU GLY ASN LEU THR HIS SEQRES 15 A 802 LEU SER LEU LYS TYR ASN ASN LEU THR THR VAL PRO ARG SEQRES 16 A 802 SER LEU PRO PRO SER LEU GLU TYR LEU LEU LEU SER TYR SEQRES 17 A 802 ASN HIS ILE VAL THR LEU ALA PRO GLU ASP LEU ALA ASN SEQRES 18 A 802 LEU THR ALA LEU ARG VAL LEU ASP VAL GLY GLY ASN CYS SEQRES 19 A 802 ARG ARG CYS ASP HIS ALA ARG ASN PRO CYS VAL GLU CYS SEQRES 20 A 802 PRO HIS LYS PHE PRO GLN LEU HIS SER ASP THR PHE SER SEQRES 21 A 802 HIS LEU SER ARG LEU GLU GLY LEU VAL LEU LYS ASP SER SEQRES 22 A 802 SER LEU TYR GLN LEU ASN PRO ARG TRP PHE ARG GLY LEU SEQRES 23 A 802 GLY ASN LEU THR VAL LEU ASP LEU SER GLU ASN PHE LEU SEQRES 24 A 802 TYR ASP CYS ILE THR LYS THR LYS ALA PHE GLN GLY LEU SEQRES 25 A 802 ALA GLN LEU ARG ARG LEU ASN LEU SER PHE ASN TYR HIS SEQRES 26 A 802 LYS LYS VAL SER PHE ALA HIS LEU THR LEU ALA PRO SER SEQRES 27 A 802 PHE GLY SER LEU LEU SER LEU GLN GLU LEU ASP MET HIS SEQRES 28 A 802 GLY ILE PHE PHE ARG SER LEU SER GLN LYS THR LEU GLN SEQRES 29 A 802 PRO LEU ALA ARG LEU PRO MET LEU GLN ARG LEU TYR LEU SEQRES 30 A 802 GLN MET ASN PHE ILE ASN GLN ALA GLN LEU GLY ILE PHE SEQRES 31 A 802 LYS ASP PHE PRO GLY LEU ARG TYR ILE ASP LEU SER ASP SEQRES 32 A 802 ASN ARG ILE SER GLY ALA VAL GLU PRO VAL ALA THR THR SEQRES 33 A 802 GLY GLU VAL ASP GLY GLY LYS LYS VAL TRP LEU THR SER SEQRES 34 A 802 ARG ASP LEU THR PRO GLY PRO LEU ASP THR PRO SER SER SEQRES 35 A 802 GLU ASP PHE MET PRO SER CYS LYS ASN LEU SER PHE THR SEQRES 36 A 802 LEU ASP LEU SER ARG ASN ASN LEU VAL THR VAL GLN PRO SEQRES 37 A 802 GLU MET PHE ALA GLN LEU SER ARG LEU GLN CYS LEU ARG SEQRES 38 A 802 LEU SER HIS ASN SER ILE SER GLN ALA VAL ASN GLY SER SEQRES 39 A 802 GLN PHE VAL PRO LEU THR SER LEU GLN VAL LEU ASP LEU SEQRES 40 A 802 SER HIS ASN LYS LEU ASP LEU TYR HIS GLY ARG SER PHE SEQRES 41 A 802 THR GLU LEU PRO ARG LEU GLU ALA LEU ASP LEU SER TYR SEQRES 42 A 802 ASN SER GLN PRO PHE SER MET ARG GLY VAL GLY HIS ASN SEQRES 43 A 802 LEU SER PHE VAL ALA GLN LEU PRO THR LEU ARG TYR LEU SEQRES 44 A 802 SER LEU ALA HIS ASN GLY ILE HIS SER ARG VAL SER GLN SEQRES 45 A 802 GLN LEU CYS SER THR SER LEU TRP ALA LEU ASP PHE SER SEQRES 46 A 802 GLY ASN SER LEU SER GLN MET TRP ALA GLU GLY ASP LEU SEQRES 47 A 802 TYR LEU ARG PHE PHE GLN GLY LEU ARG SER LEU ILE ARG SEQRES 48 A 802 LEU ASP LEU SER GLN ASN ARG LEU HIS THR LEU LEU PRO SEQRES 49 A 802 CYS THR LEU GLY ASN LEU PRO LYS SER LEU GLN LEU LEU SEQRES 50 A 802 ARG LEU ARG ASN ASN TYR LEU ALA PHE PHE ASN TRP SER SEQRES 51 A 802 SER LEU THR LEU LEU PRO ASN LEU GLU THR LEU ASP LEU SEQRES 52 A 802 ALA GLY ASN GLN LEU LYS ALA LEU SER ASN GLY SER LEU SEQRES 53 A 802 PRO SER GLY THR GLN LEU GLN ARG LEU ASP VAL SER ARG SEQRES 54 A 802 ASN SER ILE ILE PHE VAL VAL PRO GLY PHE PHE ALA LEU SEQRES 55 A 802 ALA THR ARG LEU ARG GLU LEU ASN LEU SER ALA ASN ALA SEQRES 56 A 802 LEU ARG THR VAL GLU PRO SER TRP PHE GLY PHE LEU ALA SEQRES 57 A 802 GLY SER LEU GLU VAL LEU ASP VAL SER ALA ASN PRO LEU SEQRES 58 A 802 HIS CYS ALA CYS GLY ALA ALA PHE VAL ASP PHE LEU LEU SEQRES 59 A 802 GLN VAL GLN ALA ALA VAL PRO GLY LEU PRO SER ARG VAL SEQRES 60 A 802 LYS CYS GLY SER PRO GLY GLN LEU GLN GLY ARG SER ILE SEQRES 61 A 802 PHE ALA GLN ASP LEU ARG LEU CYS LEU ASP GLU SER LEU SEQRES 62 A 802 SER TRP ASP GLU PHE LEU VAL PRO ARG SEQRES 1 C 10 DA DG DG DC DG DT DT DT DT DT SEQRES 1 E 6 DG DC DG DC DA DC SEQRES 1 B 802 ARG SER PRO TRP GLN GLY THR LEU PRO PRO PHE LEU PRO SEQRES 2 B 802 CYS GLU LEU GLN PRO HIS GLY LEU VAL ASN CYS ASN TRP SEQRES 3 B 802 LEU PHE LEU LYS SER VAL PRO HIS PHE SER ALA ALA ALA SEQRES 4 B 802 PRO ARG ASP ASN VAL THR SER LEU SER LEU LEU SER ASN SEQRES 5 B 802 ARG ILE HIS HIS LEU HIS ASP SER ASP PHE ALA GLN LEU SEQRES 6 B 802 SER ASN LEU GLN LYS LEU ASN LEU LYS TRP ASN CYS PRO SEQRES 7 B 802 PRO ALA GLY LEU SER PRO MET HIS PHE PRO CYS HIS MET SEQRES 8 B 802 THR ILE GLU PRO ASN THR PHE LEU ALA VAL PRO THR LEU SEQRES 9 B 802 GLU GLU LEU ASN LEU SER TYR ASN GLY ILE THR THR VAL SEQRES 10 B 802 PRO ALA LEU PRO SER SER LEU VAL SER LEU ILE LEU SER SEQRES 11 B 802 ARG THR ASN ILE LEU GLN LEU ASP PRO THR SER LEU THR SEQRES 12 B 802 GLY LEU HIS ALA LEU ARG PHE LEU TYR MET ASP GLY ASN SEQRES 13 B 802 CYS TYR TYR LYS ASN PRO CYS GLY ARG ALA LEU GLU VAL SEQRES 14 B 802 ALA PRO GLY ALA LEU LEU GLY LEU GLY ASN LEU THR HIS SEQRES 15 B 802 LEU SER LEU LYS TYR ASN ASN LEU THR THR VAL PRO ARG SEQRES 16 B 802 SER LEU PRO PRO SER LEU GLU TYR LEU LEU LEU SER TYR SEQRES 17 B 802 ASN HIS ILE VAL THR LEU ALA PRO GLU ASP LEU ALA ASN SEQRES 18 B 802 LEU THR ALA LEU ARG VAL LEU ASP VAL GLY GLY ASN CYS SEQRES 19 B 802 ARG ARG CYS ASP HIS ALA ARG ASN PRO CYS VAL GLU CYS SEQRES 20 B 802 PRO HIS LYS PHE PRO GLN LEU HIS SER ASP THR PHE SER SEQRES 21 B 802 HIS LEU SER ARG LEU GLU GLY LEU VAL LEU LYS ASP SER SEQRES 22 B 802 SER LEU TYR GLN LEU ASN PRO ARG TRP PHE ARG GLY LEU SEQRES 23 B 802 GLY ASN LEU THR VAL LEU ASP LEU SER GLU ASN PHE LEU SEQRES 24 B 802 TYR ASP CYS ILE THR LYS THR LYS ALA PHE GLN GLY LEU SEQRES 25 B 802 ALA GLN LEU ARG ARG LEU ASN LEU SER PHE ASN TYR HIS SEQRES 26 B 802 LYS LYS VAL SER PHE ALA HIS LEU THR LEU ALA PRO SER SEQRES 27 B 802 PHE GLY SER LEU LEU SER LEU GLN GLU LEU ASP MET HIS SEQRES 28 B 802 GLY ILE PHE PHE ARG SER LEU SER GLN LYS THR LEU GLN SEQRES 29 B 802 PRO LEU ALA ARG LEU PRO MET LEU GLN ARG LEU TYR LEU SEQRES 30 B 802 GLN MET ASN PHE ILE ASN GLN ALA GLN LEU GLY ILE PHE SEQRES 31 B 802 LYS ASP PHE PRO GLY LEU ARG TYR ILE ASP LEU SER ASP SEQRES 32 B 802 ASN ARG ILE SER GLY ALA VAL GLU PRO VAL ALA THR THR SEQRES 33 B 802 GLY GLU VAL ASP GLY GLY LYS LYS VAL TRP LEU THR SER SEQRES 34 B 802 ARG ASP LEU THR PRO GLY PRO LEU ASP THR PRO SER SER SEQRES 35 B 802 GLU ASP PHE MET PRO SER CYS LYS ASN LEU SER PHE THR SEQRES 36 B 802 LEU ASP LEU SER ARG ASN ASN LEU VAL THR VAL GLN PRO SEQRES 37 B 802 GLU MET PHE ALA GLN LEU SER ARG LEU GLN CYS LEU ARG SEQRES 38 B 802 LEU SER HIS ASN SER ILE SER GLN ALA VAL ASN GLY SER SEQRES 39 B 802 GLN PHE VAL PRO LEU THR SER LEU GLN VAL LEU ASP LEU SEQRES 40 B 802 SER HIS ASN LYS LEU ASP LEU TYR HIS GLY ARG SER PHE SEQRES 41 B 802 THR GLU LEU PRO ARG LEU GLU ALA LEU ASP LEU SER TYR SEQRES 42 B 802 ASN SER GLN PRO PHE SER MET ARG GLY VAL GLY HIS ASN SEQRES 43 B 802 LEU SER PHE VAL ALA GLN LEU PRO THR LEU ARG TYR LEU SEQRES 44 B 802 SER LEU ALA HIS ASN GLY ILE HIS SER ARG VAL SER GLN SEQRES 45 B 802 GLN LEU CYS SER THR SER LEU TRP ALA LEU ASP PHE SER SEQRES 46 B 802 GLY ASN SER LEU SER GLN MET TRP ALA GLU GLY ASP LEU SEQRES 47 B 802 TYR LEU ARG PHE PHE GLN GLY LEU ARG SER LEU ILE ARG SEQRES 48 B 802 LEU ASP LEU SER GLN ASN ARG LEU HIS THR LEU LEU PRO SEQRES 49 B 802 CYS THR LEU GLY ASN LEU PRO LYS SER LEU GLN LEU LEU SEQRES 50 B 802 ARG LEU ARG ASN ASN TYR LEU ALA PHE PHE ASN TRP SER SEQRES 51 B 802 SER LEU THR LEU LEU PRO ASN LEU GLU THR LEU ASP LEU SEQRES 52 B 802 ALA GLY ASN GLN LEU LYS ALA LEU SER ASN GLY SER LEU SEQRES 53 B 802 PRO SER GLY THR GLN LEU GLN ARG LEU ASP VAL SER ARG SEQRES 54 B 802 ASN SER ILE ILE PHE VAL VAL PRO GLY PHE PHE ALA LEU SEQRES 55 B 802 ALA THR ARG LEU ARG GLU LEU ASN LEU SER ALA ASN ALA SEQRES 56 B 802 LEU ARG THR VAL GLU PRO SER TRP PHE GLY PHE LEU ALA SEQRES 57 B 802 GLY SER LEU GLU VAL LEU ASP VAL SER ALA ASN PRO LEU SEQRES 58 B 802 HIS CYS ALA CYS GLY ALA ALA PHE VAL ASP PHE LEU LEU SEQRES 59 B 802 GLN VAL GLN ALA ALA VAL PRO GLY LEU PRO SER ARG VAL SEQRES 60 B 802 LYS CYS GLY SER PRO GLY GLN LEU GLN GLY ARG SER ILE SEQRES 61 B 802 PHE ALA GLN ASP LEU ARG LEU CYS LEU ASP GLU SER LEU SEQRES 62 B 802 SER TRP ASP GLU PHE LEU VAL PRO ARG SEQRES 1 D 10 DA DG DG DC DG DT DT DT DT DT SEQRES 1 F 6 DG DC DG DC DA DC HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET NAG A1003 14 HET NAG A1004 14 HET NAG A1005 14 HET NAG A1006 14 HET NAG A1007 14 HET NAG A1008 14 HET NAG A1009 14 HET NAG B1003 14 HET NAG B1004 14 HET NAG B1005 14 HET NAG B1006 14 HET NAG B1007 14 HET NAG B1008 14 HET NAG B1009 14 HET NAG B1010 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 7 NAG 19(C8 H15 N O6) FORMUL 24 HOH *70(H2 O) HELIX 1 AA1 ALA A 236 ALA A 241 5 6 HELIX 2 AA2 ARG A 257 ALA A 261 5 5 HELIX 3 AA3 ASN A 300 ARG A 305 5 6 HELIX 4 AA4 ASP A 322 THR A 327 1 6 HELIX 5 AA5 ALA A 357 LEU A 363 5 7 HELIX 6 AA6 SER A 380 GLN A 385 1 6 HELIX 7 AA7 PRO A 386 ALA A 388 5 3 HELIX 8 AA8 LEU A 408 LYS A 412 5 5 HELIX 9 AA9 GLN A 488 ALA A 493 5 6 HELIX 10 AB1 ASN A 555 MET A 561 1 7 HELIX 11 AB2 LEU A 568 LEU A 574 5 7 HELIX 12 AB3 SER A 609 GLU A 616 1 8 HELIX 13 AB4 LEU A 644 ASN A 650 1 7 HELIX 14 AB5 ASN A 669 LEU A 676 5 8 HELIX 15 AB6 GLU A 741 GLY A 746 5 6 HELIX 16 AB7 LEU A 748 LEU A 752 5 5 HELIX 17 AB8 ALA A 768 VAL A 777 1 10 HELIX 18 AB9 GLN A 778 VAL A 781 5 4 HELIX 19 AC1 GLY A 783 VAL A 788 1 6 HELIX 20 AC2 PRO A 793 GLN A 797 5 5 HELIX 21 AC3 ALA B 236 ALA B 241 5 6 HELIX 22 AC4 ARG B 257 ALA B 261 5 5 HELIX 23 AC5 ASN B 300 ARG B 305 5 6 HELIX 24 AC6 ASP B 322 THR B 327 1 6 HELIX 25 AC7 ALA B 357 LEU B 363 5 7 HELIX 26 AC8 SER B 380 GLN B 385 1 6 HELIX 27 AC9 PRO B 386 ALA B 388 5 3 HELIX 28 AD1 LEU B 408 LYS B 412 5 5 HELIX 29 AD2 GLN B 488 ALA B 493 5 6 HELIX 30 AD3 ASN B 555 MET B 561 1 7 HELIX 31 AD4 LEU B 568 LEU B 574 5 7 HELIX 32 AD5 SER B 609 GLU B 616 1 8 HELIX 33 AD6 LEU B 644 ASN B 650 1 7 HELIX 34 AD7 ASN B 669 LEU B 676 5 8 HELIX 35 AD8 GLU B 741 GLY B 746 5 6 HELIX 36 AD9 LEU B 748 LEU B 752 5 5 HELIX 37 AE1 ALA B 768 VAL B 777 1 10 HELIX 38 AE2 GLN B 778 VAL B 781 5 4 HELIX 39 AE3 PRO B 793 GLN B 797 5 5 SHEET 1 AA128 GLU A 36 GLN A 38 0 SHEET 2 AA128 LEU A 42 ASN A 44 -1 O LEU A 42 N GLN A 38 SHEET 3 AA128 SER A 67 SER A 69 1 O SER A 69 N VAL A 43 SHEET 4 AA128 LYS A 91 ASN A 93 1 O LYS A 91 N LEU A 68 SHEET 5 AA128 GLU A 127 ASN A 129 1 O GLU A 127 N LEU A 92 SHEET 6 AA128 SER A 147 ILE A 149 1 O SER A 147 N LEU A 128 SHEET 7 AA128 PHE A 171 TYR A 173 1 O PHE A 171 N LEU A 148 SHEET 8 AA128 HIS A 203 SER A 205 1 O HIS A 203 N LEU A 172 SHEET 9 AA128 TYR A 224 LEU A 226 1 O TYR A 224 N LEU A 204 SHEET 10 AA128 VAL A 248 ASP A 250 1 O VAL A 248 N LEU A 225 SHEET 11 AA128 GLY A 288 VAL A 290 1 O GLY A 288 N LEU A 249 SHEET 12 AA128 VAL A 312 ASP A 314 1 O VAL A 312 N LEU A 289 SHEET 13 AA128 ARG A 338 ASN A 340 1 O ARG A 338 N LEU A 313 SHEET 14 AA128 GLU A 368 ASP A 370 1 O ASP A 370 N LEU A 339 SHEET 15 AA128 ARG A 395 TYR A 397 1 O TYR A 397 N LEU A 369 SHEET 16 AA128 TYR A 419 ASP A 421 1 O ASP A 421 N LEU A 396 SHEET 17 AA128 THR A 476 ASP A 478 1 O ASP A 478 N ILE A 420 SHEET 18 AA128 CYS A 500 ARG A 502 1 O CYS A 500 N LEU A 477 SHEET 19 AA128 VAL A 525 ASP A 527 1 O ASP A 527 N LEU A 501 SHEET 20 AA128 ALA A 549 ASP A 551 1 O ALA A 549 N LEU A 526 SHEET 21 AA128 TYR A 579 SER A 581 1 O TYR A 579 N LEU A 550 SHEET 22 AA128 ALA A 602 ASP A 604 1 O ASP A 604 N LEU A 580 SHEET 23 AA128 ARG A 632 ASP A 634 1 O ASP A 634 N LEU A 603 SHEET 24 AA128 LEU A 657 ARG A 659 1 O ARG A 659 N LEU A 633 SHEET 25 AA128 THR A 681 ASP A 683 1 O ASP A 683 N LEU A 658 SHEET 26 AA128 ARG A 705 ASP A 707 1 O ASP A 707 N LEU A 682 SHEET 27 AA128 GLU A 729 ASN A 731 1 O ASN A 731 N LEU A 706 SHEET 28 AA128 VAL A 754 ASP A 756 1 O VAL A 754 N LEU A 730 SHEET 1 AA2 2 HIS A 77 LEU A 78 0 SHEET 2 AA2 2 THR A 113 ILE A 114 1 O THR A 113 N LEU A 78 SHEET 1 AA3 2 GLN A 157 LEU A 158 0 SHEET 2 AA3 2 GLU A 189 VAL A 190 1 O GLU A 189 N LEU A 158 SHEET 1 AA4 2 THR A 234 LEU A 235 0 SHEET 2 AA4 2 GLN A 274 LEU A 275 1 O GLN A 274 N LEU A 235 SHEET 1 AA5 2 SER A 378 LEU A 379 0 SHEET 2 AA5 2 GLN A 405 ALA A 406 1 O GLN A 405 N LEU A 379 SHEET 1 AA6 2 CYS A 596 SER A 597 0 SHEET 2 AA6 2 GLY A 626 LEU A 627 1 O GLY A 626 N SER A 597 SHEET 1 AA7 2 ALA A 691 LEU A 692 0 SHEET 2 AA7 2 PHE A 715 VAL A 716 1 O PHE A 715 N LEU A 692 SHEET 1 AA8 2 LEU A 762 HIS A 763 0 SHEET 2 AA8 2 CYS A 790 SER A 792 1 O GLY A 791 N LEU A 762 SHEET 1 AA928 GLU B 36 GLN B 38 0 SHEET 2 AA928 LEU B 42 ASN B 44 -1 O LEU B 42 N GLN B 38 SHEET 3 AA928 SER B 67 SER B 69 1 O SER B 69 N VAL B 43 SHEET 4 AA928 LYS B 91 ASN B 93 1 O LYS B 91 N LEU B 68 SHEET 5 AA928 GLU B 127 ASN B 129 1 O GLU B 127 N LEU B 92 SHEET 6 AA928 SER B 147 ILE B 149 1 O SER B 147 N LEU B 128 SHEET 7 AA928 PHE B 171 TYR B 173 1 O PHE B 171 N LEU B 148 SHEET 8 AA928 HIS B 203 SER B 205 1 O HIS B 203 N LEU B 172 SHEET 9 AA928 TYR B 224 LEU B 226 1 O TYR B 224 N LEU B 204 SHEET 10 AA928 VAL B 248 ASP B 250 1 O VAL B 248 N LEU B 225 SHEET 11 AA928 GLY B 288 VAL B 290 1 O GLY B 288 N LEU B 249 SHEET 12 AA928 VAL B 312 ASP B 314 1 O VAL B 312 N LEU B 289 SHEET 13 AA928 ARG B 338 ASN B 340 1 O ARG B 338 N LEU B 313 SHEET 14 AA928 GLU B 368 ASP B 370 1 O ASP B 370 N LEU B 339 SHEET 15 AA928 ARG B 395 TYR B 397 1 O TYR B 397 N LEU B 369 SHEET 16 AA928 TYR B 419 ASP B 421 1 O ASP B 421 N LEU B 396 SHEET 17 AA928 THR B 476 ASP B 478 1 O ASP B 478 N ILE B 420 SHEET 18 AA928 CYS B 500 ARG B 502 1 O CYS B 500 N LEU B 477 SHEET 19 AA928 VAL B 525 ASP B 527 1 O ASP B 527 N LEU B 501 SHEET 20 AA928 ALA B 549 ASP B 551 1 O ALA B 549 N LEU B 526 SHEET 21 AA928 TYR B 579 SER B 581 1 O TYR B 579 N LEU B 550 SHEET 22 AA928 ALA B 602 ASP B 604 1 O ASP B 604 N LEU B 580 SHEET 23 AA928 ARG B 632 ASP B 634 1 O ASP B 634 N LEU B 603 SHEET 24 AA928 LEU B 657 ARG B 659 1 O ARG B 659 N LEU B 633 SHEET 25 AA928 THR B 681 ASP B 683 1 O ASP B 683 N LEU B 658 SHEET 26 AA928 ARG B 705 ASP B 707 1 O ASP B 707 N LEU B 682 SHEET 27 AA928 GLU B 729 ASN B 731 1 O ASN B 731 N LEU B 706 SHEET 28 AA928 VAL B 754 ASP B 756 1 O VAL B 754 N LEU B 730 SHEET 1 AB1 2 HIS B 77 LEU B 78 0 SHEET 2 AB1 2 THR B 113 ILE B 114 1 O THR B 113 N LEU B 78 SHEET 1 AB2 2 GLN B 157 LEU B 158 0 SHEET 2 AB2 2 GLU B 189 VAL B 190 1 O GLU B 189 N LEU B 158 SHEET 1 AB3 2 THR B 234 LEU B 235 0 SHEET 2 AB3 2 GLN B 274 LEU B 275 1 O GLN B 274 N LEU B 235 SHEET 1 AB4 2 SER B 378 LEU B 379 0 SHEET 2 AB4 2 GLN B 405 ALA B 406 1 O GLN B 405 N LEU B 379 SHEET 1 AB5 2 CYS B 596 SER B 597 0 SHEET 2 AB5 2 GLY B 626 LEU B 627 1 O GLY B 626 N SER B 597 SHEET 1 AB6 2 ALA B 691 LEU B 692 0 SHEET 2 AB6 2 PHE B 715 VAL B 716 1 O PHE B 715 N LEU B 692 SHEET 1 AB7 2 LEU B 762 HIS B 763 0 SHEET 2 AB7 2 CYS B 790 SER B 792 1 O GLY B 791 N LEU B 762 SSBOND 1 CYS A 35 CYS A 45 1555 1555 2.05 SSBOND 2 CYS A 98 CYS A 110 1555 1555 2.06 SSBOND 3 CYS A 178 CYS A 184 1555 1555 2.06 SSBOND 4 CYS A 255 CYS A 268 1555 1555 2.03 SSBOND 5 CYS A 258 CYS A 265 1555 1555 2.06 SSBOND 6 CYS A 470 CYS A 500 1555 1555 2.05 SSBOND 7 CYS A 764 CYS A 790 1555 1555 2.02 SSBOND 8 CYS B 35 CYS B 45 1555 1555 2.04 SSBOND 9 CYS B 98 CYS B 110 1555 1555 2.06 SSBOND 10 CYS B 178 CYS B 184 1555 1555 2.06 SSBOND 11 CYS B 255 CYS B 268 1555 1555 2.03 SSBOND 12 CYS B 258 CYS B 265 1555 1555 2.06 SSBOND 13 CYS B 470 CYS B 500 1555 1555 2.06 SSBOND 14 CYS B 764 CYS B 790 1555 1555 2.03 LINK ND2 ASN A 200 C1 NAG A1003 1555 1555 1.45 LINK ND2 ASN A 210 C1 NAG A1004 1555 1555 1.45 LINK ND2 ASN A 242 C1 NAG A1005 1555 1555 1.44 LINK ND2 ASN A 513 C1 NAG A1007 1555 1555 1.44 LINK ND2 ASN A 567 C1 NAG A1008 1555 1555 1.42 LINK ND2 ASN A 669 C1 NAG A1006 1555 1555 1.45 LINK ND2 ASN A 694 C1 NAG A1009 1555 1555 1.43 LINK ND2 ASN A 731 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN B 200 C1 NAG B1003 1555 1555 1.44 LINK ND2 ASN B 210 C1 NAG B1004 1555 1555 1.45 LINK ND2 ASN B 242 C1 NAG B1005 1555 1555 1.44 LINK ND2 ASN B 309 C1 NAG B1010 1555 1555 1.43 LINK ND2 ASN B 513 C1 NAG B1007 1555 1555 1.46 LINK ND2 ASN B 567 C1 NAG B1008 1555 1555 1.43 LINK ND2 ASN B 669 C1 NAG B1006 1555 1555 1.45 LINK ND2 ASN B 694 C1 NAG B1009 1555 1555 1.45 LINK ND2 ASN B 731 C1 NAG H 1 1555 1555 1.45 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.44 CISPEP 1 LEU A 33 PRO A 34 0 -1.85 CISPEP 2 PHE A 272 PRO A 273 0 -2.69 CISPEP 3 SER A 792 PRO A 793 0 -6.07 CISPEP 4 LEU B 33 PRO B 34 0 -1.76 CISPEP 5 PHE B 272 PRO B 273 0 -2.03 CISPEP 6 SER B 792 PRO B 793 0 -6.23 CRYST1 106.849 126.502 140.716 90.00 98.49 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009359 0.000000 0.001398 0.00000 SCALE2 0.000000 0.007905 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007185 0.00000