HEADER IMMUNE SYSTEM 29-JUL-17 5Y3M TITLE CRYSTAL STRUCTURE OF BOVINE TLR9 IN COMPLEX WITH TWO DNAS (CPG DNA AND TITLE 2 TCGTTT DNA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 9; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 25-817; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'-D(*TP*CP*GP*T)-3'); COMPND 8 CHAIN: E, F; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (5'-D(P*GP*GP*CP*GP*TP*T)-3'); COMPND 12 CHAIN: D, C; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 GENE: TLR9; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 15 ORGANISM_TAXID: 32630 KEYWDS INNATE IMMUNITY, TOLL-LIKE RECEPTOR, LEUCINE-RICH REPEAT, DNA KEYWDS 2 BINDING, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR U.OHTO,T.SHIMIZU REVDAT 4 22-NOV-23 5Y3M 1 HETSYN REVDAT 3 29-JUL-20 5Y3M 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 02-MAY-18 5Y3M 1 JRNL REVDAT 1 18-APR-18 5Y3M 0 JRNL AUTH U.OHTO,H.ISHIDA,T.SHIBATA,R.SATO,K.MIYAKE,T.SHIMIZU JRNL TITL TOLL-LIKE RECEPTOR 9 CONTAINS TWO DNA BINDING SITES THAT JRNL TITL 2 FUNCTION COOPERATIVELY TO PROMOTE RECEPTOR DIMERIZATION AND JRNL TITL 3 ACTIVATION JRNL REF IMMUNITY V. 48 649 2018 JRNL REFN ISSN 1097-4180 JRNL PMID 29625894 JRNL DOI 10.1016/J.IMMUNI.2018.03.013 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 59852 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3058 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4412 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3160 REMARK 3 BIN FREE R VALUE SET COUNT : 223 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11574 REMARK 3 NUCLEIC ACID ATOMS : 426 REMARK 3 HETEROGEN ATOMS : 140 REMARK 3 SOLVENT ATOMS : 134 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.46000 REMARK 3 B22 (A**2) : -1.58000 REMARK 3 B33 (A**2) : 0.86000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.55000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.611 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.281 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.244 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 24.732 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.915 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 12480 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 11400 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 17063 ; 1.269 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 26456 ; 1.010 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1465 ; 6.063 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 525 ;36.106 ;23.295 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1988 ;13.282 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 86 ;14.284 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1963 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 13390 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2530 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5875 ; 0.617 ; 2.286 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 5874 ; 0.617 ; 2.285 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7335 ; 1.146 ; 3.426 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 7336 ; 1.146 ; 3.426 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6605 ; 0.541 ; 2.389 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 6606 ; 0.541 ; 2.389 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 9729 ; 1.009 ; 3.569 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 12913 ; 2.289 ;26.167 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 12906 ; 2.271 ;26.163 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 28 801 B 28 801 46254 0.06 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 28 A 1004 REMARK 3 ORIGIN FOR THE GROUP (A): -0.4251 0.8647 40.2043 REMARK 3 T TENSOR REMARK 3 T11: 0.1256 T22: 0.0933 REMARK 3 T33: 0.1135 T12: 0.0066 REMARK 3 T13: 0.0105 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.0879 L22: 0.1117 REMARK 3 L33: 0.1382 L12: 0.0073 REMARK 3 L13: -0.0647 L23: 0.0605 REMARK 3 S TENSOR REMARK 3 S11: 0.0072 S12: 0.0079 S13: 0.0053 REMARK 3 S21: -0.0014 S22: 0.0079 S23: 0.0018 REMARK 3 S31: -0.0211 S32: -0.0065 S33: -0.0151 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 4 REMARK 3 ORIGIN FOR THE GROUP (A): -23.6331 -21.3371 39.1410 REMARK 3 T TENSOR REMARK 3 T11: 0.0770 T22: 0.1935 REMARK 3 T33: 0.1868 T12: -0.0271 REMARK 3 T13: 0.0397 T23: -0.0671 REMARK 3 L TENSOR REMARK 3 L11: 0.0463 L22: 0.7225 REMARK 3 L33: 0.1608 L12: 0.1802 REMARK 3 L13: -0.0837 L23: -0.3396 REMARK 3 S TENSOR REMARK 3 S11: 0.1041 S12: -0.0752 S13: 0.0493 REMARK 3 S21: -0.0691 S22: -0.1520 S23: 0.1629 REMARK 3 S31: 0.0399 S32: 0.1211 S33: 0.0479 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 5 REMARK 3 ORIGIN FOR THE GROUP (A): 8.2251 -26.9405 2.2486 REMARK 3 T TENSOR REMARK 3 T11: 0.1623 T22: 0.0962 REMARK 3 T33: 0.0942 T12: -0.0086 REMARK 3 T13: 0.0491 T23: 0.0375 REMARK 3 L TENSOR REMARK 3 L11: 0.9626 L22: 2.5247 REMARK 3 L33: 3.7869 L12: 0.7223 REMARK 3 L13: 1.4627 L23: -0.5972 REMARK 3 S TENSOR REMARK 3 S11: -0.0837 S12: 0.1077 S13: -0.0192 REMARK 3 S21: -0.1886 S22: 0.1487 S23: -0.0405 REMARK 3 S31: -0.1830 S32: 0.0914 S33: -0.0650 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 7 REMARK 3 ORIGIN FOR THE GROUP (A): 39.2429 -17.7383 30.8761 REMARK 3 T TENSOR REMARK 3 T11: 0.0649 T22: 0.1733 REMARK 3 T33: 0.1388 T12: 0.0587 REMARK 3 T13: 0.0219 T23: -0.0732 REMARK 3 L TENSOR REMARK 3 L11: 0.2515 L22: 3.0296 REMARK 3 L33: 1.4213 L12: -0.8697 REMARK 3 L13: 0.5963 L23: -2.0744 REMARK 3 S TENSOR REMARK 3 S11: -0.1871 S12: -0.0633 S13: 0.0863 REMARK 3 S21: 0.1949 S22: 0.0861 S23: -0.3390 REMARK 3 S31: -0.1360 S32: -0.1349 S33: 0.1011 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 7 REMARK 3 ORIGIN FOR THE GROUP (A): 6.8600 -4.2865 64.3098 REMARK 3 T TENSOR REMARK 3 T11: 0.1002 T22: 0.1083 REMARK 3 T33: 0.1714 T12: 0.0207 REMARK 3 T13: 0.0157 T23: -0.0340 REMARK 3 L TENSOR REMARK 3 L11: 0.5776 L22: 1.4752 REMARK 3 L33: 0.0942 L12: -0.2730 REMARK 3 L13: -0.1513 L23: -0.1891 REMARK 3 S TENSOR REMARK 3 S11: 0.0229 S12: -0.0243 S13: -0.0354 REMARK 3 S21: -0.0674 S22: 0.0521 S23: -0.1399 REMARK 3 S31: -0.0304 S32: -0.0187 S33: -0.0750 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 28 B 1004 REMARK 3 ORIGIN FOR THE GROUP (A): 20.2440 -33.9807 32.7103 REMARK 3 T TENSOR REMARK 3 T11: 0.1105 T22: 0.0908 REMARK 3 T33: 0.1264 T12: -0.0023 REMARK 3 T13: -0.0025 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.1073 L22: 0.0965 REMARK 3 L33: 0.1181 L12: -0.0318 REMARK 3 L13: 0.0015 L23: 0.0249 REMARK 3 S TENSOR REMARK 3 S11: -0.0104 S12: -0.0141 S13: 0.0116 REMARK 3 S21: -0.0097 S22: 0.0205 S23: -0.0148 REMARK 3 S31: 0.0304 S32: -0.0090 S33: -0.0101 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5Y3M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1300004522. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62911 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 48.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3WPE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10%(W/V) PEG 4000 0.5M NACL 0.1M MES REMARK 280 -NAOH PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 59470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, F, D, C, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 21 REMARK 465 SER A 22 REMARK 465 PRO A 23 REMARK 465 TRP A 24 REMARK 465 GLU A 25 REMARK 465 GLY A 26 REMARK 465 THR A 27 REMARK 465 ALA A 430 REMARK 465 THR A 431 REMARK 465 PRO A 432 REMARK 465 ALA A 433 REMARK 465 ALA A 434 REMARK 465 ALA A 435 REMARK 465 LEU A 436 REMARK 465 GLY A 437 REMARK 465 GLU A 438 REMARK 465 VAL A 439 REMARK 465 ASP A 440 REMARK 465 SER A 441 REMARK 465 ARG A 442 REMARK 465 VAL A 443 REMARK 465 GLU A 444 REMARK 465 VAL A 445 REMARK 465 TRP A 446 REMARK 465 ARG A 447 REMARK 465 LEU A 448 REMARK 465 PRO A 449 REMARK 465 ARG A 450 REMARK 465 GLY A 451 REMARK 465 LEU A 452 REMARK 465 ALA A 453 REMARK 465 PRO A 454 REMARK 465 GLY A 455 REMARK 465 PRO A 456 REMARK 465 LEU A 457 REMARK 465 ASP A 458 REMARK 465 ALA A 459 REMARK 465 VAL A 460 REMARK 465 SER A 461 REMARK 465 SER A 462 REMARK 465 LYS A 463 REMARK 465 ASP A 464 REMARK 465 PHE A 465 REMARK 465 GLN A 802 REMARK 465 ASP A 803 REMARK 465 LEU A 804 REMARK 465 ARG A 805 REMARK 465 LEU A 806 REMARK 465 CYS A 807 REMARK 465 LEU A 808 REMARK 465 ASP A 809 REMARK 465 GLU A 810 REMARK 465 THR A 811 REMARK 465 LEU A 812 REMARK 465 SER A 813 REMARK 465 LEU A 814 REMARK 465 ASP A 815 REMARK 465 GLU A 816 REMARK 465 PHE A 817 REMARK 465 LEU A 818 REMARK 465 VAL A 819 REMARK 465 PRO A 820 REMARK 465 ARG A 821 REMARK 465 DT E 5 REMARK 465 DT E 6 REMARK 465 DT F 6 REMARK 465 DA D 1 REMARK 465 DT D 8 REMARK 465 DT D 9 REMARK 465 DT D 10 REMARK 465 DA C 1 REMARK 465 DT C 8 REMARK 465 DT C 9 REMARK 465 DT C 10 REMARK 465 ARG B 21 REMARK 465 SER B 22 REMARK 465 PRO B 23 REMARK 465 TRP B 24 REMARK 465 GLU B 25 REMARK 465 GLY B 26 REMARK 465 THR B 27 REMARK 465 GLY B 428 REMARK 465 ALA B 429 REMARK 465 ALA B 430 REMARK 465 THR B 431 REMARK 465 PRO B 432 REMARK 465 ALA B 433 REMARK 465 ALA B 434 REMARK 465 ALA B 435 REMARK 465 LEU B 436 REMARK 465 GLY B 437 REMARK 465 GLU B 438 REMARK 465 VAL B 439 REMARK 465 ASP B 440 REMARK 465 SER B 441 REMARK 465 ARG B 442 REMARK 465 VAL B 443 REMARK 465 GLU B 444 REMARK 465 VAL B 445 REMARK 465 TRP B 446 REMARK 465 ARG B 447 REMARK 465 LEU B 448 REMARK 465 PRO B 449 REMARK 465 ARG B 450 REMARK 465 GLY B 451 REMARK 465 LEU B 452 REMARK 465 ALA B 453 REMARK 465 PRO B 454 REMARK 465 GLY B 455 REMARK 465 PRO B 456 REMARK 465 LEU B 457 REMARK 465 ASP B 458 REMARK 465 ALA B 459 REMARK 465 VAL B 460 REMARK 465 SER B 461 REMARK 465 SER B 462 REMARK 465 LYS B 463 REMARK 465 ASP B 464 REMARK 465 PHE B 465 REMARK 465 MET B 466 REMARK 465 PRO B 467 REMARK 465 CYS B 764 REMARK 465 GLY B 765 REMARK 465 ALA B 766 REMARK 465 ASP B 803 REMARK 465 LEU B 804 REMARK 465 ARG B 805 REMARK 465 LEU B 806 REMARK 465 CYS B 807 REMARK 465 LEU B 808 REMARK 465 ASP B 809 REMARK 465 GLU B 810 REMARK 465 THR B 811 REMARK 465 LEU B 812 REMARK 465 SER B 813 REMARK 465 LEU B 814 REMARK 465 ASP B 815 REMARK 465 GLU B 816 REMARK 465 PHE B 817 REMARK 465 LEU B 818 REMARK 465 VAL B 819 REMARK 465 PRO B 820 REMARK 465 ARG B 821 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 254 CA - CB - SG ANGL. DEV. = 7.2 DEGREES REMARK 500 CYS B 254 CA - CB - SG ANGL. DEV. = 7.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 55 179.14 67.66 REMARK 500 CYS A 97 63.97 -157.19 REMARK 500 VAL A 121 77.79 -114.59 REMARK 500 CYS A 177 83.83 -153.60 REMARK 500 ARG A 185 -89.73 -111.18 REMARK 500 ASN A 229 -163.34 -103.36 REMARK 500 LEU A 242 57.23 -103.52 REMARK 500 LEU A 306 60.71 -102.55 REMARK 500 ASN A 317 -166.04 -102.81 REMARK 500 SER A 361 -27.19 166.40 REMARK 500 PHE A 374 96.62 66.68 REMARK 500 ASN A 511 10.75 -143.14 REMARK 500 TYR A 534 -57.81 -148.60 REMARK 500 ASN A 553 56.61 -102.80 REMARK 500 SER A 595 133.38 -171.42 REMARK 500 LEU A 674 79.68 -106.38 REMARK 500 SER A 691 -156.35 -158.49 REMARK 500 ASN A 692 60.04 60.79 REMARK 500 ASN A 709 -161.13 -102.72 REMARK 500 ILE A 726 -54.18 -124.11 REMARK 500 ASN A 733 -168.57 -113.59 REMARK 500 GLN A 793 -29.34 97.50 REMARK 500 PHE B 55 178.28 68.41 REMARK 500 CYS B 97 64.01 -157.37 REMARK 500 VAL B 121 77.91 -114.67 REMARK 500 CYS B 177 83.89 -153.86 REMARK 500 ARG B 185 -89.16 -111.21 REMARK 500 ASN B 229 -162.83 -103.57 REMARK 500 LEU B 242 57.51 -104.20 REMARK 500 ASN B 317 -165.92 -103.09 REMARK 500 PHE B 374 96.45 66.85 REMARK 500 ASN B 424 -169.74 -119.96 REMARK 500 CYS B 469 -2.49 71.60 REMARK 500 TYR B 534 -57.65 -148.27 REMARK 500 ASN B 553 56.47 -102.60 REMARK 500 SER B 595 132.85 -171.12 REMARK 500 SER B 691 -155.10 -158.70 REMARK 500 ASN B 692 60.19 60.82 REMARK 500 ASN B 709 -161.31 -102.74 REMARK 500 ILE B 726 -54.21 -124.24 REMARK 500 ASN B 733 -168.55 -113.90 REMARK 500 GLN B 793 -30.25 97.75 REMARK 500 REMARK 500 REMARK: NULL DBREF 5Y3M A 25 817 UNP Q5I2M5 TLR9_BOVIN 25 817 DBREF 5Y3M E 1 6 PDB 5Y3M 5Y3M 1 6 DBREF 5Y3M F 1 6 PDB 5Y3M 5Y3M 1 6 DBREF 5Y3M D 1 10 PDB 5Y3M 5Y3M 1 10 DBREF 5Y3M C 1 10 PDB 5Y3M 5Y3M 1 10 DBREF 5Y3M B 25 817 UNP Q5I2M5 TLR9_BOVIN 25 817 SEQADV 5Y3M ARG A 21 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M SER A 22 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M PRO A 23 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M TRP A 24 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M GLU A 816 UNP Q5I2M5 CYS 816 CONFLICT SEQADV 5Y3M LEU A 818 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M VAL A 819 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M PRO A 820 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M ARG A 821 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M ARG B 21 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M SER B 22 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M PRO B 23 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M TRP B 24 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M GLU B 816 UNP Q5I2M5 CYS 816 CONFLICT SEQADV 5Y3M LEU B 818 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M VAL B 819 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M PRO B 820 UNP Q5I2M5 EXPRESSION TAG SEQADV 5Y3M ARG B 821 UNP Q5I2M5 EXPRESSION TAG SEQRES 1 A 801 ARG SER PRO TRP GLU GLY THR LEU PRO ALA PHE LEU PRO SEQRES 2 A 801 CYS GLU LEU GLN PRO HIS GLY GLN VAL ASP CYS ASN TRP SEQRES 3 A 801 LEU PHE LEU LYS SER VAL PRO HIS PHE SER ALA GLY ALA SEQRES 4 A 801 PRO ARG ALA ASN VAL THR SER LEU SER LEU ILE SER ASN SEQRES 5 A 801 ARG ILE HIS HIS LEU HIS ASP SER ASP PHE VAL HIS LEU SEQRES 6 A 801 SER ASN LEU ARG VAL LEU ASN LEU LYS TRP ASN CYS PRO SEQRES 7 A 801 PRO ALA GLY LEU SER PRO MET HIS PHE PRO CYS ARG MET SEQRES 8 A 801 THR ILE GLU PRO ASN THR PHE LEU ALA VAL PRO THR LEU SEQRES 9 A 801 GLU GLU LEU ASN LEU SER TYR ASN GLY ILE THR THR VAL SEQRES 10 A 801 PRO ALA LEU PRO SER SER LEU VAL SER LEU SER LEU SER SEQRES 11 A 801 HIS THR SER ILE LEU VAL LEU GLY PRO THR HIS PHE THR SEQRES 12 A 801 GLY LEU HIS ALA LEU ARG PHE LEU TYR MET ASP GLY ASN SEQRES 13 A 801 CYS TYR TYR MET ASN PRO CYS PRO ARG ALA LEU GLU VAL SEQRES 14 A 801 ALA PRO GLY ALA LEU LEU GLY LEU GLY ASN LEU THR HIS SEQRES 15 A 801 LEU SER LEU LYS TYR ASN ASN LEU THR GLU VAL PRO ARG SEQRES 16 A 801 ARG LEU PRO PRO SER LEU ASP THR LEU LEU LEU SER TYR SEQRES 17 A 801 ASN HIS ILE VAL THR LEU ALA PRO GLU ASP LEU ALA ASN SEQRES 18 A 801 LEU THR ALA LEU ARG VAL LEU ASP VAL GLY GLY ASN CYS SEQRES 19 A 801 ARG ARG CYS ASP HIS ALA ARG ASN PRO CYS ARG GLU CYS SEQRES 20 A 801 PRO LYS ASN PHE PRO LYS LEU HIS PRO ASP THR PHE SER SEQRES 21 A 801 HIS LEU SER ARG LEU GLU GLY LEU VAL LEU LYS ASP SER SEQRES 22 A 801 SER LEU TYR LYS LEU GLU LYS ASP TRP PHE ARG GLY LEU SEQRES 23 A 801 GLY ARG LEU GLN VAL LEU ASP LEU SER GLU ASN PHE LEU SEQRES 24 A 801 TYR ASP TYR ILE THR LYS THR THR ILE PHE ASN ASP LEU SEQRES 25 A 801 THR GLN LEU ARG ARG LEU ASN LEU SER PHE ASN TYR HIS SEQRES 26 A 801 LYS LYS VAL SER PHE ALA HIS LEU HIS LEU ALA SER SER SEQRES 27 A 801 PHE GLY SER LEU VAL SER LEU GLU LYS LEU ASP MET HIS SEQRES 28 A 801 GLY ILE PHE PHE ARG SER LEU THR ASN ILE THR LEU GLN SEQRES 29 A 801 SER LEU THR ARG LEU PRO LYS LEU GLN SER LEU HIS LEU SEQRES 30 A 801 GLN LEU ASN PHE ILE ASN GLN ALA GLN LEU SER ILE PHE SEQRES 31 A 801 GLY ALA PHE PRO SER LEU LEU PHE VAL ASP LEU SER ASP SEQRES 32 A 801 ASN ARG ILE SER GLY ALA ALA THR PRO ALA ALA ALA LEU SEQRES 33 A 801 GLY GLU VAL ASP SER ARG VAL GLU VAL TRP ARG LEU PRO SEQRES 34 A 801 ARG GLY LEU ALA PRO GLY PRO LEU ASP ALA VAL SER SER SEQRES 35 A 801 LYS ASP PHE MET PRO SER CYS ASN LEU ASN PHE THR LEU SEQRES 36 A 801 ASP LEU SER ARG ASN ASN LEU VAL THR ILE GLN GLN GLU SEQRES 37 A 801 MET PHE THR ARG LEU SER ARG LEU GLN CYS LEU ARG LEU SEQRES 38 A 801 SER HIS ASN SER ILE SER GLN ALA VAL ASN GLY SER GLN SEQRES 39 A 801 PHE VAL PRO LEU THR SER LEU ARG VAL LEU ASP LEU SER SEQRES 40 A 801 HIS ASN LYS LEU ASP LEU TYR HIS GLY ARG SER PHE THR SEQRES 41 A 801 GLU LEU PRO GLN LEU GLU ALA LEU ASP LEU SER TYR ASN SEQRES 42 A 801 SER GLN PRO PHE SER MET GLN GLY VAL GLY HIS ASN LEU SEQRES 43 A 801 SER PHE VAL ALA GLN LEU PRO SER LEU ARG TYR LEU SER SEQRES 44 A 801 LEU ALA HIS ASN GLY ILE HIS SER ARG VAL SER GLN LYS SEQRES 45 A 801 LEU SER SER ALA SER LEU ARG ALA LEU ASP PHE SER GLY SEQRES 46 A 801 ASN SER LEU SER GLN MET TRP ALA GLU GLY ASP LEU TYR SEQRES 47 A 801 LEU CYS PHE PHE LYS GLY LEU ARG ASN LEU VAL GLN LEU SEQRES 48 A 801 ASP LEU SER GLU ASN HIS LEU HIS THR LEU LEU PRO ARG SEQRES 49 A 801 HIS LEU ASP ASN LEU PRO LYS SER LEU ARG GLN LEU ARG SEQRES 50 A 801 LEU ARG ASP ASN ASN LEU ALA PHE PHE ASN TRP SER SER SEQRES 51 A 801 LEU THR VAL LEU PRO ARG LEU GLU ALA LEU ASP LEU ALA SEQRES 52 A 801 GLY ASN GLN LEU LYS ALA LEU SER ASN GLY SER LEU PRO SEQRES 53 A 801 PRO GLY ILE ARG LEU GLN LYS LEU ASP VAL SER SER ASN SEQRES 54 A 801 SER ILE GLY PHE VAL ILE PRO GLY PHE PHE VAL ARG ALA SEQRES 55 A 801 THR ARG LEU ILE GLU LEU ASN LEU SER ALA ASN ALA LEU SEQRES 56 A 801 LYS THR VAL ASP PRO SER TRP PHE GLY SER LEU ALA GLY SEQRES 57 A 801 THR LEU LYS ILE LEU ASP VAL SER ALA ASN PRO LEU HIS SEQRES 58 A 801 CYS ALA CYS GLY ALA ALA PHE VAL ASP PHE LEU LEU GLU SEQRES 59 A 801 ARG GLN GLU ALA VAL PRO GLY LEU SER ARG ARG VAL THR SEQRES 60 A 801 CYS GLY SER PRO GLY GLN LEU GLN GLY ARG SER ILE PHE SEQRES 61 A 801 THR GLN ASP LEU ARG LEU CYS LEU ASP GLU THR LEU SER SEQRES 62 A 801 LEU ASP GLU PHE LEU VAL PRO ARG SEQRES 1 E 6 DT DC DG DT DT DT SEQRES 1 F 6 DT DC DG DT DT DT SEQRES 1 D 10 DA DG DG DC DG DT DT DT DT DT SEQRES 1 C 10 DA DG DG DC DG DT DT DT DT DT SEQRES 1 B 801 ARG SER PRO TRP GLU GLY THR LEU PRO ALA PHE LEU PRO SEQRES 2 B 801 CYS GLU LEU GLN PRO HIS GLY GLN VAL ASP CYS ASN TRP SEQRES 3 B 801 LEU PHE LEU LYS SER VAL PRO HIS PHE SER ALA GLY ALA SEQRES 4 B 801 PRO ARG ALA ASN VAL THR SER LEU SER LEU ILE SER ASN SEQRES 5 B 801 ARG ILE HIS HIS LEU HIS ASP SER ASP PHE VAL HIS LEU SEQRES 6 B 801 SER ASN LEU ARG VAL LEU ASN LEU LYS TRP ASN CYS PRO SEQRES 7 B 801 PRO ALA GLY LEU SER PRO MET HIS PHE PRO CYS ARG MET SEQRES 8 B 801 THR ILE GLU PRO ASN THR PHE LEU ALA VAL PRO THR LEU SEQRES 9 B 801 GLU GLU LEU ASN LEU SER TYR ASN GLY ILE THR THR VAL SEQRES 10 B 801 PRO ALA LEU PRO SER SER LEU VAL SER LEU SER LEU SER SEQRES 11 B 801 HIS THR SER ILE LEU VAL LEU GLY PRO THR HIS PHE THR SEQRES 12 B 801 GLY LEU HIS ALA LEU ARG PHE LEU TYR MET ASP GLY ASN SEQRES 13 B 801 CYS TYR TYR MET ASN PRO CYS PRO ARG ALA LEU GLU VAL SEQRES 14 B 801 ALA PRO GLY ALA LEU LEU GLY LEU GLY ASN LEU THR HIS SEQRES 15 B 801 LEU SER LEU LYS TYR ASN ASN LEU THR GLU VAL PRO ARG SEQRES 16 B 801 ARG LEU PRO PRO SER LEU ASP THR LEU LEU LEU SER TYR SEQRES 17 B 801 ASN HIS ILE VAL THR LEU ALA PRO GLU ASP LEU ALA ASN SEQRES 18 B 801 LEU THR ALA LEU ARG VAL LEU ASP VAL GLY GLY ASN CYS SEQRES 19 B 801 ARG ARG CYS ASP HIS ALA ARG ASN PRO CYS ARG GLU CYS SEQRES 20 B 801 PRO LYS ASN PHE PRO LYS LEU HIS PRO ASP THR PHE SER SEQRES 21 B 801 HIS LEU SER ARG LEU GLU GLY LEU VAL LEU LYS ASP SER SEQRES 22 B 801 SER LEU TYR LYS LEU GLU LYS ASP TRP PHE ARG GLY LEU SEQRES 23 B 801 GLY ARG LEU GLN VAL LEU ASP LEU SER GLU ASN PHE LEU SEQRES 24 B 801 TYR ASP TYR ILE THR LYS THR THR ILE PHE ASN ASP LEU SEQRES 25 B 801 THR GLN LEU ARG ARG LEU ASN LEU SER PHE ASN TYR HIS SEQRES 26 B 801 LYS LYS VAL SER PHE ALA HIS LEU HIS LEU ALA SER SER SEQRES 27 B 801 PHE GLY SER LEU VAL SER LEU GLU LYS LEU ASP MET HIS SEQRES 28 B 801 GLY ILE PHE PHE ARG SER LEU THR ASN ILE THR LEU GLN SEQRES 29 B 801 SER LEU THR ARG LEU PRO LYS LEU GLN SER LEU HIS LEU SEQRES 30 B 801 GLN LEU ASN PHE ILE ASN GLN ALA GLN LEU SER ILE PHE SEQRES 31 B 801 GLY ALA PHE PRO SER LEU LEU PHE VAL ASP LEU SER ASP SEQRES 32 B 801 ASN ARG ILE SER GLY ALA ALA THR PRO ALA ALA ALA LEU SEQRES 33 B 801 GLY GLU VAL ASP SER ARG VAL GLU VAL TRP ARG LEU PRO SEQRES 34 B 801 ARG GLY LEU ALA PRO GLY PRO LEU ASP ALA VAL SER SER SEQRES 35 B 801 LYS ASP PHE MET PRO SER CYS ASN LEU ASN PHE THR LEU SEQRES 36 B 801 ASP LEU SER ARG ASN ASN LEU VAL THR ILE GLN GLN GLU SEQRES 37 B 801 MET PHE THR ARG LEU SER ARG LEU GLN CYS LEU ARG LEU SEQRES 38 B 801 SER HIS ASN SER ILE SER GLN ALA VAL ASN GLY SER GLN SEQRES 39 B 801 PHE VAL PRO LEU THR SER LEU ARG VAL LEU ASP LEU SER SEQRES 40 B 801 HIS ASN LYS LEU ASP LEU TYR HIS GLY ARG SER PHE THR SEQRES 41 B 801 GLU LEU PRO GLN LEU GLU ALA LEU ASP LEU SER TYR ASN SEQRES 42 B 801 SER GLN PRO PHE SER MET GLN GLY VAL GLY HIS ASN LEU SEQRES 43 B 801 SER PHE VAL ALA GLN LEU PRO SER LEU ARG TYR LEU SER SEQRES 44 B 801 LEU ALA HIS ASN GLY ILE HIS SER ARG VAL SER GLN LYS SEQRES 45 B 801 LEU SER SER ALA SER LEU ARG ALA LEU ASP PHE SER GLY SEQRES 46 B 801 ASN SER LEU SER GLN MET TRP ALA GLU GLY ASP LEU TYR SEQRES 47 B 801 LEU CYS PHE PHE LYS GLY LEU ARG ASN LEU VAL GLN LEU SEQRES 48 B 801 ASP LEU SER GLU ASN HIS LEU HIS THR LEU LEU PRO ARG SEQRES 49 B 801 HIS LEU ASP ASN LEU PRO LYS SER LEU ARG GLN LEU ARG SEQRES 50 B 801 LEU ARG ASP ASN ASN LEU ALA PHE PHE ASN TRP SER SER SEQRES 51 B 801 LEU THR VAL LEU PRO ARG LEU GLU ALA LEU ASP LEU ALA SEQRES 52 B 801 GLY ASN GLN LEU LYS ALA LEU SER ASN GLY SER LEU PRO SEQRES 53 B 801 PRO GLY ILE ARG LEU GLN LYS LEU ASP VAL SER SER ASN SEQRES 54 B 801 SER ILE GLY PHE VAL ILE PRO GLY PHE PHE VAL ARG ALA SEQRES 55 B 801 THR ARG LEU ILE GLU LEU ASN LEU SER ALA ASN ALA LEU SEQRES 56 B 801 LYS THR VAL ASP PRO SER TRP PHE GLY SER LEU ALA GLY SEQRES 57 B 801 THR LEU LYS ILE LEU ASP VAL SER ALA ASN PRO LEU HIS SEQRES 58 B 801 CYS ALA CYS GLY ALA ALA PHE VAL ASP PHE LEU LEU GLU SEQRES 59 B 801 ARG GLN GLU ALA VAL PRO GLY LEU SER ARG ARG VAL THR SEQRES 60 B 801 CYS GLY SER PRO GLY GLN LEU GLN GLY ARG SER ILE PHE SEQRES 61 B 801 THR GLN ASP LEU ARG LEU CYS LEU ASP GLU THR LEU SER SEQRES 62 B 801 LEU ASP GLU PHE LEU VAL PRO ARG HET NAG A1000 14 HET NAG A1001 14 HET NAG A1002 14 HET NAG A1003 14 HET NAG A1004 14 HET NAG B1000 14 HET NAG B1001 14 HET NAG B1002 14 HET NAG B1003 14 HET NAG B1004 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 7 NAG 10(C8 H15 N O6) FORMUL 17 HOH *134(H2 O) HELIX 1 AA1 PRO A 60 VAL A 64 5 5 HELIX 2 AA2 GLY A 158 THR A 163 5 6 HELIX 3 AA3 ALA A 235 ALA A 240 5 6 HELIX 4 AA4 GLU A 299 ARG A 304 5 6 HELIX 5 AA5 ASP A 321 THR A 326 1 6 HELIX 6 AA6 THR A 327 LEU A 332 5 6 HELIX 7 AA7 ALA A 356 GLY A 360 5 5 HELIX 8 AA8 LEU A 383 THR A 387 5 5 HELIX 9 AA9 LEU A 407 PHE A 413 5 7 HELIX 10 AB1 GLN A 486 THR A 491 5 6 HELIX 11 AB2 SER A 554 MET A 559 5 6 HELIX 12 AB3 LEU A 566 LEU A 572 5 7 HELIX 13 AB4 SER A 607 ALA A 613 1 7 HELIX 14 AB5 LEU A 642 ASN A 648 1 7 HELIX 15 AB6 ASN A 667 LEU A 674 5 8 HELIX 16 AB7 ASP A 739 GLY A 744 5 6 HELIX 17 AB8 SER A 745 LEU A 750 1 6 HELIX 18 AB9 ALA A 767 ARG A 775 1 9 HELIX 19 AC1 GLN A 776 VAL A 779 5 4 HELIX 20 AC2 PRO B 60 VAL B 64 5 5 HELIX 21 AC3 GLY B 158 THR B 163 5 6 HELIX 22 AC4 ALA B 235 ALA B 240 5 6 HELIX 23 AC5 GLU B 299 ARG B 304 5 6 HELIX 24 AC6 ASP B 321 THR B 326 1 6 HELIX 25 AC7 THR B 327 LEU B 332 5 6 HELIX 26 AC8 ALA B 356 LEU B 362 5 7 HELIX 27 AC9 LEU B 383 THR B 387 5 5 HELIX 28 AD1 LEU B 407 PHE B 413 5 7 HELIX 29 AD2 GLN B 486 THR B 491 5 6 HELIX 30 AD3 GLN B 555 MET B 559 5 5 HELIX 31 AD4 LEU B 566 LEU B 572 5 7 HELIX 32 AD5 SER B 607 ALA B 613 1 7 HELIX 33 AD6 LEU B 642 ASN B 648 1 7 HELIX 34 AD7 ASN B 667 LEU B 674 5 8 HELIX 35 AD8 ASP B 739 GLY B 744 5 6 HELIX 36 AD9 SER B 745 LEU B 750 1 6 HELIX 37 AE1 PHE B 768 ARG B 775 1 8 HELIX 38 AE2 GLN B 776 VAL B 779 5 4 SHEET 1 AA128 GLU A 35 GLN A 37 0 SHEET 2 AA128 GLN A 41 ASP A 43 -1 O GLN A 41 N GLN A 37 SHEET 3 AA128 SER A 66 SER A 68 1 O SER A 66 N VAL A 42 SHEET 4 AA128 VAL A 90 ASN A 92 1 O ASN A 92 N LEU A 67 SHEET 5 AA128 GLU A 126 ASN A 128 1 O GLU A 126 N LEU A 91 SHEET 6 AA128 SER A 146 SER A 148 1 O SER A 146 N LEU A 127 SHEET 7 AA128 PHE A 170 TYR A 172 1 O TYR A 172 N LEU A 147 SHEET 8 AA128 HIS A 202 SER A 204 1 O HIS A 202 N LEU A 171 SHEET 9 AA128 THR A 223 LEU A 225 1 O THR A 223 N LEU A 203 SHEET 10 AA128 VAL A 247 ASP A 249 1 O ASP A 249 N LEU A 224 SHEET 11 AA128 GLY A 287 VAL A 289 1 O VAL A 289 N LEU A 248 SHEET 12 AA128 VAL A 311 ASP A 313 1 O ASP A 313 N LEU A 288 SHEET 13 AA128 ARG A 337 ASN A 339 1 O ARG A 337 N LEU A 312 SHEET 14 AA128 LYS A 367 ASP A 369 1 O ASP A 369 N LEU A 338 SHEET 15 AA128 SER A 394 HIS A 396 1 O HIS A 396 N LEU A 368 SHEET 16 AA128 PHE A 418 ASP A 420 1 O ASP A 420 N LEU A 395 SHEET 17 AA128 THR A 474 ASP A 476 1 O ASP A 476 N VAL A 419 SHEET 18 AA128 CYS A 498 ARG A 500 1 O ARG A 500 N LEU A 475 SHEET 19 AA128 VAL A 523 ASP A 525 1 O ASP A 525 N LEU A 499 SHEET 20 AA128 ALA A 547 ASP A 549 1 O ALA A 547 N LEU A 524 SHEET 21 AA128 TYR A 577 SER A 579 1 O TYR A 577 N LEU A 548 SHEET 22 AA128 ALA A 600 ASP A 602 1 O ASP A 602 N LEU A 578 SHEET 23 AA128 GLN A 630 ASP A 632 1 O ASP A 632 N LEU A 601 SHEET 24 AA128 GLN A 655 ARG A 657 1 O ARG A 657 N LEU A 631 SHEET 25 AA128 ALA A 679 ASP A 681 1 O ALA A 679 N LEU A 656 SHEET 26 AA128 LYS A 703 ASP A 705 1 O ASP A 705 N LEU A 680 SHEET 27 AA128 GLU A 727 ASN A 729 1 O ASN A 729 N LEU A 704 SHEET 28 AA128 ILE A 752 ASP A 754 1 O ASP A 754 N LEU A 728 SHEET 1 AA2 2 HIS A 76 LEU A 77 0 SHEET 2 AA2 2 THR A 112 ILE A 113 1 O THR A 112 N LEU A 77 SHEET 1 AA3 2 VAL A 156 LEU A 157 0 SHEET 2 AA3 2 GLU A 188 VAL A 189 1 O GLU A 188 N LEU A 157 SHEET 1 AA4 2 THR A 233 LEU A 234 0 SHEET 2 AA4 2 LYS A 273 LEU A 274 1 O LYS A 273 N LEU A 234 SHEET 1 AA5 2 SER A 377 LEU A 378 0 SHEET 2 AA5 2 GLN A 404 ALA A 405 1 O GLN A 404 N LEU A 378 SHEET 1 AA6 2 SER A 594 SER A 595 0 SHEET 2 AA6 2 GLY A 624 LEU A 625 1 O GLY A 624 N SER A 595 SHEET 1 AA7 2 ALA A 689 LEU A 690 0 SHEET 2 AA7 2 PHE A 713 VAL A 714 1 O PHE A 713 N LEU A 690 SHEET 1 AA8 2 LEU A 760 HIS A 761 0 SHEET 2 AA8 2 CYS A 788 SER A 790 1 O GLY A 789 N LEU A 760 SHEET 1 AA928 GLU B 35 GLN B 37 0 SHEET 2 AA928 GLN B 41 ASP B 43 -1 O GLN B 41 N GLN B 37 SHEET 3 AA928 SER B 66 SER B 68 1 O SER B 66 N VAL B 42 SHEET 4 AA928 VAL B 90 ASN B 92 1 O ASN B 92 N LEU B 67 SHEET 5 AA928 GLU B 126 ASN B 128 1 O GLU B 126 N LEU B 91 SHEET 6 AA928 SER B 146 SER B 148 1 O SER B 146 N LEU B 127 SHEET 7 AA928 PHE B 170 TYR B 172 1 O TYR B 172 N LEU B 147 SHEET 8 AA928 HIS B 202 SER B 204 1 O HIS B 202 N LEU B 171 SHEET 9 AA928 THR B 223 LEU B 225 1 O THR B 223 N LEU B 203 SHEET 10 AA928 VAL B 247 ASP B 249 1 O ASP B 249 N LEU B 224 SHEET 11 AA928 GLY B 287 VAL B 289 1 O VAL B 289 N LEU B 248 SHEET 12 AA928 VAL B 311 ASP B 313 1 O ASP B 313 N LEU B 288 SHEET 13 AA928 ARG B 337 ASN B 339 1 O ARG B 337 N LEU B 312 SHEET 14 AA928 LYS B 367 ASP B 369 1 O ASP B 369 N LEU B 338 SHEET 15 AA928 SER B 394 HIS B 396 1 O HIS B 396 N LEU B 368 SHEET 16 AA928 PHE B 418 ASP B 420 1 O ASP B 420 N LEU B 395 SHEET 17 AA928 THR B 474 ASP B 476 1 O ASP B 476 N VAL B 419 SHEET 18 AA928 CYS B 498 ARG B 500 1 O ARG B 500 N LEU B 475 SHEET 19 AA928 VAL B 523 ASP B 525 1 O ASP B 525 N LEU B 499 SHEET 20 AA928 ALA B 547 ASP B 549 1 O ALA B 547 N LEU B 524 SHEET 21 AA928 TYR B 577 SER B 579 1 O TYR B 577 N LEU B 548 SHEET 22 AA928 ALA B 600 ASP B 602 1 O ASP B 602 N LEU B 578 SHEET 23 AA928 GLN B 630 ASP B 632 1 O ASP B 632 N LEU B 601 SHEET 24 AA928 GLN B 655 ARG B 657 1 O ARG B 657 N LEU B 631 SHEET 25 AA928 ALA B 679 ASP B 681 1 O ALA B 679 N LEU B 656 SHEET 26 AA928 LYS B 703 ASP B 705 1 O ASP B 705 N LEU B 680 SHEET 27 AA928 GLU B 727 ASN B 729 1 O ASN B 729 N LEU B 704 SHEET 28 AA928 ILE B 752 ASP B 754 1 O ASP B 754 N LEU B 728 SHEET 1 AB1 2 HIS B 76 LEU B 77 0 SHEET 2 AB1 2 THR B 112 ILE B 113 1 O THR B 112 N LEU B 77 SHEET 1 AB2 2 VAL B 156 LEU B 157 0 SHEET 2 AB2 2 GLU B 188 VAL B 189 1 O GLU B 188 N LEU B 157 SHEET 1 AB3 2 THR B 233 LEU B 234 0 SHEET 2 AB3 2 LYS B 273 LEU B 274 1 O LYS B 273 N LEU B 234 SHEET 1 AB4 2 SER B 377 LEU B 378 0 SHEET 2 AB4 2 GLN B 404 ALA B 405 1 O GLN B 404 N LEU B 378 SHEET 1 AB5 2 SER B 594 SER B 595 0 SHEET 2 AB5 2 GLY B 624 LEU B 625 1 O GLY B 624 N SER B 595 SHEET 1 AB6 2 ALA B 689 LEU B 690 0 SHEET 2 AB6 2 PHE B 713 VAL B 714 1 O PHE B 713 N LEU B 690 SHEET 1 AB7 2 LEU B 760 HIS B 761 0 SHEET 2 AB7 2 CYS B 788 SER B 790 1 O GLY B 789 N LEU B 760 SSBOND 1 CYS A 34 CYS A 44 1555 1555 2.05 SSBOND 2 CYS A 97 CYS A 109 1555 1555 2.04 SSBOND 3 CYS A 177 CYS A 183 1555 1555 2.05 SSBOND 4 CYS A 254 CYS A 267 1555 1555 2.03 SSBOND 5 CYS A 257 CYS A 264 1555 1555 2.04 SSBOND 6 CYS A 469 CYS A 498 1555 1555 2.04 SSBOND 7 CYS A 762 CYS A 788 1555 1555 2.03 SSBOND 8 CYS B 34 CYS B 44 1555 1555 2.03 SSBOND 9 CYS B 97 CYS B 109 1555 1555 2.03 SSBOND 10 CYS B 177 CYS B 183 1555 1555 2.06 SSBOND 11 CYS B 254 CYS B 267 1555 1555 2.05 SSBOND 12 CYS B 257 CYS B 264 1555 1555 2.04 SSBOND 13 CYS B 469 CYS B 498 1555 1555 2.02 SSBOND 14 CYS B 762 CYS B 788 1555 1555 2.03 LINK ND2 ASN A 209 C1 NAG A1000 1555 1555 1.45 LINK ND2 ASN A 472 C1 NAG A1002 1555 1555 1.44 LINK ND2 ASN A 511 C1 NAG A1003 1555 1555 1.44 LINK ND2 ASN A 565 C1 NAG A1001 1555 1555 1.44 LINK ND2 ASN A 729 C1 NAG A1004 1555 1555 1.46 LINK ND2 ASN B 209 C1 NAG B1000 1555 1555 1.45 LINK ND2 ASN B 380 C1 NAG B1001 1555 1555 1.44 LINK ND2 ASN B 511 C1 NAG B1004 1555 1555 1.44 LINK ND2 ASN B 565 C1 NAG B1003 1555 1555 1.44 LINK ND2 ASN B 667 C1 NAG B1002 1555 1555 1.44 CISPEP 1 LEU A 32 PRO A 33 0 4.40 CISPEP 2 PHE A 271 PRO A 272 0 -3.35 CISPEP 3 SER A 790 PRO A 791 0 -5.80 CISPEP 4 LEU B 32 PRO B 33 0 4.32 CISPEP 5 PHE B 271 PRO B 272 0 -3.18 CISPEP 6 SER B 790 PRO B 791 0 -6.26 CRYST1 88.177 68.693 153.535 90.00 100.64 90.00 P 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011341 0.000000 0.002131 0.00000 SCALE2 0.000000 0.014558 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006627 0.00000