HEADER OXIDOREDUCTASE 21-AUG-17 5Y8N TITLE MYCOBACTERIUM TUBERCULOSIS 3-HYDROXYISOBUTYRATE DEHYDROGENASE TITLE 2 (MTHIBADH) + NAD + L-SERINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE 3-HYDROXYISOBUTYRATE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HIBADH; COMPND 5 EC: 1.1.1.31; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 GENE: MMSB, RV0751C, MTV041.25C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS 3-HYDROXY ACID DEHYDROGENASE, ENZYME SUBSTRATE INTERACTIONS, KEYWDS 2 MECHANISM OF ENZYME ACTION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.SRIKALAIVANI,A.SINGH,A.SUROLIA,M.VIJAYAN REVDAT 3 22-NOV-23 5Y8N 1 REMARK REVDAT 2 29-AUG-18 5Y8N 1 JRNL REVDAT 1 11-JUL-18 5Y8N 0 JRNL AUTH R.SRIKALAIVANI,A.SINGH,M.VIJAYAN,A.SUROLIA JRNL TITL STRUCTURE, INTERACTIONS AND ACTION OFMYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS3-HYDROXYISOBUTYRIC ACID DEHYDROGENASE. JRNL REF BIOCHEM. J. V. 475 2457 2018 JRNL REFN ESSN 1470-8728 JRNL PMID 29959185 JRNL DOI 10.1042/BCJ20180271 REMARK 2 REMARK 2 RESOLUTION. 2.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0151 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 111.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 17349 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 937 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.68 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1205 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.3580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4076 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 141 REMARK 3 SOLVENT ATOMS : 285 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.66000 REMARK 3 B22 (A**2) : -0.66000 REMARK 3 B33 (A**2) : 2.14000 REMARK 3 B12 (A**2) : -0.33000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.339 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.243 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.346 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.873 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4304 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4078 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5886 ; 1.328 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9341 ; 0.952 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 581 ; 5.563 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 140 ;37.783 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 579 ;14.255 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;13.610 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 709 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4954 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 929 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2340 ; 1.147 ; 2.183 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2337 ; 1.135 ; 2.179 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2915 ; 1.895 ; 3.253 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2915 ; 1.890 ; 3.253 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1964 ; 1.474 ; 2.387 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1965 ; 1.474 ; 2.389 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2972 ; 2.446 ; 3.508 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 20442 ; 6.474 ;42.185 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 20359 ; 6.454 ;42.218 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5Y8N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1300004745. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18305 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.680 REMARK 200 RESOLUTION RANGE LOW (A) : 111.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 10.10 REMARK 200 R MERGE (I) : 0.20000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.27600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3OBB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.02M MGCL2.6H2O, 0.1M HEPES PH 7.5, REMARK 280 22% W/V POLYACRYLIC ACID SODIUM SALT 5100, MICROBATCH, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.95333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.47667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.21500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 11.73833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.69167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 ALA A 292 REMARK 465 ASP A 293 REMARK 465 ALA A 294 REMARK 465 ARG B 291 REMARK 465 ALA B 292 REMARK 465 ASP B 293 REMARK 465 ALA B 294 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 69 CD OE1 OE2 REMARK 470 ARG A 72 CD NE CZ NH1 NH2 REMARK 470 LYS A 123 CD CE NZ REMARK 470 LYS A 154 CE NZ REMARK 470 LYS A 233 CE NZ REMARK 470 ARG A 291 CG CD NE CZ NH1 NH2 REMARK 470 MET B 0 CG SD CE REMARK 470 LYS B 123 NZ REMARK 470 GLU B 138 CG CD OE1 OE2 REMARK 470 LYS B 233 CD CE NZ REMARK 470 ALA B 290 CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 116 61.69 -151.62 REMARK 500 ASN A 230 48.33 -144.85 REMARK 500 MET B 1 -79.61 -91.37 REMARK 500 ALA B 116 58.91 -140.73 REMARK 500 ALA B 206 -168.83 -127.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SER A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SER A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AKR A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9ON A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SER B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AKR B 303 DBREF 5Y8N A 1 294 UNP P9WNY5 MMSB_MYCTU 1 294 DBREF 5Y8N B 1 294 UNP P9WNY5 MMSB_MYCTU 1 294 SEQADV 5Y8N MET A 0 UNP P9WNY5 EXPRESSION TAG SEQADV 5Y8N MET B 0 UNP P9WNY5 EXPRESSION TAG SEQRES 1 A 295 MET MET THR THR ILE ALA PHE LEU GLY LEU GLY ASN MET SEQRES 2 A 295 GLY ALA PRO MET SER ALA ASN LEU VAL GLY ALA GLY HIS SEQRES 3 A 295 VAL VAL ARG GLY PHE ASP PRO ALA PRO THR ALA ALA SER SEQRES 4 A 295 GLY ALA ALA ALA HIS GLY VAL ALA VAL PHE ARG SER ALA SEQRES 5 A 295 PRO GLU ALA VAL ALA GLU ALA ASP VAL VAL ILE THR MET SEQRES 6 A 295 LEU PRO THR GLY GLU VAL VAL ARG ARG CYS TYR THR ASP SEQRES 7 A 295 VAL LEU ALA ALA ALA ARG PRO ALA THR LEU PHE ILE ASP SEQRES 8 A 295 SER SER THR ILE SER VAL THR ASP ALA ARG GLU VAL HIS SEQRES 9 A 295 ALA LEU ALA GLU SER HIS GLY MET LEU GLN LEU ASP ALA SEQRES 10 A 295 PRO VAL SER GLY GLY VAL LYS GLY ALA ALA ALA ALA THR SEQRES 11 A 295 LEU ALA PHE MET VAL GLY GLY ASP GLU SER THR LEU ARG SEQRES 12 A 295 ARG ALA ARG PRO VAL LEU GLU PRO MET ALA GLY LYS ILE SEQRES 13 A 295 ILE HIS CYS GLY ALA ALA GLY ALA GLY GLN ALA ALA LYS SEQRES 14 A 295 VAL CYS ASN ASN MET VAL LEU ALA VAL GLN GLN ILE ALA SEQRES 15 A 295 ILE ALA GLU ALA PHE VAL LEU ALA GLU LYS LEU GLY LEU SEQRES 16 A 295 SER ALA GLN SER LEU PHE ASP VAL ILE THR GLY ALA THR SEQRES 17 A 295 GLY ASN CYS TRP ALA VAL HIS THR ASN CYS PRO VAL PRO SEQRES 18 A 295 GLY PRO VAL PRO THR SER PRO ALA ASN ASN ASP PHE LYS SEQRES 19 A 295 PRO GLY PHE SER THR ALA LEU MET ASN LYS ASP LEU GLY SEQRES 20 A 295 LEU ALA MET ASP ALA VAL ALA ALA THR GLY ALA THR ALA SEQRES 21 A 295 PRO LEU GLY SER HIS ALA ALA ASP ILE TYR ALA LYS PHE SEQRES 22 A 295 ALA ALA ASP HIS ALA ASP LEU ASP PHE SER ALA VAL ILE SEQRES 23 A 295 HIS THR LEU ARG ALA ARG ALA ASP ALA SEQRES 1 B 295 MET MET THR THR ILE ALA PHE LEU GLY LEU GLY ASN MET SEQRES 2 B 295 GLY ALA PRO MET SER ALA ASN LEU VAL GLY ALA GLY HIS SEQRES 3 B 295 VAL VAL ARG GLY PHE ASP PRO ALA PRO THR ALA ALA SER SEQRES 4 B 295 GLY ALA ALA ALA HIS GLY VAL ALA VAL PHE ARG SER ALA SEQRES 5 B 295 PRO GLU ALA VAL ALA GLU ALA ASP VAL VAL ILE THR MET SEQRES 6 B 295 LEU PRO THR GLY GLU VAL VAL ARG ARG CYS TYR THR ASP SEQRES 7 B 295 VAL LEU ALA ALA ALA ARG PRO ALA THR LEU PHE ILE ASP SEQRES 8 B 295 SER SER THR ILE SER VAL THR ASP ALA ARG GLU VAL HIS SEQRES 9 B 295 ALA LEU ALA GLU SER HIS GLY MET LEU GLN LEU ASP ALA SEQRES 10 B 295 PRO VAL SER GLY GLY VAL LYS GLY ALA ALA ALA ALA THR SEQRES 11 B 295 LEU ALA PHE MET VAL GLY GLY ASP GLU SER THR LEU ARG SEQRES 12 B 295 ARG ALA ARG PRO VAL LEU GLU PRO MET ALA GLY LYS ILE SEQRES 13 B 295 ILE HIS CYS GLY ALA ALA GLY ALA GLY GLN ALA ALA LYS SEQRES 14 B 295 VAL CYS ASN ASN MET VAL LEU ALA VAL GLN GLN ILE ALA SEQRES 15 B 295 ILE ALA GLU ALA PHE VAL LEU ALA GLU LYS LEU GLY LEU SEQRES 16 B 295 SER ALA GLN SER LEU PHE ASP VAL ILE THR GLY ALA THR SEQRES 17 B 295 GLY ASN CYS TRP ALA VAL HIS THR ASN CYS PRO VAL PRO SEQRES 18 B 295 GLY PRO VAL PRO THR SER PRO ALA ASN ASN ASP PHE LYS SEQRES 19 B 295 PRO GLY PHE SER THR ALA LEU MET ASN LYS ASP LEU GLY SEQRES 20 B 295 LEU ALA MET ASP ALA VAL ALA ALA THR GLY ALA THR ALA SEQRES 21 B 295 PRO LEU GLY SER HIS ALA ALA ASP ILE TYR ALA LYS PHE SEQRES 22 B 295 ALA ALA ASP HIS ALA ASP LEU ASP PHE SER ALA VAL ILE SEQRES 23 B 295 HIS THR LEU ARG ALA ARG ALA ASP ALA HET NAD A 301 44 HET SER A 302 7 HET SER A 303 7 HET GOL A 304 6 HET GOL A 305 6 HET AKR A 306 5 HET 9ON A 307 10 HET NAD B 301 44 HET SER B 302 7 HET AKR B 303 5 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM SER SERINE HETNAM GOL GLYCEROL HETNAM AKR ACRYLIC ACID HETNAM 9ON (2~{S})-2-METHYLPENTANEDIOIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 SER 3(C3 H7 N O3) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 AKR 2(C3 H4 O2) FORMUL 9 9ON C6 H10 O4 FORMUL 13 HOH *285(H2 O) HELIX 1 AA1 MET A 12 ALA A 23 1 12 HELIX 2 AA2 ALA A 33 HIS A 43 1 11 HELIX 3 AA3 SER A 50 ALA A 56 1 7 HELIX 4 AA4 THR A 67 LEU A 79 1 13 HELIX 5 AA5 SER A 95 HIS A 109 1 15 HELIX 6 AA6 GLY A 120 ALA A 128 1 9 HELIX 7 AA7 ASP A 137 GLU A 149 1 13 HELIX 8 AA8 GLY A 162 LEU A 192 1 31 HELIX 9 AA9 SER A 195 GLY A 205 1 11 HELIX 10 AB1 CYS A 210 THR A 215 1 6 HELIX 11 AB2 SER A 226 ASN A 230 5 5 HELIX 12 AB3 SER A 237 GLY A 256 1 20 HELIX 13 AB4 ALA A 259 ALA A 277 1 19 HELIX 14 AB5 ASP A 280 ARG A 291 5 12 HELIX 15 AB6 MET B 12 ALA B 23 1 12 HELIX 16 AB7 ALA B 33 HIS B 43 1 11 HELIX 17 AB8 SER B 50 GLU B 57 1 8 HELIX 18 AB9 THR B 67 LEU B 79 1 13 HELIX 19 AC1 SER B 95 HIS B 109 1 15 HELIX 20 AC2 GLY B 120 ALA B 127 1 8 HELIX 21 AC3 ASP B 137 GLU B 149 1 13 HELIX 22 AC4 GLY B 162 GLY B 193 1 32 HELIX 23 AC5 SER B 195 GLY B 205 1 11 HELIX 24 AC6 CYS B 210 THR B 215 1 6 HELIX 25 AC7 SER B 226 ASP B 231 5 6 HELIX 26 AC8 SER B 237 GLY B 256 1 20 HELIX 27 AC9 ALA B 259 ALA B 277 1 19 HELIX 28 AD1 ASP B 280 ARG B 289 5 10 SHEET 1 AA1 6 ALA A 46 VAL A 47 0 SHEET 2 AA1 6 VAL A 26 PHE A 30 1 N GLY A 29 O ALA A 46 SHEET 3 AA1 6 THR A 3 LEU A 7 1 N ILE A 4 O VAL A 26 SHEET 4 AA1 6 VAL A 60 THR A 63 1 O ILE A 62 N LEU A 7 SHEET 5 AA1 6 LEU A 87 ASP A 90 1 O LEU A 87 N VAL A 61 SHEET 6 AA1 6 LEU A 112 ASP A 115 1 O LEU A 112 N PHE A 88 SHEET 1 AA2 3 VAL A 118 SER A 119 0 SHEET 2 AA2 3 LEU A 130 GLY A 135 -1 O ALA A 131 N SER A 119 SHEET 3 AA2 3 ALA A 152 GLY A 159 1 O ILE A 156 N VAL A 134 SHEET 1 AA3 6 ALA B 46 VAL B 47 0 SHEET 2 AA3 6 VAL B 26 PHE B 30 1 N VAL B 27 O ALA B 46 SHEET 3 AA3 6 THR B 3 LEU B 7 1 N ILE B 4 O VAL B 26 SHEET 4 AA3 6 VAL B 60 THR B 63 1 O ILE B 62 N LEU B 7 SHEET 5 AA3 6 LEU B 87 ASP B 90 1 O LEU B 87 N VAL B 61 SHEET 6 AA3 6 LEU B 112 ASP B 115 1 O LEU B 112 N PHE B 88 SHEET 1 AA4 3 VAL B 118 SER B 119 0 SHEET 2 AA4 3 LEU B 130 GLY B 135 -1 O ALA B 131 N SER B 119 SHEET 3 AA4 3 ALA B 152 GLY B 159 1 O CYS B 158 N VAL B 134 CISPEP 1 PRO A 234 GLY A 235 0 3.63 CISPEP 2 PRO B 234 GLY B 235 0 -0.56 SITE 1 AC1 24 GLY A 8 GLY A 10 ASN A 11 MET A 12 SITE 2 AC1 24 PHE A 30 ASP A 31 PRO A 32 MET A 64 SITE 3 AC1 24 LEU A 65 PRO A 66 VAL A 70 THR A 93 SITE 4 AC1 24 VAL A 118 GLY A 121 LYS A 168 LEU A 240 SITE 5 AC1 24 LYS A 243 SER A 302 HOH A 401 HOH A 402 SITE 6 AC1 24 HOH A 406 HOH A 450 HOH A 485 GLY B 22 SITE 1 AC2 8 SER A 119 GLY A 120 LYS A 168 ASN A 172 SITE 2 AC2 8 PHE A 236 ASP A 244 NAD A 301 SER A 303 SITE 1 AC3 2 SER A 302 THR B 207 SITE 1 AC4 5 ALA A 58 ASP A 59 ARG A 83 PRO A 84 SITE 2 AC4 5 THR A 86 SITE 1 AC5 7 HIS A 25 VAL A 26 VAL A 27 GLY A 44 SITE 2 AC5 7 THR A 76 ALA A 80 HIS A 109 SITE 1 AC6 3 HIS A 264 ASP A 267 HOH A 451 SITE 1 AC7 10 ARG A 145 GLU A 149 ALA A 152 GLY A 153 SITE 2 AC7 10 LYS A 154 ILE A 155 HOH A 434 HOH A 443 SITE 3 AC7 10 HOH A 449 ALA B 254 SITE 1 AC8 23 GLY B 8 GLY B 10 ASN B 11 MET B 12 SITE 2 AC8 23 PHE B 30 ASP B 31 PRO B 32 ALA B 33 SITE 3 AC8 23 MET B 64 LEU B 65 PRO B 66 VAL B 70 SITE 4 AC8 23 THR B 93 VAL B 118 GLY B 121 LYS B 168 SITE 5 AC8 23 LEU B 240 LYS B 243 HOH B 402 HOH B 416 SITE 6 AC8 23 HOH B 432 HOH B 466 HOH B 472 SITE 1 AC9 5 ALA A 274 ASP A 275 SER B 119 GLY B 120 SITE 2 AC9 5 PHE B 236 SITE 1 AD1 6 SER B 95 ASP B 98 ASP B 250 HOH B 436 SITE 2 AD1 6 HOH B 476 HOH B 482 CRYST1 129.160 129.160 70.430 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007742 0.004470 0.000000 0.00000 SCALE2 0.000000 0.008940 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014198 0.00000