data_5YDY # _entry.id 5YDY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5YDY pdb_00005ydy 10.2210/pdb5ydy/pdb WWPDB D_1300005108 ? ? BMRB 36115 ? 10.13018/BMR36115 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-05-02 2 'Structure model' 1 1 2019-05-15 3 'Structure model' 1 2 2019-05-22 4 'Structure model' 1 3 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' pdbx_nmr_software 4 3 'Structure model' refine 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_pdbx_nmr_software.name' 13 4 'Structure model' '_database_2.pdbx_DOI' 14 4 'Structure model' '_database_2.pdbx_database_accession' 15 4 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5YDY _pdbx_database_status.recvd_initial_deposition_date 2017-09-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'NMR structure of YAP1-2 WW2 domain with LATS1 PPxY motif complex.' _pdbx_database_related.db_id 36115 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Fan, J.S.' 1 ? 'Sivaraman, J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Oncotarget _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1949-2553 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first 8068 _citation.page_last 8080 _citation.title 'Biophysical studies and NMR structure of YAP2 WW domain - LATS1 PPxY motif complexes reveal the basis of their interaction.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.18632/oncotarget.23909 _citation.pdbx_database_id_PubMed 29487715 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Verma, A.' 1 ? primary 'Jing-Song, F.' 2 ? primary 'Finch-Edmondson, M.L.' 3 ? primary 'Velazquez-Campoy, A.' 4 ? primary 'Balasegaran, S.' 5 ? primary 'Sudol, M.' 6 ? primary 'Sivaraman, J.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'WW2 domain and PPxY motif complex' _entity.formula_weight 5997.581 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'WW2 domain and PPxY motif complex' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code SGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRLDPRGGGGNRQPPPPYPLTA _entity_poly.pdbx_seq_one_letter_code_can SGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRLDPRGGGGNRQPPPPYPLTA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 PRO n 1 4 LEU n 1 5 PRO n 1 6 ASP n 1 7 GLY n 1 8 TRP n 1 9 GLU n 1 10 GLN n 1 11 ALA n 1 12 MET n 1 13 THR n 1 14 GLN n 1 15 ASP n 1 16 GLY n 1 17 GLU n 1 18 ILE n 1 19 TYR n 1 20 TYR n 1 21 ILE n 1 22 ASN n 1 23 HIS n 1 24 LYS n 1 25 ASN n 1 26 LYS n 1 27 THR n 1 28 THR n 1 29 SER n 1 30 TRP n 1 31 LEU n 1 32 ASP n 1 33 PRO n 1 34 ARG n 1 35 LEU n 1 36 ASP n 1 37 PRO n 1 38 ARG n 1 39 GLY n 1 40 GLY n 1 41 GLY n 1 42 GLY n 1 43 ASN n 1 44 ARG n 1 45 GLN n 1 46 PRO n 1 47 PRO n 1 48 PRO n 1 49 PRO n 1 50 TYR n 1 51 PRO n 1 52 LEU n 1 53 THR n 1 54 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 54 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cloning vector pGEM3_Zf' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 269273 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 8 8 SER SER A . n A 1 2 GLY 2 9 9 GLY GLY A . n A 1 3 PRO 3 10 10 PRO PRO A . n A 1 4 LEU 4 11 11 LEU LEU A . n A 1 5 PRO 5 12 12 PRO PRO A . n A 1 6 ASP 6 13 13 ASP ASP A . n A 1 7 GLY 7 14 14 GLY GLY A . n A 1 8 TRP 8 15 15 TRP TRP A . n A 1 9 GLU 9 16 16 GLU GLU A . n A 1 10 GLN 10 17 17 GLN GLN A . n A 1 11 ALA 11 18 18 ALA ALA A . n A 1 12 MET 12 19 19 MET MET A . n A 1 13 THR 13 20 20 THR THR A . n A 1 14 GLN 14 21 21 GLN GLN A . n A 1 15 ASP 15 22 22 ASP ASP A . n A 1 16 GLY 16 23 23 GLY GLY A . n A 1 17 GLU 17 24 24 GLU GLU A . n A 1 18 ILE 18 25 25 ILE ILE A . n A 1 19 TYR 19 26 26 TYR TYR A . n A 1 20 TYR 20 27 27 TYR TYR A . n A 1 21 ILE 21 28 28 ILE ILE A . n A 1 22 ASN 22 29 29 ASN ASN A . n A 1 23 HIS 23 30 30 HIS HIS A . n A 1 24 LYS 24 31 31 LYS LYS A . n A 1 25 ASN 25 32 32 ASN ASN A . n A 1 26 LYS 26 33 33 LYS LYS A . n A 1 27 THR 27 34 34 THR THR A . n A 1 28 THR 28 35 35 THR THR A . n A 1 29 SER 29 36 36 SER SER A . n A 1 30 TRP 30 37 37 TRP TRP A . n A 1 31 LEU 31 38 38 LEU LEU A . n A 1 32 ASP 32 39 39 ASP ASP A . n A 1 33 PRO 33 40 40 PRO PRO A . n A 1 34 ARG 34 41 41 ARG ARG A . n A 1 35 LEU 35 42 42 LEU LEU A . n A 1 36 ASP 36 43 43 ASP ASP A . n A 1 37 PRO 37 44 44 PRO PRO A . n A 1 38 ARG 38 45 45 ARG ARG A . n A 1 39 GLY 39 46 46 GLY GLY A . n A 1 40 GLY 40 47 47 GLY GLY A . n A 1 41 GLY 41 48 48 GLY GLY A . n A 1 42 GLY 42 49 49 GLY GLY A . n A 1 43 ASN 43 50 50 ASN ASN A . n A 1 44 ARG 44 51 51 ARG ARG A . n A 1 45 GLN 45 52 52 GLN GLN A . n A 1 46 PRO 46 53 53 PRO PRO A . n A 1 47 PRO 47 54 54 PRO PRO A . n A 1 48 PRO 48 55 55 PRO PRO A . n A 1 49 PRO 49 56 56 PRO PRO A . n A 1 50 TYR 50 57 57 TYR TYR A . n A 1 51 PRO 51 58 58 PRO PRO A . n A 1 52 LEU 52 59 59 LEU LEU A . n A 1 53 THR 53 60 60 THR THR A . n A 1 54 ALA 54 61 61 ALA ALA A . n # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? 'Axel T. Brunger' axel.brunger@yale.edu ? ? ? ? Fortran_77 http://cns-online.org/ ? CNS ? ? package . 1 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'July. 13, 2016' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.22 2 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5YDY _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5YDY _struct.title 'NMR structure of YAP1-2 WW2 domain with LATS1 PPxY motif complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5YDY _struct_keywords.text 'Hippo pathway, YAP, LATs, WW domain, PPxY motif, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5YDY _struct_ref.pdbx_db_accession 5YDY _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5YDY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 54 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5YDY _struct_ref_seq.db_align_beg 8 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 61 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 61 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 4650 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TRP A 8 ? ALA A 11 ? TRP A 15 ALA A 18 AA1 2 TYR A 19 ? ASN A 22 ? TYR A 26 ASN A 29 AA1 3 THR A 27 ? SER A 29 ? THR A 34 SER A 36 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 9 ? N GLU A 16 O ILE A 21 ? O ILE A 28 AA1 2 3 N ASN A 22 ? N ASN A 29 O THR A 27 ? O THR A 34 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 3 O A LEU 11 ? ? H A ASP 13 ? ? 1.50 2 3 O A LEU 11 ? ? N A ASP 13 ? ? 1.93 3 5 O A ASP 43 ? ? H A ARG 45 ? ? 1.57 4 5 O A THR 35 ? ? HG A SER 36 ? ? 1.58 5 6 O A LEU 11 ? ? H A ASP 13 ? ? 1.47 6 6 O A LEU 11 ? ? N A ASP 13 ? ? 1.94 7 7 O A LEU 59 ? ? H A ALA 61 ? ? 1.59 8 8 H A ASN 29 ? ? O A THR 34 ? ? 1.57 9 9 HG A SER 36 ? ? H A TRP 37 ? ? 1.26 10 12 O A GLY 14 ? ? HD21 A ASN 29 ? ? 1.55 11 13 O A LEU 11 ? ? H A ASP 13 ? ? 1.50 12 13 H A ASN 29 ? ? O A THR 34 ? ? 1.58 13 13 O A ASN 32 ? ? HG1 A THR 34 ? ? 1.59 14 13 O A LEU 11 ? ? N A ASP 13 ? ? 1.95 15 16 O A LEU 11 ? ? H A ASP 13 ? ? 1.50 16 16 O A LEU 11 ? ? N A ASP 13 ? ? 1.98 17 17 O A LEU 11 ? ? H A ASP 13 ? ? 1.48 18 17 H A ASN 29 ? ? O A THR 34 ? ? 1.58 19 17 OE1 A GLN 17 ? ? H A ALA 18 ? ? 1.58 20 17 O A LEU 11 ? ? N A ASP 13 ? ? 1.96 21 17 O A ASN 32 ? ? OG1 A THR 34 ? ? 2.19 22 18 O A GLY 14 ? ? HD21 A ASN 29 ? ? 1.57 23 20 O A PRO 58 ? ? H A THR 60 ? ? 1.57 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 10 ? ? -49.06 179.19 2 1 PRO A 12 ? ? -19.15 -51.33 3 1 ASP A 13 ? ? 152.74 110.38 4 1 ILE A 25 ? ? 37.02 108.74 5 1 LEU A 38 ? ? -34.04 129.80 6 1 PRO A 40 ? ? -76.43 -96.47 7 1 ASP A 43 ? ? 169.75 75.03 8 1 PRO A 44 ? ? -50.89 -152.99 9 1 ARG A 45 ? ? -52.69 176.06 10 1 GLN A 52 ? ? -35.94 131.41 11 1 THR A 60 ? ? 84.23 153.83 12 2 PRO A 10 ? ? -48.31 -177.85 13 2 PRO A 12 ? ? -17.91 -56.40 14 2 ASP A 13 ? ? 157.92 109.96 15 2 ILE A 25 ? ? 34.82 109.12 16 2 LYS A 33 ? ? 36.90 38.94 17 2 LEU A 38 ? ? -33.96 157.74 18 2 PRO A 40 ? ? -78.08 -81.15 19 2 ARG A 41 ? ? -95.68 31.50 20 2 PRO A 44 ? ? -45.96 101.59 21 2 ARG A 51 ? ? 56.86 -172.20 22 2 THR A 60 ? ? -179.60 64.59 23 3 PRO A 12 ? ? -19.10 -18.36 24 3 ASP A 13 ? ? 111.14 115.45 25 3 THR A 20 ? ? -87.09 -159.78 26 3 ILE A 25 ? ? 36.14 110.17 27 3 HIS A 30 ? ? -69.12 1.50 28 3 TRP A 37 ? ? -132.21 -43.11 29 3 LEU A 38 ? ? -43.03 158.11 30 3 PRO A 40 ? ? -75.72 -75.02 31 3 LEU A 42 ? ? -79.15 38.67 32 3 ASP A 43 ? ? 72.25 118.93 33 3 PRO A 44 ? ? -44.64 75.90 34 3 GLN A 52 ? ? -35.85 123.97 35 3 PRO A 58 ? ? -49.01 -146.25 36 3 THR A 60 ? ? -34.72 115.24 37 4 PRO A 10 ? ? -73.74 -169.09 38 4 PRO A 12 ? ? -14.15 -49.03 39 4 ASP A 13 ? ? 147.71 112.59 40 4 ILE A 25 ? ? 36.97 109.92 41 4 SER A 36 ? ? -143.63 -159.62 42 4 ARG A 41 ? ? -147.29 34.58 43 4 LEU A 42 ? ? -98.01 55.12 44 4 PRO A 44 ? ? -46.72 -173.95 45 4 ARG A 45 ? ? -154.84 1.84 46 4 ASN A 50 ? ? 83.58 -169.08 47 4 ARG A 51 ? ? -179.43 136.84 48 4 LEU A 59 ? ? -50.06 83.74 49 4 THR A 60 ? ? 63.79 78.12 50 5 PRO A 12 ? ? -17.38 -50.04 51 5 ASP A 13 ? ? 151.64 111.86 52 5 ILE A 25 ? ? 21.70 109.41 53 5 ASP A 43 ? ? 32.77 88.61 54 5 PRO A 44 ? ? -50.71 64.96 55 5 ARG A 45 ? ? -111.89 -77.92 56 5 ASN A 50 ? ? 51.25 110.96 57 5 LEU A 59 ? ? -35.36 114.43 58 5 THR A 60 ? ? -177.46 -178.75 59 6 PRO A 10 ? ? -66.39 -176.11 60 6 PRO A 12 ? ? -20.30 -15.66 61 6 ASP A 13 ? ? 108.67 113.36 62 6 ILE A 25 ? ? 33.21 107.39 63 6 LEU A 38 ? ? -33.35 148.47 64 6 PRO A 40 ? ? -77.82 -75.90 65 6 LEU A 42 ? ? -153.94 89.15 66 6 PRO A 44 ? ? -79.10 38.93 67 6 ARG A 45 ? ? 34.28 -98.66 68 6 ARG A 51 ? ? 46.76 97.08 69 6 GLN A 52 ? ? -42.93 172.71 70 6 THR A 60 ? ? -44.96 177.81 71 7 PRO A 12 ? ? -17.99 -45.71 72 7 ASP A 13 ? ? 146.30 111.76 73 7 ILE A 25 ? ? 37.52 105.68 74 7 HIS A 30 ? ? -66.81 1.98 75 7 ARG A 41 ? ? -146.45 59.16 76 7 ASP A 43 ? ? 35.38 71.56 77 7 ARG A 45 ? ? -45.35 89.91 78 7 THR A 60 ? ? -65.45 65.70 79 8 PRO A 10 ? ? -51.74 -176.74 80 8 PRO A 12 ? ? -17.33 -48.99 81 8 ASP A 13 ? ? 149.09 111.61 82 8 ILE A 25 ? ? 35.29 108.11 83 8 LEU A 38 ? ? -34.93 157.93 84 8 ARG A 45 ? ? 48.80 79.45 85 8 ASN A 50 ? ? 44.17 -158.24 86 8 ARG A 51 ? ? 57.94 124.35 87 8 PRO A 55 ? ? -48.58 161.25 88 8 THR A 60 ? ? -35.50 137.85 89 9 PRO A 10 ? ? -48.79 151.43 90 9 PRO A 12 ? ? -17.73 -48.43 91 9 ASP A 13 ? ? 149.32 111.69 92 9 ILE A 25 ? ? 36.87 107.01 93 9 LEU A 38 ? ? -34.18 156.31 94 9 PRO A 40 ? ? -52.51 -74.12 95 9 ARG A 41 ? ? -142.97 47.73 96 9 LEU A 42 ? ? -154.18 52.53 97 9 PRO A 44 ? ? -75.93 -153.31 98 9 PRO A 56 ? ? -46.78 -149.32 99 9 TYR A 57 ? ? 138.16 89.42 100 10 PRO A 12 ? ? -17.16 -50.94 101 10 ASP A 13 ? ? 152.35 111.75 102 10 ILE A 25 ? ? 24.22 109.38 103 10 HIS A 30 ? ? -67.23 1.74 104 10 LEU A 42 ? ? -143.86 46.20 105 10 PRO A 44 ? ? -75.96 -167.24 106 10 ASN A 50 ? ? 75.56 156.20 107 10 PRO A 58 ? ? -47.16 -152.14 108 10 LEU A 59 ? ? 57.76 73.08 109 11 PRO A 10 ? ? -71.46 -167.31 110 11 PRO A 12 ? ? -17.84 -50.92 111 11 ASP A 13 ? ? 152.25 110.86 112 11 ILE A 25 ? ? 27.88 110.85 113 11 ARG A 41 ? ? -140.67 56.03 114 11 ASP A 43 ? ? 35.98 59.86 115 11 PRO A 44 ? ? -46.75 97.24 116 11 ARG A 45 ? ? -73.17 -162.04 117 11 ASN A 50 ? ? 63.58 62.71 118 11 ARG A 51 ? ? -47.24 -177.97 119 12 PRO A 12 ? ? -16.43 -47.05 120 12 ASP A 13 ? ? 147.28 111.94 121 12 THR A 20 ? ? -89.16 -159.06 122 12 ILE A 25 ? ? 36.94 106.63 123 12 HIS A 30 ? ? -68.90 4.56 124 12 ARG A 41 ? ? -144.23 45.07 125 12 LEU A 42 ? ? -140.22 33.61 126 12 ASP A 43 ? ? 160.23 148.59 127 12 ARG A 45 ? ? -74.67 -102.19 128 13 PRO A 10 ? ? -48.57 173.23 129 13 PRO A 12 ? ? -20.67 -16.72 130 13 ASP A 13 ? ? 109.61 112.74 131 13 ILE A 25 ? ? 36.03 104.48 132 13 LEU A 42 ? ? -153.09 59.33 133 13 ARG A 45 ? ? 35.01 -105.14 134 13 GLN A 52 ? ? -42.29 163.43 135 13 LEU A 59 ? ? -39.60 137.66 136 14 PRO A 12 ? ? -17.17 -55.68 137 14 ASP A 13 ? ? 157.67 110.34 138 14 THR A 20 ? ? -93.35 -159.84 139 14 ILE A 25 ? ? 36.20 105.65 140 14 LEU A 38 ? ? -37.29 118.68 141 14 LEU A 42 ? ? -157.07 78.06 142 14 ASP A 43 ? ? 166.44 85.67 143 14 ARG A 45 ? ? 23.90 84.25 144 14 ASN A 50 ? ? -150.48 -149.56 145 14 GLN A 52 ? ? -39.69 154.97 146 15 PRO A 12 ? ? -18.61 -49.96 147 15 ASP A 13 ? ? 151.13 111.15 148 15 ILE A 25 ? ? 35.33 111.02 149 15 HIS A 30 ? ? -67.79 0.49 150 15 LEU A 42 ? ? -144.12 59.69 151 15 ASP A 43 ? ? -175.19 88.78 152 15 ASN A 50 ? ? -154.72 -33.31 153 15 ARG A 51 ? ? 50.11 168.91 154 16 PRO A 12 ? ? -30.59 -7.25 155 16 ASP A 13 ? ? 100.56 110.93 156 16 ILE A 25 ? ? 23.29 109.79 157 16 LEU A 42 ? ? -111.73 52.35 158 16 ASP A 43 ? ? 54.49 97.26 159 16 ARG A 45 ? ? -56.03 -122.70 160 16 THR A 60 ? ? 51.20 -169.84 161 17 PRO A 10 ? ? -71.51 -163.09 162 17 PRO A 12 ? ? -23.27 -13.35 163 17 ASP A 13 ? ? 105.91 112.36 164 17 ILE A 25 ? ? 28.55 105.62 165 17 LYS A 33 ? ? 38.46 39.33 166 17 LEU A 42 ? ? -150.29 82.74 167 17 ARG A 51 ? ? 68.39 106.40 168 18 PRO A 12 ? ? -17.73 -55.99 169 18 ASP A 13 ? ? 157.68 110.19 170 18 THR A 20 ? ? -94.59 -160.00 171 18 ILE A 25 ? ? 31.18 108.00 172 18 LEU A 38 ? ? -32.41 132.43 173 18 ASP A 43 ? ? 51.27 91.20 174 18 PRO A 44 ? ? -49.11 66.50 175 18 ASN A 50 ? ? -178.04 -145.16 176 18 ARG A 51 ? ? 76.75 152.99 177 18 LEU A 59 ? ? -35.78 97.52 178 18 THR A 60 ? ? 75.74 131.23 179 19 PRO A 10 ? ? -45.52 -178.58 180 19 PRO A 12 ? ? -17.42 -48.67 181 19 ASP A 13 ? ? 149.44 111.68 182 19 ILE A 25 ? ? 29.39 108.87 183 19 LEU A 38 ? ? -39.73 158.17 184 19 PRO A 40 ? ? -54.85 -79.69 185 19 ARG A 41 ? ? -141.76 34.69 186 19 LEU A 42 ? ? -95.54 53.17 187 19 ASP A 43 ? ? 72.18 90.48 188 19 PRO A 44 ? ? -49.55 96.81 189 19 PRO A 54 ? ? -44.71 102.73 190 19 LEU A 59 ? ? -59.33 179.33 191 19 THR A 60 ? ? -63.41 -158.35 192 20 PRO A 10 ? ? -64.34 -163.07 193 20 PRO A 12 ? ? -19.81 -47.94 194 20 ASP A 13 ? ? 149.69 111.38 195 20 ILE A 25 ? ? 31.08 110.49 196 20 HIS A 30 ? ? -67.69 1.43 197 20 ASP A 43 ? ? -33.47 108.88 198 20 LEU A 59 ? ? -63.16 67.21 199 20 THR A 60 ? ? 32.78 85.41 # _pdbx_nmr_ensemble.entry_id 5YDY _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5YDY _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '1.0 mM [U-100% 15N] WW2 domain and PPxY motif complex, 90% H2O/10% D2O' '90% H2O/10% D2O' 15N_sample solution ? 2 '1.00 mM WW2 domain and PPxY motif complex, 100% D2O' '100% D2O' un-labelled solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'WW2 domain and PPxY motif complex' 1.0 ? mM '[U-100% 15N]' 2 'WW2 domain and PPxY motif complex' 1.00 ? mM 'natural abundance' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 298 atm 1 6.0 100 ? 0.2 mM H2O 0.1 pH 0.01 0.1 K 2 298 atm 1 6.0 100 ? 0.2 mM D2O 0.1 pH 0.01 0.1 K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 2 2 '2D 1H-1H NOESY' 1 isotropic 2 1 1 '3D 1H-15N TOCSY' 1 isotropic 3 1 1 '3D 1H-15N NOESY' 1 isotropic # _pdbx_nmr_refine.entry_id 5YDY _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 3 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 2 'data analysis' Sparky ? Goddard 3 'structure calculation' 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PRO N N N N 233 PRO CA C N S 234 PRO C C N N 235 PRO O O N N 236 PRO CB C N N 237 PRO CG C N N 238 PRO CD C N N 239 PRO OXT O N N 240 PRO H H N N 241 PRO HA H N N 242 PRO HB2 H N N 243 PRO HB3 H N N 244 PRO HG2 H N N 245 PRO HG3 H N N 246 PRO HD2 H N N 247 PRO HD3 H N N 248 PRO HXT H N N 249 SER N N N N 250 SER CA C N S 251 SER C C N N 252 SER O O N N 253 SER CB C N N 254 SER OG O N N 255 SER OXT O N N 256 SER H H N N 257 SER H2 H N N 258 SER HA H N N 259 SER HB2 H N N 260 SER HB3 H N N 261 SER HG H N N 262 SER HXT H N N 263 THR N N N N 264 THR CA C N S 265 THR C C N N 266 THR O O N N 267 THR CB C N R 268 THR OG1 O N N 269 THR CG2 C N N 270 THR OXT O N N 271 THR H H N N 272 THR H2 H N N 273 THR HA H N N 274 THR HB H N N 275 THR HG1 H N N 276 THR HG21 H N N 277 THR HG22 H N N 278 THR HG23 H N N 279 THR HXT H N N 280 TRP N N N N 281 TRP CA C N S 282 TRP C C N N 283 TRP O O N N 284 TRP CB C N N 285 TRP CG C Y N 286 TRP CD1 C Y N 287 TRP CD2 C Y N 288 TRP NE1 N Y N 289 TRP CE2 C Y N 290 TRP CE3 C Y N 291 TRP CZ2 C Y N 292 TRP CZ3 C Y N 293 TRP CH2 C Y N 294 TRP OXT O N N 295 TRP H H N N 296 TRP H2 H N N 297 TRP HA H N N 298 TRP HB2 H N N 299 TRP HB3 H N N 300 TRP HD1 H N N 301 TRP HE1 H N N 302 TRP HE3 H N N 303 TRP HZ2 H N N 304 TRP HZ3 H N N 305 TRP HH2 H N N 306 TRP HXT H N N 307 TYR N N N N 308 TYR CA C N S 309 TYR C C N N 310 TYR O O N N 311 TYR CB C N N 312 TYR CG C Y N 313 TYR CD1 C Y N 314 TYR CD2 C Y N 315 TYR CE1 C Y N 316 TYR CE2 C Y N 317 TYR CZ C Y N 318 TYR OH O N N 319 TYR OXT O N N 320 TYR H H N N 321 TYR H2 H N N 322 TYR HA H N N 323 TYR HB2 H N N 324 TYR HB3 H N N 325 TYR HD1 H N N 326 TYR HD2 H N N 327 TYR HE1 H N N 328 TYR HE2 H N N 329 TYR HH H N N 330 TYR HXT H N N 331 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PRO N CA sing N N 222 PRO N CD sing N N 223 PRO N H sing N N 224 PRO CA C sing N N 225 PRO CA CB sing N N 226 PRO CA HA sing N N 227 PRO C O doub N N 228 PRO C OXT sing N N 229 PRO CB CG sing N N 230 PRO CB HB2 sing N N 231 PRO CB HB3 sing N N 232 PRO CG CD sing N N 233 PRO CG HG2 sing N N 234 PRO CG HG3 sing N N 235 PRO CD HD2 sing N N 236 PRO CD HD3 sing N N 237 PRO OXT HXT sing N N 238 SER N CA sing N N 239 SER N H sing N N 240 SER N H2 sing N N 241 SER CA C sing N N 242 SER CA CB sing N N 243 SER CA HA sing N N 244 SER C O doub N N 245 SER C OXT sing N N 246 SER CB OG sing N N 247 SER CB HB2 sing N N 248 SER CB HB3 sing N N 249 SER OG HG sing N N 250 SER OXT HXT sing N N 251 THR N CA sing N N 252 THR N H sing N N 253 THR N H2 sing N N 254 THR CA C sing N N 255 THR CA CB sing N N 256 THR CA HA sing N N 257 THR C O doub N N 258 THR C OXT sing N N 259 THR CB OG1 sing N N 260 THR CB CG2 sing N N 261 THR CB HB sing N N 262 THR OG1 HG1 sing N N 263 THR CG2 HG21 sing N N 264 THR CG2 HG22 sing N N 265 THR CG2 HG23 sing N N 266 THR OXT HXT sing N N 267 TRP N CA sing N N 268 TRP N H sing N N 269 TRP N H2 sing N N 270 TRP CA C sing N N 271 TRP CA CB sing N N 272 TRP CA HA sing N N 273 TRP C O doub N N 274 TRP C OXT sing N N 275 TRP CB CG sing N N 276 TRP CB HB2 sing N N 277 TRP CB HB3 sing N N 278 TRP CG CD1 doub Y N 279 TRP CG CD2 sing Y N 280 TRP CD1 NE1 sing Y N 281 TRP CD1 HD1 sing N N 282 TRP CD2 CE2 doub Y N 283 TRP CD2 CE3 sing Y N 284 TRP NE1 CE2 sing Y N 285 TRP NE1 HE1 sing N N 286 TRP CE2 CZ2 sing Y N 287 TRP CE3 CZ3 doub Y N 288 TRP CE3 HE3 sing N N 289 TRP CZ2 CH2 doub Y N 290 TRP CZ2 HZ2 sing N N 291 TRP CZ3 CH2 sing Y N 292 TRP CZ3 HZ3 sing N N 293 TRP CH2 HH2 sing N N 294 TRP OXT HXT sing N N 295 TYR N CA sing N N 296 TYR N H sing N N 297 TYR N H2 sing N N 298 TYR CA C sing N N 299 TYR CA CB sing N N 300 TYR CA HA sing N N 301 TYR C O doub N N 302 TYR C OXT sing N N 303 TYR CB CG sing N N 304 TYR CB HB2 sing N N 305 TYR CB HB3 sing N N 306 TYR CG CD1 doub Y N 307 TYR CG CD2 sing Y N 308 TYR CD1 CE1 sing Y N 309 TYR CD1 HD1 sing N N 310 TYR CD2 CE2 doub Y N 311 TYR CD2 HD2 sing N N 312 TYR CE1 CZ doub Y N 313 TYR CE1 HE1 sing N N 314 TYR CE2 CZ sing Y N 315 TYR CE2 HE2 sing N N 316 TYR CZ OH sing N N 317 TYR OH HH sing N N 318 TYR OXT HXT sing N N 319 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 5YDY _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_