HEADER HYDROLASE 04-OCT-17 5YIF TITLE PYRUVYLATED BETA-D-GALACTOSIDASE FROM BACILLUS SP. HMA207, E163A TITLE 2 MUTANT PYRUVYLATED BETA-D-GALACTOSE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRUVYLATED BETA-D-GALACTOSIDASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SP.; SOURCE 3 ORGANISM_TAXID: 1409; SOURCE 4 STRAIN: HMA207; SOURCE 5 GENE: ORF1119; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: CODON PLUS RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET32B KEYWDS GLYCOSIDE HYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.TANUMA,C.YAMADA,T.ARAKAWA,Y.HIGUCHI,K.TAKEGAWA,S.FUSHINOBU REVDAT 2 22-NOV-23 5YIF 1 REMARK REVDAT 1 29-AUG-18 5YIF 0 JRNL AUTH Y.HIGUCHI,H.MATSUFUJI,M.TANUMA,T.ARAKAWA,K.MORI,C.YAMADA, JRNL AUTH 2 R.SHOFIA,E.MATSUNAGA,K.TASHIRO,S.FUSHINOBU,K.TAKEGAWA JRNL TITL IDENTIFICATION AND CHARACTERIZATION OF A NOVEL JRNL TITL 2 BETA-D-GALACTOSIDASE THAT RELEASES PYRUVYLATED GALACTOSE. JRNL REF SCI REP V. 8 12013 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 30104607 JRNL DOI 10.1038/S41598-018-30508-4 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 99.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 40594 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2049 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2947 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2800 REMARK 3 BIN FREE R VALUE SET COUNT : 143 REMARK 3 BIN FREE R VALUE : 0.3460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7576 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 167 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.466 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.295 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.244 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.102 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.892 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7844 ; 0.014 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 7192 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10632 ; 1.737 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16578 ; 1.116 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 914 ; 7.387 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 400 ;37.555 ;24.250 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1302 ;19.718 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;17.969 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1074 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8840 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1918 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3668 ; 2.856 ; 4.293 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3667 ; 2.854 ; 4.292 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4578 ; 4.364 ; 6.425 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4579 ; 4.365 ; 6.427 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4176 ; 3.153 ; 4.558 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4176 ; 3.153 ; 4.558 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 6055 ; 4.886 ; 6.715 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 9197 ; 6.714 ;49.320 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 9180 ; 6.715 ;49.284 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5YIF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1300005295. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9800 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42682 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.85500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5YHS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG 300, 0.1 M PHOSPHATE-CITRATE, REMARK 280 PH 5.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 100.28933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 50.14467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 50.14467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 100.28933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 601 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 601 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 311 REMARK 465 GLU A 312 REMARK 465 GLU A 313 REMARK 465 HIS A 314 REMARK 465 SER A 315 REMARK 465 ARG A 316 REMARK 465 GLU A 317 REMARK 465 ASN A 318 REMARK 465 SER A 319 REMARK 465 THR A 320 REMARK 465 HIS A 470 REMARK 465 HIS A 471 REMARK 465 HIS A 472 REMARK 465 HIS A 473 REMARK 465 HIS A 474 REMARK 465 HIS A 475 REMARK 465 SER B 311 REMARK 465 GLU B 312 REMARK 465 GLU B 313 REMARK 465 HIS B 314 REMARK 465 SER B 315 REMARK 465 ARG B 316 REMARK 465 GLU B 317 REMARK 465 ASN B 318 REMARK 465 SER B 319 REMARK 465 THR B 320 REMARK 465 HIS B 470 REMARK 465 HIS B 471 REMARK 465 HIS B 472 REMARK 465 HIS B 473 REMARK 465 HIS B 474 REMARK 465 HIS B 475 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 21 44.10 39.14 REMARK 500 ASP A 25 45.56 39.94 REMARK 500 ALA A 51 -127.29 54.26 REMARK 500 ASP A 87 -163.15 -126.94 REMARK 500 HIS A 118 54.25 -112.77 REMARK 500 TRP A 119 -11.71 83.55 REMARK 500 THR A 160 -72.18 -72.40 REMARK 500 VAL A 389 69.43 -104.05 REMARK 500 SER A 421 108.63 89.08 REMARK 500 TRP A 428 -57.35 -28.83 REMARK 500 ASP B 25 48.35 38.52 REMARK 500 ALA B 51 -128.48 56.69 REMARK 500 HIS B 118 59.41 -110.03 REMARK 500 TRP B 119 -7.14 72.14 REMARK 500 THR B 160 -74.78 -71.49 REMARK 500 PRO B 323 -167.72 -74.60 REMARK 500 ASP B 367 30.16 -85.98 REMARK 500 VAL B 389 72.27 -103.29 REMARK 500 SER B 421 100.99 94.54 REMARK 500 TRP B 428 -59.76 -29.39 REMARK 500 ARG B 465 44.09 37.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8VR A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8VR B 501 DBREF 5YIF A 1 475 PDB 5YIF 5YIF 1 475 DBREF 5YIF B 1 475 PDB 5YIF 5YIF 1 475 SEQRES 1 A 475 MET LYS PHE PRO HIS ASP PHE LEU PHE GLY ALA ALA SER SEQRES 2 A 475 ALA SER TYR GLN VAL GLU GLY ALA TRP ASN GLU ASP GLY SEQRES 3 A 475 LYS GLY VAL THR ASN TRP ASP GLU PHE SER LYS ILE PRO SEQRES 4 A 475 GLY LYS THR TYR ASN GLY THR ASN GLY ASP ILE ALA VAL SEQRES 5 A 475 ASP HIS TYR HIS ARG TYR LYS GLU ASP VAL ARG LEU MET SEQRES 6 A 475 ALA GLU MET GLY LEU GLU SER TYR ARG PHE SER ILE SER SEQRES 7 A 475 TRP ALA ARG ILE LEU PRO THR GLY ASP GLY LYS VAL ASN SEQRES 8 A 475 GLU LYS GLY ILE GLU PHE TYR ASN ASN LEU ILE ASP GLU SEQRES 9 A 475 CYS LEU LYS TYR GLY ILE VAL PRO PHE VAL THR LEU TYR SEQRES 10 A 475 HIS TRP ASP LEU PRO LEU PRO LEU GLU LYS ASP GLY GLY SEQRES 11 A 475 TRP THR ASN LYS ARG THR ALA GLU ALA PHE VAL LYS TYR SEQRES 12 A 475 ALA GLU THR CYS PHE LYS ALA PHE GLY ASP ARG VAL LYS SEQRES 13 A 475 HIS TRP ILE THR PHE ASN ALA THR VAL MET PHE CYS GLY SEQRES 14 A 475 LEU GLY TYR LEU LYS GLY ALA HIS PRO PRO GLY ILE GLN SEQRES 15 A 475 ASN ASP VAL PRO LYS TYR PHE GLN ALA THR HIS TYR VAL SEQRES 16 A 475 PHE TYR ALA HIS ALA LYS THR VAL ALA VAL TYR LYS GLN SEQRES 17 A 475 LEU LYS GLN TYR GLY GLU ILE GLY ILE THR HIS VAL PHE SEQRES 18 A 475 LEU PRO ALA TYR SER VAL ASP ASP GLN LYS GLU ASN ILE SEQRES 19 A 475 GLN ALA ALA ASN HIS ALA ASN GLU TYR GLU THR TYR TRP SEQRES 20 A 475 TYR TYR ASP PRO ILE LEU LYS GLY GLU TYR PRO SER TYR SEQRES 21 A 475 VAL VAL GLN GLN LEU LYS GLU LYS GLY TRP THR PRO ASN SEQRES 22 A 475 TRP THR VAL GLU GLU LEU GLU ILE ILE LYS GLN ASN ALA SEQRES 23 A 475 GLU GLU ASN ASP PHE ILE GLY LEU ASN TYR TYR GLN PRO SEQRES 24 A 475 ILE ARG VAL GLU ARG TYR ASP MET ASP ILE LYS SER GLU SEQRES 25 A 475 GLU HIS SER ARG GLU ASN SER THR LEU ALA PRO GLY ASN SEQRES 26 A 475 PRO SER PHE ASP GLY PHE TYR ARG THR VAL LYS MET ASP SEQRES 27 A 475 ASP LYS THR TYR THR LYS TRP GLY TRP GLU ILE SER PRO SEQRES 28 A 475 GLU GLY PHE LEU GLU GLY LEU HIS MET LEU LYS ALA ARG SEQRES 29 A 475 TYR GLY ASP ILE LYS MET TYR VAL THR GLU ASN GLY LEU SEQRES 30 A 475 GLY ASP GLU ASP PRO ILE ILE ASP GLY GLU ILE VAL ASP SEQRES 31 A 475 VAL PRO ARG ILE LYS PHE ILE GLU ALA HIS LEU LYS VAL SEQRES 32 A 475 MET LYS ARG ALA ILE GLU GLU GLY ILE ASN LEU LYS GLY SEQRES 33 A 475 TYR TYR ALA TRP SER VAL ILE ASP LEU LEU SER TRP LEU SEQRES 34 A 475 ASN GLY TYR LYS LYS GLN TYR GLY PHE ILE PHE VAL ASP SEQRES 35 A 475 HIS ASN ASP ASN LEU LYS ARG LYS LYS LYS LEU SER PHE SEQRES 36 A 475 HIS TRP TYR LYS ARG VAL VAL GLU THR ARG GLY GLU GLU SEQRES 37 A 475 LEU HIS HIS HIS HIS HIS HIS SEQRES 1 B 475 MET LYS PHE PRO HIS ASP PHE LEU PHE GLY ALA ALA SER SEQRES 2 B 475 ALA SER TYR GLN VAL GLU GLY ALA TRP ASN GLU ASP GLY SEQRES 3 B 475 LYS GLY VAL THR ASN TRP ASP GLU PHE SER LYS ILE PRO SEQRES 4 B 475 GLY LYS THR TYR ASN GLY THR ASN GLY ASP ILE ALA VAL SEQRES 5 B 475 ASP HIS TYR HIS ARG TYR LYS GLU ASP VAL ARG LEU MET SEQRES 6 B 475 ALA GLU MET GLY LEU GLU SER TYR ARG PHE SER ILE SER SEQRES 7 B 475 TRP ALA ARG ILE LEU PRO THR GLY ASP GLY LYS VAL ASN SEQRES 8 B 475 GLU LYS GLY ILE GLU PHE TYR ASN ASN LEU ILE ASP GLU SEQRES 9 B 475 CYS LEU LYS TYR GLY ILE VAL PRO PHE VAL THR LEU TYR SEQRES 10 B 475 HIS TRP ASP LEU PRO LEU PRO LEU GLU LYS ASP GLY GLY SEQRES 11 B 475 TRP THR ASN LYS ARG THR ALA GLU ALA PHE VAL LYS TYR SEQRES 12 B 475 ALA GLU THR CYS PHE LYS ALA PHE GLY ASP ARG VAL LYS SEQRES 13 B 475 HIS TRP ILE THR PHE ASN ALA THR VAL MET PHE CYS GLY SEQRES 14 B 475 LEU GLY TYR LEU LYS GLY ALA HIS PRO PRO GLY ILE GLN SEQRES 15 B 475 ASN ASP VAL PRO LYS TYR PHE GLN ALA THR HIS TYR VAL SEQRES 16 B 475 PHE TYR ALA HIS ALA LYS THR VAL ALA VAL TYR LYS GLN SEQRES 17 B 475 LEU LYS GLN TYR GLY GLU ILE GLY ILE THR HIS VAL PHE SEQRES 18 B 475 LEU PRO ALA TYR SER VAL ASP ASP GLN LYS GLU ASN ILE SEQRES 19 B 475 GLN ALA ALA ASN HIS ALA ASN GLU TYR GLU THR TYR TRP SEQRES 20 B 475 TYR TYR ASP PRO ILE LEU LYS GLY GLU TYR PRO SER TYR SEQRES 21 B 475 VAL VAL GLN GLN LEU LYS GLU LYS GLY TRP THR PRO ASN SEQRES 22 B 475 TRP THR VAL GLU GLU LEU GLU ILE ILE LYS GLN ASN ALA SEQRES 23 B 475 GLU GLU ASN ASP PHE ILE GLY LEU ASN TYR TYR GLN PRO SEQRES 24 B 475 ILE ARG VAL GLU ARG TYR ASP MET ASP ILE LYS SER GLU SEQRES 25 B 475 GLU HIS SER ARG GLU ASN SER THR LEU ALA PRO GLY ASN SEQRES 26 B 475 PRO SER PHE ASP GLY PHE TYR ARG THR VAL LYS MET ASP SEQRES 27 B 475 ASP LYS THR TYR THR LYS TRP GLY TRP GLU ILE SER PRO SEQRES 28 B 475 GLU GLY PHE LEU GLU GLY LEU HIS MET LEU LYS ALA ARG SEQRES 29 B 475 TYR GLY ASP ILE LYS MET TYR VAL THR GLU ASN GLY LEU SEQRES 30 B 475 GLY ASP GLU ASP PRO ILE ILE ASP GLY GLU ILE VAL ASP SEQRES 31 B 475 VAL PRO ARG ILE LYS PHE ILE GLU ALA HIS LEU LYS VAL SEQRES 32 B 475 MET LYS ARG ALA ILE GLU GLU GLY ILE ASN LEU LYS GLY SEQRES 33 B 475 TYR TYR ALA TRP SER VAL ILE ASP LEU LEU SER TRP LEU SEQRES 34 B 475 ASN GLY TYR LYS LYS GLN TYR GLY PHE ILE PHE VAL ASP SEQRES 35 B 475 HIS ASN ASP ASN LEU LYS ARG LYS LYS LYS LEU SER PHE SEQRES 36 B 475 HIS TRP TYR LYS ARG VAL VAL GLU THR ARG GLY GLU GLU SEQRES 37 B 475 LEU HIS HIS HIS HIS HIS HIS HET 8VR A 501 17 HET 8VR B 501 17 HETNAM 8VR (2R,4AR,6R,7R,8R,8AR)-2-METHYL-6,7,8-TRIS(OXIDANYL)-4, HETNAM 2 8VR 4A,6,7,8,8A-HEXAHYDROPYRANO[3,2-D][1,3]DIOXINE-2- HETNAM 3 8VR CARBOXYLIC ACID FORMUL 3 8VR 2(C9 H14 O8) FORMUL 5 HOH *167(H2 O) HELIX 1 AA1 ALA A 14 GLU A 19 1 6 HELIX 2 AA2 THR A 30 SER A 36 1 7 HELIX 3 AA3 THR A 42 THR A 46 5 5 HELIX 4 AA4 ARG A 57 MET A 68 1 12 HELIX 5 AA5 SER A 78 LEU A 83 1 6 HELIX 6 AA6 ASN A 91 TYR A 108 1 18 HELIX 7 AA7 PRO A 122 ASP A 128 1 7 HELIX 8 AA8 GLY A 129 THR A 132 5 4 HELIX 9 AA9 ASN A 133 GLY A 152 1 20 HELIX 10 AB1 ALA A 163 LEU A 173 1 11 HELIX 11 AB2 ASP A 184 LEU A 209 1 26 HELIX 12 AB3 GLN A 230 THR A 245 1 16 HELIX 13 AB4 THR A 245 LYS A 254 1 10 HELIX 14 AB5 PRO A 258 GLY A 269 1 12 HELIX 15 AB6 THR A 275 ALA A 286 1 12 HELIX 16 AB7 GLU A 287 ASN A 289 5 3 HELIX 17 AB8 SER A 350 GLY A 366 1 17 HELIX 18 AB9 ASP A 390 GLU A 410 1 21 HELIX 19 AC1 LYS A 452 THR A 464 1 13 HELIX 20 AC2 ALA B 14 GLU B 19 1 6 HELIX 21 AC3 THR B 30 SER B 36 1 7 HELIX 22 AC4 THR B 42 THR B 46 5 5 HELIX 23 AC5 ARG B 57 MET B 68 1 12 HELIX 24 AC6 SER B 78 LEU B 83 1 6 HELIX 25 AC7 ASN B 91 TYR B 108 1 18 HELIX 26 AC8 PRO B 122 ASP B 128 1 7 HELIX 27 AC9 GLY B 129 THR B 132 5 4 HELIX 28 AD1 ASN B 133 GLY B 152 1 20 HELIX 29 AD2 ALA B 163 LEU B 173 1 11 HELIX 30 AD3 ASP B 184 LEU B 209 1 26 HELIX 31 AD4 GLN B 230 THR B 245 1 16 HELIX 32 AD5 THR B 245 LYS B 254 1 10 HELIX 33 AD6 PRO B 258 GLY B 269 1 12 HELIX 34 AD7 THR B 275 ALA B 286 1 12 HELIX 35 AD8 GLU B 287 ASN B 289 5 3 HELIX 36 AD9 SER B 350 GLY B 366 1 17 HELIX 37 AE1 ASP B 390 GLU B 410 1 21 HELIX 38 AE2 LYS B 452 THR B 464 1 13 SHEET 1 AA1 9 LEU A 8 ALA A 12 0 SHEET 2 AA1 9 SER A 72 SER A 76 1 O ARG A 74 N ALA A 11 SHEET 3 AA1 9 VAL A 111 TYR A 117 1 O THR A 115 N PHE A 75 SHEET 4 AA1 9 HIS A 157 ASN A 162 1 O ILE A 159 N VAL A 114 SHEET 5 AA1 9 GLU A 214 PHE A 221 1 O THR A 218 N PHE A 161 SHEET 6 AA1 9 PHE A 291 TYR A 296 1 O ASN A 295 N PHE A 221 SHEET 7 AA1 9 MET A 370 ASN A 375 1 O TYR A 371 N LEU A 294 SHEET 8 AA1 9 LEU A 414 TRP A 420 1 O LYS A 415 N MET A 370 SHEET 9 AA1 9 LEU A 8 ALA A 12 1 N GLY A 10 O TYR A 417 SHEET 1 AA2 3 ALA A 224 SER A 226 0 SHEET 2 AA2 3 ILE A 300 ARG A 304 1 O ILE A 300 N TYR A 225 SHEET 3 AA2 3 TYR A 332 THR A 334 -1 O ARG A 333 N GLU A 303 SHEET 1 AA3 2 THR A 341 TYR A 342 0 SHEET 2 AA3 2 GLU A 348 ILE A 349 -1 O ILE A 349 N THR A 341 SHEET 1 AA4 2 ILE A 383 ILE A 384 0 SHEET 2 AA4 2 GLU A 387 ILE A 388 -1 O GLU A 387 N ILE A 384 SHEET 1 AA5 2 ILE A 439 VAL A 441 0 SHEET 2 AA5 2 ARG A 449 LYS A 451 -1 O LYS A 450 N PHE A 440 SHEET 1 AA6 9 LEU B 8 ALA B 12 0 SHEET 2 AA6 9 SER B 72 SER B 76 1 O ARG B 74 N ALA B 11 SHEET 3 AA6 9 VAL B 111 TYR B 117 1 O THR B 115 N PHE B 75 SHEET 4 AA6 9 HIS B 157 ASN B 162 1 O ILE B 159 N VAL B 114 SHEET 5 AA6 9 GLU B 214 PHE B 221 1 O THR B 218 N PHE B 161 SHEET 6 AA6 9 PHE B 291 TYR B 296 1 O ASN B 295 N PHE B 221 SHEET 7 AA6 9 MET B 370 ASN B 375 1 O TYR B 371 N LEU B 294 SHEET 8 AA6 9 LEU B 414 TRP B 420 1 O TYR B 418 N VAL B 372 SHEET 9 AA6 9 LEU B 8 ALA B 12 1 N GLY B 10 O TYR B 417 SHEET 1 AA7 3 ALA B 224 SER B 226 0 SHEET 2 AA7 3 ILE B 300 ARG B 304 1 O ILE B 300 N TYR B 225 SHEET 3 AA7 3 TYR B 332 VAL B 335 -1 O ARG B 333 N GLU B 303 SHEET 1 AA8 2 THR B 341 TYR B 342 0 SHEET 2 AA8 2 GLU B 348 ILE B 349 -1 O ILE B 349 N THR B 341 SHEET 1 AA9 2 ILE B 383 ILE B 384 0 SHEET 2 AA9 2 GLU B 387 ILE B 388 -1 O GLU B 387 N ILE B 384 SHEET 1 AB1 2 ILE B 439 VAL B 441 0 SHEET 2 AB1 2 ARG B 449 LYS B 451 -1 O LYS B 450 N PHE B 440 CISPEP 1 PRO A 178 PRO A 179 0 1.49 CISPEP 2 PRO B 178 PRO B 179 0 1.39 SITE 1 AC1 13 GLN A 17 HIS A 118 ASN A 162 ASN A 295 SITE 2 AC1 13 TYR A 297 TRP A 347 GLU A 374 TRP A 420 SITE 3 AC1 13 SER A 427 TRP A 428 LYS A 434 TYR A 436 SITE 4 AC1 13 HOH A 662 SITE 1 AC2 12 GLN B 17 HIS B 118 ASN B 162 ASN B 295 SITE 2 AC2 12 TYR B 297 TRP B 347 GLU B 374 TRP B 420 SITE 3 AC2 12 SER B 427 TRP B 428 LYS B 434 TYR B 436 CRYST1 114.780 114.780 150.434 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008712 0.005030 0.000000 0.00000 SCALE2 0.000000 0.010060 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006647 0.00000