data_5YKL # _entry.id 5YKL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5YKL pdb_00005ykl 10.2210/pdb5ykl/pdb WWPDB D_1300005446 ? ? BMRB 36125 ? 10.13018/BMR36125 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-10-25 2 'Structure model' 1 1 2019-03-27 3 'Structure model' 1 2 2023-06-14 4 'Structure model' 1 3 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' Other 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_nmr_spectrometer 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond 8 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' 14 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 15 3 'Structure model' '_pdbx_nmr_spectrometer.model' 16 4 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5YKL _pdbx_database_status.recvd_initial_deposition_date 2017-10-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # _pdbx_database_related.db_name BMRB _pdbx_database_related.details AY1C _pdbx_database_related.db_id 36125 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pal, I.' 1 ? 'Atreya, H.S.' 2 ? 'Bhunia, A.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first 4485 _citation.page_last 4485 _citation.title 'A Peptide-Nanoparticle System with Improved Efficacy against Multidrug Resistant Bacteria.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41598-019-41005-7 _citation.pdbx_database_id_PubMed 30872680 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pal, I.' 1 ? primary 'Bhattacharyya, D.' 2 ? primary 'Kar, R.K.' 3 0000-0003-4629-5863 primary 'Zarena, D.' 4 0000-0002-8826-4558 primary 'Bhunia, A.' 5 0000-0002-8752-2842 primary 'Atreya, H.S.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'designed AY1C' _entity.formula_weight 2265.869 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'Designed antimicrobial peptide' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code FLPKLFAKITKKNMAHIRC _entity_poly.pdbx_seq_one_letter_code_can FLPKLFAKITKKNMAHIRC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 LEU n 1 3 PRO n 1 4 LYS n 1 5 LEU n 1 6 PHE n 1 7 ALA n 1 8 LYS n 1 9 ILE n 1 10 THR n 1 11 LYS n 1 12 LYS n 1 13 ASN n 1 14 MET n 1 15 ALA n 1 16 HIS n 1 17 ILE n 1 18 ARG n 1 19 CYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 19 _pdbx_entity_src_syn.organism_scientific 'Odorrana andersonii' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 369514 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 1 1 PHE PHE A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 MET 14 14 14 MET MET A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 HIS 16 16 16 HIS HIS A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 CYS 19 19 19 CYS CYS A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5YKL _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5YKL _struct.title 'Antimicrobial peptide AY1C designed from the skin secretion of Chinese Odorous frogs' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5YKL _struct_keywords.text 'CYANA 2.1, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5YKL _struct_ref.pdbx_db_accession 5YKL _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5YKL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 19 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5YKL _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 19 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 19 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 2420 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support microscopy _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id MET _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 14 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ARG _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 18 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id MET _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 14 _struct_conf.end_auth_comp_id ARG _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 18 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 12 ? ? -104.82 -70.81 2 1 ARG A 18 ? ? -89.21 -73.06 3 2 LYS A 12 ? ? -104.46 -70.82 4 2 ARG A 18 ? ? -86.19 -73.06 5 3 LYS A 12 ? ? -119.52 -77.71 6 3 ARG A 18 ? ? -109.05 -73.13 7 4 LYS A 12 ? ? -119.62 -77.68 8 4 ARG A 18 ? ? -68.22 -73.11 9 5 PRO A 3 ? ? -69.74 -175.34 10 5 LYS A 12 ? ? -104.80 -70.83 11 5 ARG A 18 ? ? -95.16 -73.04 12 6 LYS A 12 ? ? -104.96 -70.81 13 6 ARG A 18 ? ? -89.04 -73.04 14 7 LYS A 12 ? ? -119.33 -77.68 15 7 ARG A 18 ? ? -112.24 -73.04 16 8 LYS A 12 ? ? -104.01 -70.77 17 8 ARG A 18 ? ? -100.33 -73.02 18 9 LEU A 2 ? ? 54.83 71.79 19 9 LYS A 12 ? ? -120.22 -77.51 20 9 ARG A 18 ? ? -93.45 -73.10 21 10 LYS A 12 ? ? -119.53 -77.71 22 10 ARG A 18 ? ? -106.26 -73.05 23 11 LYS A 4 ? ? -108.55 40.60 24 11 LYS A 12 ? ? -104.02 -70.79 25 11 ARG A 18 ? ? -72.65 -73.10 26 12 LEU A 2 ? ? 52.50 72.99 27 12 LYS A 12 ? ? -115.78 -77.93 28 12 ARG A 18 ? ? -63.54 -73.09 29 13 LYS A 4 ? ? -108.57 40.52 30 13 LYS A 12 ? ? -104.11 -70.83 31 13 ARG A 18 ? ? -108.63 -73.07 32 14 LYS A 4 ? ? -108.45 40.66 33 14 LYS A 12 ? ? -104.74 -70.82 34 14 ARG A 18 ? ? -83.64 -72.99 35 15 LEU A 2 ? ? 58.88 71.27 36 15 LYS A 12 ? ? -76.50 -71.08 37 15 ARG A 18 ? ? -99.55 -73.07 38 16 LYS A 12 ? ? -120.26 -77.67 39 16 ARG A 18 ? ? -79.96 -73.07 40 17 LEU A 2 ? ? 62.95 160.69 41 17 PRO A 3 ? ? -69.80 -174.60 42 17 LYS A 12 ? ? -119.63 -77.76 43 17 ARG A 18 ? ? -102.44 -73.06 44 18 PRO A 3 ? ? -69.80 -171.63 45 18 LYS A 12 ? ? -103.92 -70.77 46 18 ARG A 18 ? ? -79.62 -73.01 47 19 PRO A 3 ? ? -69.68 97.48 48 19 LYS A 12 ? ? -104.16 -70.85 49 19 ARG A 18 ? ? -51.89 -75.23 50 20 LYS A 12 ? ? -105.53 -70.89 51 20 ARG A 18 ? ? -64.48 -73.00 # _pdbx_nmr_ensemble.entry_id 5YKL _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5YKL _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'minimized average structure' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '2 mM pepride, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label NA _pdbx_nmr_sample_details.type 'lyophilized powder' _pdbx_nmr_sample_details.details ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component pepride _pdbx_nmr_exptl_sample.concentration 2 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units mmHg _pdbx_nmr_exptl_sample_conditions.pressure 76 _pdbx_nmr_exptl_sample_conditions.pH 6 _pdbx_nmr_exptl_sample_conditions.ionic_strength 2 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 'In LUV' _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 4 1 1 '2D 1H-1H TOCSY' 1 isotropic 5 1 1 '2D 1H-1H NOESY' 1 isotropic # _pdbx_nmr_refine.entry_id 5YKL _pdbx_nmr_refine.method 'distance geometry' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' XEASY ? 'Bartels et al.' 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 4 'peak picking' XEASY ? 'Bartels et al.' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 CYS N N N N 58 CYS CA C N R 59 CYS C C N N 60 CYS O O N N 61 CYS CB C N N 62 CYS SG S N N 63 CYS OXT O N N 64 CYS H H N N 65 CYS H2 H N N 66 CYS HA H N N 67 CYS HB2 H N N 68 CYS HB3 H N N 69 CYS HG H N N 70 CYS HXT H N N 71 HIS N N N N 72 HIS CA C N S 73 HIS C C N N 74 HIS O O N N 75 HIS CB C N N 76 HIS CG C Y N 77 HIS ND1 N Y N 78 HIS CD2 C Y N 79 HIS CE1 C Y N 80 HIS NE2 N Y N 81 HIS OXT O N N 82 HIS H H N N 83 HIS H2 H N N 84 HIS HA H N N 85 HIS HB2 H N N 86 HIS HB3 H N N 87 HIS HD1 H N N 88 HIS HD2 H N N 89 HIS HE1 H N N 90 HIS HE2 H N N 91 HIS HXT H N N 92 ILE N N N N 93 ILE CA C N S 94 ILE C C N N 95 ILE O O N N 96 ILE CB C N S 97 ILE CG1 C N N 98 ILE CG2 C N N 99 ILE CD1 C N N 100 ILE OXT O N N 101 ILE H H N N 102 ILE H2 H N N 103 ILE HA H N N 104 ILE HB H N N 105 ILE HG12 H N N 106 ILE HG13 H N N 107 ILE HG21 H N N 108 ILE HG22 H N N 109 ILE HG23 H N N 110 ILE HD11 H N N 111 ILE HD12 H N N 112 ILE HD13 H N N 113 ILE HXT H N N 114 LEU N N N N 115 LEU CA C N S 116 LEU C C N N 117 LEU O O N N 118 LEU CB C N N 119 LEU CG C N N 120 LEU CD1 C N N 121 LEU CD2 C N N 122 LEU OXT O N N 123 LEU H H N N 124 LEU H2 H N N 125 LEU HA H N N 126 LEU HB2 H N N 127 LEU HB3 H N N 128 LEU HG H N N 129 LEU HD11 H N N 130 LEU HD12 H N N 131 LEU HD13 H N N 132 LEU HD21 H N N 133 LEU HD22 H N N 134 LEU HD23 H N N 135 LEU HXT H N N 136 LYS N N N N 137 LYS CA C N S 138 LYS C C N N 139 LYS O O N N 140 LYS CB C N N 141 LYS CG C N N 142 LYS CD C N N 143 LYS CE C N N 144 LYS NZ N N N 145 LYS OXT O N N 146 LYS H H N N 147 LYS H2 H N N 148 LYS HA H N N 149 LYS HB2 H N N 150 LYS HB3 H N N 151 LYS HG2 H N N 152 LYS HG3 H N N 153 LYS HD2 H N N 154 LYS HD3 H N N 155 LYS HE2 H N N 156 LYS HE3 H N N 157 LYS HZ1 H N N 158 LYS HZ2 H N N 159 LYS HZ3 H N N 160 LYS HXT H N N 161 MET N N N N 162 MET CA C N S 163 MET C C N N 164 MET O O N N 165 MET CB C N N 166 MET CG C N N 167 MET SD S N N 168 MET CE C N N 169 MET OXT O N N 170 MET H H N N 171 MET H2 H N N 172 MET HA H N N 173 MET HB2 H N N 174 MET HB3 H N N 175 MET HG2 H N N 176 MET HG3 H N N 177 MET HE1 H N N 178 MET HE2 H N N 179 MET HE3 H N N 180 MET HXT H N N 181 PHE N N N N 182 PHE CA C N S 183 PHE C C N N 184 PHE O O N N 185 PHE CB C N N 186 PHE CG C Y N 187 PHE CD1 C Y N 188 PHE CD2 C Y N 189 PHE CE1 C Y N 190 PHE CE2 C Y N 191 PHE CZ C Y N 192 PHE OXT O N N 193 PHE H H N N 194 PHE H2 H N N 195 PHE HA H N N 196 PHE HB2 H N N 197 PHE HB3 H N N 198 PHE HD1 H N N 199 PHE HD2 H N N 200 PHE HE1 H N N 201 PHE HE2 H N N 202 PHE HZ H N N 203 PHE HXT H N N 204 PRO N N N N 205 PRO CA C N S 206 PRO C C N N 207 PRO O O N N 208 PRO CB C N N 209 PRO CG C N N 210 PRO CD C N N 211 PRO OXT O N N 212 PRO H H N N 213 PRO HA H N N 214 PRO HB2 H N N 215 PRO HB3 H N N 216 PRO HG2 H N N 217 PRO HG3 H N N 218 PRO HD2 H N N 219 PRO HD3 H N N 220 PRO HXT H N N 221 THR N N N N 222 THR CA C N S 223 THR C C N N 224 THR O O N N 225 THR CB C N R 226 THR OG1 O N N 227 THR CG2 C N N 228 THR OXT O N N 229 THR H H N N 230 THR H2 H N N 231 THR HA H N N 232 THR HB H N N 233 THR HG1 H N N 234 THR HG21 H N N 235 THR HG22 H N N 236 THR HG23 H N N 237 THR HXT H N N 238 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 CYS N CA sing N N 55 CYS N H sing N N 56 CYS N H2 sing N N 57 CYS CA C sing N N 58 CYS CA CB sing N N 59 CYS CA HA sing N N 60 CYS C O doub N N 61 CYS C OXT sing N N 62 CYS CB SG sing N N 63 CYS CB HB2 sing N N 64 CYS CB HB3 sing N N 65 CYS SG HG sing N N 66 CYS OXT HXT sing N N 67 HIS N CA sing N N 68 HIS N H sing N N 69 HIS N H2 sing N N 70 HIS CA C sing N N 71 HIS CA CB sing N N 72 HIS CA HA sing N N 73 HIS C O doub N N 74 HIS C OXT sing N N 75 HIS CB CG sing N N 76 HIS CB HB2 sing N N 77 HIS CB HB3 sing N N 78 HIS CG ND1 sing Y N 79 HIS CG CD2 doub Y N 80 HIS ND1 CE1 doub Y N 81 HIS ND1 HD1 sing N N 82 HIS CD2 NE2 sing Y N 83 HIS CD2 HD2 sing N N 84 HIS CE1 NE2 sing Y N 85 HIS CE1 HE1 sing N N 86 HIS NE2 HE2 sing N N 87 HIS OXT HXT sing N N 88 ILE N CA sing N N 89 ILE N H sing N N 90 ILE N H2 sing N N 91 ILE CA C sing N N 92 ILE CA CB sing N N 93 ILE CA HA sing N N 94 ILE C O doub N N 95 ILE C OXT sing N N 96 ILE CB CG1 sing N N 97 ILE CB CG2 sing N N 98 ILE CB HB sing N N 99 ILE CG1 CD1 sing N N 100 ILE CG1 HG12 sing N N 101 ILE CG1 HG13 sing N N 102 ILE CG2 HG21 sing N N 103 ILE CG2 HG22 sing N N 104 ILE CG2 HG23 sing N N 105 ILE CD1 HD11 sing N N 106 ILE CD1 HD12 sing N N 107 ILE CD1 HD13 sing N N 108 ILE OXT HXT sing N N 109 LEU N CA sing N N 110 LEU N H sing N N 111 LEU N H2 sing N N 112 LEU CA C sing N N 113 LEU CA CB sing N N 114 LEU CA HA sing N N 115 LEU C O doub N N 116 LEU C OXT sing N N 117 LEU CB CG sing N N 118 LEU CB HB2 sing N N 119 LEU CB HB3 sing N N 120 LEU CG CD1 sing N N 121 LEU CG CD2 sing N N 122 LEU CG HG sing N N 123 LEU CD1 HD11 sing N N 124 LEU CD1 HD12 sing N N 125 LEU CD1 HD13 sing N N 126 LEU CD2 HD21 sing N N 127 LEU CD2 HD22 sing N N 128 LEU CD2 HD23 sing N N 129 LEU OXT HXT sing N N 130 LYS N CA sing N N 131 LYS N H sing N N 132 LYS N H2 sing N N 133 LYS CA C sing N N 134 LYS CA CB sing N N 135 LYS CA HA sing N N 136 LYS C O doub N N 137 LYS C OXT sing N N 138 LYS CB CG sing N N 139 LYS CB HB2 sing N N 140 LYS CB HB3 sing N N 141 LYS CG CD sing N N 142 LYS CG HG2 sing N N 143 LYS CG HG3 sing N N 144 LYS CD CE sing N N 145 LYS CD HD2 sing N N 146 LYS CD HD3 sing N N 147 LYS CE NZ sing N N 148 LYS CE HE2 sing N N 149 LYS CE HE3 sing N N 150 LYS NZ HZ1 sing N N 151 LYS NZ HZ2 sing N N 152 LYS NZ HZ3 sing N N 153 LYS OXT HXT sing N N 154 MET N CA sing N N 155 MET N H sing N N 156 MET N H2 sing N N 157 MET CA C sing N N 158 MET CA CB sing N N 159 MET CA HA sing N N 160 MET C O doub N N 161 MET C OXT sing N N 162 MET CB CG sing N N 163 MET CB HB2 sing N N 164 MET CB HB3 sing N N 165 MET CG SD sing N N 166 MET CG HG2 sing N N 167 MET CG HG3 sing N N 168 MET SD CE sing N N 169 MET CE HE1 sing N N 170 MET CE HE2 sing N N 171 MET CE HE3 sing N N 172 MET OXT HXT sing N N 173 PHE N CA sing N N 174 PHE N H sing N N 175 PHE N H2 sing N N 176 PHE CA C sing N N 177 PHE CA CB sing N N 178 PHE CA HA sing N N 179 PHE C O doub N N 180 PHE C OXT sing N N 181 PHE CB CG sing N N 182 PHE CB HB2 sing N N 183 PHE CB HB3 sing N N 184 PHE CG CD1 doub Y N 185 PHE CG CD2 sing Y N 186 PHE CD1 CE1 sing Y N 187 PHE CD1 HD1 sing N N 188 PHE CD2 CE2 doub Y N 189 PHE CD2 HD2 sing N N 190 PHE CE1 CZ doub Y N 191 PHE CE1 HE1 sing N N 192 PHE CE2 CZ sing Y N 193 PHE CE2 HE2 sing N N 194 PHE CZ HZ sing N N 195 PHE OXT HXT sing N N 196 PRO N CA sing N N 197 PRO N CD sing N N 198 PRO N H sing N N 199 PRO CA C sing N N 200 PRO CA CB sing N N 201 PRO CA HA sing N N 202 PRO C O doub N N 203 PRO C OXT sing N N 204 PRO CB CG sing N N 205 PRO CB HB2 sing N N 206 PRO CB HB3 sing N N 207 PRO CG CD sing N N 208 PRO CG HG2 sing N N 209 PRO CG HG3 sing N N 210 PRO CD HD2 sing N N 211 PRO CD HD3 sing N N 212 PRO OXT HXT sing N N 213 THR N CA sing N N 214 THR N H sing N N 215 THR N H2 sing N N 216 THR CA C sing N N 217 THR CA CB sing N N 218 THR CA HA sing N N 219 THR C O doub N N 220 THR C OXT sing N N 221 THR CB OG1 sing N N 222 THR CB CG2 sing N N 223 THR CB HB sing N N 224 THR OG1 HG1 sing N N 225 THR CG2 HG21 sing N N 226 THR CG2 HG22 sing N N 227 THR CG2 HG23 sing N N 228 THR OXT HXT sing N N 229 # _pdbx_audit_support.funding_organization DST _pdbx_audit_support.country India _pdbx_audit_support.grant_number DST1028 _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 5YKL _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_