HEADER ANTIMICROBIAL PROTEIN 15-OCT-17 5YKQ TITLE DESIGNED PEPTIDE CAY1 FROM ODORRANA ANDERSONII SKIN SECRETION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DESIGNED CAY1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ODORRANA ANDERSONII; SOURCE 4 ORGANISM_TAXID: 369514 KEYWDS CYANA 2.1, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR I.PAL,H.S.ATREYA,A.BHUNIA REVDAT 3 14-JUN-23 5YKQ 1 REMARK REVDAT 2 27-MAR-19 5YKQ 1 JRNL REVDAT 1 01-NOV-17 5YKQ 0 JRNL AUTH I.PAL,D.BHATTACHARYYA,R.K.KAR,D.ZARENA,A.BHUNIA,H.S.ATREYA JRNL TITL A PEPTIDE-NANOPARTICLE SYSTEM WITH IMPROVED EFFICACY AGAINST JRNL TITL 2 MULTIDRUG RESISTANT BACTERIA. JRNL REF SCI REP V. 9 4485 2019 JRNL REFN ESSN 2045-2322 JRNL PMID 30872680 JRNL DOI 10.1038/S41598-019-41005-7 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5YKQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1300005452. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 2 REMARK 210 PRESSURE : 76 MMHG REMARK 210 SAMPLE CONTENTS : 2 MM PEPTIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, XEASY REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 13 -77.63 -119.42 REMARK 500 2 LYS A 13 -70.85 -105.36 REMARK 500 3 PHE A 2 139.12 180.00 REMARK 500 3 LEU A 3 160.66 63.04 REMARK 500 3 LYS A 13 -70.83 -104.09 REMARK 500 4 LEU A 3 160.72 63.03 REMARK 500 4 LYS A 13 -70.80 -103.88 REMARK 500 5 PHE A 2 -169.28 50.84 REMARK 500 5 LEU A 3 160.71 63.24 REMARK 500 5 LYS A 13 -77.63 -119.51 REMARK 500 6 LYS A 13 -77.67 -119.61 REMARK 500 7 PHE A 2 -169.18 50.76 REMARK 500 7 LYS A 13 -70.82 -104.83 REMARK 500 8 LYS A 5 40.61 -108.69 REMARK 500 8 LYS A 13 -77.77 -119.60 REMARK 500 9 PHE A 2 172.46 178.77 REMARK 500 9 LEU A 3 71.07 62.04 REMARK 500 9 LYS A 13 -77.65 -119.59 REMARK 500 10 LEU A 3 70.55 54.38 REMARK 500 10 LYS A 5 40.55 -108.61 REMARK 500 10 LYS A 13 -70.78 -104.18 REMARK 500 11 PHE A 2 174.86 66.55 REMARK 500 11 PRO A 4 -173.25 -69.74 REMARK 500 11 LYS A 13 -70.86 -104.14 REMARK 500 12 PHE A 2 152.49 66.15 REMARK 500 12 LEU A 3 160.62 63.12 REMARK 500 12 LYS A 13 -77.75 -119.74 REMARK 500 13 PHE A 2 161.50 66.62 REMARK 500 13 LEU A 3 71.73 55.50 REMARK 500 13 LYS A 13 -77.66 -120.22 REMARK 500 14 PHE A 2 139.38 179.94 REMARK 500 14 LYS A 13 -77.69 -119.80 REMARK 500 15 LEU A 3 159.66 61.03 REMARK 500 15 LYS A 5 40.53 -108.53 REMARK 500 15 LYS A 13 -70.79 -104.01 REMARK 500 16 PHE A 2 157.64 179.95 REMARK 500 16 LEU A 3 71.69 54.68 REMARK 500 16 LYS A 5 40.70 -108.67 REMARK 500 16 LYS A 13 -72.15 -120.27 REMARK 500 17 PHE A 2 20.94 -159.58 REMARK 500 17 LYS A 13 -77.68 -119.57 REMARK 500 18 PHE A 2 164.05 66.23 REMARK 500 18 LEU A 3 160.67 63.06 REMARK 500 18 LYS A 13 -70.81 -104.55 REMARK 500 19 PHE A 2 -169.24 50.84 REMARK 500 19 PRO A 4 87.48 -69.74 REMARK 500 19 LYS A 13 -78.61 -120.21 REMARK 500 20 LYS A 13 -70.78 -104.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36126 RELATED DB: BMRB REMARK 900 CAY1 DBREF 5YKQ A 1 19 PDB 5YKQ 5YKQ 1 19 SEQRES 1 A 19 CYS PHE LEU PRO LYS LEU PHE ALA LYS ILE THR LYS LYS SEQRES 2 A 19 ASN MET ALA HIS ILE ARG HELIX 1 AA1 LYS A 13 ILE A 18 1 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1