data_5YL6 # _entry.id 5YL6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5YL6 pdb_00005yl6 10.2210/pdb5yl6/pdb WWPDB D_1300005481 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5YL6 _pdbx_database_status.recvd_initial_deposition_date 2017-10-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wang, J.' 1 ? 'Gao, Y.X.' 2 ? 'Guo, G.R.' 3 ? 'Zhu, Z.L.' 4 ? 'Teng, M.K.' 5 ? 'Niu, L.W.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'to be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of Ofd2 in complex with 2OG from Schizosaccharomyces pombe' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, J.' 1 ? primary 'Gao, Y.X.' 2 ? primary 'Guo, G.R.' 3 ? primary 'Zhu, Z.L.' 4 ? primary 'Niu, L.W.' 5 ? primary 'Teng, M.K.' 6 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5YL6 _cell.details ? _cell.formula_units_Z ? _cell.length_a 71.114 _cell.length_a_esd ? _cell.length_b 80.312 _cell.length_b_esd ? _cell.length_c 82.607 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YL6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein P8A3.02c' 21233.268 1 ? L86A,I88L ? ? 2 non-polymer syn 'FE (III) ION' 55.845 1 ? ? ? ? 3 non-polymer syn '2-OXOGLUTARIC ACID' 146.098 1 ? ? ? ? 4 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 5 water nat water 18.015 116 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '2OG(2-oxoglutarate)-iron(Fe(II)) dependent dioxygenase Ofd2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DFENWTVVPVETIEGINYYPNCLPESVQRNLINNVPKELLSIYGSGKQSHAYLPFPAHINCLNDYIPSDFKQRLWKGQDA EAIIMQVYNPGDGIIPHKDLEMFGDGVAIFSFLSNTTMIFTHPELKLKSKIRLEKGSLLLMSGTARYDWFHEIPFRAGDW VMNDGEEKWVSRSQRLSVTMRRII ; _entity_poly.pdbx_seq_one_letter_code_can ;DFENWTVVPVETIEGINYYPNCLPESVQRNLINNVPKELLSIYGSGKQSHAYLPFPAHINCLNDYIPSDFKQRLWKGQDA EAIIMQVYNPGDGIIPHKDLEMFGDGVAIFSFLSNTTMIFTHPELKLKSKIRLEKGSLLLMSGTARYDWFHEIPFRAGDW VMNDGEEKWVSRSQRLSVTMRRII ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 PHE n 1 3 GLU n 1 4 ASN n 1 5 TRP n 1 6 THR n 1 7 VAL n 1 8 VAL n 1 9 PRO n 1 10 VAL n 1 11 GLU n 1 12 THR n 1 13 ILE n 1 14 GLU n 1 15 GLY n 1 16 ILE n 1 17 ASN n 1 18 TYR n 1 19 TYR n 1 20 PRO n 1 21 ASN n 1 22 CYS n 1 23 LEU n 1 24 PRO n 1 25 GLU n 1 26 SER n 1 27 VAL n 1 28 GLN n 1 29 ARG n 1 30 ASN n 1 31 LEU n 1 32 ILE n 1 33 ASN n 1 34 ASN n 1 35 VAL n 1 36 PRO n 1 37 LYS n 1 38 GLU n 1 39 LEU n 1 40 LEU n 1 41 SER n 1 42 ILE n 1 43 TYR n 1 44 GLY n 1 45 SER n 1 46 GLY n 1 47 LYS n 1 48 GLN n 1 49 SER n 1 50 HIS n 1 51 ALA n 1 52 TYR n 1 53 LEU n 1 54 PRO n 1 55 PHE n 1 56 PRO n 1 57 ALA n 1 58 HIS n 1 59 ILE n 1 60 ASN n 1 61 CYS n 1 62 LEU n 1 63 ASN n 1 64 ASP n 1 65 TYR n 1 66 ILE n 1 67 PRO n 1 68 SER n 1 69 ASP n 1 70 PHE n 1 71 LYS n 1 72 GLN n 1 73 ARG n 1 74 LEU n 1 75 TRP n 1 76 LYS n 1 77 GLY n 1 78 GLN n 1 79 ASP n 1 80 ALA n 1 81 GLU n 1 82 ALA n 1 83 ILE n 1 84 ILE n 1 85 MET n 1 86 GLN n 1 87 VAL n 1 88 TYR n 1 89 ASN n 1 90 PRO n 1 91 GLY n 1 92 ASP n 1 93 GLY n 1 94 ILE n 1 95 ILE n 1 96 PRO n 1 97 HIS n 1 98 LYS n 1 99 ASP n 1 100 LEU n 1 101 GLU n 1 102 MET n 1 103 PHE n 1 104 GLY n 1 105 ASP n 1 106 GLY n 1 107 VAL n 1 108 ALA n 1 109 ILE n 1 110 PHE n 1 111 SER n 1 112 PHE n 1 113 LEU n 1 114 SER n 1 115 ASN n 1 116 THR n 1 117 THR n 1 118 MET n 1 119 ILE n 1 120 PHE n 1 121 THR n 1 122 HIS n 1 123 PRO n 1 124 GLU n 1 125 LEU n 1 126 LYS n 1 127 LEU n 1 128 LYS n 1 129 SER n 1 130 LYS n 1 131 ILE n 1 132 ARG n 1 133 LEU n 1 134 GLU n 1 135 LYS n 1 136 GLY n 1 137 SER n 1 138 LEU n 1 139 LEU n 1 140 LEU n 1 141 MET n 1 142 SER n 1 143 GLY n 1 144 THR n 1 145 ALA n 1 146 ARG n 1 147 TYR n 1 148 ASP n 1 149 TRP n 1 150 PHE n 1 151 HIS n 1 152 GLU n 1 153 ILE n 1 154 PRO n 1 155 PHE n 1 156 ARG n 1 157 ALA n 1 158 GLY n 1 159 ASP n 1 160 TRP n 1 161 VAL n 1 162 MET n 1 163 ASN n 1 164 ASP n 1 165 GLY n 1 166 GLU n 1 167 GLU n 1 168 LYS n 1 169 TRP n 1 170 VAL n 1 171 SER n 1 172 ARG n 1 173 SER n 1 174 GLN n 1 175 ARG n 1 176 LEU n 1 177 SER n 1 178 VAL n 1 179 THR n 1 180 MET n 1 181 ARG n 1 182 ARG n 1 183 ILE n 1 184 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 184 _entity_src_gen.gene_src_common_name 'Fission yeast' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SPAP8A3.02c _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain '972 / ATCC 24843' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Schizosaccharomyces pombe (strain 972 / ATCC 24843)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 284812 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YLW2_SCHPO _struct_ref.pdbx_db_accession Q9UT12 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DFENWTVVPVETIEGINYYPNCLPESVQRNLINNVPKELLSIYGSGKQSHLYIPFPAHINCLNDYIPSDFKQRLWKGQDA EAIIMQVYNPGDGIIPHKDLEMFGDGVAIFSFLSNTTMIFTHPELKLKSKIRLEKGSLLLMSGTARYDWFHEIPFRAGDW VMNDGEEKWVSRSQRLSVTMRRII ; _struct_ref.pdbx_align_begin 36 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5YL6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 184 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9UT12 _struct_ref_seq.db_align_beg 36 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 219 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 36 _struct_ref_seq.pdbx_auth_seq_align_end 219 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5YL6 ALA A 51 ? UNP Q9UT12 LEU 86 'engineered mutation' 86 1 1 5YL6 LEU A 53 ? UNP Q9UT12 ILE 88 'engineered mutation' 88 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 AKG non-polymer . '2-OXOGLUTARIC ACID' ? 'C5 H6 O5' 146.098 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FE non-polymer . 'FE (III) ION' ? 'Fe 3' 55.845 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5YL6 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.78 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.71 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '18% MPEG 5000, 0.1M HEPES, pH 7.4' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-11-22 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9791 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5YL6 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 57.58 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15373 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.3 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 2.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 3.8500 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] -3.4700 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.3800 _refine.B_iso_max 87.310 _refine.B_iso_mean 42.1050 _refine.B_iso_min 24.320 _refine.correlation_coeff_Fo_to_Fc 0.9570 _refine.correlation_coeff_Fo_to_Fc_free 0.9400 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5YL6 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0000 _refine.ls_d_res_low 57.5800 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15373 _refine.ls_number_reflns_R_free 813 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.2300 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2026 _refine.ls_R_factor_R_free 0.2465 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2002 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3THP _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1750 _refine.pdbx_overall_ESU_R_Free 0.1640 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 5.4370 _refine.overall_SU_ML 0.1440 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.0000 _refine_hist.d_res_low 57.5800 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 116 _refine_hist.number_atoms_total 1626 _refine_hist.pdbx_number_residues_total 184 _refine_hist.pdbx_B_iso_mean_ligand 48.91 _refine_hist.pdbx_B_iso_mean_solvent 45.69 _refine_hist.pdbx_number_atoms_protein 1495 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 0.019 1548 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 1455 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.091 1.955 2097 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.600 3.000 3352 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.289 5.000 183 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 39.005 24.054 74 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 16.259 15.000 264 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 19.159 15.000 9 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.075 0.200 221 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.012 0.021 1742 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 365 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.0020 _refine_ls_shell.d_res_low 2.0540 _refine_ls_shell.number_reflns_all 1123 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.number_reflns_R_work 1058 _refine_ls_shell.percent_reflns_obs 92.7300 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.4040 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2880 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5YL6 _struct.title 'Crystal structure of Ofd2 in complex with 2OG from Schizosaccharomyces pombe' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5YL6 _struct_keywords.text 'beta barrel, OXIDOREDUCTASE' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 9 ? ILE A 13 ? PRO A 44 ILE A 48 5 ? 5 HELX_P HELX_P2 AA2 PRO A 24 ? VAL A 35 ? PRO A 59 VAL A 70 1 ? 12 HELX_P HELX_P3 AA3 PRO A 36 ? SER A 41 ? PRO A 71 SER A 76 5 ? 6 HELX_P HELX_P4 AA4 PRO A 56 ? CYS A 61 ? PRO A 91 CYS A 96 1 ? 6 HELX_P HELX_P5 AA5 LEU A 62 ? ILE A 66 ? LEU A 97 ILE A 101 5 ? 5 HELX_P HELX_P6 AA6 PRO A 67 ? LYS A 76 ? PRO A 102 LYS A 111 1 ? 10 HELX_P HELX_P7 AA7 LEU A 100 ? GLY A 104 ? LEU A 135 GLY A 139 5 ? 5 HELX_P HELX_P8 AA8 GLY A 143 ? ASP A 148 ? GLY A 178 ASP A 183 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 97 NE2 ? ? ? 1_555 B FE . FE ? ? A HIS 132 A FE 301 1_555 ? ? ? ? ? ? ? 2.162 ? ? metalc2 metalc ? ? A ASP 99 OD1 ? ? ? 1_555 B FE . FE ? ? A ASP 134 A FE 301 1_555 ? ? ? ? ? ? ? 2.133 ? ? metalc3 metalc ? ? A HIS 151 NE2 ? ? ? 1_555 B FE . FE ? ? A HIS 186 A FE 301 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc4 metalc ? ? B FE . FE ? ? ? 1_555 C AKG . O2 ? ? A FE 301 A AKG 302 1_555 ? ? ? ? ? ? ? 2.098 ? ? metalc5 metalc ? ? B FE . FE ? ? ? 1_555 C AKG . O5 ? ? A FE 301 A AKG 302 1_555 ? ? ? ? ? ? ? 2.272 ? ? metalc6 metalc ? ? B FE . FE ? ? ? 1_555 E HOH . O ? ? A FE 301 A HOH 425 1_555 ? ? ? ? ? ? ? 2.180 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 53 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 88 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 54 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 89 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 15.17 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 6 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 6 ? VAL A 7 ? THR A 41 VAL A 42 AA1 2 LEU A 127 ? LEU A 133 ? LEU A 162 LEU A 168 AA1 3 THR A 116 ? HIS A 122 ? THR A 151 HIS A 157 AA1 4 PHE A 150 ? ILE A 153 ? PHE A 185 ILE A 188 AA1 5 ILE A 94 ? HIS A 97 ? ILE A 129 HIS A 132 AA2 1 ILE A 16 ? TYR A 19 ? ILE A 51 TYR A 54 AA2 2 LEU A 138 ? MET A 141 ? LEU A 173 MET A 176 AA2 3 VAL A 107 ? PHE A 112 ? VAL A 142 PHE A 147 AA2 4 ARG A 175 ? ARG A 181 ? ARG A 210 ARG A 216 AA2 5 ALA A 82 ? TYR A 88 ? ALA A 117 TYR A 123 AA2 6 GLN A 48 ? TYR A 52 ? GLN A 83 TYR A 87 AA3 1 GLY A 158 ? ASN A 163 ? GLY A 193 ASN A 198 AA3 2 GLU A 166 ? SER A 171 ? GLU A 201 SER A 206 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 6 ? N THR A 41 O LYS A 128 ? O LYS A 163 AA1 2 3 O SER A 129 ? O SER A 164 N PHE A 120 ? N PHE A 155 AA1 3 4 N THR A 121 ? N THR A 156 O PHE A 150 ? O PHE A 185 AA1 4 5 O HIS A 151 ? O HIS A 186 N HIS A 97 ? N HIS A 132 AA2 1 2 N ASN A 17 ? N ASN A 52 O LEU A 140 ? O LEU A 175 AA2 2 3 O LEU A 139 ? O LEU A 174 N ILE A 109 ? N ILE A 144 AA2 3 4 N ALA A 108 ? N ALA A 143 O MET A 180 ? O MET A 215 AA2 4 5 O ARG A 175 ? O ARG A 210 N TYR A 88 ? N TYR A 123 AA2 5 6 O MET A 85 ? O MET A 120 N SER A 49 ? N SER A 84 AA3 1 2 N ASN A 163 ? N ASN A 198 O GLU A 166 ? O GLU A 201 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FE 301 ? 5 'binding site for residue FE A 301' AC2 Software A AKG 302 ? 12 'binding site for residue AKG A 302' AC3 Software A ACT 303 ? 5 'binding site for residue ACT A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 97 ? HIS A 132 . ? 1_555 ? 2 AC1 5 ASP A 99 ? ASP A 134 . ? 1_555 ? 3 AC1 5 HIS A 151 ? HIS A 186 . ? 1_555 ? 4 AC1 5 AKG C . ? AKG A 302 . ? 1_555 ? 5 AC1 5 HOH E . ? HOH A 425 . ? 1_555 ? 6 AC2 12 TYR A 88 ? TYR A 123 . ? 1_555 ? 7 AC2 12 HIS A 97 ? HIS A 132 . ? 1_555 ? 8 AC2 12 ASP A 99 ? ASP A 134 . ? 1_555 ? 9 AC2 12 ILE A 109 ? ILE A 144 . ? 1_555 ? 10 AC2 12 HIS A 151 ? HIS A 186 . ? 1_555 ? 11 AC2 12 ILE A 153 ? ILE A 188 . ? 1_555 ? 12 AC2 12 ARG A 175 ? ARG A 210 . ? 1_555 ? 13 AC2 12 SER A 177 ? SER A 212 . ? 1_555 ? 14 AC2 12 FE B . ? FE A 301 . ? 1_555 ? 15 AC2 12 HOH E . ? HOH A 402 . ? 1_555 ? 16 AC2 12 HOH E . ? HOH A 425 . ? 1_555 ? 17 AC2 12 HOH E . ? HOH A 483 . ? 1_555 ? 18 AC3 5 ASP A 99 ? ASP A 134 . ? 1_555 ? 19 AC3 5 LEU A 100 ? LEU A 135 . ? 1_555 ? 20 AC3 5 ARG A 181 ? ARG A 216 . ? 1_555 ? 21 AC3 5 HOH E . ? HOH A 402 . ? 1_555 ? 22 AC3 5 HOH E . ? HOH A 480 . ? 1_555 ? # _atom_sites.entry_id 5YL6 _atom_sites.fract_transf_matrix[1][1] 0.014062 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012451 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012106 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 36 36 ASP ASP A . n A 1 2 PHE 2 37 37 PHE PHE A . n A 1 3 GLU 3 38 38 GLU GLU A . n A 1 4 ASN 4 39 39 ASN ASN A . n A 1 5 TRP 5 40 40 TRP TRP A . n A 1 6 THR 6 41 41 THR THR A . n A 1 7 VAL 7 42 42 VAL VAL A . n A 1 8 VAL 8 43 43 VAL VAL A . n A 1 9 PRO 9 44 44 PRO PRO A . n A 1 10 VAL 10 45 45 VAL VAL A . n A 1 11 GLU 11 46 46 GLU GLU A . n A 1 12 THR 12 47 47 THR THR A . n A 1 13 ILE 13 48 48 ILE ILE A . n A 1 14 GLU 14 49 49 GLU GLU A . n A 1 15 GLY 15 50 50 GLY GLY A . n A 1 16 ILE 16 51 51 ILE ILE A . n A 1 17 ASN 17 52 52 ASN ASN A . n A 1 18 TYR 18 53 53 TYR TYR A . n A 1 19 TYR 19 54 54 TYR TYR A . n A 1 20 PRO 20 55 55 PRO PRO A . n A 1 21 ASN 21 56 56 ASN ASN A . n A 1 22 CYS 22 57 57 CYS CYS A . n A 1 23 LEU 23 58 58 LEU LEU A . n A 1 24 PRO 24 59 59 PRO PRO A . n A 1 25 GLU 25 60 60 GLU GLU A . n A 1 26 SER 26 61 61 SER SER A . n A 1 27 VAL 27 62 62 VAL VAL A . n A 1 28 GLN 28 63 63 GLN GLN A . n A 1 29 ARG 29 64 64 ARG ARG A . n A 1 30 ASN 30 65 65 ASN ASN A . n A 1 31 LEU 31 66 66 LEU LEU A . n A 1 32 ILE 32 67 67 ILE ILE A . n A 1 33 ASN 33 68 68 ASN ASN A . n A 1 34 ASN 34 69 69 ASN ASN A . n A 1 35 VAL 35 70 70 VAL VAL A . n A 1 36 PRO 36 71 71 PRO PRO A . n A 1 37 LYS 37 72 72 LYS LYS A . n A 1 38 GLU 38 73 73 GLU GLU A . n A 1 39 LEU 39 74 74 LEU LEU A . n A 1 40 LEU 40 75 75 LEU LEU A . n A 1 41 SER 41 76 76 SER SER A . n A 1 42 ILE 42 77 77 ILE ILE A . n A 1 43 TYR 43 78 78 TYR TYR A . n A 1 44 GLY 44 79 79 GLY GLY A . n A 1 45 SER 45 80 80 SER SER A . n A 1 46 GLY 46 81 81 GLY GLY A . n A 1 47 LYS 47 82 82 LYS LYS A . n A 1 48 GLN 48 83 83 GLN GLN A . n A 1 49 SER 49 84 84 SER SER A . n A 1 50 HIS 50 85 85 HIS HIS A . n A 1 51 ALA 51 86 86 ALA ALA A . n A 1 52 TYR 52 87 87 TYR TYR A . n A 1 53 LEU 53 88 88 LEU LEU A . n A 1 54 PRO 54 89 89 PRO PRO A . n A 1 55 PHE 55 90 90 PHE PHE A . n A 1 56 PRO 56 91 91 PRO PRO A . n A 1 57 ALA 57 92 92 ALA ALA A . n A 1 58 HIS 58 93 93 HIS HIS A . n A 1 59 ILE 59 94 94 ILE ILE A . n A 1 60 ASN 60 95 95 ASN ASN A . n A 1 61 CYS 61 96 96 CYS CYS A . n A 1 62 LEU 62 97 97 LEU LEU A . n A 1 63 ASN 63 98 98 ASN ASN A . n A 1 64 ASP 64 99 99 ASP ASP A . n A 1 65 TYR 65 100 100 TYR TYR A . n A 1 66 ILE 66 101 101 ILE ILE A . n A 1 67 PRO 67 102 102 PRO PRO A . n A 1 68 SER 68 103 103 SER SER A . n A 1 69 ASP 69 104 104 ASP ASP A . n A 1 70 PHE 70 105 105 PHE PHE A . n A 1 71 LYS 71 106 106 LYS LYS A . n A 1 72 GLN 72 107 107 GLN GLN A . n A 1 73 ARG 73 108 108 ARG ARG A . n A 1 74 LEU 74 109 109 LEU LEU A . n A 1 75 TRP 75 110 110 TRP TRP A . n A 1 76 LYS 76 111 111 LYS LYS A . n A 1 77 GLY 77 112 112 GLY GLY A . n A 1 78 GLN 78 113 113 GLN GLN A . n A 1 79 ASP 79 114 114 ASP ASP A . n A 1 80 ALA 80 115 115 ALA ALA A . n A 1 81 GLU 81 116 116 GLU GLU A . n A 1 82 ALA 82 117 117 ALA ALA A . n A 1 83 ILE 83 118 118 ILE ILE A . n A 1 84 ILE 84 119 119 ILE ILE A . n A 1 85 MET 85 120 120 MET MET A . n A 1 86 GLN 86 121 121 GLN GLN A . n A 1 87 VAL 87 122 122 VAL VAL A . n A 1 88 TYR 88 123 123 TYR TYR A . n A 1 89 ASN 89 124 124 ASN ASN A . n A 1 90 PRO 90 125 125 PRO PRO A . n A 1 91 GLY 91 126 126 GLY GLY A . n A 1 92 ASP 92 127 127 ASP ASP A . n A 1 93 GLY 93 128 128 GLY GLY A . n A 1 94 ILE 94 129 129 ILE ILE A . n A 1 95 ILE 95 130 130 ILE ILE A . n A 1 96 PRO 96 131 131 PRO PRO A . n A 1 97 HIS 97 132 132 HIS HIS A . n A 1 98 LYS 98 133 133 LYS LYS A . n A 1 99 ASP 99 134 134 ASP ASP A . n A 1 100 LEU 100 135 135 LEU LEU A . n A 1 101 GLU 101 136 136 GLU GLU A . n A 1 102 MET 102 137 137 MET MET A . n A 1 103 PHE 103 138 138 PHE PHE A . n A 1 104 GLY 104 139 139 GLY GLY A . n A 1 105 ASP 105 140 140 ASP ASP A . n A 1 106 GLY 106 141 141 GLY GLY A . n A 1 107 VAL 107 142 142 VAL VAL A . n A 1 108 ALA 108 143 143 ALA ALA A . n A 1 109 ILE 109 144 144 ILE ILE A . n A 1 110 PHE 110 145 145 PHE PHE A . n A 1 111 SER 111 146 146 SER SER A . n A 1 112 PHE 112 147 147 PHE PHE A . n A 1 113 LEU 113 148 148 LEU LEU A . n A 1 114 SER 114 149 149 SER SER A . n A 1 115 ASN 115 150 150 ASN ASN A . n A 1 116 THR 116 151 151 THR THR A . n A 1 117 THR 117 152 152 THR THR A . n A 1 118 MET 118 153 153 MET MET A . n A 1 119 ILE 119 154 154 ILE ILE A . n A 1 120 PHE 120 155 155 PHE PHE A . n A 1 121 THR 121 156 156 THR THR A . n A 1 122 HIS 122 157 157 HIS HIS A . n A 1 123 PRO 123 158 158 PRO PRO A . n A 1 124 GLU 124 159 159 GLU GLU A . n A 1 125 LEU 125 160 160 LEU LEU A . n A 1 126 LYS 126 161 161 LYS LYS A . n A 1 127 LEU 127 162 162 LEU LEU A . n A 1 128 LYS 128 163 163 LYS LYS A . n A 1 129 SER 129 164 164 SER SER A . n A 1 130 LYS 130 165 165 LYS LYS A . n A 1 131 ILE 131 166 166 ILE ILE A . n A 1 132 ARG 132 167 167 ARG ARG A . n A 1 133 LEU 133 168 168 LEU LEU A . n A 1 134 GLU 134 169 169 GLU GLU A . n A 1 135 LYS 135 170 170 LYS LYS A . n A 1 136 GLY 136 171 171 GLY GLY A . n A 1 137 SER 137 172 172 SER SER A . n A 1 138 LEU 138 173 173 LEU LEU A . n A 1 139 LEU 139 174 174 LEU LEU A . n A 1 140 LEU 140 175 175 LEU LEU A . n A 1 141 MET 141 176 176 MET MET A . n A 1 142 SER 142 177 177 SER SER A . n A 1 143 GLY 143 178 178 GLY GLY A . n A 1 144 THR 144 179 179 THR THR A . n A 1 145 ALA 145 180 180 ALA ALA A . n A 1 146 ARG 146 181 181 ARG ARG A . n A 1 147 TYR 147 182 182 TYR TYR A . n A 1 148 ASP 148 183 183 ASP ASP A . n A 1 149 TRP 149 184 184 TRP TRP A . n A 1 150 PHE 150 185 185 PHE PHE A . n A 1 151 HIS 151 186 186 HIS HIS A . n A 1 152 GLU 152 187 187 GLU GLU A . n A 1 153 ILE 153 188 188 ILE ILE A . n A 1 154 PRO 154 189 189 PRO PRO A . n A 1 155 PHE 155 190 190 PHE PHE A . n A 1 156 ARG 156 191 191 ARG ARG A . n A 1 157 ALA 157 192 192 ALA ALA A . n A 1 158 GLY 158 193 193 GLY GLY A . n A 1 159 ASP 159 194 194 ASP ASP A . n A 1 160 TRP 160 195 195 TRP TRP A . n A 1 161 VAL 161 196 196 VAL VAL A . n A 1 162 MET 162 197 197 MET MET A . n A 1 163 ASN 163 198 198 ASN ASN A . n A 1 164 ASP 164 199 199 ASP ASP A . n A 1 165 GLY 165 200 200 GLY GLY A . n A 1 166 GLU 166 201 201 GLU GLU A . n A 1 167 GLU 167 202 202 GLU GLU A . n A 1 168 LYS 168 203 203 LYS LYS A . n A 1 169 TRP 169 204 204 TRP TRP A . n A 1 170 VAL 170 205 205 VAL VAL A . n A 1 171 SER 171 206 206 SER SER A . n A 1 172 ARG 172 207 207 ARG ARG A . n A 1 173 SER 173 208 208 SER SER A . n A 1 174 GLN 174 209 209 GLN GLN A . n A 1 175 ARG 175 210 210 ARG ARG A . n A 1 176 LEU 176 211 211 LEU LEU A . n A 1 177 SER 177 212 212 SER SER A . n A 1 178 VAL 178 213 213 VAL VAL A . n A 1 179 THR 179 214 214 THR THR A . n A 1 180 MET 180 215 215 MET MET A . n A 1 181 ARG 181 216 216 ARG ARG A . n A 1 182 ARG 182 217 217 ARG ARG A . n A 1 183 ILE 183 218 218 ILE ILE A . n A 1 184 ILE 184 219 219 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE 1 301 1 FE FE A . C 3 AKG 1 302 1 AKG AKG A . D 4 ACT 1 303 1 ACT ACT A . E 5 HOH 1 401 30 HOH HOH A . E 5 HOH 2 402 86 HOH HOH A . E 5 HOH 3 403 122 HOH HOH A . E 5 HOH 4 404 70 HOH HOH A . E 5 HOH 5 405 71 HOH HOH A . E 5 HOH 6 406 22 HOH HOH A . E 5 HOH 7 407 44 HOH HOH A . E 5 HOH 8 408 64 HOH HOH A . E 5 HOH 9 409 85 HOH HOH A . E 5 HOH 10 410 25 HOH HOH A . E 5 HOH 11 411 1 HOH HOH A . E 5 HOH 12 412 60 HOH HOH A . E 5 HOH 13 413 16 HOH HOH A . E 5 HOH 14 414 77 HOH HOH A . E 5 HOH 15 415 37 HOH HOH A . E 5 HOH 16 416 56 HOH HOH A . E 5 HOH 17 417 3 HOH HOH A . E 5 HOH 18 418 81 HOH HOH A . E 5 HOH 19 419 84 HOH HOH A . E 5 HOH 20 420 7 HOH HOH A . E 5 HOH 21 421 45 HOH HOH A . E 5 HOH 22 422 58 HOH HOH A . E 5 HOH 23 423 67 HOH HOH A . E 5 HOH 24 424 5 HOH HOH A . E 5 HOH 25 425 59 HOH HOH A . E 5 HOH 26 426 35 HOH HOH A . E 5 HOH 27 427 55 HOH HOH A . E 5 HOH 28 428 72 HOH HOH A . E 5 HOH 29 429 10 HOH HOH A . E 5 HOH 30 430 117 HOH HOH A . E 5 HOH 31 431 6 HOH HOH A . E 5 HOH 32 432 62 HOH HOH A . E 5 HOH 33 433 61 HOH HOH A . E 5 HOH 34 434 9 HOH HOH A . E 5 HOH 35 435 11 HOH HOH A . E 5 HOH 36 436 75 HOH HOH A . E 5 HOH 37 437 109 HOH HOH A . E 5 HOH 38 438 80 HOH HOH A . E 5 HOH 39 439 12 HOH HOH A . E 5 HOH 40 440 93 HOH HOH A . E 5 HOH 41 441 42 HOH HOH A . E 5 HOH 42 442 17 HOH HOH A . E 5 HOH 43 443 115 HOH HOH A . E 5 HOH 44 444 13 HOH HOH A . E 5 HOH 45 445 97 HOH HOH A . E 5 HOH 46 446 94 HOH HOH A . E 5 HOH 47 447 21 HOH HOH A . E 5 HOH 48 448 2 HOH HOH A . E 5 HOH 49 449 92 HOH HOH A . E 5 HOH 50 450 27 HOH HOH A . E 5 HOH 51 451 36 HOH HOH A . E 5 HOH 52 452 29 HOH HOH A . E 5 HOH 53 453 19 HOH HOH A . E 5 HOH 54 454 33 HOH HOH A . E 5 HOH 55 455 8 HOH HOH A . E 5 HOH 56 456 31 HOH HOH A . E 5 HOH 57 457 65 HOH HOH A . E 5 HOH 58 458 110 HOH HOH A . E 5 HOH 59 459 73 HOH HOH A . E 5 HOH 60 460 15 HOH HOH A . E 5 HOH 61 461 104 HOH HOH A . E 5 HOH 62 462 74 HOH HOH A . E 5 HOH 63 463 108 HOH HOH A . E 5 HOH 64 464 24 HOH HOH A . E 5 HOH 65 465 52 HOH HOH A . E 5 HOH 66 466 4 HOH HOH A . E 5 HOH 67 467 26 HOH HOH A . E 5 HOH 68 468 41 HOH HOH A . E 5 HOH 69 469 14 HOH HOH A . E 5 HOH 70 470 18 HOH HOH A . E 5 HOH 71 471 46 HOH HOH A . E 5 HOH 72 472 111 HOH HOH A . E 5 HOH 73 473 28 HOH HOH A . E 5 HOH 74 474 76 HOH HOH A . E 5 HOH 75 475 32 HOH HOH A . E 5 HOH 76 476 43 HOH HOH A . E 5 HOH 77 477 90 HOH HOH A . E 5 HOH 78 478 124 HOH HOH A . E 5 HOH 79 479 38 HOH HOH A . E 5 HOH 80 480 82 HOH HOH A . E 5 HOH 81 481 40 HOH HOH A . E 5 HOH 82 482 34 HOH HOH A . E 5 HOH 83 483 66 HOH HOH A . E 5 HOH 84 484 91 HOH HOH A . E 5 HOH 85 485 63 HOH HOH A . E 5 HOH 86 486 47 HOH HOH A . E 5 HOH 87 487 39 HOH HOH A . E 5 HOH 88 488 23 HOH HOH A . E 5 HOH 89 489 95 HOH HOH A . E 5 HOH 90 490 107 HOH HOH A . E 5 HOH 91 491 106 HOH HOH A . E 5 HOH 92 492 48 HOH HOH A . E 5 HOH 93 493 113 HOH HOH A . E 5 HOH 94 494 50 HOH HOH A . E 5 HOH 95 495 49 HOH HOH A . E 5 HOH 96 496 54 HOH HOH A . E 5 HOH 97 497 57 HOH HOH A . E 5 HOH 98 498 118 HOH HOH A . E 5 HOH 99 499 120 HOH HOH A . E 5 HOH 100 500 114 HOH HOH A . E 5 HOH 101 501 51 HOH HOH A . E 5 HOH 102 502 96 HOH HOH A . E 5 HOH 103 503 78 HOH HOH A . E 5 HOH 104 504 100 HOH HOH A . E 5 HOH 105 505 88 HOH HOH A . E 5 HOH 106 506 102 HOH HOH A . E 5 HOH 107 507 83 HOH HOH A . E 5 HOH 108 508 68 HOH HOH A . E 5 HOH 109 509 69 HOH HOH A . E 5 HOH 110 510 101 HOH HOH A . E 5 HOH 111 511 112 HOH HOH A . E 5 HOH 112 512 53 HOH HOH A . E 5 HOH 113 513 79 HOH HOH A . E 5 HOH 114 514 105 HOH HOH A . E 5 HOH 115 515 87 HOH HOH A . E 5 HOH 116 516 98 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 520 ? 1 MORE -14 ? 1 'SSA (A^2)' 9660 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 449 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 97 ? A HIS 132 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 OD1 ? A ASP 99 ? A ASP 134 ? 1_555 95.5 ? 2 NE2 ? A HIS 97 ? A HIS 132 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 NE2 ? A HIS 151 ? A HIS 186 ? 1_555 94.5 ? 3 OD1 ? A ASP 99 ? A ASP 134 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 NE2 ? A HIS 151 ? A HIS 186 ? 1_555 91.7 ? 4 NE2 ? A HIS 97 ? A HIS 132 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O2 ? C AKG . ? A AKG 302 ? 1_555 86.7 ? 5 OD1 ? A ASP 99 ? A ASP 134 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O2 ? C AKG . ? A AKG 302 ? 1_555 96.4 ? 6 NE2 ? A HIS 151 ? A HIS 186 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O2 ? C AKG . ? A AKG 302 ? 1_555 171.7 ? 7 NE2 ? A HIS 97 ? A HIS 132 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O5 ? C AKG . ? A AKG 302 ? 1_555 95.0 ? 8 OD1 ? A ASP 99 ? A ASP 134 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O5 ? C AKG . ? A AKG 302 ? 1_555 167.9 ? 9 NE2 ? A HIS 151 ? A HIS 186 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O5 ? C AKG . ? A AKG 302 ? 1_555 93.6 ? 10 O2 ? C AKG . ? A AKG 302 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O5 ? C AKG . ? A AKG 302 ? 1_555 78.2 ? 11 NE2 ? A HIS 97 ? A HIS 132 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O ? E HOH . ? A HOH 425 ? 1_555 175.5 ? 12 OD1 ? A ASP 99 ? A ASP 134 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O ? E HOH . ? A HOH 425 ? 1_555 87.8 ? 13 NE2 ? A HIS 151 ? A HIS 186 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O ? E HOH . ? A HOH 425 ? 1_555 88.4 ? 14 O2 ? C AKG . ? A AKG 302 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O ? E HOH . ? A HOH 425 ? 1_555 90.0 ? 15 O5 ? C AKG . ? A AKG 302 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O ? E HOH . ? A HOH 425 ? 1_555 81.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-06-12 2 'Structure model' 1 1 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0049 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 514 ? ? O A HOH 516 ? ? 2.13 2 1 O A HOH 488 ? ? O A HOH 498 ? ? 2.16 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LEU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 148 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 84.67 _pdbx_validate_torsion.psi -47.75 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 181 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.074 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 515 ? 6.13 . 2 1 O ? A HOH 516 ? 6.56 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 AKG C1 C N N 8 AKG O1 O N N 9 AKG O2 O N N 10 AKG C2 C N N 11 AKG O5 O N N 12 AKG C3 C N N 13 AKG C4 C N N 14 AKG C5 C N N 15 AKG O3 O N N 16 AKG O4 O N N 17 AKG HO2 H N N 18 AKG H31 H N N 19 AKG H32 H N N 20 AKG H41 H N N 21 AKG H42 H N N 22 AKG HO4 H N N 23 ALA N N N N 24 ALA CA C N S 25 ALA C C N N 26 ALA O O N N 27 ALA CB C N N 28 ALA OXT O N N 29 ALA H H N N 30 ALA H2 H N N 31 ALA HA H N N 32 ALA HB1 H N N 33 ALA HB2 H N N 34 ALA HB3 H N N 35 ALA HXT H N N 36 ARG N N N N 37 ARG CA C N S 38 ARG C C N N 39 ARG O O N N 40 ARG CB C N N 41 ARG CG C N N 42 ARG CD C N N 43 ARG NE N N N 44 ARG CZ C N N 45 ARG NH1 N N N 46 ARG NH2 N N N 47 ARG OXT O N N 48 ARG H H N N 49 ARG H2 H N N 50 ARG HA H N N 51 ARG HB2 H N N 52 ARG HB3 H N N 53 ARG HG2 H N N 54 ARG HG3 H N N 55 ARG HD2 H N N 56 ARG HD3 H N N 57 ARG HE H N N 58 ARG HH11 H N N 59 ARG HH12 H N N 60 ARG HH21 H N N 61 ARG HH22 H N N 62 ARG HXT H N N 63 ASN N N N N 64 ASN CA C N S 65 ASN C C N N 66 ASN O O N N 67 ASN CB C N N 68 ASN CG C N N 69 ASN OD1 O N N 70 ASN ND2 N N N 71 ASN OXT O N N 72 ASN H H N N 73 ASN H2 H N N 74 ASN HA H N N 75 ASN HB2 H N N 76 ASN HB3 H N N 77 ASN HD21 H N N 78 ASN HD22 H N N 79 ASN HXT H N N 80 ASP N N N N 81 ASP CA C N S 82 ASP C C N N 83 ASP O O N N 84 ASP CB C N N 85 ASP CG C N N 86 ASP OD1 O N N 87 ASP OD2 O N N 88 ASP OXT O N N 89 ASP H H N N 90 ASP H2 H N N 91 ASP HA H N N 92 ASP HB2 H N N 93 ASP HB3 H N N 94 ASP HD2 H N N 95 ASP HXT H N N 96 CYS N N N N 97 CYS CA C N R 98 CYS C C N N 99 CYS O O N N 100 CYS CB C N N 101 CYS SG S N N 102 CYS OXT O N N 103 CYS H H N N 104 CYS H2 H N N 105 CYS HA H N N 106 CYS HB2 H N N 107 CYS HB3 H N N 108 CYS HG H N N 109 CYS HXT H N N 110 FE FE FE N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 PHE N N N N 274 PHE CA C N S 275 PHE C C N N 276 PHE O O N N 277 PHE CB C N N 278 PHE CG C Y N 279 PHE CD1 C Y N 280 PHE CD2 C Y N 281 PHE CE1 C Y N 282 PHE CE2 C Y N 283 PHE CZ C Y N 284 PHE OXT O N N 285 PHE H H N N 286 PHE H2 H N N 287 PHE HA H N N 288 PHE HB2 H N N 289 PHE HB3 H N N 290 PHE HD1 H N N 291 PHE HD2 H N N 292 PHE HE1 H N N 293 PHE HE2 H N N 294 PHE HZ H N N 295 PHE HXT H N N 296 PRO N N N N 297 PRO CA C N S 298 PRO C C N N 299 PRO O O N N 300 PRO CB C N N 301 PRO CG C N N 302 PRO CD C N N 303 PRO OXT O N N 304 PRO H H N N 305 PRO HA H N N 306 PRO HB2 H N N 307 PRO HB3 H N N 308 PRO HG2 H N N 309 PRO HG3 H N N 310 PRO HD2 H N N 311 PRO HD3 H N N 312 PRO HXT H N N 313 SER N N N N 314 SER CA C N S 315 SER C C N N 316 SER O O N N 317 SER CB C N N 318 SER OG O N N 319 SER OXT O N N 320 SER H H N N 321 SER H2 H N N 322 SER HA H N N 323 SER HB2 H N N 324 SER HB3 H N N 325 SER HG H N N 326 SER HXT H N N 327 THR N N N N 328 THR CA C N S 329 THR C C N N 330 THR O O N N 331 THR CB C N R 332 THR OG1 O N N 333 THR CG2 C N N 334 THR OXT O N N 335 THR H H N N 336 THR H2 H N N 337 THR HA H N N 338 THR HB H N N 339 THR HG1 H N N 340 THR HG21 H N N 341 THR HG22 H N N 342 THR HG23 H N N 343 THR HXT H N N 344 TRP N N N N 345 TRP CA C N S 346 TRP C C N N 347 TRP O O N N 348 TRP CB C N N 349 TRP CG C Y N 350 TRP CD1 C Y N 351 TRP CD2 C Y N 352 TRP NE1 N Y N 353 TRP CE2 C Y N 354 TRP CE3 C Y N 355 TRP CZ2 C Y N 356 TRP CZ3 C Y N 357 TRP CH2 C Y N 358 TRP OXT O N N 359 TRP H H N N 360 TRP H2 H N N 361 TRP HA H N N 362 TRP HB2 H N N 363 TRP HB3 H N N 364 TRP HD1 H N N 365 TRP HE1 H N N 366 TRP HE3 H N N 367 TRP HZ2 H N N 368 TRP HZ3 H N N 369 TRP HH2 H N N 370 TRP HXT H N N 371 TYR N N N N 372 TYR CA C N S 373 TYR C C N N 374 TYR O O N N 375 TYR CB C N N 376 TYR CG C Y N 377 TYR CD1 C Y N 378 TYR CD2 C Y N 379 TYR CE1 C Y N 380 TYR CE2 C Y N 381 TYR CZ C Y N 382 TYR OH O N N 383 TYR OXT O N N 384 TYR H H N N 385 TYR H2 H N N 386 TYR HA H N N 387 TYR HB2 H N N 388 TYR HB3 H N N 389 TYR HD1 H N N 390 TYR HD2 H N N 391 TYR HE1 H N N 392 TYR HE2 H N N 393 TYR HH H N N 394 TYR HXT H N N 395 VAL N N N N 396 VAL CA C N S 397 VAL C C N N 398 VAL O O N N 399 VAL CB C N N 400 VAL CG1 C N N 401 VAL CG2 C N N 402 VAL OXT O N N 403 VAL H H N N 404 VAL H2 H N N 405 VAL HA H N N 406 VAL HB H N N 407 VAL HG11 H N N 408 VAL HG12 H N N 409 VAL HG13 H N N 410 VAL HG21 H N N 411 VAL HG22 H N N 412 VAL HG23 H N N 413 VAL HXT H N N 414 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 AKG C1 O1 doub N N 7 AKG C1 O2 sing N N 8 AKG C1 C2 sing N N 9 AKG O2 HO2 sing N N 10 AKG C2 O5 doub N N 11 AKG C2 C3 sing N N 12 AKG C3 C4 sing N N 13 AKG C3 H31 sing N N 14 AKG C3 H32 sing N N 15 AKG C4 C5 sing N N 16 AKG C4 H41 sing N N 17 AKG C4 H42 sing N N 18 AKG C5 O3 doub N N 19 AKG C5 O4 sing N N 20 AKG O4 HO4 sing N N 21 ALA N CA sing N N 22 ALA N H sing N N 23 ALA N H2 sing N N 24 ALA CA C sing N N 25 ALA CA CB sing N N 26 ALA CA HA sing N N 27 ALA C O doub N N 28 ALA C OXT sing N N 29 ALA CB HB1 sing N N 30 ALA CB HB2 sing N N 31 ALA CB HB3 sing N N 32 ALA OXT HXT sing N N 33 ARG N CA sing N N 34 ARG N H sing N N 35 ARG N H2 sing N N 36 ARG CA C sing N N 37 ARG CA CB sing N N 38 ARG CA HA sing N N 39 ARG C O doub N N 40 ARG C OXT sing N N 41 ARG CB CG sing N N 42 ARG CB HB2 sing N N 43 ARG CB HB3 sing N N 44 ARG CG CD sing N N 45 ARG CG HG2 sing N N 46 ARG CG HG3 sing N N 47 ARG CD NE sing N N 48 ARG CD HD2 sing N N 49 ARG CD HD3 sing N N 50 ARG NE CZ sing N N 51 ARG NE HE sing N N 52 ARG CZ NH1 sing N N 53 ARG CZ NH2 doub N N 54 ARG NH1 HH11 sing N N 55 ARG NH1 HH12 sing N N 56 ARG NH2 HH21 sing N N 57 ARG NH2 HH22 sing N N 58 ARG OXT HXT sing N N 59 ASN N CA sing N N 60 ASN N H sing N N 61 ASN N H2 sing N N 62 ASN CA C sing N N 63 ASN CA CB sing N N 64 ASN CA HA sing N N 65 ASN C O doub N N 66 ASN C OXT sing N N 67 ASN CB CG sing N N 68 ASN CB HB2 sing N N 69 ASN CB HB3 sing N N 70 ASN CG OD1 doub N N 71 ASN CG ND2 sing N N 72 ASN ND2 HD21 sing N N 73 ASN ND2 HD22 sing N N 74 ASN OXT HXT sing N N 75 ASP N CA sing N N 76 ASP N H sing N N 77 ASP N H2 sing N N 78 ASP CA C sing N N 79 ASP CA CB sing N N 80 ASP CA HA sing N N 81 ASP C O doub N N 82 ASP C OXT sing N N 83 ASP CB CG sing N N 84 ASP CB HB2 sing N N 85 ASP CB HB3 sing N N 86 ASP CG OD1 doub N N 87 ASP CG OD2 sing N N 88 ASP OD2 HD2 sing N N 89 ASP OXT HXT sing N N 90 CYS N CA sing N N 91 CYS N H sing N N 92 CYS N H2 sing N N 93 CYS CA C sing N N 94 CYS CA CB sing N N 95 CYS CA HA sing N N 96 CYS C O doub N N 97 CYS C OXT sing N N 98 CYS CB SG sing N N 99 CYS CB HB2 sing N N 100 CYS CB HB3 sing N N 101 CYS SG HG sing N N 102 CYS OXT HXT sing N N 103 GLN N CA sing N N 104 GLN N H sing N N 105 GLN N H2 sing N N 106 GLN CA C sing N N 107 GLN CA CB sing N N 108 GLN CA HA sing N N 109 GLN C O doub N N 110 GLN C OXT sing N N 111 GLN CB CG sing N N 112 GLN CB HB2 sing N N 113 GLN CB HB3 sing N N 114 GLN CG CD sing N N 115 GLN CG HG2 sing N N 116 GLN CG HG3 sing N N 117 GLN CD OE1 doub N N 118 GLN CD NE2 sing N N 119 GLN NE2 HE21 sing N N 120 GLN NE2 HE22 sing N N 121 GLN OXT HXT sing N N 122 GLU N CA sing N N 123 GLU N H sing N N 124 GLU N H2 sing N N 125 GLU CA C sing N N 126 GLU CA CB sing N N 127 GLU CA HA sing N N 128 GLU C O doub N N 129 GLU C OXT sing N N 130 GLU CB CG sing N N 131 GLU CB HB2 sing N N 132 GLU CB HB3 sing N N 133 GLU CG CD sing N N 134 GLU CG HG2 sing N N 135 GLU CG HG3 sing N N 136 GLU CD OE1 doub N N 137 GLU CD OE2 sing N N 138 GLU OE2 HE2 sing N N 139 GLU OXT HXT sing N N 140 GLY N CA sing N N 141 GLY N H sing N N 142 GLY N H2 sing N N 143 GLY CA C sing N N 144 GLY CA HA2 sing N N 145 GLY CA HA3 sing N N 146 GLY C O doub N N 147 GLY C OXT sing N N 148 GLY OXT HXT sing N N 149 HIS N CA sing N N 150 HIS N H sing N N 151 HIS N H2 sing N N 152 HIS CA C sing N N 153 HIS CA CB sing N N 154 HIS CA HA sing N N 155 HIS C O doub N N 156 HIS C OXT sing N N 157 HIS CB CG sing N N 158 HIS CB HB2 sing N N 159 HIS CB HB3 sing N N 160 HIS CG ND1 sing Y N 161 HIS CG CD2 doub Y N 162 HIS ND1 CE1 doub Y N 163 HIS ND1 HD1 sing N N 164 HIS CD2 NE2 sing Y N 165 HIS CD2 HD2 sing N N 166 HIS CE1 NE2 sing Y N 167 HIS CE1 HE1 sing N N 168 HIS NE2 HE2 sing N N 169 HIS OXT HXT sing N N 170 HOH O H1 sing N N 171 HOH O H2 sing N N 172 ILE N CA sing N N 173 ILE N H sing N N 174 ILE N H2 sing N N 175 ILE CA C sing N N 176 ILE CA CB sing N N 177 ILE CA HA sing N N 178 ILE C O doub N N 179 ILE C OXT sing N N 180 ILE CB CG1 sing N N 181 ILE CB CG2 sing N N 182 ILE CB HB sing N N 183 ILE CG1 CD1 sing N N 184 ILE CG1 HG12 sing N N 185 ILE CG1 HG13 sing N N 186 ILE CG2 HG21 sing N N 187 ILE CG2 HG22 sing N N 188 ILE CG2 HG23 sing N N 189 ILE CD1 HD11 sing N N 190 ILE CD1 HD12 sing N N 191 ILE CD1 HD13 sing N N 192 ILE OXT HXT sing N N 193 LEU N CA sing N N 194 LEU N H sing N N 195 LEU N H2 sing N N 196 LEU CA C sing N N 197 LEU CA CB sing N N 198 LEU CA HA sing N N 199 LEU C O doub N N 200 LEU C OXT sing N N 201 LEU CB CG sing N N 202 LEU CB HB2 sing N N 203 LEU CB HB3 sing N N 204 LEU CG CD1 sing N N 205 LEU CG CD2 sing N N 206 LEU CG HG sing N N 207 LEU CD1 HD11 sing N N 208 LEU CD1 HD12 sing N N 209 LEU CD1 HD13 sing N N 210 LEU CD2 HD21 sing N N 211 LEU CD2 HD22 sing N N 212 LEU CD2 HD23 sing N N 213 LEU OXT HXT sing N N 214 LYS N CA sing N N 215 LYS N H sing N N 216 LYS N H2 sing N N 217 LYS CA C sing N N 218 LYS CA CB sing N N 219 LYS CA HA sing N N 220 LYS C O doub N N 221 LYS C OXT sing N N 222 LYS CB CG sing N N 223 LYS CB HB2 sing N N 224 LYS CB HB3 sing N N 225 LYS CG CD sing N N 226 LYS CG HG2 sing N N 227 LYS CG HG3 sing N N 228 LYS CD CE sing N N 229 LYS CD HD2 sing N N 230 LYS CD HD3 sing N N 231 LYS CE NZ sing N N 232 LYS CE HE2 sing N N 233 LYS CE HE3 sing N N 234 LYS NZ HZ1 sing N N 235 LYS NZ HZ2 sing N N 236 LYS NZ HZ3 sing N N 237 LYS OXT HXT sing N N 238 MET N CA sing N N 239 MET N H sing N N 240 MET N H2 sing N N 241 MET CA C sing N N 242 MET CA CB sing N N 243 MET CA HA sing N N 244 MET C O doub N N 245 MET C OXT sing N N 246 MET CB CG sing N N 247 MET CB HB2 sing N N 248 MET CB HB3 sing N N 249 MET CG SD sing N N 250 MET CG HG2 sing N N 251 MET CG HG3 sing N N 252 MET SD CE sing N N 253 MET CE HE1 sing N N 254 MET CE HE2 sing N N 255 MET CE HE3 sing N N 256 MET OXT HXT sing N N 257 PHE N CA sing N N 258 PHE N H sing N N 259 PHE N H2 sing N N 260 PHE CA C sing N N 261 PHE CA CB sing N N 262 PHE CA HA sing N N 263 PHE C O doub N N 264 PHE C OXT sing N N 265 PHE CB CG sing N N 266 PHE CB HB2 sing N N 267 PHE CB HB3 sing N N 268 PHE CG CD1 doub Y N 269 PHE CG CD2 sing Y N 270 PHE CD1 CE1 sing Y N 271 PHE CD1 HD1 sing N N 272 PHE CD2 CE2 doub Y N 273 PHE CD2 HD2 sing N N 274 PHE CE1 CZ doub Y N 275 PHE CE1 HE1 sing N N 276 PHE CE2 CZ sing Y N 277 PHE CE2 HE2 sing N N 278 PHE CZ HZ sing N N 279 PHE OXT HXT sing N N 280 PRO N CA sing N N 281 PRO N CD sing N N 282 PRO N H sing N N 283 PRO CA C sing N N 284 PRO CA CB sing N N 285 PRO CA HA sing N N 286 PRO C O doub N N 287 PRO C OXT sing N N 288 PRO CB CG sing N N 289 PRO CB HB2 sing N N 290 PRO CB HB3 sing N N 291 PRO CG CD sing N N 292 PRO CG HG2 sing N N 293 PRO CG HG3 sing N N 294 PRO CD HD2 sing N N 295 PRO CD HD3 sing N N 296 PRO OXT HXT sing N N 297 SER N CA sing N N 298 SER N H sing N N 299 SER N H2 sing N N 300 SER CA C sing N N 301 SER CA CB sing N N 302 SER CA HA sing N N 303 SER C O doub N N 304 SER C OXT sing N N 305 SER CB OG sing N N 306 SER CB HB2 sing N N 307 SER CB HB3 sing N N 308 SER OG HG sing N N 309 SER OXT HXT sing N N 310 THR N CA sing N N 311 THR N H sing N N 312 THR N H2 sing N N 313 THR CA C sing N N 314 THR CA CB sing N N 315 THR CA HA sing N N 316 THR C O doub N N 317 THR C OXT sing N N 318 THR CB OG1 sing N N 319 THR CB CG2 sing N N 320 THR CB HB sing N N 321 THR OG1 HG1 sing N N 322 THR CG2 HG21 sing N N 323 THR CG2 HG22 sing N N 324 THR CG2 HG23 sing N N 325 THR OXT HXT sing N N 326 TRP N CA sing N N 327 TRP N H sing N N 328 TRP N H2 sing N N 329 TRP CA C sing N N 330 TRP CA CB sing N N 331 TRP CA HA sing N N 332 TRP C O doub N N 333 TRP C OXT sing N N 334 TRP CB CG sing N N 335 TRP CB HB2 sing N N 336 TRP CB HB3 sing N N 337 TRP CG CD1 doub Y N 338 TRP CG CD2 sing Y N 339 TRP CD1 NE1 sing Y N 340 TRP CD1 HD1 sing N N 341 TRP CD2 CE2 doub Y N 342 TRP CD2 CE3 sing Y N 343 TRP NE1 CE2 sing Y N 344 TRP NE1 HE1 sing N N 345 TRP CE2 CZ2 sing Y N 346 TRP CE3 CZ3 doub Y N 347 TRP CE3 HE3 sing N N 348 TRP CZ2 CH2 doub Y N 349 TRP CZ2 HZ2 sing N N 350 TRP CZ3 CH2 sing Y N 351 TRP CZ3 HZ3 sing N N 352 TRP CH2 HH2 sing N N 353 TRP OXT HXT sing N N 354 TYR N CA sing N N 355 TYR N H sing N N 356 TYR N H2 sing N N 357 TYR CA C sing N N 358 TYR CA CB sing N N 359 TYR CA HA sing N N 360 TYR C O doub N N 361 TYR C OXT sing N N 362 TYR CB CG sing N N 363 TYR CB HB2 sing N N 364 TYR CB HB3 sing N N 365 TYR CG CD1 doub Y N 366 TYR CG CD2 sing Y N 367 TYR CD1 CE1 sing Y N 368 TYR CD1 HD1 sing N N 369 TYR CD2 CE2 doub Y N 370 TYR CD2 HD2 sing N N 371 TYR CE1 CZ doub Y N 372 TYR CE1 HE1 sing N N 373 TYR CE2 CZ sing Y N 374 TYR CE2 HE2 sing N N 375 TYR CZ OH sing N N 376 TYR OH HH sing N N 377 TYR OXT HXT sing N N 378 VAL N CA sing N N 379 VAL N H sing N N 380 VAL N H2 sing N N 381 VAL CA C sing N N 382 VAL CA CB sing N N 383 VAL CA HA sing N N 384 VAL C O doub N N 385 VAL C OXT sing N N 386 VAL CB CG1 sing N N 387 VAL CB CG2 sing N N 388 VAL CB HB sing N N 389 VAL CG1 HG11 sing N N 390 VAL CG1 HG12 sing N N 391 VAL CG1 HG13 sing N N 392 VAL CG2 HG21 sing N N 393 VAL CG2 HG22 sing N N 394 VAL CG2 HG23 sing N N 395 VAL OXT HXT sing N N 396 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Chinese Ministry of Science and Technology' China 2012CB917200 1 'Chinese Ministry of Science and Technology' China 2011CBA00800 2 'Chinese National Natural Science Foundation' China 31130018 3 'Chinese National Natural Science Foundation' China 31170726 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FE (III) ION' FE 3 '2-OXOGLUTARIC ACID' AKG 4 'ACETATE ION' ACT 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3THP _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #